>input_sequence_21923
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------------------------------------------------------------------ATGGAGTCGTCAGC
TGACGAGCATGCCATGGAGAGTGATACTGAGACTGAAAGTGATCTGATCAGCGAGCTGCCTGAAGACATCCTCCAGAAAA
TCCTGTCTTGCGTGTGGATTAGAACTGTTGTTCGCATGCGCAGGGTGTCTAGGAAGTGGATGGAACTGTGTGAAAGCCTG
CAGTTCATACGCCTTGATTACAGAGATTTCGAACATTGGAAGGTCGAGAAGTTTACTCGTTTTGTTAACAACCTATTGCT
TGTCCGTCGGAAAGTAGACTTGCAAACATTCCAGCTGCATTGGAATCCTCATGGTCCCCTGAACTGCAATGATGTCAGAA
TGTGGATTGGCTATGCGGTGAAGCATAATGTTAAAGTGCTTGACGTGAAACTTTGTCTATATGATAAGACTGTTTTACCT
CCTGCCATTTTCACCTGCCGCTCGCTTCAGGAGCTAAATTTGCAGTGGGGTAATGCTCCCTACCGAGATTATGACCACAC
GGGACTTGTACTGCCTGACATAATCAATCTTCCTTCTCTCAAGAAACTTACTCTGCGCGACGTGGAAGTGGATGAGCTTT
CTCTGAACAGATTCATTGCCTGGAGCCCTGGCCTAGAAGACTTGAATTTGATAGACTCTGCGATGCATCTTGATCTCATA
GCCTCAAAAGCATTAAAAAGGCTAACCCTTGATGGCTTCCTAGATGAGTGCGATGGATTCACAATTGCTGCCCCTCATCT
CATTAGCTTTGAGTGCACGGGATGTTCACTGGAAGCTATTTCCTGGAGAGACCAGCCATCTCTAGAGAGCGCACGCATAG
ATACTTGTGGGTATACATTTGATTGTGAATCAAAGTTCACTGGAGTTCTTAAGTATGCCAAGAAGCTTGCATTATTTGGT
TCTGACATAAAGGTATGGCTTTTGAAAAGACAAGCCTGCGGTTCTATCTGTTGTTTTTTATCTTTA---TTTTTGCTAGA
ACACACATTCTTTTATTATTCTTGTTAAACTATATAAAAAATGAATTATAAAACTTCTTACATTATTCAACCGTTGCTGT
TGTTTGTAGTCGTTAATGTAAAATTTATTACTACCATGTTTCCAGAACAAAATGGAAGTAAACAAAGTAGTTTTACTTAA
TAGTTGAAACACTTCTGCTGCAACAAAAAGGTAAAATCTAAGTGCTGGTGCTCAATGATTTGGGTGTACATTTTGTTATA
TTCTTGCTGCTAAAGTGGATCTGATCATTTTGAATGCAAAACCTAATATCCATGACTTCATCATATTGCTCCATTAACTT
TGAATTAGTACTAATATTTAGAGCATCTCTAGCAGATCCCGTAAAAACACCACCTGT-AAAAACAGTTTACAGGTCCCCT
TATAACGAATTTACGGTACCGCGGGGCATCGGGCGGAACAGATCCCATAAACCCGTACAATAAAAGTTTTTTT-CTTTGT
TTTCTCCTCACGCTTCTTCCCC-----GACGCACGCATGGACGGACTCGAACTCCGGCCGGCTGGAACGGCGCCGCTCCG
GCCTGCCGCCTACTCCGGCGCCGCTCTGGCCTGCTGCCTGCTCCAGCGACTTTCCGTCGATGCTCCGTCCCGCCGCATGC
TCTGGCGATGCTCCGGCCAGCCGCTGCCGAGCTCCTCCGCCTGCTCGCTGCTCGCACGCGGCGTTGCCAGGCCCCCTGCT
CCAGTGTTGACCGGTTTTATGGGATCCTCAAAAAACGGTTTGAATCCTCCAAATATGACAGATGGTTGCTCTAATATACG
GGAACCTGT-AAAAAA---ATATGGGGTATGCTATTTTACAGGATCTATTCGGTGTTTTTTTT-CCAACCTGTACAGTAA
ATCTGAAGGTTTGACCGTTTTTACTGGATCTGCTAG-GATGCTCTTATGTTGGTCTAAATTCTAACAAACAACTATTGGA
GTTGGTTCAATATTTTTCTATACTGATCTGTTCCACAATTTGATTTTCTTACCTTTGTTATGTCCATCAAAATAGAGCAC
ACTTTCAGTAGAAGTAAAAGTGGATCAGATATGATGGAAGCATTCAGAGTGTGAAACCTGGATAAAAGGGCAACCTGGTG
CATGTAGCTCCCGCTTGCGCAGGGTCCAGGGAAGGGTCCGACCACTTTGGGTCTATAGTACGCAGCCTTTCCCTACATTT
CTGTAAGAGGCTGTTTCCAGGACTTGAACCTGGATATGAAATTTAATTCTGTTTGATATGGATACTTTTAAGCTTTAACC
ACTTAGTTACGTGCTGTGCATAAGCAGATGGAAGAGAAAAAAAATGA-GCTTGAGACATTGTGTTTGATAAGCTTACATA
TTTTCTCAACTGTAACAAAATTGGCAGTTTTCGTTTTTTATGAGCTTACACTTAGTTATTTGGGAGGCTTTAACCACTTG
CATGTTTTCTCAACTGTAACAAAATTCACAATTTTCGTAGTGGGAAATTTGGTCTGTTGACTTCTTATAGCTGAATATCA
ATTATCAATTATGATGCAACAGTTTTGTATTGCTACATTTTCATGATGTCTTGTCTTGTATTGCTACATTTTCATGATGC
AACAATTTTGATGTTTGCACTCTTTCGTTCAAGTTAATGATACGGTGTTATCGGTATTGTAGTTGCTTTAGGTTTGTCCT
AGTCATAACTCACTCGCTCACTCAATGCAAGGTTATGTTGGAAAAGGAGCTGCCAACATGTTCAGCGTTTGAAAGCCTCA
CAACTCTTGAGATTGGCGAATGGTTTTTAACTGAGGACTTGTACGTTGTGCTTCGCTTCCTCCAGCTTTCACCGAGGCTA
GAAGAACTCACTTTGATGCATAGGCCGGTATGCTGCATGTAATATCTATTGCATTTATTATATTGAGAAGTTTTGCTAAA
ATATATCCTCTCCTTTTGTTTTCTGTTTATCTCTAGCTTGATGAAGGAGCGGAAATAGATTGCATGCCAATTGACGGGAT
GACCTTCCAGTGTCCACTCCTTGAAAGTGTTGTCATACAATGTTCAGAGGGTGATGGAAGAATCGATAAGCTGCTAAGTG
TTCTGGTAGTCAATGGGATTAGTCTAGACAATATAAATATTGCCTTCTATGATGAAATTGAAAAGCGGGACCGTGCGGAG
AGGATACGTGCCGACGAGGAACAGTCGAAGGAGCTGCGCATCTTTGAGAAGAGGGTGAAGAGAAATCCAGAATGGAGAGA
GTATGATCCTTACGCAATGAGTGAGTCTGACAGCAAACAGAGTGATGATGGGTTCAGCGACGCAT---------CTGATG
ACCCGGATGACTACTGA---------------------------------------------------------------
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>chr3B_1_TraesCS3B01G355500
CAAAATTATTTGCACTATGTGTTTGTTGATTCGTGT--TCTGGACAGTGGATAGCACAACAAAGAACAAACTCTAAATCA
ATT-GGGGGTTCGGCAGT-GGCGACCTCAAATCTGACGACCACCGGGAGTGCTGGAGACCTGAGATGTGGTCTGGGCGGC
GGGCGG-CGGCGGCTTGCTCCAAGCGCCGGGCGGCCAGGGCCAAGGCCGCAGCCCGCTGGGGGTCGCGGACGCGCGAAGG
GTGAGGCTGGCTGCGAGGGCCAGGTGGATGGCGGAGAAGCAGGAGGGAAGAAGAGGCTCGTGGGCGTCCGGGCGAGCGGC
GAGGCTGATAGGGTCGCGCGGAAGCGGCGAGGCGGGCGGGGACGGAGGCGGCTGGGCATCGTGGGCGGGAAGGCTCGATG
TGGTGCAGACTTGAAGTGGTGGATGCATGCGTTGTTGCTTGTTGGGTCAAGTGTTATTTGGCTTTTCTTTTTCTCTCCGA
CGCATCTCTAACTGCATAGGTATAAAGGCCGGACCAAAATTCCAGGGTGGGCC---------GCCGCCCTGTAGCTCCGC
CTCTGATTACAACAACAA------------CAACAAAAACTCGTCATGGATTGGAAATTTGGATATCTACTATTCATTAC
TTGGCTAGAAAATGCTCGATGCCGAGCAAAATGTTTTACTCTGTCTATTAAATTGCTAGAGAATGTAGTGCCCTGTTGTG
GTATGCAGAAAAGTTTTGGTAGGAACGCAATACACAGGGGAGGCTGGGAATTGCTCTGCTTCCCTAATTTGGTGATAAGA
TCGTAACCGTTATAAGAACTAACCAAACCTGCATTGCTTTCTGCGAACAACCCAGCTGAACAAGTAAAACCTTCATACTG
ATGCAGCATTGATAACATGGACACTTTTTGCGGCAATTGATATCTGCCCTGGGCCGGGCCTCATTACTTCATGTACTAAT
TGTGGAATATGTACACACATGGCAGGTTTTGAAGCCTTTAGGTAAGAAATCTGAGGTAGGGTTGCTATGGAGTCGTCAGC
TGACGAGCATGCCATGGAGAGTGATACTGAGACTGAAAGTGATCTGATCAGCGAGCTGCCTGAAGACATCCTCCAGAAAA
TCCTGTCTTGCGTGTGGATTAGAACTGTTGTTCGCATGCGCAGGGTGTCTAGGAAGTGGATGGAACTGTGTGAAAGCCTG
CAGTTCATACGCCTTGATTACAGAGATTTCGAACATTGGAAGGTCGAGAAGTTTACTCGTTTTGTTAACAACCTATTGCT
TGTCCGTCGGAAAGTAGACTTGCAAACATTCCAGCTGCATTGGAATCCTCATGGTCCCCTGAACTGCAATGATGTCAGAA
TGTGGATTGGCTATGCGGTGAAGCATAATGTTAAAGTGCTTGACGTGAAACTTTGTCTATATGATAAGACTGTTTTACCT
CCTGCCATTTTCACCTGCCGCTCGCTTCAGGAGCTAAATTTGCAGTGGGGTAATGCTCCCTACCGAGATTATGACCACAC
GGGACTTGTACTGCCTGACATAATCAATCTTCCTTCTCTCAAGAAACTTACTCTGCGCGACGTGGAAGTGGATGAGCTTT
CTCTGAACAGATTCATTGCCTGGAGCCCTGGCCTAGAAGACTTGAATTTGATAGACTCTGCGATGCATCTTGATCTCATA
GCCTCAAAAGCATTAAAAAGGCTAACCCTTGATGGCTTCCTAGATGAGTGCGATGGATTCACAATTGCTGCCCCTCATCT
CATTAGCTTTGAGTGCACGGGATGTTCACTGGAAGCTATTTCCTGGAGAGACCAGCCATCTCTAGAGAGCGCACGCATAG
ATACTTGTGGGTATACATTTGATTGTGAATCAAAGTTCACTGGAGTTCTTAAGTATGCCAAGAAGCTTGCATTATTTGGT
TCTGACATAAAGGTATGGCTTTTGAAAAGACAAGCCTGCGGTTCTATCTGTTGTTTTTTATCTTTA---TTTTTGCTAGA
ACACACATTCTTTTATTATTCTTGTTAAACTATATAAAAAATGAATTATAAAACTTCTTACATTATTCAACCGTTGCTGT
TGTTTGTAGTCGTTAATGTAAAATTTATTACTACCATGTTTCCAGAACAAAATGGAAGTAAACAAAGTAGTTTTACTTAA
TAGTTGAAACACTTCTGCTGCAACAAAAAGGTAAAATCTAAGTGCTGGTGCTCAATGATTTGGGTGTACATTTTGTTATA
TTCTTGCTGCTAAAGTGGATCTGATCATTTTGAATGCAAAACCTAATATCCATGACTTCATCATATTGCTCCATTAACTT
TGAATTAGTACTAATATTTAGAGCATCTCTAGCAGATCCCGTAAAAACACCACCTGT-AAAAACAGTTTACAGGTCCCCT
TATAACGAATTTACGGTACCGCGGGGCATCGGGCGGAACAGATCCCATAAACCCGTACAATAAAAGTTTTTTT-CTTTGT
TTTCTCCTCACGCTTCTTCCCC-----GACGCACGCATGGACGGACTCGAACTCCGGCCGGCTGGAACGGCGCCGCTCCG
GCCTGCCGCCTACTCCGGCGCCGCTCTGGCCTGCTGCCTGCTCCAGCGACTTTCCGTCGATGCTCCGTCCCGCCGCATGC
TCTGGCGATGCTCCGGCCAGCCGCTGCCGAGCTCCTCCGCCTGCTCGCTGCTCGCACGCGGCGTTGCCAGGCCCCCTGCT
CCAGTGTTGACCGGTTTTATGGGATCCTCAAAAAACGGTTTGAATCCTCCAAATATGACAGATGGTTGCTCTAATATACG
GGAACCTGT-AAAAAA---ATATGGGGTATGCTATTTTACAGGATCTATTCGGTGTTTTTTTT-CCAACCTGTACAGTAA
ATCTGAAGGTTTGACCGTTTTTACTGGATCTGCTAG-GATGCTCTTATGTTGGTCTAAATTCTAACAAACAACTATTGGA
GTTGGTTCAATATTTTTCTATACTGATCTGTTCCACAATTTGATTTTCTTACCTTTGTTATGTCCATCAAAATAGAGCAC
ACTTTCAGTAGAAGTAAAAGTGGATCAGATATGATGGAAGCATTCAGAGTGTGAAACCTGGATAAAAGGGCAACCTGGTG
CATGTAGCTCCCGCTTGCGCAGGGTCCAGGGAAGGGTCCGACCACTTTGGGTCTATAGTACGCAGCCTTTCCCTACATTT
CTGTAAGAGGCTGTTTCCAGGACTTGAACCTGGATATGAAATTTAATTCTGTTTGATATGGATACTTTTAAGCTTTAACC
ACTTAGTTACGTGCTGTGCATAAGCAGATGGAAGAGAAAAAAAATGA-GCTTGAGACATTGTGTTTGATAAGCTTACATA
TTTTCTCAACTGTAACAAAATTGGCAGTTTTCGTTTTTTATGAGCTTACACTTAGTTATTTGGGAGGCTTTAACCACTTG
CATGTTTTCTCAACTGTAACAAAATTCACAATTTTCGTAGTGGGAAATTTGGTCTGTTGACTTCTTATAGCTGAATATCA
ATTATCAATTATGATGCAACAGTTTTGTATTGCTACATTTTCATGATGTCTTGTCTTGTATTGCTACATTTTCATGATGC
AACAATTTTGATGTTTGCACTCTTTCGTTCAAGTTAATGATACGGTGTTATCGGTATTGTAGTTGCTTTAGGTTTGTCCT
AGTCATAACTCACTCGCTCACTCAATGCAAGGTTATGTTGGAAAAGGAGCTGCCAACATGTTCAGCGTTTGAAAGCCTCA
CAACTCTTGAGATTGGCGAATGGTTTTTAACTGAGGACTTGTACGTTGTGCTTCGCTTCCTCCAGCTTTCACCGAGGCTA
GAAGAACTCACTTTGATGCATAGGCCGGTATGCTGCATGTAATATCTATTGCATTTATTATATTGAGAAGTTTTGCTAAA
ATATATCCTCTCCTTTTGTTTTCTGTTTATCTCTAGCTTGATGAAGGAGCGGAAATAGATTGCATGCCAATTGACGGGAT
GACCTTCCAGTGTCCACTCCTTGAAAGTGTTGTCATACAATGTTCAGAGGGTGATGGAAGAATCGATAAGCTGCTAAGTG
TTCTGGTAGTCAATGGGATTAGTCTAGACAATATAAATATTGCCTTCTATGATGAAATTGAAAAGCGGGACCGTGCGGAG
AGGATACGTGCCGACGAGGAACAGTCGAAGGAGCTGCGCATCTTTGAGAAGAGGGTGAAGAGAAATCCAGAATGGAGAGA
GTATGATCCTTACGCAATGAGTGAGTCTGACAGCAAACAGAGTGATGATGGGTTCAGCGACGCAT---------CTGATG
ACCCGGATGACTACTGAGGGGGTATGGCTTTCAGAGCAATGAATTTGAGAGCTTGACGCTAGAGCCCTGCAGGGTGGGTT
ACTGCTTTTATACCCATCCAATATTCCGTTCCTTCTGTTCTAGATGAGACCTTCATCTC-TTGGATCCGTCCTCTTACTT
CTGAAACTTGGTGACTTGTGGGTTATGGAGCCGAAAATCTTATGCTCCGAGCGTTTTTACTGTTTGAGCATAGTTGTGTA
ATGTGACATGGATACATATTGACCTGTTGTTTTGAGCATAGTTGTGTAATGTGACATGGATACATATTGACC--------
----------------------------------------TGTTGTTTTTGCAATTACTCTCTAGTTAGCCGTGTGGTCA
CTGATGGTTAGTGTTGTCCCATGCTCTAGAGTTAGCGTGTGCACTGTACGACCTTTCATATGATGGGAGGCCTTTTCGGT
TAATCGACTCTAGAGCGGAGTTATTTGCTTCCTAAGCTTTGTTCTTGGATCATCGGGGCTAGAGTGATCAAAGCACAAAA
TGAGCTCCTGAGAATAACAATTGATTTTTTTT-TCTTGCTCAACTAATTGACTCAGGCATCCTTCATATTTTGGAAGCAT
ACAGAGATGGTTGTTCAAAAGAATTGAATTTCACTCTCACAGGAGGTGTTTAATAAATGAGAGATAGTTTGTGGAGGATA
AGTAGATTTTTTAACTTTGCCTTCTGTTCGAGGG-ATTACTCGGTCCTACGAAAGAAGCTCGCTAAACTCAAGCTCATCC
TATTCATCGACATTCTTTGTGCGTTTTGTTCGGGATGTAGGTTCGGATGGTCGAGACTCGAGAGCACGTGTATTCATCAG
ATCCAGATCCTTTGGCGTACGAAGCAAAGTCAGGTGGAGCTACATTTCCCT------------GACTTGCCTTCGAAAGT
GAACTGGCACAACATTGTATCTACAGTGATTATCTACTGTAATCATCTATAATCTTTTGTCTATAGTGCCTACTGCACCT
CTCTGACTTGCCTCTACTATTTTACAGAAAAAACAATTGA
>chr3D_1
CAAAATTATTTGTACCATGTGTTTGTTGATTCGTGT--TCTGGACAGTGGATAGCACGACAAAGAACAAACCCTAAATCA
ATTGGGGGGTTTGGCAGTGGGCGACCTCAAATCTGACGACCACCGGGAGTGCTGGAGACCTGAGATGTGGTCTGGGCGGT
GGGCGGGCGGCGGCTTGCTCCGAACGCGGGGCGGCCAGGGGCAAGGCCGCAGCCCGCAGGTGGTCACGGACGCGCGGAGG
GTGAGGCTGGCTGCGAGGGCCGGGTGGATGGTGGAGAAGCAGGAGGGAAGAAGAGGCTCGTGGGCGTCCGGGCGAGCGGC
GAGGCTGACAGGGTCGCGCGGAAGCGGCGAGGTGGGCGGGGACGGAGGCGGCTGGGCATCGTGGGCGGGAAGGCTCGATG
TGGTGCAGACGTGAAGTGGTGGATGCATGCGTTGTTGCTTGTTGGGTCAAGTGTTATTGGGCTTTTCTTTTTCTCTCCGA
CACATCTCTAACTGCATAGGTATAAAGGCCGGACCAAAATTCCAGGGTGGGCCGCCACCCTGGCCACCCTGTAGCTCCGC
CTCTGATTACAACAACAAGAACAACAACAACAACAAAAACTCGTCATGGATTGGAAATTTGGATATCTACTGTTCATTAC
TTGGCTAGGAAATGCTCGATGCCGAGCAAAATGTTTTACTCTGTCTATTAAATTGCTAGAGAATGCAGTGCCCTGTTGTG
GTGTGCAGAAAAGTTTTGGTAGGAACGGAATACACAGGGGAGGCTGGAAATTGCTCTGCTTCCCTAATTTGGTGATAAGA
TCGTAACCGTTATAAGAACTAACCAAACCTGCATTGGTTTGTGCGAACAACCCAGCTAAACAAGTAAAACCTTCATACTG
ATGCAGCATTGATAACCTGGACACTTTTTGCGGCAATTGATATCTGCCCTGGGCCGGGCCTCATTACTTCATGTACTAAT
TGTGGAATATGTACACACATGGCAGGTTTTGAAGCCTTTAGGTAAGAAATTTGAGGTAGGGTTGCTATGGAGTCGTCAGA
TGACGAGCATGCCATGGAGAGTGATACTGAGACTGAAAGTGATCTGATCAGCGGGCTGCCTGAAGACATCCTCCAGAAAA
TCCTGTCGTGCGTGTGGATTAGAACTGTTGTGCGCATGCGCAGGGTGTCTAGGAAGTGGATGGAACTGTGTGAAAGCCTG
CAGTTCATACGCCTTGATTACAGAGATTTCGAACATTGGAAGGTCGAGAAGTTTACTCGTTTCGTTAACAACCTATTGCT
TGTCCGTCGGAAACTAGACTTGCACACATTCCAGCTGCATTGGAATCCTCATGGTCCCCTGAACTGCAATGATGTCAGAA
TGTGGATTGGCTATGCGGTGAAGCATAATGTTAAAGTGCTTGACGTGAAACTTTGTCTATATGATAAGACTGTTTTACCT
CCTGCCATTTTCACCTGCCGCTCGCTTCAGGAGCTAAATTTGCAGTGGGGTAATGCTCCCTACCGAGATTATGATCACAC
AGGACTTGTACTGCCTGACATAATCAATCTTCCTTCTCTCAAGAAACTTACTCTGCGCGACGTGGAAGTGGATGAGCTTT
CTCTGAACAGATTCATTGCCCGGAGCCCTGGCCTAGAAGACTTGAATTTGATAGACTCTGCGATGCGTCTTGATCTCATA
GCCTCAAAAGCATTAAAAAGGCTAACCCTTGATGGCTTCCTAGGTGAGTGTGATGGATTCACAATTGCTGCCCCTCATCT
CATTGGCTTTGAGTGCACGGGATGTTCACTGGAAGCTATTTCCTGGAGAGACCAGCCATCTCTAGAGAGCGCACGCATAG
ATACTTGTGGGTATTCATTTGATTGTGAATCAAAGTTCACTGGAGTTCTTAAGTATGCCAAGAAGCTTGCATTATTTGGT
TCTGACATAAAGGTATGGCTTTTGAAAAGACAAGCCTGCGGTTCTATCTGTTGTTTTTTATCTTTAATATTTTTGCTAGA
ACACACATTCTTTTATTATTCTTGTTAAACTGTATAAAAAATGAATTATAAAACTTCTTACATTATTCAACGGTTGCTGT
TGTTTGTAGTCGTTAATGTAAAATTTATTACTACCATGTTTCCAGAACAAAATGGAAGTAAAGAAAGTAGTTTTACTTAA
TAGTTGAAACACTTCTGCTGCAACAAAAAGGTAAAATCTAAGTGCCGTTGCTCAATGATTTGGGTGTACGTTTTGTT-TA
TTCTTGCTGCTAAAGTGGATTTGATCATTTTGAATGCAAAACCTAATATCCATGAGTTCATCATATTGCTCCATTAACTT
TGAATTAGTACTAATATTTAGAGCATCTCTAGCAGATCCCGTAAAAACACCACCTGT-AAAAACAGTTTACAGGTCCCCT
TATAACGAATTTACGGTACCGCAAGGCATCGGGTGGAACAGATCCCATAAACCCGTACCATAAAAGTTTTTTTCCTTTGT
TTTCTCCTCACGCTTCTTCTTACCCGTGACACACGCATGGACGAACTCGAACTCCGGCCGGCCAGAACGGCGCTGCTCCG
GCCTGCCGCCTGCTCCGGCGCCGCTCCGGCCCGCTGCCTGCTCCAGCGACTTTCCGGCGACGCTTCGTCCCGCCGCATGC
TCTGGCGATGCTCCGGCCAGCCGCTGCCGAGC-CCTCCCCCTGCTCGCTGCTCGCGCGCGGTGTCGCCAGCCCCCCTGCT
CCA-GGTTGACCGGTTTTACGGGATCCTCAAAAAACGGCTTGAATCCTCCATACATGACGGATGGTTGCTCTAATATACG
AGAACCTGT-AAAAAA---ATACGGGGTATGCTATTTTACAGGATCTATTCGGTGTTTTTTTT-TCAACCTGTACCGTAA
ATCTGAAGGTTTGACCGTTTTTACAGGATCTGCTAGAGATGCTCTTATGTTGGTCTAAATTCTAACAAACAACTATTGGA
GTTGGTTCAATATTTTTCTATACTGATCTCTTCCACAATTTGATTTTCTTACCTTAGTTATGTCCACCAAAATAGAGCAC
ACTTTCAGTAGAAGTAAAAGTGGATCAGATATGATGGAAGCATTCAGAGTGTGAAACCTGGATA----------------
--------------------------------------------------------------------------------
------------------------------------TGAAATGTAATTCTGTTTGATATGGATACTTTTAAGCTTTAACC
ACTTAGTTA-GTGCTGTGCGTAAGCAGATAGAAGAGAAAAAAAAATGCGCTTGAGACATTGTGTTTGATAAGCTTAC---
------------TAACAAAATTGGCAGTTTTTGTTTTTGATGAGCTTACACTTAGTCATTTGGAAGGCTTTAACCACTTG
CATGTTTTCTCAACTGTAACAAAATTCACAA-TTTCGTAGTGGGAAGTTTGGTCTGTTGGCTT---ATAGCGGAATATCA
ATTATCAATTATGATGCAACAGTTTTGTATTGCTACACTTTCATGATGTCTTGTCTTGCAATGCTAA-------------
------TTTGATGTTTGCACTCTTTCGTTCAAGTTAATGATACGGTGTTATCGGTATTGTAGTTGCTTTAGGTTTGTCCT
AGTCATAACTCACTCGCTCACTCAATGCAAGGTTATGTTGGAAAAGGAGCTGCCAACATGTTCTGCGTTTGAAAGCCTCA
CAACTCTTGAGATTGGCGAATGGTTTTTAACTGAGGACTTGTACGTTGTGCTTCGCTTCCTCCAGCTTTCACCGAGGCTA
GAAGAACTCACTTTGATGCATAGGCCGGTATGCTGCATGTAATATCTATTGCATTTATTATATTGAGAAGTTTTGCTAAA
ATATATCCTCTCCTTTTGCTTTCTCTTTATCTCTAGCTTGATGAAGGAGCGGAAATAGATTGCATGCCAATTGACGGGAT
GACCTTCCGGTGTCCACTCCTTGAAAGTGTTGTCATACAATGTTCAGAGGGTGATGGAGGAATCGATAAGCTGCTAAGTG
TTCTGGTAGTCAATGGGATTAGTCTAGACAATATAAATATTGCCTTCTATGATGAAATTGAAAAGCGGGACCGTGCGGAG
AGGATACGTGCCGACGAGGAACGGTCGAAGGAGCTGCGCATCTTCGAGAAGAGGGTGAAGAGAAATCCAGAATGGAGAGA
GTATGATCCTTACGCAATGAGTGAGTCTGACAGCAAACAGAGTGATGATGGGTTCAGCGACGCAT---------CTGATG
AC---------TACTGAGGGGGTATGGCTTTCAGAGCAATGAATTTGAGAGTTTGACGCTAGAGCCCTGCAGGGTGGGTT
ACTGCTTTTATACCCATCCAATATTCAGTTCCTTTTGTTCTAGATGAGACCTTCATCTCTTTGGATCCTTCCTCTTACTT
CTGAAACTTGGTGACTTGTGGGTTATGGAGCCGAAAATCTTATGCTCCGAGCGTTTGTACTGTTTGAGCATGGTTGTGTA
ATGTGACATGGATACATATTGACCTGTTGTTTTGAGCATAGTTGTGTAATGTGACATGGATACATATTGACCTGTTGTTT
TGAGCATAGTTGTGTACTGTGACATGGATACATATTGACCAGTTGTTTTTGCAATTACTCTCTAGTTAGCTGTGTGGTCA
CTGATGGTTAGTGTTGTCCCATGCTCTAGAGTTAGCGTGTGCACTGTACGACCTTTCATACGATGGGAGGCCTTTTCAGT
TAATCGACTCTAGAGCGGAGTTATTTGCGTCCTAAGCTTTGTTCTTGGATCATCGGGGCTAGAATGATCAAAGCACAAAA
TGAGCACCTGAGAATAACAATTGATTTTTTTT-TCTTGCTCAACTAATTGACTCAGGCATCCTTCATATTTTGGAATCCT
ACAGAGATGGTTGTTCAAAAGAATTGAATTTCATTCTCATTGGAGGTGTTTAACAAATGAGTGATAGTTTGTGGAGGATA
AGTACATTTTATAACTTTACCTTCTGTTTGAAGA-ATAACTCGGTCCTAAGAAAGCAGCTCGCTAAACTCAAGCCCGTCC
TGTTCGTCGACATTCTTTGTGCGTTTTATTCGGGAGATAGGTTCGGATGGTTGAGACTCGAGAGCACGTGTATTCATCAG
ATCCAGATCCTCTGACGTACGAAGCAAAGTCAGGTGGAGCTACACTTCCTATAATCAGATCCAGACTTGCCTTCGAAAGT
GAACTGGCACAACATTGTATCTACAGTGATTATCTACTGTAATCATCTATAATCTTTTGTCTATGGTGCCTGCTGCACCT
CTCTGACTTGCCTATACTATTTTACAGAAGAAACA-----
>chr3A_1
CAAAATTATTTGTACTATGTGTTTGTCTATTCGTGTGTTCTGGACAGTGGATAGCACGACAAAGAACAAACCCTAAATCA
ATTGGGGGGTTTGGCAGTGGGCGACCTCAAATCTGACGACCACCGGGAGTGCTGGAGACCTGAGATGTGGTCTGGGCGGC
GGGCGG-CGGCGGCTTGCTCCAAGCGCCGTGCGGCCAGGGCCAAGGCCACAGCCCGCAGGGGGTCGTGGATGCGCGGAGG
GTGAGGCTGGCTGTGAGGGCCGGGTGGATGGCGGAGAAGAAGGGGGGAAGAAGAGGCTCGTGGGCGTCCGGGTGAGCGGC
GAGGCTGACAGGGTCGCGCAGAAGCGGCGAGGCGGGCGGGGACGGAGGCGGCTGGGCATCGTGGGCGGGAAGGCTCGATG
TGGTGCAGACGTGAAGTGGTGGATGCATGCATTGTTGCTTGTTGGGTCAAGTGTTATTGGGCTTTTCTTTTTCTCTCCGA
CACGTCTCGAACTGCATAGGTATAAAGGCCGGACCAAAATTCCAGGGTGGGCCGCCACCCTGGCCACCCTGTAGCTCCGC
CTCTGATTACAACAACAACAACAACAAC---AACAAAAACTCTTCATGGATTGGAAATTTGGATATCTACTGTTCATTAC
TTGGCTAGAAAATGCTCGATGCCGAGCAAAATGTTTTACTCTGTCTATTAAATTGCTAGAGAATGTAGTGCTCTGTTGTG
GTATGCAGAAAAGTTTTGGTAGGAACGCAATACACAGGGGAGGCTGGAAATTGCTCTGCTTCCCTAATTTGGTGTTAAGA
TCGTAACCGTTATAAGAACTAACCAAACCTGCATTGCTTTGTGCGAACAACCCAGCTAAACAAGTAAAACATTCATACTG
ATGCAACATTGATAACATGGACACTTTTTGCGGCAATTGATATCTGCCCTGGGCCGGGCCTCATTACTTCATGTACTAAT
TGTGGAATATGTACACACATGGCAGGTTTTGAAGCCTTTAGGTAAGAAATCTGAGGTAGGGTTGCTATGGAGTCGTCAGA
TGACGAGCATGCCATGGAGAGTGATACTGTGACTAAAAGTGATCTGATCAGCGAGCTGCCTGAAGACATCCTCCAGAAAA
TCCTGTCATGCGTGTGGATTAGAACTGTTGTGCGCATGCGCAGGGTGTCTAGGAAGTGGATGGAACTGTGTGAAAGCCTG
CAGTTCATACGCCTTGATTACAGAGATTTCGAACATTGGAAGGTCGAGAAGTTTACTCATTTCGTTAACAACCTATTGCT
TGTCCGTCGGAAAGTAGACTTGCACACATTCCAGCTGCATTGGAATCCTCATGGTCCCCTGAACTGCAATGATGTCAGAA
TGTGGATTGGCTATGCGGTGAAGCATAATGTTAAAGTGCTTGACGTGAAACTTTGTCTATATGATAAGACTGTTTTACCT
CCTGCCATTTTCACCTGCCGCTCGCTTCAGGAGCTAAATTTGCAGTGGGGTAATGCTCCCTACCGAGATTATGACCACAC
GGGACTTGTACTGCCTGACATAATCAATCTTCCTTCTCTCAAGAAACTTACTCTGCGCGACGTGGAAGTGGATGAGCTTT
CTCTGAACAGATTCATTGCCCGGAGCCCTGGCCTAGAAGACTTGAATTTGATAGACTCTGCGATGCGTCTTGATCTCATA
GCCTCAAAAGCATTAAAAAGGCTAACCCTTGATGGCTTCCTAGGTGAGTGCGATGGATTCACAATTGCTGCCCCTCATCT
CATTAGCTTTGAGTGCACGGGATGTTCACTGGAAGCTATTTCCTGGAGAGACCAACCATCTCTAGAGAGCGCACGCATAG
ATACTTGTGGGTATACATTTGATTGTGAATCAAAGTTCACTGGAGTTCTTAAGTATGCCAAGAAGCTTGCATTATTTGGT
TCTGACATAAAGGTATGGCTTTTGAAAAGACAAGCCTGCGGTTCTATCTGTTGTTTTTTATCTTTAATATTTTTGCTAGA
ACATGCATTCTTTTATTATTCTTGTTAAACTATATAAAAA-TGAATTATAAAACTTATTACATTATTCAACCGTTGCTGT
TGTTTGTAGTCGTTAATGTCAAATTTATCACTACCATGTTTCCAGAACAAAATGGAAGTAAACAAAGTAGTTTTACTTAA
TAGTTGAAACACTTCTGCTGCAACAAAAAGGTAAAATCTAAGTGCCGTTGCTCAATGATTTGGGTGTACATTTTGTT-TA
TTCTTGCTGCTAAAGTGGATCTGATCATTTTGAATGCAAAACCTAATATCCATGAGTTCATCATATTGCTCCGTTAACTT
TGAATTAGTACTAATATTTAGAGCATCTCTAGCAGATCCCGTAAAAACACCACCTGT-AAAAACAGTTTACAGGTCCCCT
TATAACGAATTTACGGTACCGCGAGGCATCGGGCGGAACAGATCCCATAAACCCGTACCATAAAAGTTTTTTTTCTTTGT
TTTCTCCTCACGCTTCTTCTTCCCCGGGACACACACATGGACGAACTCGAACTCTGGCCGGCTAGAACGGCGCCGCTCCG
GCCTGCCGCCTGCTCCGGC-----------CCGCTGCCTGCTCCAGCAACTTTCCGGCGACGCTCCGTCCCGCCGCATGC
TCTGGCGATGCTCCAGCCAGCTGCTGCCAAGCTGCTCTGCCTGCTCGCTGCTTGCACGCGGCGTCGCCAGGCCCCCTGCT
CGAGCGTTGACCGGTTTTATGGGATCCTCAAAAAACGGCTCGAATCCTCCATATATGACGGATGGTTGCTCTAATATACG
GGAACCTGT-AAAAAA---ATATGGGGTATGCTATTTTACAGGATCTATTTGGTGTTTTTTTTTTCAACCTGTACAGTAA
ATCTGAACGTTTGACCGTTTCTACGGGATCTACTAGAGATGCTCTTATGTTGGTCTAAATTCTAACAAACAACTATTGGA
GTTGGTTCAATATTTTTCTATACTGATCTCTTCCACAATTTGATTTTCTTACCTTAGTTATGTCCACCAAAATAGAGCAC
ACTTTCAGTAGAAGTAAAAGTGGATCAGATATGATGGAAGCATTCGGAGTGTGAAACCTGGATA----------------
--------------------------------------------------------------------------------
------------------------------------TGAAATGTAATTCTGTTTGATATGGATACTGTTAAGCTTTAACC
ACTTAGTTA-GTGCTGTGCGTAAGCAGATAGAAGAGAA-AAAAAATGCGCTTGAGACATTGTGTTTGATAAGCTTAC---
------------TAACAAAATTGGCAGTTTTTGTTTTTGATGAGCTTACACTTAGTTACTTGGAAGGCTTTAACCACTTG
CATGTTTTCTCAACTGTAACAAAATTCATAATTTTCGTAGTGGGAAATTTGGTCTGTTGGCTTCTTATAGCTGAATATCA
ATTATCAATTATGATGCAACAGTTTTATATTGCTACATTTTCATGATGTCTTGTGTTGCAATGCTAA-------------
------TTTGATGTTTGCACTCTTCCGTTCAAGTTAATGATACGGTGTTATCGGTATTATAATTGCTTTAGGTTTGTCCT
AGTCATAACTCACTCGCTCACTCAATGCAAGGTTATGTTGGAAAAGGAGCTGCCAACATGTTCAGCGTTTGAAAACCTCA
CAACTCTTGAGATTGGCGAATGGTATTTAACTGAGGACTTGTTCGTTGTGCTTCGCTTCCTCCAGCTTTCACCGAGGCTA
GAAGAACTCACTTTGATGAATAGGCCGGTATGCTGCATGTAATATCTATTGCATTTACTATATTGAGAAGTTTTGCTAAA
ATATATCCTCTCCTTTTGCTTTCTGTTTATCTCTAGCTTGATGAAGGAGCGGAAATAGATTGCATGCCAATTGACGGGAT
GACCTTCCGGTGTCCACTCCTTGAAAGTGTTGTCATACAATGTTCAGAGGGTGATGGAAGAATTGATAAGCTGCTAAGTG
TTCTGGTAGTCAATGGGATTAGTCCAGACAATATAAATATTGCCTTCTATGATGAAATTGAAAAGCGGGACCGTGCGGAG
AGGATACGTGCCGACGAGGAACGGTCGAAGGAGCTGCGCATCTTCGAGAAGAGGGTGAGGAGAAATCCAGAATGGAGAGA
GTATGATCCTTACGCAATGAGTGAGTCTGACAGCAAGCAGAGTGATGATGGGTTCAGCGATGCATCTGATGACCCTGATG
AC---------TACTGAGGGGGTATGGCTTTCAGAGCAATGAATTTGAGAGTTTGACGCTAGAGCCCTGCAGGGTGGGCT
ACTGCTTTTATACCCATCCAATATTCTGTTCCTTCTGTTCTAGATGAGACCTTCATCTC-TTGGATCCTTCCTCTTGCTT
CTGAAACTTGGTGACTTGTGGGTTATGGAGCCGAACATCTTATGCTCCGAGCGTTTGTACCGTTTGAGCATAGTTATGTA
ATGCGACATGTATACATATTGACCTGTTGTTTTGAACATAGCTGTGCAATGTGACATGGAT-------------------
-----------------------------ACATATCGACCTGTTGTTTCTGCAATTACTCTCTAGTTAGCCGTGTGGTCA
CTGATGGTTAGTGTTGTCCCATGCTCTAGAGTTCGTGTGTGCACTGTACGACCTTTCATATGATGGGAGGCCTTTTCGGT
TAATCGACTCTAGAGCGGAGTTGTTTTCTTCCTAAGCTTTGTTCTTGGATCATCGGGGCTAGCATGATCAAAGCACAAAA
TGAGCACCTGAGAATAACAATTGGTTTTTTTTCTCTTGCTCAACTAATTGACTCAGGCATCCTTCATATTTTGGAATCCT
ACAGAGATGGTTGTTCAAAAGAATTGAATTTCATTCTCATTGGAGGTGTTTAACAAATGAGAGATAGTTTGTGGAGGATA
AGTAGATTTTTTAACTTAACCGTCTGTTCGAAGGGATAACTCGGTCCTAAGAAAGCAGCTCGCTAAACTCAAGCT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr3D_2308
TTA-----------------------------------------------------------------------------
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-------------------AGAGCATCTCTAGCAGATCCCGTAAAGCATCACTTGTAAAAAAACAGTATACAGGCTCACC
TAAAACGAATTTACGGTATTGCGAGGCATCGGGCGGAATAGATCCCGTAAACCCGTACCGTAAAC--TTTTTTTTTCTCT
TTTCTCCTCATACTTCTTCTTCCCCGGGACGCACGCATGGACGGACTCGAACTCCGACTGGCTAGAACGGTGTCGCTCCG
GCCTGCCGCCTGATGTGGC-----------CCGCTGCCTGCTCC------------GCGACGCTCCAGCTCGGCGTGTGC
TCCGGCGATGCTCCGGCCGGCCACCGACGAGT-CCTCCGCCTCCTTGCTGCTCATGCGCGACGTTGCGAGGCCCCCTGCT
CCGGCGTTGACTGGTTT-ACAGGATCCTCCAAAAA-GGCTGAAATCCACTAGGTATAAAGGATTGGGGCTCGAATATAGG
CGAGCCTGT-AATTTTTTTTTACGGGATATGCTGTTTTACGGGATCTATTCGGGGCGTTTTTT-CCACCTTGTATCATAA
ATACCAGGGTTTGACCATTTTTACAGGATCTGCTAGAGATGCTCT-----------------------------------
--------------------------------------------------------------------------------
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>chrUn_2312
GAGCCAG-------------------------------------------------------------------------
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-------------------------TCTCTAGCAGATCCCGTCAAAACACCACCTGT-TAAAACAGTATACAGGTCCCCC
TAAAACGAATTTACGGTACCGCGAGGCATCGGACGAAACATATCCCGTAAAGG--------------TTTTTTTCTTCCT
TCTCTCCTCACGCTTCTTCTTCCCTGGTACGCACGCATGGACAAACTCGAACTCCGATCGGCCAAAACAGCGCTGCTCCG
GCCTGCCGCCTTCTCCGGCGCCGCTCTAGCCCGTTGCCTACTCCGGCCCACCACG-------------------------
--------TGCTCCGGCCGGCCGCTGCCGAGCTCCTCCGCCTGCCCGCTGCTCGCGTGCGGCGTCACCAGGCCCCCTGCT
TCGGGGTTGACCGGTTTTATGGGATCCTCAAAAAACGGCTCGAATCCTCCATATATGACGAATGGGTGCTCTAATACATG
GGAACCTGTGAAAAAA---TTACGGGATATGCTATTTTACAGGATCTATTTGGTGCCTTTTTT-CCAACCTGTACAGTAA
ATGTGAAGGTTTGGCCGCTTTTATGGGATCTGCTAGAGATACTCTTA---------------------------------
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----------------------------------------
>SNPs
------------S--------------------------------------------S-------------S--------
-----------S--------------------------------------------------------------------
---------------------------------------------------------S------------------S---
---------------------S----------------------------------------------------------
--------S-----------------------------------------------------------------------
----------S-----------------------------------------------S---------------------
-S---------------------------------------------------------------S--------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
----------------------------------------S----------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-------S-----------------------S------------------------------------------------
--------------------------------------------------------------S-----------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------------------------------------S-------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-S-----------------------------S--
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-----------------------S----------------------------------S---------------------
-------------------SS------------------------------------------S----------------
-----------S-------------------S------------------------S---S-------------------
--------------------------------------------------------------------------------
----S---------------------------------S------------S-------S--------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------------------------S-------------------------S----------S-------------
----------------------------------------------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-------------------------------------
---------S---------S---------S--------------SSS------------------------------SSS
SSSSSSSSSSSS-------------------S------S------------------------S----------------
-----------------------------------------------------------S--------------------
----------------------------------------------------------S-S-----SSSSSSSSSSSSSS
SSSSSS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------S-----------------------------------
--------------------------------------------------------------------------------
--SSSSSSSSS----------------------------------------S----------------------------
--------------------------S-----------------------------------------S-----------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----S----------------------------------------------------------------------S-S-
---------------------------------S-----SS------------S--------------------------
------------------S------------S-----S-----------S-----S--------------------S---
-S---S---------------------S-------SS--------------S----------------------------
-----------S--S-----------------------------S----SS-----------------------------
----------------------------------------------------------------S------S--------
-------------S---------------S-----SSSSS
>forward_411
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GCTCGATG
TGGTGCAGACT---------------------------------------------------------------------
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>reverse_1621
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--------------------TGGAGCCCTGGCCTAGAAG-----------------------------------------
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>forward_858
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--------------------------------------TTCTGCGAACAACCCAGCTG----------------------
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>reverse_2206
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---------------------------------------------TGGTGCTCAATGATTTGGGTG--------------
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----------------------------------------
>forward_1040
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------GTTGCTATGGAGTCGTCAGC
--------------------------------------------------------------------------------
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>reverse_2905
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------------------------TGGATCTGCTAGGATGCTCT------------------------------------
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>forward_2501
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-TTCTCCTCACGCTTCTTCCC-----------------------------------------------------------
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>reverse_4324
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---CGGATGACTACTGAGGGGGT---------------------------------------------------------
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----------------------------------------
>forward_3197
--------------------------------------------------------------------------------
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---------------------------------------------------------GTACGCAGCCTTTCCCTACA---
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>reverse_5215
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--------------GCGTACGAAGCAAAGTCAGG----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
