>input_sequence_21959
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-------------------------------------------ATGCATGCAAGGACCAGTCGAGCACGTACGAAAGTGA
CAATGGAGGACGCTGGTGGTAGTACTGCACGAAGGCAGCCTTCACTCTCCGTCAACGCCTCAAGAGCGCCGTCCGGCGAC
TGGCCGCCGGCGGATGAGGGGCCGGTGAGCCCTACAGGGAGGCTCATGGACGGCTTCTACATCGTCGTCAGCATGGGGCT
TGGGGTGCCCCTAAACTTCCCCGTCCTCCGCGCCGGCATCGAGACCCAGCTCGCGCGACACCCGCGGTTCCACAGCATCC
AGGTGACCAAAGATGGCAAGCCACCACGGTGGGTGCACGCGTCGGCGTTGAACTTGGATGACCACATCACCACCCCACTG
CTGGACGGCGCCGCCGTGGCGTCCGACCCTGATAAGGCCGTGGAGGACTACGTGGCCTCGCTGTCCACGGCGCCCATGGA
CCGCTCCCGGCCGCTCTGGGAGCTCCACTTCCTCAACTACCCGACCACCGAGGCGGCGTCCACCGTGGTGATCCGTGTGC
ATCACTCCCTCGGCGACGGCATGTCGCTGCTCACCCTCCTCATGGCGTCCACGCGCAGCGCCGCCGACCCGTCGAGGCTC
CCGGCCATGCCGGCGCAGCCCGCTCGCTCCGGATCCATCTACGCGC---GACCGCGGCCCCCGTGGTCCGCAGGCACTCT
---GGCGTTCATCACGTGGGCTTGGTGGTACGTCGTGCTCGCGTGGCACACCGTGGTGGACGTGGCGCTCTTCGTCGCCA
CAATCATGTTCGTCAGGGACCCACAGACACTGTTCAAGCCTGCCGACGGCGGGGGCGGCGAGCTCCCCCGCCGCAAGCGC
TTCGTGCACCGGAGCCTTAGCCTCGACGACGTCAAGTTCCTGAAACATGCCATGAACTGCGTACGTACGTGCACCTTCAT
TCATCGATCGACTCCTATATATAGCAACATA-CTCCATTTTATCGTGTTTGCATGCGCAGACTGTGAACGAT--------
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---------------------------------GTGATAGTTGGAGTGACTTCCGCTGCTCTGTCGCGATACTATTTCCG
AAAATCTGGTAACTGCTCTTTCATGTACTATGATTTTCTTTTCCGAAGTATATACTACAGTATGGAATTTAGATATTATG
CTGCTAGCGCTATTACTGCCTCCGTCCTTTGATGATATCCTAAAAATGTGTAGTCAGATCTTTCTAACAACATATCCTCC
CTCTTTCTCTTAAAATATTATCATACTAATTTTGTGAATGTACTGATAAATATGAGAATGGCTAGATGTAATTTGCCTGA
TTTTCGAATTTGGGTCAGTCAATTGTTTTGGGACGTCGGATGCAGATCCAACCGCGGGCAGCCCTTCTTCTTCCTCCAGC
TCATCTCCTTCCTTCCAACCGCCCAGCAGAAGCCGGACTAACCGCCTGTTGCTGGCAACGCTCCCGCACCACCCTCCCCA
CAACTGCGGCCCACCGTCATGTTGCCCTCCGCCTGACCGCCTCCTGCCCTCCCCCCCCCGCCATCCCTCTAGCCCCGACG
CTGACAGAGATT--------------------------------------------------------------------
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-----------------------------------------------------------TTCTCTGGCAAAGTTGCACCA
CCATTGTGCTGCCACACCCCCACCCTAAGATAGATGTTGGGATAGCCCTCCGGCGAGCTTGTTCCTTCTCCTTCCTTCCC
TC-----------CGGCGAACTTCAAAAGAGATTGACCCAAAACCAAAAGTCTTGTCGACTGACATCTAGCTATTGTGGA
TCAATATAATAATAGTTAGAATAGATGAAAAGTATGAGTAGATGTCTTCTTCACACAAGAAAAATCTATCACGGAATATG
TTTTTATCGTGTGTTTATTCGTTAGTATGTATAATGATTTTTTTTCTACTACATCCTTTATATGTTATAAGGTACATTTT
CTTTCCAAAAGTAAAACACTTGTATCTTGGATCAAGTTTATAGAAAAACAATCAACATCTGTTATACTGAATCATATTGA
TTTTAATAGATGCATCATGAAACATA----------TATTCATATCTGGTTTATTTAGTAGTGTAGTTATTTTTTAAACT
TGGTCAAAGATCAAAAGTTTGGACTTTAGGAAAAAACAATAAATCTTATAAAATGTAACCGAGGGATTATTAATTTGGAC
AAAGTTGAACATGGTTTTCTAGGATTTTTTT-AGATTCCGTCAATCTAGGGAGTAAGATATATATTAAGATTAGTAAACC
AGAAATTGTATAATTAGGAGTAATATAATATATAAATTTACTAACTATCCGCTATCTCTTCCATATTTGTTAGGTGACAC
TAATACCAAAATTATATGTTTGCGATCGATCCTCCTTGTGAACATGAGGCCAACCAGTGGCCTACAGGTAAAACTTTTTT
TGGCCAAGGAATGTCTATTTGTAAGACATACAGAAACATGCTCGGTCCTCAACACTTTTATTTTGTAGTGTATCAGTATT
TAATTCTTTTACCATTCTGAGCAGGAATATGTCAATATGATGGAGTCTGGTAAGAGTAACGATATGACACGGAGAAATCA
ACTTGGCTACATAATCCTACCATTTCAGATTGCTGTGCACAAAGATCCACTTGAATATATTCGCAAGGCCAAAAAGATTG
TTGATAGGAAGAAAAGCTCACTGGAAGTGATGTTCACGCATATGCTTGCCGAAGTTATAATCAAAACTCTTGGTGTGAAG
GTATAACGATTTGCTGGTCCTTTAGTTTGTACTTGTATACTGTTGTCTGTAGAATATGTTTTTCAAAAAGGAGAGCAAGC
ATTTAATTAACAAACCAATTAATTAATGTGATTTTCTAAACAAATTAATTAACAATTTTTAATCTAATTCAGTTCCATGA
TTGTCAATCCAAGTAGGCAGCAGGTGTTATTTTCCACCGTATGATATCACACACGACCATATCATTTTCGAACATGATTG
GGCCAGCAGAGCAGGTAGAGTTCTATGGGCACCCAGTTGTCTCCATTGCACCTAGCGTCTACGGCCCGCCAGAAGTAAGT
AGTCGCAGTCCAGCCATAATCTCACATTACAAAGTCTACTCTTAAGTCGTTCTCAGAAAGAAAAGAGAATTACTATAGTA
GTGGAATTTACTTGTGTGAGTTTAAAAAAAAAAGAATTTACTTGTGTGTACTCCCTTTGGTACCTAATGGAGATTAATGC
TTCCTGTGTGCATAGGCTCTGACGGTGCACTACCAGAGTTATAGTAACACCATCAAGGTAATTCTAGCTGTTGATGAGGC
ACACTTTCCAGATCATGGTCAACTTTTGGATGACTTCACCGAGTCCCTTAGGATCATCAAGGATGAGGCTTCAAGATTGT
AA------------------------------------------------------------------------------
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-------------------------------------------------
>chr1D_1_TraesCS1D01G029300
TGCACGTCACGTAACACAACAAGCTCGCTTGATGGAGTTAATGTGTAAGCATACTAATATAGTATGTGTACATGTCGTGT
CAGGCTATAATTGTAATTGGTCGTACATATTCACACTAGAGCCGGGTCGGATCCTGCAGTCTGGGTACACTGGTGGGTGG
GGGGCGAGATGAAGGCGTGGCATTGGTCCTACATATTGACACTATGGATTGGTAAAGCGTGGCATTCAAGTTGTGTGTCG
GACTGTAGGTGGTTTGCAGTTGATACTGT---ATCAACGTAGTACATGGGGTGAGAAGTCCAAGCGCAATAATGCATGTG
CAACTAGAACATGTGGAACAGCCCGGTGTTTCGTCACTTGTCACATGGTCGTCAATGACTCCTCGACCA-GAGTGAACAG
TGGATGATATGTAGAGTGGAGCGATAGTAGTAGAATCTATCTTCAGTGCAGCTGGCTGGAATGCTAGCTGATACTATGTA
AACATCCGGGCACTCCAAACCCATCTCAAACGCCCGAACTGAGATATGTAAAAACCTTCACGACCGTGTTCCCACGGATT
CTATCGTGTGTTTGAAAACAAATGCTTTGCATATCCCATG--GAGAGGGCAAATCTTATTCACTCAAATGCTGTTTTTGT
GGGTGATTTTCTTTTGCCAGTGTGAACTCGCATAAGTCCTTGTCACTGGCAAGACCAAAGTTTTGGTCACTCGGTGGTAA
TTTTTTCGAAAGTACTAATAAAATTCAGACAAATTTAGCAAAAAGTATGCTTGAATGATCTACCCATGTGTAAATTTTCA
TGAAGAAGTGACATCTGTGGTGGTCTGAGAA-------------------------------------------------
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-----------------------------------AAAAAAACAGTGCTTCAAAATACTTTTAAAATAACATTTATTAAC
GGGACAGTGCAGTATGCATGTGTGGGGT----------------------------------------------------
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------------------AGCATTAGCATGTGCATTTTGCCCGGCCGCACGTGACGTGAGTCTTCCTGTCCTATTTATAG
GAACGGAGCGTACGTA---CAAAGTTAATTTCAGAGCCAACCGATGCATGCAAGGACCAGTCGAGCACGTACGAAAGTGA
CAATGGAGGACGCTGGTGGTAGTACTGCACGAAGGCAGCCTTCACTCTCCGTCAACGCCTCAAGAGCGCCGTCCGGCGAC
TGGCCGCCGGCGGATGAGGGGCCGGTGAGCCCTACAGGGAGGCTCATGGACGGCTTCTACATCGTCGTCAGCATGGGGCT
TGGGGTGCCCCTAAACTTCCCCGTCCTCCGCGCCGGCATCGAGACCCAGCTCGCGCGACACCCGCGGTTCCACAGCATCC
AGGTGACCAAAGATGGCAAGCCACCACGGTGGGTGCACGCGTCGGCGTTGAACTTGGATGACCACATCACCACCCCACTG
CTGGACGGCGCCGCCGTGGCGTCCGACCCTGATAAGGCCGTGGAGGACTACGTGGCCTCGCTGTCCACGGCGCCCATGGA
CCGCTCCCGGCCGCTCTGGGAGCTCCACTTCCTCAACTACCCGACCACCGAGGCGGCGTCCACCGTGGTGATCCGTGTGC
ATCACTCCCTCGGCGACGGCATGTCGCTGCTCACCCTCCTCATGGCGTCCACGCGCAGCGCCGCCGACCCGTCGAGGCTC
CCGGCCATGCCGGCGCAGCCCGCTCGCTCCGGATCCATCTACGCGC---GACCGCGGCCCCCGTGGTCCGCAGGCACTCT
---GGCGTTCATCACGTGGGCTTGGTGGTACGTCGTGCTCGCGTGGCACACCGTGGTGGACGTGGCGCTCTTCGTCGCCA
CAATCATGTTCGTCAGGGACCCACAGACACTGTTCAAGCCTGCCGACGGCGGGGGCGGCGAGCTCCCCCGCCGCAAGCGC
TTCGTGCACCGGAGCCTTAGCCTCGACGACGTCAAGTTCCTGAAACATGCCATGAACTGCGTACGTACGTGCACCTTCAT
TCATCGATCGACTCCTATATATAGCAACATA-CTCCATTTTATCGTGTTTGCATGCGCAGACTGTGAACGAT--------
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---------------------------------GTGATAGTTGGAGTGACTTCCGCTGCTCTGTCGCGATACTATTTCCG
AAAATCTGGTAACTGCTCTTTCATGTACTATGATTTTCTTTTCCGAAGTATATACTACAGTATGGAATTTAGATATTATG
CTGCTAGCGCTATTACTGCCTCCGTCCTTTGATGATATCCTAAAAATGTGTAGTCAGATCTTTCTAACAACATATCCTCC
CTCTTTCTCTTAAAATATTATCATACTAATTTTGTGAATGTACTGATAAATATGAGAATGGCTAGATGTAATTTGCCTGA
TTTTCGAATTTGGGTCAGTCAATTGTTTTGGGACGTCGGATGCAGATCCAACCGCGGGCAGCCCTTCTTCTTCCTCCAGC
TCATCTCCTTCCTTCCAACCGCCCAGCAGAAGCCGGACTAACCGCCTGTTGCTGGCAACGCTCCCGCACCACCCTCCCCA
CAACTGCGGCCCACCGTCATGTTGCCCTCCGCCTGACCGCCTCCTGCCCTCCCCCCCCCGCCATCCCTCTAGCCCCGACG
CTGACAGAGATT--------------------------------------------------------------------
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-----------------------------------------------------------TTCTCTGGCAAAGTTGCACCA
CCATTGTGCTGCCACACCCCCACCCTAAGATAGATGTTGGGATAGCCCTCCGGCGAGCTTGTTCCTTCTCCTTCCTTCCC
TC-----------CGGCGAACTTCAAAAGAGATTGACCCAAAACCAAAAGTCTTGTCGACTGACATCTAGCTATTGTGGA
TCAATATAATAATAGTTAGAATAGATGAAAAGTATGAGTAGATGTCTTCTTCACACAAGAAAAATCTATCACGGAATATG
TTTTTATCGTGTGTTTATTCGTTAGTATGTATAATGATTTTTTTTCTACTACATCCTTTATATGTTATAAGGTACATTTT
CTTTCCAAAAGTAAAACACTTGTATCTTGGATCAAGTTTATAGAAAAACAATCAACATCTGTTATACTGAATCATATTGA
TTTTAATAGATGCATCATGAAACATA----------TATTCATATCTGGTTTATTTAGTAGTGTAGTTATTTTTTAAACT
TGGTCAAAGATCAAAAGTTTGGACTTTAGGAAAAAACAATAAATCTTATAAAATGTAACCGAGGGATTATTAATTTGGAC
AAAGTTGAACATGGTTTTCTAGGATTTTTTT-AGATTCCGTCAATCTAGGGAGTAAGATATATATTAAGATTAGTAAACC
AGAAATTGTATAATTAGGAGTAATATAATATATAAATTTACTAACTATCCGCTATCTCTTCCATATTTGTTAGGTGACAC
TAATACCAAAATTATATGTTTGCGATCGATCCTCCTTGTGAACATGAGGCCAACCAGTGGCCTACAGGTAAAACTTTTTT
TGGCCAAGGAATGTCTATTTGTAAGACATACAGAAACATGCTCGGTCCTCAACACTTTTATTTTGTAGTGTATCAGTATT
TAATTCTTTTACCATTCTGAGCAGGAATATGTCAATATGATGGAGTCTGGTAAGAGTAACGATATGACACGGAGAAATCA
ACTTGGCTACATAATCCTACCATTTCAGATTGCTGTGCACAAAGATCCACTTGAATATATTCGCAAGGCCAAAAAGATTG
TTGATAGGAAGAAAAGCTCACTGGAAGTGATGTTCACGCATATGCTTGCCGAAGTTATAATCAAAACTCTTGGTGTGAAG
GTATAACGATTTGCTGGTCCTTTAGTTTGTACTTGTATACTGTTGTCTGTAGAATATGTTTTTCAAAAAGGAGAGCAAGC
ATTTAATTAACAAACCAATTAATTAATGTGATTTTCTAAACAAATTAATTAACAATTTTTAATCTAATTCAGTTCCATGA
TTGTCAATCCAAGTAGGCAGCAGGTGTTATTTTCCACCGTATGATATCACACACGACCATATCATTTTCGAACATGATTG
GGCCAGCAGAGCAGGTAGAGTTCTATGGGCACCCAGTTGTCTCCATTGCACCTAGCGTCTACGGCCCGCCAGAAGTAAGT
AGTCGCAGTCCAGCCATAATCTCACATTACAAAGTCTACTCTTAAGTCGTTCTCAGAAAGAAAAGAGAATTACTATAGTA
GTGGAATTTACTTGTGTGAGTTTAAAAAAAAAAGAATTTACTTGTGTGTACTCCCTTTGGTACCTAATGGAGATTAATGC
TTCCTGTGTGCATAGGCTCTGACGGTGCACTACCAGAGTTATAGTAACACCATCAAGGTAATTCTAGCTGTTGATGAGGC
ACACTTTCCAGATCATGGTCAACTTTTGGATGACTTCACCGAGTCCCTTAGGATCATCAAGGATGAGGCTTCAAGATTGT
AATGACAATCGAGGATGTAAGGGAAATTAATTGGATCGATCAGTGAACTACTTGAAGTCCTACACATGTGTACTGAATAA
ACACTATATAGGAGAATTTTGCTGGTGTCCATTAGAACAAAAAATTTGTATCAAGAACCAACAACATGTTTGTAAGGCGA
ACATGAAGAACAGAGGACAATTTTT-GCTTCGATTGAGCCAGGTACATACTACAGACTACATATATAGTAGACTTGAGAG
AAAATGCCAGTTTGCTACAAGGGTATTTCTGTGAATTTTTTATCTGAAATCATTAAGAAATATTTTACATAATA--AAAT
AGGGAAAATTATCAAAAA----ACTCAGTGTAATATGGGCAATGTGGACACCAGCAAAATCAACTATGTTCTACAAAGTA
GACTTTGAACGATTTCCGACACCGTATGCAAGTTGCGACACGTCCGGCCATTTATCGCCCTTTTTGACCGAGAAAACTCC
AAAAGATGCAAAATTTGTTGAAAACCAAGACAACTCGGCATGGTGCCTTGAATTGGTCATTCATTTGACGGATGTCGAGA
AAAAACGTGGTCTCAAACGGAGCCTTCTGGCCGACCCGGACACCTTACATTGAACATAGTAACTGATACTTTGAAGGAAA
ATGTATTTAAAATCATAATTTGAACAGGTACTTAAAACTGATACTTTGAGTTTTTAACATAACTAATAAATACATTGAAA
ATAGTAAATGATTTCTTTCAAAATCATTCAAAGAATATTTTATGGAAACAAATTAAAATCATTATTTAAAATAGTTAACT
AAAACTTGTATTTTGGTATTCAAAAAGGAGACAAATGAATTAAACAAAAAAAGCGAAACTGGAAAAATATAAAAGAAAAT
AAAACACTTAGGTCTGGGCCTAGCTAGGAGACGACATCGCTCCCGTAGGACATGTGTTGGGTGGCCCAAGCGCTCGCAGA
TTCGAAAAAGTTCTTCACTTTAAAAAAATATTCATGGATTTGAAATATT
>chr1A_110
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-----------------------------TTCACACTAGAGCCGGGTCGGATCCTGCAGTCTGGGTACGCTGGTGGGTGG
GGGGCGAGATAAAGGCGTGGCATTGGTCCTACATATTCACACTATGGATTGGTAAAGCGTGGCATTCAAGTTGTGTGTCG
GACTGTAGGTGGTTTGCGGTTGATACTGTATTATCAACGTAGTACATGGGGTGAAAAGTCCAAGCGCAATAATGCATGTG
CAACTAGAACATGTGGAACAGCCCGGTGTTTTGTCACTTGTCACATGGTCGCCAATGACTCCTCGACCATGAGTGGACAG
TGGATGACATGCAGAGTGGAGCGGTAGTAGTAGAATCTATCTTCAGTGCAGTTGGCTGGAATGCTAGCTGATA-TATGTA
AACATCCGGGCACTCCAAACCGACCTCAAACGTCCGGACTGAGATATGTAAAAACCTTCACCACCGTGTTCCTACAGATT
CTATCGTGTGTTTGAAGACAAATGCTTTGCATATCCCATGGAGAGAGGGCAAATCTTATTCACTCAAATGTTG-TTTTGT
GGGTGATTTTCTTTTGCCAGTGTGAACTCACATAAGTCCTTGTCACTGGAAAGACCAAAGTTTTGGTCAATCGGTTGTAA
TTTTTTCAAAAATAGTAATTAAATTCTACAAAATTTGGCAAAAAGTAGCTTGAA--------------------------
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>chr1A_767
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----------------------------------------------------GAATGATCTACCCATGTGTAAATTTTCA
TGAAGAAGTGACATATGTGGTGGTCTTAGTCTTGACATATAAATGTACTGTTTAGTCTCTTTCATTAGATCGGTCTTTTG
GTTGCATTAACTAGAGCATACACTTCTACATGATATCAGATACAAGAGGTCTTGTGTTCAGACCCGACTGACACAATTAA
ATTGCAACCCACTTTCACTCCATATTTGGGCCTGACGTATAAATATATTGTCTAGTCTTTTTCATTAGATCGGTCTTTTG
ATTACGTTGGATAGAGCATGCTCTTCTACACTGAGAAAAAAACAGTGCTTCAAAATA-----------ACATTTATTAAC
GGGACAGTGTAGTACGGTTGTATCATGCATTCCAACTAAGCAATCTTGATGATGTGTCATAGAATTAAATGAAAAAAGAG
AAGCTTGAGTATCATATCATGATACCGTATCATATTAAATGATGTGCTACTTTATGTCATGCATGTCAATAAATATAATC
AACTATGATATCAACATATGATGCTATGCATTACGGATGTAGTACATATACTAATATCGTATGCATGGTGCTAGTATATG
ATACTCCCCATTGCAACCAGCCTTAGCAAGTGCATTTTGCCCGGGCGCACGTC-----AGTCTTCCTGTCCTATTTATAG
GAACCGAGCGTACATAGTACAAAATTAATTTCAGAGCCGACCGATGCATGCAAGGACCAATCGAGCGCGTACGAAAGTGA
AAATGGAGGACGCTGGTGGTAGTACTGCACGAAGGCAGCCTTCACTCTCCATCAACGCCTCAAGAGCAACGTCCGGCGAC
TGGCCGCCGGCGGATGAGGGGCCGGTGAGCCCTACCGGGAGGCTGATGGACGGCTTCTACATCGTCGTCAGCATGGGGCT
TGGGGTGCCCCTAAACATCCCCGTCCTCCGCGGCGGCATCGAGACCCAGCTCGCGCGACACCCGCGGTTCCACAGCATCC
AGGTGACCAAAGACGGCAAGCCACCACGGTGGGTGCACGCGTCGGCGTTGAACTTGGATGACACATCACCT-CCCCACTG
CTGGACGGCGCCGCCGTGGCGTCCGACCCGGATAAGGCCGTGGAGGACTACGTGGCCTCGCTGTCCACGGCGCCCATGGA
CCGCTCCCGGCCGCTCTGGGAGCTCCACTTCCTCAACTACCCGACCACTGAGGCGACGTCCACCGTGGTGATCCGTGTGC
ATCACTCCCTCGGCGACGGCATGTCGCTGCTCACCCTCCTCATGGCGTCCCCGCGCAGCGCCGCCGACCCGTCGAGGCTG
CCGGCCATGCCGGCGCTGCCCGCTCGCTCTGGCGCCATCTACGCGC---GACAGCGGCCCCCGTGGTCTGCAGGCGCTCT
---GGCGTTCGTCACGTGGGCTTGGTCGTATGCCATGCTCGCGTGGCACACCGTGGTGGACGTGACGCTCTTCGTCGCCA
CAATCATGTTCGTCAGGGACCCACAGACACTGTTCAAGCCTGCCGACGGCGGCGGCGGCGAGCTCCCCCGCCGCAAGCGC
TTCGTGCACCGGAGCCTTAGCCTCGACGACGTCAAGCTCCTGAAACATGCCATGAACTGCGTACGTACGTGCACCG----
TCATCGATCGATTCCTATATATAGCAACATCTCTCCATTTTATCGTGTTTGCATGTGCAGACTGTGAACGATGTGATAGT
CAAAGTTTTAAATAGCGCGCTAAGCATCTTAGCGCCGGACCTCTTTCAAATGCTATAGCGTGCTATAACGGAGCTATAGC
GCGCTATTTAAAATGTTTGTTCATTTGTTTGGACCAAAATCTCTTAGCGCAAGACCTTTTGTAAACGCTATAGCGTGCTA
TAGCGGAGCTATAGCGGGCTATTTGAAACAGTGGTGATAGTTGGAGTGACTTCCGCTGCTCTGTCGCGATACTATTTCCG
AAAATCTGGTAACTGCTCTTTCATGTACTATGATTTTCTTTTCCGAAGTATATACTACAGTATAGAATTTAGATATTATG
CTGCTAGCGCTATTACTGCCTCCGTCCTTTGATGATATCCTAAAAATGTGTAGTCAGATCTTTGTAACAACATATCCTCT
CTCTTTCTCTTACAATAATATCATACTAATTTTGTGAATGTACTGATAAATATGAGAATGGCTAGATGTAATTTGCCTGA
TTTTCGAATTTGGGTCAGCCAATTGTTTTGGGACATCGGATGCAGATCCAACCATGGGCAATTCTTCTTCTTCCTCCAGC
TCATCTCCTTCCTTCAAACCGCCCAGCCGAAGCCGGACTAACCGCATGTTGCCGGCGACGCTCCCGCACCGTCCTCCCCA
CAACTGCGGCCCACCGTCATGCTGCCCT--------CCGCCTCCTGCCCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCCGGCAAAGTTGCACCA
CCATTGTGCTGCCACACCCCCACCCTAAGATAGATGTTGGGGTAGCCCTCCGGCGAGCTTGTTCCTTCTCCTTCCTTCCC
TCAGGCCTTCCTCCGGCGAACTTCAAAAGAGACTGACCCAAAACCAAAAGTCTTGTCGACTGACATCTAGCTATTGTGGG
TCAATATAATAATATTTACAATAGACAAAAATTATGAGTAGATGTCCTCTTCACACAAGAAAAATCTATCATGGAATATG
TTTTTATTGCGTGTTTATTCGTTAGTATGTATAATGATTTTTTT-CTACTACATCCTTTATATGTTATAAGGTACATTTT
CTTTCCAAAAGTAAAACACTTGTATCTTGGATCAAGTTTATAGAAAAACAATCAACATCTGTTATACTGAATCATATTGA
TTTTAATAGATGCATCATGAAACAATCAACATCTGTTATTCATATCTGGTTTATTTAGTAGTGTAGTTATTTTTTAAACT
TGGTCAAAGATCAAAAGTTTGGACTTTAGGAAAAAACAATAAATCTTATAAAATGTAACCGAGGGATTATTAATTTTGAC
AAAGTTGAACATGGTTTTCTAGGATTTTTTTTAGATTCCATCAATCTAGGGAGTAAGATATATATTAAGATTAGTAAACC
AGAAATTGTATAATTAGGAGTAATATAATATATACATTTACTAACTATCCGCTATCTCTTCCATATTTGTTAGGTGACAC
TAATACCAAAATTATATGTTTGCGATCGATCCTCCTTGTGAACATCAGGCCAACTAGTAGCCTACAGGTAAAACTTTTTT
TGGCCAAGGAATGTCTATTTGTAAGACATACAGAAACATGCTCGGTCCTCAGCACTTTTATTTTGTAGTGTATCAGTATT
TAATTCTTTTACCGTTCTGAGCAGGAATATGTCAATATGATGGAGTCTGGTAAGAGCAACGATGTGACACGGAGAAATCA
ACTTGGCTACATAATCCTACCATTTCAGATTGTTGTGCACAAAGATCCACTTGAATATATTCACAAGGCCAAAAAGATTG
CTGATAGGAAGAAAAGCTCACTGGAAGTGATGTTTACGCATATGCTTGCCGAAGTTATAATCAAAACTCTTGGTGTGAAG
GTATAACGATTTGCTGGTCCTTTAGTTT----------------------------------------------------
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>chr5B_1284
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------CCAATGGTGGCAAC---CCGCGGTGGGTGCGCA---CGGTGGTGAACGTGGACGACCACACGATAATCCCGACA
CTGGATCCTGCGGCCGTAGCGGCCGACCCGGACCGGGCAGTGGAGGACTACATGGCCTCGCTGCCGGCGCTCCCCATGGA
CCGCTCCCGGCCGCTCTGGGAGTTCCACTTCCTCGACTTCCCGGCCTCCGAGGCCACCTGCACCGCCGTGATCCGCGTGC
ACCACTCCCTCGGCGACGGCACGACGCTCATCGCGCTCCTCCTGGCGTCCGCGCGCAGCGCCGCCGACCCGACGCGCCTG
CCGGCCATGCCGGAGCAGCCGGCGCGCACGGGCGCCATCTACGCGCCGCGGCCACGGTCCAAGGGGGGTGTC------CT
---GGCGTTCGTCGCGTGGGCCTGGTCGTATCTTGTGCTCGCGTGGAACACCGTGGTGGACGTCACCCTCTTCGCCGCGA
CGGTTGCGTTCCTGAGCGACCCGCACACGCCGTTCAAGTACGTGGATCACGGCACTGCGTCCAGCT---CCCGGCGGCGC
TTCGTGCACCGGAGTCTTCCTTTGGAGGACGTTAAGTTCATCAAGAACGCCATGAACTGCGTAAGTAC------------
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>chr5B_1320
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------------------------------------------CGGAGGTGAACGTCGACGACCACATGATCGTCCCGACG
CTGGACCCCGCCGCCGTGGAGGCTGACCCGGACCGGGCCGTGGAGGACTACGTGGCCTCGCTGCAGGCGCTCCCCATGGA
TTGCTCCCGCCCGCTCTGGGAGTTCCACTTCCTCGACTTCCCGACCTCAGAGGCCACCTCCACCGTGGTGTTCCGCGTCC
ACCACTCCCTCGGTGACGGGATGTCGCTGATCACGCTCCTCCTGGCGTCTGCCCGCAGCGCCGCGGACCCGACACGCCTG
CCGGCCATGCCGGAGCAGCCGGCGCGCACGGGCGCCATCTACGAGCCGCGGCACCGGCAGCCGCTGCCCTCGGGCGCCCT
GGCGGCGTTCGTCGCATGGGTCTGGCCGTATCTTGCGCTTGCATGGAACACCGTGGTGGACGTCATCTTCTTTGCTGCGA
CGATTGTGTTTCTGAGAGACCCGAACACACTCTTCAGACGCGGGGACAGTCAAGTTACGTTGAA---CCCCCGCAGGCGC
TTCGTGCACCGGAGCTTTAGCTTGGACGACGTCAAGTTCATCAAGAATGCCATGAACTGCGTAAGTA-------------
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>chrUn_1326
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------------------------------------------------TGAACGTCGACGACCACATGATCGTCCCGACG
CTGGACCCCGCCGCCGTGGAGGCTGACCCGGACCGGGCCGTGGAGGACTACGTGGCCTCGCTGCAGGCACTCCCCATGGA
TTGCTCCCGCCCGCTCTGGGAGTTCCACTTCCTCGACTTCCCGACCTCAGAGGCCACCTCCACCGTGGTGTTCCGCGTCC
ACCACTCCCTCGGTGACGGGATGTCGCTGATCACGCTCCTCCTGGCGTCTGCCCGCAGCGCCGCGGACCCGACACGCCTG
CCGGCCATGCCGGAGCAGCCGGCGCGCACGGGCGCCATCTACGAGCCGCGGCACCGGCAGCCGCTGCCCTCGGGCGCCCT
GGCGGCGTTCGTCGCATGGGTTTGGCCGTATCTTGCGCTTGCATGGAACACCGTGGTGGACGTCATCTTCTTTGCTGCGA
CGATTGTGTTTCTGAGAGACCCGAACACACTCTTCAGACGCGGGGACAGTCAAGTTACGTTGAA---CCCCCGCAGGCGC
TTCGTGCACCGGAGCTTTAGCTTGGACGACGTCAAGTTCATCAAGAATGCCATGAACTGCGTAAGTA-------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr1A_3665
--------------------------------------------------------------------------------
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------------------------GTTTGTACTTGTATACGGTTGTCTGTAGAATATGTTTTTCAAAAAGGAGAGCAAGC
ATCTAATTAACAAACTAACTAATTAATGTGATTTTCTAATCAAACATATTAACAATTATTAATCCAATTCAGTTCCATGG
TTGTCAATCCAAGTAGGCTGCAGGTGTTATTTTCCACCGTATGATATCACACACGACCATATCATTTTCGAACATGATTG
GGCCAGCAAAGCAGGTAGAGTTCTATGGGCACCCAGTTGTCTCCATTGCGCCTAGCGTCTACGGTCCGCCAGAAGTAAGT
AGTCGCAGTCCAGCCATAATCTCACATTACAAAGTCTACTCTTAAGTCGCTCTCAGAAAGAAAAGAGAAGTACTATAGTA
GTAGAATTTACTTT------------------------------TGTGTACTCCCTTTGGTACCTAATGGAGATTAATGC
TTCCTGTGTGCATAGGCTCTGACGGTGCACTACCAGAGTTACAGTAACACCATCAAGGTAATTCTAGCTGTTGATGAGGC
ACACTTTCCAGATCATGGTCAACTTTTGGATGACTTCACCGAGTCCCTTAGGATCATCAAGGATGAGGCTTCAAGAATTT
AATGACAATCGATGATGGAAGGGGAATTAATTGGATCGATCAGCGAACCACTTTAAGTCCTACACATGTGTACTTAATAA
GCAC---ATAGGAGAATTTTGCTGGTGTCCATTCAAACGGATTGTTCGTACCAAAAACCAGCAACATATTTGTAAGGCGA
ACATAAAGAACAGAGGATAAATTTTGGCTTCGATTGAGCCAGGTACATACTACAGACTACATA----GTAGACTTGAGAG
AAATTGCCAGTTTGCTACAAGGGTATTTTTGTAAAA-TTTTATCTGAAATGATTAAGAAATACTTTATTACATAAGAAAT
AGGGAAAATTATCAAAAAGAAAACTCAGTGTAATATGGG-----------------------------------------
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-------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------S-----------
----------S--------------------------S------------------------------------------
-----------------S------------------------------------S-------------------------
-------------------------------S-------------------S-----------------------S----
-------S---S-----------S---------------------------S---------------------S------
---------------------S-S--------S---S------------------------S----------S--S----
----------------S-----------------------------------------------------S--S------
-----------------------------S-------------------S-------------------S-----S----
-------S---S--S----S------SSSS------S----------SSS-S----------------------------
--------------S-----------S--SS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSSSSSSSSS------------
---------S----S-SS---S-SSS-S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S------S---------------S-------SSSSSS----------------------
----S--------S---------S--------------S--------------------S------S-------------
S-------------------------------------------------S----------------SS-----------
-----------------------------------S--------S-----------------------------------
----------------S---------------S-----------------------------------------------
-------------------------------------------------------------------S------------
-----------------------------S--------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------S----------------------------S
-----------------------------S--SS-----------------------------------------S----
----------S---------------S---S---------------------------------S---------------
----------------------------------------------------S---------------------------
---------------------------------------------------------------------------SSSSS
-----------S------------------S------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
---------------------------------------------------------------S---------------S
------------S----S--------------------------------------------------------------
------------------S---------------S------------------SS-----SSS-----------------
---------------S-----------S-----------------S------S---S-------------SS--------
---------------------S------SSSSSSSS-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-----------------------------------------S--------------------------------------
--------------------------------S----------------------------------------------S
--------------S---S------SS----S--------------S------------------------S--------
-------S-S----------------------------------S-----------------------------------
--------------------------------------------------------------------------------
------------------------SS------------------------------------------------------
----------------------------------------------------------------------------S---
---------------------------------------S----------------------------------------
----------------------------------S---------------------------------------------
---------------------------------------------S--------S---S---------------------
---------------------------------------------------S----------------------------
-------------S------------------------------------------S------S----------------
--------------------------------S-----------------------------S-----------------
S---------------------------------S---------------------------------------------
----------------------------------------S---------------------------------------
--S------------S--S--------------------S----SSS----------S------S--------------S
------------------S-------------------------------------------------------------
--------S----------------------------------------S--------------S---------------
-------------------------------------------------S-------------------S----------
--S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------------------------------------------S-S-
------------S----S-----S-------------------S----S----S--------------------S-----
S---SSS--------------------------SS---SS-SSS--S---S---S-----S------S------------
----S------------S--S------------------------------------------SSSS-------------
---S------------------------S---S--SS-------------S-----------S----SSSS---------
---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CG
GACTGTAGGTGGTTTGCA--------------------------------------------------------------
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-------------------------------------------------
>reverse_1870
--------------------------------------------------------------------------------
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-----------------------------TGATAAGGCCGTGGAGGACT-------------------------------
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-------------------------------------------------
>forward_396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGACTCCTCGACCAGAGTGA----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_3021
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------GCCCTTCTTCTTCCTCCAGC
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_2399
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CGTACGTACGTGCACCTTCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_4889
--------------------------------------------------------------------------------
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--------GAGCAGGTAGAGTTCTATGGGC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_4299
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------GAACATGAGGCCAACCAGTG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_5686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----TGAACGATTTCCGACACCGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
