>input_sequence_78679
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-------------------------------------------GTATATAAGCACCTCCCCGGCTTCTCCGTCGAAGCAG
CGACACCGGCGTCAATCAGCAGCAACAAGGCGCCTTCCTCGCCCTCCTCAAGCAAGCGAGAAGCCAAGTCACGAAGATGG
CAGGGCAGTTGAAGGCCAAGATCCTCGCCGCGGCCGCCGTCGCCGTGGTCGTCGCCTCGTCCCTGGTCGGCATGGCCTCC
GCGGCCGACGCGCCCGCCGTGTCGCCCACCTCCGGCGCCACCGCCGCGCCGCCCACCTCCGGCGCCGCCGGCGCCGCCCC
GGCCTTCGCCGCCGTGTCCGTCGCCGCCACGGCGTTCGGCTACCTCTTCTGCTAGGCGTGCGCCCATATGGCGCCCGGTT
TGGTGCCGCG--GCGCGCGCGTGCATGCTCTTCTTTTCTGGCATTTGTTGTTGTGGGTTCATGGGCGTTCCGGTGCAACT
TCGTTTCTTGG--------TTCGAGGTCTGTAGTTGATGGTGTGTGTACAGTGACGATA---------------------
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>chr3A_1_TraesCS3A01G318600
GATGCTAGTTGGTTTGTTTGGTGGAAGATCATATGTTCAGATCCTTAATGATATTTAATACCTCTCTTATCTTGAACATG
AATATGCTTTGTGAGTAGTTATGTTTGTTCCCGAGGACATGGGAGAAGTCTTGTTATAAGTAATCATGTGAATTTGATAT
TTGTTTGATATTTTGATGAGATGTATGTTGTCTTTTCTCTAGTGGTGTTATGTGAACAACGACTACATGACACCTCACTT
CTCACTTTTTCATAAAGTTGGAGCTGGTTTAGGGTGTCTTTGGTTCAACATCTCGACCCAACTTCTGCAATACAAAAGAC
AGTTAAAGGAAAATTTCAACCACATGATCTGGAACTGTGCAACTTCCACGTAGTGCAAGTCTCGGAGTCACCAGACCGAA
C-------------------------------------------------------------------------------
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------------------------------------------------------------------------------TT
TCACGGACATTGCAACTAAACAACTTT-GAGCTTTCCCACAGTTCTCAGCTCACAACAACTTTCTCATACCTCA------
---------------------------CATCAGGTTTTTCCGAATCCATAGATCAACCAAACGGAGAATGCTGACTCATG
TGCTTTGTTCGCTATTTTAAGTTTTAAACCCTTGTATTTTAAAAAAGTTACT----------------------------
--------------------------------------------------------ACT---CATCAATCGACAGTTCAC
AGTTGGACTGTACG-----ACCATGAAATCTTCTAGAGCTAGTAATAAAAACATCCGT----------------------
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------------------------AAAGATGGCTGCAAAAAAAAATAGTATCCGTATGGAGCAGCTCGCGGTCGCCATAG
CAATAGCCAAACCTCAGAACACACC---------TCCCACCATTTGCACAGCCGCGCGCGGCGGAGGCCAGCAGAGCAGG
ACGGCAGAGTCGTT------------------------------------------------------------------
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------------------------------------------------------------------------------GG
CACCCACCATGTGCCATTGCCGGCTGCCGCGCGAATAATTCGCCGGCCCAGCGCAGCGACGGGCCCCGCACCAACTCCT-
CCACCCCACGTACCGGCGCCGGAAATCACTCGCGCACGCGCCATGAACCCAAGCCAGCCACGCGACAGCCGGCCGTCCTC
CCGTTCGCCAGCTTATATTAGGCAGGCCGGCCCAACCGCAGCTGTATATAAGCACCTCCCCGGCTTCTCCGTCGAAGCAG
CGACACCGGCGTCAATCAGCAGCAACAAGGCGCCTTCCTCGCCCTCCTCAAGCAAGCGAGAAGCCAAGTCACGAAGATGG
CAGGGCAGTTGAAGGCCAAGATCCTCGCCGCGGCCGCCGTCGCCGTGGTCGTCGCCTCGTCCCTGGTCGGCATGGCCTCC
GCGGCCGACGCGCCCGCCGTGTCGCCCACCTCCGGCGCCACCGCCGCGCCGCCCACCTCCGGCGCCGCCGGCGCCGCCCC
GGCCTTCGCCGCCGTGTCCGTCGCCGCCACGGCGTTCGGCTACCTCTTCTGCTAGGCGTGCGCCCATATGGCGCCCGGTT
TGGTGCCGCG--GCGCGCGCGTGCATGCTCTTCTTTTCTGGCATTTGTTGTTGTGGGTTCATGGGCGTTCCGGTGCAACT
TCGTTTCTTGG--------TTCGAGGTCTGTAGTTGATGGTGTGTGTACAGTGACGATATTAAATTGAATTCATACGTTT
CATCTTCATTCGTTTGCATTTGCATTCGTGTTTTTTCTTTCTGTGC----------------------------------
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---------------------------ATACGCGATCCCAACTCTCACGAACTGTGTTGACTGTGGAAGTGTGGATACAC
CTC-TGTTACGAACCATGTGGTGGCCAGAACAGCTAGAGATACAAACAGCAGCT-ATTTATTAGTTGCTGATGTCCTGTG
CTGTTTTCTTCATGGAAAAAAAAATGCCATGGGATCATGTTCGCTCCCCTTAGCCGAATCCATCAGAATTTTGATCGACA
AAATGAACCAGGCAGA----GACCATGAGTGCCTTTTGGGCCC-------TTCAGACGGCACAACTTCTAAAAATCA---
AATATCCTACTGTATTACACAAATAT------------------------------------------------------
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----------AATCATTACGGT----------------------------------------------------------
-----------------------------------------------------------------------TATGCTAAA
TTTGATA-TTT-TTAAGGGAATGCTAAATTCGATTTTTTTGGACGGGCTTTCCTTCCAAGTCAATATT------TAAAAC
TAAAACTCTAAGTGTGCAATTAGGTGAAAATGTCAGATATGAAAACATAAGATCTATAAGCAGCGACAGATATAA-----
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---------------------------------------------------------------GACGTGA---TTTTTTG
AAATTTCTTGAAAATAATGTTTAAAAAAAA--TTCAAAACATTTATTGAAAATGTGAATACAATTTAAA-TTCAAACTAT
TTT---TGAACATGTGACATTTTGTTTCCAATTTTTTGTTTTTATAGTTCCCAAAATTATTTGGAAATGTGAACAAACTT
TGGAAAG----AAACATTTTTTTGAATAATTCAACATTTTGTGTAAATTGCATATCTTTTGAAAATCCGAACATTTATTG
GAACTGTGATTTTTGA--AAATTATGCA----------AAATTGAAAAAG-ATTTAAAAAAATATG--TTTTATAAATTT
GCGAACAATTTGAAAGTCTCATTTTTTTCACAC---AAAAATGTGAAC--------------------AC-AATTTTTAA
AAACAGAACAATTTTTTAAAACATGAACAATTTTTGCATGTCCCCAAGCATTGTACGAGAATCTGATTGTTTTTTGAAAT
AAGAAGATTTTTTGAAA
>chr3B_233
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------------------------------------------------------------------------CCTCACTT
CTCACTTTTTCACAAAGTTGGAGCTGGTTTAGGGTGTCTTTGGTTCAACATCTCGACCTAACTTTTGCAATACAAAAGGC
AGTTAAAGTAAAATTTCAACCACATGATCTGGAACTGTGCAACTTCCAGGTAGTGCAAGTCTCGGAGTCACCAGACCGCA
GCTTCCATCATAATGAGGACTGGTATTTGATGAACACTACCCCACACTCCCTTCCGTGTCACCGATGGGTCTTATCAGTT
CATTTTTCCTCATCCTTAACGCTGCATCCATCTACTGAACAACCCACCCACACACAAACATCGCGTGAGTGAACAAGTCC
GCCTTACAAGTAGGGGTTACGTGTGTCGTTGCCACTTTGGCTAGCCCTCCGCTGCCACGCCGCACCTTCGATCCACTCTC
AGTTTCGTCCCGCCCCTCCAGCCTTCGGCTCTCCTCGATCCGCCCTCTAGGAAACCTCCCCTAGCTCCACCCTGCGCACC
GTTCCTCTCCTCTCTTCTCCCATATCCCTCCCTCCTTCCTTCTTTCCAAAATGATCATTGAAATATCCACCAATGTACAA
ATTGCTACTTTACGGTCAATCAACATATAAACGGCCAGCCTTCAGGGACATTATATACCGTTTCTACCAAATTTACAGTT
TCACAGACATTGCAACCAAACAACTTTTGAGCTTTCCCATATTTCTCAACTCACAACAACTTTCTCATACACTTGTGCTG
GGCTACTGACCAAATTTACAGTTTCACCATCAGGTTTTTCCGAATCCATAGATCAACCAAACGGAGAATGCTGACTCATG
TGCTTTGTTCGCTATTTTAAGTTTTAAACCCTTGTATTTTTAAAAAGTTACT----------------------------
--------------------------------------------------------ACTACTCATCAATCGACA------
---------GTACG-----ACCATGAAATCTTCTAGAGCTAGGAATAAAAGCATGCGTGAAGACTGCTTTGCGATGGATG
AGGACTTGATGCACGCGCTAGTGCATTGCTCTCATGCCAAATTATTTTGGGAACAAGCATATGAGTTACTTGGTGTTCGT
AGACCTCACTTGCACCCAGATACATGGTCCAGAGATATAATTTGTGACGCTCAGTTCACAGATATTGAAAGAGCTCAAAT
GATCTCCATTATGTGGGCAATATGGCACTCCAGGAACAGAATTACTCATGATGGAGAACAGCTTGACCCTCTTATAACAG
TGAGACGCATCAGAAAAGACTTGGCGGTGCTTGATATTCCTTCTGCACATGCTTCGGTCCTCCCTGGACATGGTTGGCGA
CCGCCAGATGCGGGCTTTGTGAAAATTAACACTGATGTCGCTCTCAACATGGATTCAGACAAGGTAGGAGCAGGTGGTGT
GGCACGCTCTGACTCTGCCTTGTTGGAAGCTTGGAGTAAACCACACGTTGGGGTAACGGATCCATTCATCGGTGAGACCC
TGGCAATTCGTGATGGTGTTATCTTTGCTACTCTACGGGTTTTTTCACATGTGATAATGGAGACAGACTGCCTGGAGGTC
GTCCACCTCTGGAACACTCGCCACGATATCTTTCTATAGTGGCACCTTTATTGTTAGAAATTGGAGAGCTAGCTTTCTCT
TTTTCTTCTTTTGTTATTCAACATGTAAACAGATCAGCCAATGTGCCGGCCCATCTTTGCGCGAAGCATGCTTGCTCGTT
GATGGTCATCGAAAGTTGAACTGGTTCTAGACCTACCTTCCTACTCACCAGCCTATTGACTGATGATGCTAGGAGCTCTT
TTGTTGAATAAAGGCTCTCAAAAAAAAGACTGCTGTACAAATTC-----ATCCGTATGGAGCAGCTCGCGGTCGCCATAG
CAATTGCCAA------------ACC---------TCCCACCGTTTGCACAGCCGCGCGCGGCGGAGGCCAGCAGAGCAGA
ACGGCAGAGTCGTT------------------------------------------------------------------
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------------------------------------------------------------------------------GC
CACCCACCATGTGCAATTGCCGGCTGCCGCCCGAATAATTCGCCGGTCCAGCGCAGCGACGGGCCCCGCACCAACTCCCC
CCACCCCACGTACCGGCGCCGGAAATCACTCGCGCACGCGCCATGAACCCAAGCCAGCCACGCGACAGCCGGCCGTCCTC
CCGTTCGCCAGCTTATATTAGGCAGGCCGGCCTAATCGCAGCTGTATATAAGCCGCTCCCACGCTTCTCCGTCGAAGCAC
CAACACCGGCGTCAATCAACAGCAACAAGGCGCCTTCCTCGCCCTCCTCAAGCAAGCGAGAAGCCAAGTCACGAAGATGG
CAGGGCAGTTGAAGGCCAAGATCCTCGCCGCGGCCGCCGTCGCCGTGGTCGTCGCCTCGTCACTGGTCGGCACGGCCTCC
GCGGCCGACGCGCCCGCCGTGGCGCCCACCTCCGGCGCCACCGCCGCGCCGCCCACCTCCGGCGCCACCGGCGCCGCCCC
GGCCTTCGCGGCCGTGTCGGTCGCGGCCGCGGCGTTCAGCTACCTCTTCTGCTAGGCGTGCGTCCATATGGCGCCCGGTT
-GGTGCCGCGGTGCGCGCGCG--CATGCTATTCTTTTCTGGGATTTGTTGTTGTGGATTCATGAACGTTCCGGTGCAATT
TCGTTTCTTGGTTCGAGCCTTCGAGGTCTGTAGTTGATCGTGTGTGTACAGTGACGATATTGAATTGAATTCATACGTTT
CATGTTCATTCGTTTGCGACTTGCA-------------------------------------------------------
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>chr3D_402
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------------------------------------------------------------------------------TT
TCATAGACATCGCAACCAAACAACTTT-CAGCTTTCCCACAGTTCTCAACTCACAATGACTTTCTCATACCTCA------
---------------------------CATCAGGTTTTTCGGAATCCATAGATCAACCAAACGGAGAATGCTGACTCATG
TGCTTTGTTCGT--TTTTAAGTTTTTAACCCTTAA--TTTTAAAAAGTTACTCCCTCCGTAAACTAATATAAGAGCGTTT
AAAATACTAAAGTAGTGATCTAAATGCTCTTATATTAGTTTACAGAGGGAGTACTAACT---TATCAATCGACAGTTCAC
AGTTGGATTGTATTGTACCACCATGAAATCTTCTAGAGCTAGTAATAAAAACATCCGT----------------------
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------------------------AAAGATCGCTGTAAAAAA-------ATCCGTATGGAGCAGCTCACGGTCGCCATGG
CAATCGCTAAACCTCAGGACACCCTCTCCCACAGTCCCACCGTTTGTACAGCCGCGC------------AGCAGAGCAGG
ACGACAGAGTCGTTGGCACTATACCTGGCCATACCTCGGGCCGGGCCTAGCCAAGCCCGACGCAAAAACCGCAGGCCCGA
GCCCGGCCCGGCCGTCGGGCCGGTTTTTCGGGCCCGAGCCCGGCCCGAACACGTAAAAGCCCGTCAGGCTTCGGGCCGGG
CCGGCCCGTCCTTTAGGAAAACGCAAAAACGATGGGCCCGGCCCGGTCTTCAGGCTCAAAATCTAGGCCTGAGCCCGGCC
CGGGAGCGGCATCGGGCCGGACCGGGTCGGGCTTTTTCGGGCCGGGTCGGGCCGGGCTGCCCATGGCCAGGACTAGTTGG
CACCCACCATGTGCCATTGCCGGCTGCCGCGCGAATAATTCGCCGGTCCAGCGCAGCGACGGGCCCCGCACCAACTCCCC
CCACCCCACGTACCGGCGCCGGAAATCACTCGCTCACGCGCCATGAACCCAAGCCAGCCACGCGACAGCCGGCCGTCCTC
CCGTTCGCCAGCTTATATTAGGCAGGCCGGCCTAATCGCAGCTGTATATAAGCCGCTCCCACGCTTCTCCGTCGAAGCAG
CGACACCGGCGTCAATCAACAGCAACAAGGCGCCTTCCTCGCCCTCCTCAAGCAAGCGAGAAGCCAAGTCACGAAGATGG
CAGGGCAGTTGAAGGCCAAGATCCTCGCCGCGGCCGCCGTCGCCGTGGCCGTCGCCTCGTCCCTGGTCGCCACGGCCTCC
GCGGCCGACGCGCCCGCCGTGTCGCCCACCTCCGGCGCCACCGCCGCGCCGCCCACCTCCGGCGCGACCGGCGCCGCCCC
GGCCTTCGCCGCCGTGTCCGTCGCCGCCGCGGCGTTCGGCTACCTCTTCTGCTAGGCGTTCGTCCATATGGCGCCCGGTT
TGGTGCCGCG--GCGCGCGCG--CATGCTCTTCTTTTCTGGGATTTGTTGTTGTGGGTTCATGAGCGTTCCGGTGCAATT
TCGTTTCTTGGTT--------CGAGGTCTGTAGTTGATCGTGTGTGTACAGTGACGATATTAAATCGAATTCATACATTT
CATGTCCATTCGTTTGCATTTGCATTCGTGTTTTTTCTTTTTGTGCATATGCGATCGAGTATATAGCAAAAAAAAACTAC
CACATTATAGACTATCATTTTAAAAAACTATCTTTTTTTTAATCTTTCAAAAAACTACCACAAAAGTGATAGGCTGTTCC
GAAAAACCCAAATGACCAGGCAATTTAGAAATAATCCGGTTTATGATAGGTCAGGCCCGCTCTTAAACAAATCGTTAGTT
GACTGTTTGTTTGACCGTTAACTTACATCTGGGCCACATGGGCCACATGTAAGTTCTCTCTCTCACCCTTATCTTCCTTC
TCCCCCTCTTCTTCCCTATCACTCTCCCGAGCCATTGCCGGGCACCATCAAGGGCTGCCGCAGCCAGCACCACACCCCGG
CACAGCCACGGCCGCCGCCACCTAGGCCGGCCACCACCACGCTATGGACACGAAGATGGAAAGAGGGCGGTGGATGGGCA
GCTCAGAGCGGCCCGCTGGTGGTCGGAGTCGAGCTCGTACTCCATGACAGCACCCACGCCGCCGCAGAGAGGACGGGAAG
GAGCTCCGCGCCGCCGGACGCCACCAGGACGCGCCTCGCTTAGCTTCGCGCCGCCGGACAGCTCCACGCCGGCAGGACGC
GGCTCTGCCTAGCTCCGCCCAGCAGAAAGGAGGAGGAGCTCCACACCGCCGCCGCTTAGCTCCGCGCCGCCGGACAGCTC
GAGCACGGGCGGAGAGCAGCCAAGGAGCACGGCCGGTTCCAGCCCGCCGCCGCTGCTGATTCCCGCCGGCCACGGCTGTT
GCAGCTAGTAGCCATCTACTCCGGGCGTATTGCTGGCCGGCCCTGGCGACGAGCTCGCCGGCGTGGTGCTGGCCGGCTCC
GGCGAGGACCCGATTGCTTCTTTTTTATTTTTCAGGACCCGATTGCTTTTTATATTCTTTTCAGGGGCTTGATTGCTTTT
AGTTTTCATTGTAGGGACCTGATTGCATGCCAAAAATATTTGGGCCCCACCTGTCATAACATGTCAATGGTCAATCTAAC
GGTCATACTTAACGGTCAACCCGATCTGTCATAATAACGTTTAAAGTTAAGTAATATAGTCATCAGTGCGACATAGTAGT
TTTTTGAAACAGCCCACCACTTTTGTGGTAGTTTTTTGAAAAGTTAAAAAAAGCGGTTGTTTTTTAAAACGATAGCTTGT
AATGTGATAGTTTTTTACTATATACTCATACGGGATCCCAACTCTCACGAACTCTGTTGACTGTGGAAGTGTGGATACAC
CTCCTGTTACGAACCATGTGGTGGCCAGAACAGCTAGAGATACATATCAGCAGCGATTTATTAGTTGCTGATGTCCTGTG
CTGTTTTCTTCATGG--AAAAAAATGCCATGGGATCATGTTCGCTCCCCTTAGCCGAGTCCATCAGAATTTTGATCGACA
AAATGAACCAGGCAGA----GACCATGAGTGCCTTTTCGGCCC-------TTCAGACGACACAACTTCTAAAAATCA---
AATACCC-----TATTACACAAATAT------------------------------------------------------
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----------AATCATTACGGT----------------------------------------------------------
-----------------------------------------------------------------------TATGCTAAA
TTTGATA-TTT-TTAAGGGAATGCTAAATTCGATTTTTT-GGACGGGCTTTCCTTCCAAGTCGATGTT------TAAAAC
TACAACTCTAAGTGTGCAATTAGGTGAAAATGTCAGATATGAAAACATAAGATCTATAAGCAGCGACAGATATAAAAACT
TCTTTTGAAATAAGAGACGTGATTTTTTGAGATTTCTTGAAAATAATGTTTTTTTAAAAAAATTCTACATATTTATGAAA
ATGTGAATACAGTTTAAATTCAAACTATTTTTGAACATGTGACATTTTGTTTCCAATTTTTTGTTTTTATAATTCCGAAA
TTATTTGGAAATGTGAACAAACTTTGGAAAAAAACATTTTTTTGAATAATTCAACATTTTGTGTAAATTGCATATCTTTT
GAAAATCCGAACATTTAGAACTGTGATTTTTGAAAATTATGAAAAAAATTGAATTTTGTTTTAAAAAAAATATGTTTTAT
AAATTTGTGAACAATTTGAAAGTTTCAATTTTTTTACAAAAAAAATGTGAACACAATTTTTAAAATCAGTACAATTTTTG
AAAACATGAACAATTTTTGCATGTCCCCAAGCATTGTACGAGAATCTGATTATTTTTTTGAAATAAGAAGATTTTTTAGA
TTTATGAGTTTAAAAAAACGAAGGAAAAGATAAAAGAAATAGAAAAAAGAAAAAGGTGGAAAGAAATAAAACAGCAAAAC
CGAAAAAACGAAGCTTCTAGAATATTCCTAAAACCAGTGAAAAAACAAACGGGAAAAACTAAAAAAATACTGCACTACAT
TGGATACACATGGGCCGACCCATCCCTGAGCACTCCTACGCGAATGTCCGGCTATTTACCGCAACACGCACCAAATAGGG
ACCCCCCTCCTCCTTACTCACTTTTGGGCTATAGTTACGCATGTCATCTCGCATACTACAGTTGGGAAAGTCCCCCATGC
CACATTGCGGCCCAAGTAGTAAGTAGTTCGACACAAAAACACATGTGCTTTTGTCTTCCTGTTCCTTGCTGGAACATCCC
GCCATAATGAGGGATAATCCATGGCTAAAGCATGCTCTTAGGGCCTTTTTGGATCCTCTCAAGCTCTCAAATTCGTGAAC
TCAACGCACTAAGCTGCTTCGGATGCGTGAGCTCCGCGGAACTAAATTCGAGAAGCTGAACCCTCCCCTAGTGTAAAAAG
TAAAAAGGAGAAGACAGGGAAGCCCAACTTCACGAAAATGAAGAGCAAGAGTTTAGCCAAGTTATAGTTCGAATTGCCAC
TACAAAAGTAAACATTTCACTGCCGCACCCCGTATCGCTCCAAGTGCTTCTCTCCTACCTCCCCTGAATCGGTACGCTGT
ACCCCTTCGCCTGCTCCTCTCTCTCCCTTGACATATCCCCTCGCCCCTAGCCAGCGCCGAAAGTGATGTCGAACATGCCA
GGACTCCCCTAGCTGGGTTGCCAGTGCACGACACACCGGGAGAAGCTGTCGCTCAAGCCGAACGCTCGCTGATCTCCAGG
AAGAGCCCGAAGCTAGCGAGGGTAGCCAAAGTTGCGGATTTGGCGAAGCTGGGAGAGGTTCCAAACATGCCCTTAGTCTT
TCCTGCCAAACTCATATGCGAGACCTAGCCAATAAAACCACCCCATGGGAGGAAGGATGTGAAGTCGACAGTAGTGCTAA
GAGTCAGGTAACCATATTTTTGATGCCCTCTAGGCAAAGTTTGTGAAGTAGATGAATTTCGCTGGGTGGCAGTGCCTATA
TTTGGTCAAAAAATTTGGCCTAATTTCAAAACGGTTCATATTGTTCTTAAAGAATAATTTTCACTTGCTATTGTAGGTCC
TATTGAAATGGTGGAAAGCCTTCTTTCTTACGCATGGACCATTTTTTGTTTGAATCGTTTGACTATCGGCAAGCATTTGA
AAGAAATTTGAGGGCCAATTTCCCCCGAAAATTTCACGAAATCAAAATTCCAGTGAGGTGCAAAACTCTTTTACAAAACC
AGAGAACCCTAGATAGAGTAGCAATCAAGCGCTAAGCCGGGACGTGCTTTGAGAAATCATCATCTGTGAAGAGAGTGTGA
CTTTGATTGATCATTCAATCGTGGAATGATGAAGTCCTAACTAGTCGCCGGTCCGTGGCCTGAAACTAGACCGACGCTCT
GTCCTCCCTCCTGTTCTTTCGTATCGACTTGATCTAGTATCCTGATGACATCACATCAAGGTATATATTATCTGTGAACC
AACTTGTGATTGGATGGTTAGAGGGACAATGATATCCCCAGCTCACCAGGGTTCAAGTCCTGGTGCTCGCATTATTTTTA
ATTTATTTCAGGATTTCCGGTGATGCGCTTTTAATGGGAGGAGAGAATTTCCGACGATGCGCTTTCAGTGGGAGAAGACG
TTCCCGTCGACGACGAGACGCCTACGGTGACTTCGTAAATCTCAAGATGATATGCCGGCTCAGTCTCTCGGAGGTGCTCA
TAAAGATAGGTGTGCGTGTGTGCGTTCATAAGAGTGAGCGTATGCACATATGTATGAGTGCTTGCGTCTGTACTGTGTTA
AAGAATGATATATATGATGTCAGCCCAGTTTTAGCAAAACAGATACTTCCCCGATTCAAATCAATTGTATTAAAGCAGCA
ACAAGTAATTTGAATCGGAGGAGGGAGTACATAATCATTTTGAAGATAAATACGACGTGTATTAATTCATAGTATGTAGC
TGTGTACCAAAGCGCAGTGCGCGCGTCAACCGATCAGAACATAACCCGTACATGGCACATCATCAGCTAATTAAAATAGT
GACCATTGCCCGCAAAAAATAAAAATAAAATAATTAAAATAGTGACCAAGGCGGGAACACGAGTACACGACTGCCGAGGG
CCGGTCCAGCCAGCAGACGCGCGCGACGCAGCTTAGCAGAAGAGGTACCCAACGGCGGCGGCGACGAGCGTCCCGAAGGC
GAAGGCGGGGGTGGTCGCGGCGGCTCCGGTGGCCGGGCTGGGAGCCGGCGCCTCAGCAGCCATGGCCATGCCCACCACGG
ACGAGGCCACGACGGCGGCGGCGAGGATCCTGAGCTTGAGGGTGGCCGCCATTTCTGCTAGGTAGCTAGCTTCTCGGTCG
ACCGATACTAATTGGGAATTAGTCGAAGATGTATAAGCACTGAAAAAAGAACAGGAAGCTGGCGAGCTGAATGGTTTGAG
ATGGGAAGGAAGAGCGGAGCACGTCGGGTATATATAGCCGCCATCGGTAGGGCTTTGGCGTGCTGTGTTGTGGAGGGCTA
GCCATGAAAAGGAGGATCATTGGCTGGAGCAGCTGCTTTCGGTCTGTCCGCCTTTCACAGGCTGTGCGATCGAGTGGGCA
GTTGTTTAGGCTTTGCTGTGATCGCCGAATGGGTGATTGAGGGTGCACAATGATTAGTCGTTGTGGTTTGTTGCTTCTGA
TTTGTTATTTGGTTGGGTTGAGCACTGGCGCACTGCCATGTGCAACTGCCAACTGGTACCTATAGTTATCATCGATGTAT
TTTTTAACTTAGTTATCATCGATGGTCTATATTTCAGCTCTCTGTTAAAAAAGAAGAAGAATGACCCCCTGCCTCTGCAT
ACGGGCGATGCATCCACCCACTTTATTAATTATTTACAAAGACCTTACAAAGTAATACATCAGTAATTCTGAAGCCATCA
TCTCGTCAAGGTGTTGTGCCATCGCCTAGCATGTCCATCCAACACTCAAGTAAGAGGGGAAATTATCCATGAAATATATA
TTTTTAAACTTAAGTTTGAAAAAAAATGTTTGCGTAGTGTTGAAAATGTGGGTGCAACTTCTACAAATGTTGATAGCATT
TGAAAAAAAAGTTCCAAGACGTATTTGGAAAAACTGTTAAACACATATTCAAACAACAATGTTCAAACAAATGTGATTGA
AAAATTGTTAATCATCAATTTAAATTTTTTAAATGCGTATGAATTCTAATGTATATGAAAAATGTACGTGTATGAAAAAA
AGTAGACATCGAAACATACATATGAAAAATATTTATCGTATATTTACCAAATGTTAAACGTGTATAGAAAAATATTCCTG
ATGAGTAGGGGCTACGTAGTCGCTTCTCCCCTAAAAAATTAGGGTTCCTCCCGCGTCTGTTACTTTTTCTCCCGTTGCAA
CGCAAGGTCTCCTTTGCTAGTAAAACAAATATAATCTTTACGGTTATGCTACATTTGATTTTTTTAGCACAATCCTAAAT
TCAATTTTTCAGAACGGATTTCCTTCCAAGTCGATTGTTAAAACTACAACTCTATTTAAGTGTGCAATTAGGTGAAAATG
TCAGATATAAAAACATAAGATCCATAAGAAGCGACAG--ATAAAAATATCTTTTGAAATTACAAACTTGA---TTTTTTC
AAATTTCTTGAAAATTATGATTTTGAAAAATGTTCTAACTGTTTATTATAAATGCAAATAAAATTTTAAATTCAAACATT
TTT---TGAACATTTGAGATTTTGTTACCAAATTAGTGTTTTAATAATTCCAAAAATTATTTGAAAATGTGAACAAACTT
TGAAAAC-------CATTTTTTTAAATAATTCAACATTTTATTAAAATCGAATATCT-------TTCCGAACATTTATTG
GAAATGTGATTTTTTTTTAAATTGTGAACAAATTTA-GAAAATGAAAACA-TTTTCTGAAAATTTGTTTTCTTA---TTT
ACAAAAAATTTTGAAGTTTCAATTTTTT----------AAATGTGAAC--------------------GA-TTTTTTTAA
AACATGAACAATTTTTTAA-------------------TGTCCCCAAAAATTATATGATAATATGTGTGTTTTTAAACAA
GA---------------
>chr3B_1703
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------------------AAAAAATGCCATGGGATCATGTTCGCTCCCCTTAGCCGAGTCCATCAGAATTTTGATCGAAA
AAATGAACCAGACAGAGATGGACCATGAGTGCCTTTTGGGCCCTGCAGAGTTCAGACGGCACAACTTCTAAAAATCATCA
AATATCC-----TATTACACAAATATTTTTGTTGTTGTTGAGGAAAAGCCGTCATGACGGTTTATATTTCATGAGAAAAG
AGTGATACATCATTTGTTATTACATCAACTAAGAATCCCAGAGGTTCAGATTTCCAAACAATGGTTCGCGTCAGCTCCGA
GTTCCTAGCCACTACATCTGCCACCATATTGGTCTCCCTAGGACAATGAGTAAAAACTATGAAAATAAAATTACTAGCTA
GAAAATAACATTCTTCATAAATCGCGCTGCTAGCTCAAGCGAATTCCCGCTATTCTGCATGATCTCAATGACCTCCATGC
AGTCCGCCTCCACATGTATCTTGTTACACCCAACCTCATTCTCGAGTATGAGTCCATCTCATAGTCCTCTTGCTTCCGTC
GTCGGCGCATCTTCCACGAAGGGTATATTACTACACGCAACTGCAATGAAGAAGCCATGATCGTCGCGAAGCACTGCACC
TGTACTTCCCGTGCCATTATCATAATCGAAGGTGGCGTCAACATTTAGTTTGACGATCCCCTCTGCTGGTTTACTCCATC
CGTGCCTCTTAATCTTTGCGCTCTTCAACTTTGCCTGTGAGAAATTTTGCACAAGTGTTGAGATTGCCTGAGCCGACCTG
GCTGTTTTATACATATATTCTCCATGTGTGTATTTATAGTGCTCCCACCATACATACCAGGTTGTAGTTGCTATGCTAAA
TTTGATA-TTT-TTAGGGGAATGCTAAATTCGATTTTTG-GGACCGGCTTTCCTTCCAAGTCGATCTT------TA----
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----------------------------------------------TAACTCTATTTTAGTCTGCAATTAGGTGAAAATG
TCAGATATAAAAACTTAAGATCCATAAGCAGCGACATATATAAAAACATTTTATGAAATTACAAACATGTTTTTTTTTTG
AAATTTCATGAAAATTGTGATTTAAAAAATG----TAAACATTTATTGAAAATGCAAACACAATTTTAAATTCAAAGTAC
TTT---TGAACATGTGACATTTTGTTACCAAATTTGTGTTTTTTT-ATTCCAGCAATTATTTGGAAATGTGAACAAACTT
TGGAATTACACAGACACATTTTTG-ATAATTCAGTATTTTGTGAAAAACGAATATCTTTTGAAAGTCTGCACATTTTTTG
GAAATGTGTTTTTTGA--AAATTGTGAACAAAATTT-GA---------TTTTTTTTTGAAAATATGTTTTTTTAAATTTT
GCGAACAATTCTGAAGTTTCAATTTTTTTTGAGAAAAAATATGTGAAC--------------------AC-AATTTTAAA
GACCTGAACAATTTTTT---------------------------------------------------------------
-----------------
>chr3A_1835
TCCTATGCTAG---------------------------------------------------------------------
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--------------TTACACAAATAT------------------------------------------------------
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----------AATCTTTACTGT----------------------------------------------------------
-----------------------------------------------------------------------TATGCTAAA
TTTGATA-TTTGTTAGCAGAATCCTAAATTCAATTTTTC-GGAACGGATTTCCTTCCAAGTCAATTTTTAAAACTA----
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----------------------------------------------CAACTCTATTTAAGTGTACAATTAGGTGA-AATG
TCAAATATAAAAACATAAGATCTATAAGCAGCGACAG--ATAAAAACATCTTTTTAAATTACAAACTTGA---TTTTTTC
AAATTTCTTGAAAATTATGATTTTGAAAAATGTTCTAAACATTTATTAAAAATGCAAATAAGATTTTAAATTCAAAAAA-
--T---TAAACATGTGACATTTTGTTACCAAATTAGTGTTTTTATAATTCAAAAAATTATTTGGAAATGGGAACAAACTT
TGGAAA---ACAAT--TTTTTTAAAATAATTAAACATTTT-TGAAAATTGAATATCT-------TTCCGAACATTTATTG
GAAATGTGGTTTTTGA--AAATTGTGAACAAATTTTGTAAAATGAATTTTTTTTTCTGAAAATCTTTTTTCTTA---TTT
GCAAACAATTTTGAAGTTACAATTTTTT----------AAAATGTGAGCGCAATTTTTTTTTAAATAAGA-TTTTTGTAA
AACATGAGCAGTTTTTTAA-------------------TGTCCCCAAAAATTATATGATAATATGTGTGTTTTT------
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>chr3A_1845
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--------------TTACACAAATAT------------------------------------------------------
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----------AATCTTTACGGT----------------------------------------------------------
-----------------------------------------------------------------------TATGCTAAA
TTTGATAATTTTTTAGCGGAATCCTAAATTCAATTTTTC-GGACTGGCTTTCCTTCAAAGTCGATTTTTAAAACTA----
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----------------------------------------------CAACCCTATTTTAGTGTGCAATTAGGTGAAAATG
TTAGATATAGAAACATAAGATCTATAAGCAGCAAAAGATATAAAAACATCTTTTGAAATTACAGACGTGA---TTTTTTG
AAATTTCCTGAAAATTATGATTATGAAAAATGTTCTAAATATTTATTGAAAATGCAAATAAAATTTTAAATTTAAACAA-
--TTTCTGAACATGTG-CATTTTGATACCAAATTTGTGTTTCCTAATT--CCAAAATTATTTGGAAATGTGAACAAACTT
TGGAGA---ACAAACAAATTTTTGAATAATTCAACATTTTCTGAAAATCTAATATCTTTTGAAATTCCGAACATTTATTG
GAAATGCGATTTTTGA--AAATTGTGAACAAATTTTGGAAAATGAAAACA-TTTTCTGAAAATCTGTTTTCTTA---TTT
GCCAACAATTTTTAAGTTTCATTTTTTT----------AAATGTGAAC--------------------GTAATTTTTTAA
AACATGAACAATTTTT----------------------------------------------------------------
-----------------
>SNPs
SSSSS-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
------------S---------------------------------------------S-----S-------------S-
--------S---------------------------------------S-----------------------------S-
S-------------------------------------------------------------------------------
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----S-----------S-------------------------------S-------------------------------
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----------------------------------------S---------------------------------------
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-------S------------------------------------------------------------------------
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------------------------------S----S------SSSSSSS-------------------------------
----S------------S-----------------------S--------------------------------------
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----------------------------------------------S-------------------------------S-
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--------------------------------S--S-----------------SS-----SS------------------
------------------S-------------------------------------------------------------
------------------------------------------------------------------------S-------
------------------------------------------------------------------S-------------
----------------------------S---------------------------------S-----------------
---------------------SS------------------S---------------------S--------------S-
--------------------------------------S-----------------------------------------
---S------------------------------------S---------------------------------------
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--------------------------------S--------------------S--------------------------
--------------------------------------------S-SSSSSSSS--------------------------
---------------SS----------------------------------------S----------------------
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-------SSSSS--------------------------------------------------------------------
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---------------------------------------S-------------------------S--------------
--S-----------------------------------------------------------------------------
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---------------S---S---------------S------------------SS----------S-------------
--------------------------S----S---S----------S---------------------------------
------S------------------------------------S------S-------------S---------------
---S-------------------S--S--------------S------SS-S---SSS--------------SS--S---
-----------SS----S----------SSS-S-----------------------------------------------
--S-S--------------SSSSSSSSSSSSSSSSSSS---------SS---S--S--S---S--SS-------SS-S-S
S-SSSSSSSSSSSSSSS
>forward_130
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------------------------------CCGAGGACATGGGAGAAGTC------------------------------
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>reverse_3321
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----------------------------------------CTGTGCATACGCGATCCCAA--------------------
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-----------------
