>input_sequence_78673
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-------------------------------------------------------ATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAAGATTCAAAAGATATTATAGTATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATCATACTGACCCAATGGCTAAAGACTATATCCAAATGAGAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TATCCAAAATATAAGACATATCTAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGCGAATACATAGATCAAGAGATGGATAAAAGATTTGAAGAATTTTCAAAAATAGTAAAGAAA
GAATTGAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAATTTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGTAG----------------
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>chr1D_1_TraesCS1D01G326000
CATCTATAAGATCATATTGCAAAGAAAATATCAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCAATTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGATAACTTAGGAAAGCTAGCAGGACCTTTATATGATAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTTAAAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAAACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACCCAATAAATACTCTCCAAAAGCAGATG-GAAAAATATGCAGATATGCTTCAGGT-GTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTACAG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGATCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTAG-----AGCATATTAAGGGGAAGGATAACACCTTACCTGACAT
ATTCTCTCGTGCATCAAATTTGCAGAAATGAGGAAAGGATTATTTGCCAACAGGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTAAATATTTTTCAGCCAAATACATTCAATTTCAAGCCAAAAACCCATATCAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAATTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAGG---ATA-TTTTTATCAATTCTCAATAGT
TTGGCAGAATATTTTAATGAATTAA--ACAAAAATT-TGCCAAAGCTAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTCTATTTGATGGAAATAAACCTGGCATACATTTGGAATGGGAAAATATTATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAAGATTCAAAAGATATTATAGTATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATCATACTGACCCAATGGCTAAAGACTATATCCAAATGAGAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TATCCAAAATATAAGACATATCTAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGCGAATACATAGATCAAGAGATGGATAAAAGATTTGAAGAATTTTCAAAAATAGTAAAGAAA
GAATTGAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAATTTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGTAGCGACCTGAATAAAGCC
CAAATTGCCTATATTGATATTGCTATCAATTATTCGGGCGCGGAAGACTTATACCCGACCCGAATATT-GATAGAAATTC
CAAGAATAGATATTTTGAATATTGATAATATACCCGACCCGAATATTGATAGAAATTCCAAGAATAGATATTTTAAATAT
TGATAAAGTATTATCAATCATATGGGTAGGGAAGACCCCCTGTAAAAAAAACAATGTTAAAAATTTAAGCAGCCTTGGCA
CGTATGTACGCATACACTGGCAAGGATTCTTGAAGGCAGAAGAAGCTCTGAAGGCTAATCGCATGAAGATCTATATGGTC
GAAGAGTAAAAACTGGTACACAGAGGCCAGCCATTTATTCACCGAGAGACAATGCCACGTGAAGAAAGCAAAGTTTCTTG
AAGATTGAAGTTTGTCGGCACTCTCTCTCGCACTTTTCTATATTATTAGAAGGACACGCATGTACCCTAGTAGGACTTTT
CTATATTATTAGAAGGACACGCATGTACCCTAGTAGGACAAGCGTGCATACTACCGTGTGTGAAATAAGTGAAGGATGGC
TCCCGAAGGCCTCCCTAGCAGCCACCCACTAGTAGAAAACAGGGCTTTCGTTCGGGCCTGGCCAGCCCATTTGTCCCGGT
TCTGCACGAACCGGGATCCATGGGGTGCATTAGTCCCGGTTCATGAGCCCAGGGGGCCGGCCGGGGCCTCGTGGGCATTG
GTCCCAATTCGTTTCGACCCATTTGTCCCGGTTCTAGGCACGAACGGGGACCAATGGGCCTCACTCCTGGCCCACAGCCA
TTGGTCCCGGTTCGTGGCTCGAACCGGGACAGAAGGGGGAGCTTTAGTCCCGGTTCCAGCCACGAACCGGGACAAATGAG
TTGCCTATATATACCCCATCGCCGCAGCAGAGCACTCCACGGTGCTCTGTTTTTTGCTGGCCGGCGAGGGGGAGGGCATT
GGGTTCTCTAGCTCACCTCCTATGC
>chr2D_2
-ATCTACAAGAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCAGTTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGACAACTTAGCAAAGTTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATGAAACTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTTGAAA-CCCCT
AGAATTGCCTCTAGAAGACGATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACTCAATAAATACTCGCCAAAAGCAGATG-AAAAAATATGCAGATATGCTTCGGGAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTACAG
TGCGAACAAACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTAGTTTTGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGCAGAAATGGGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGAAAATGTTTCAGCCAAATACATTCAATTTCAAGCCAAAATCCCATATTAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAACTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAGAGG---ATATTTTTTATCAATTCTCAATAGT
TTGGCAGAATATTTTAATGAATTAA--ACAAAAATT-TGCCAAAGCTAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTAGAATGGGAAAATATAATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTAGAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAGATGAAAAGAGGCATACCTGCTTCACCAACTCCCGCAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TCTCCAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGGATAAAAGATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTGAAAGAACAAATATTAAAAGAATTAAGGCATGAAATGGACGAAATTTTTGAAGAAATAAAGAAAGAATGTGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGCAGCGACCTGAATAAAGCC
CAAATAGCCTATATTGATATTGCTATCAATTATTCGGGCGCGGAGGA-CTATACCCAACCCGAATATT-CATAGAAATCC
CAAGAATAGATATT------------------------------------------------------------------
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>chr2D_2
-ATCTACAAGAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATACAAAGGTTTTACAGCACTTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGATAACTTAGCAAAGCTAGCAGGACCTTTATATGCTAAATTAAGAAAAA
ATGGTCAAAGATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAAGAAAAAGTCAAGAATTTAAAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AGCCCAATAAATACTCTCCAAAAGCAGATG-AAAAAATATGCAGATATGCGTCAGGAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTACGG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGGTCTTA
TTTGAAGACAGC-TAGCTGGGAATGGTTATAAAGTTATTTTTGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTCTCATGCATCAAATTTGCAGAAATGAGGAAAGGATTATTCGCCACCAGGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGACTGAAAGTATTTCAGCCAAATACATTTAATTTCAAGCCAAAAACACATATCAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAATTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAGG---ATATTTTTTATCAATTCTCAATAGT
TTGGCAGAATATTTTAATGAATTAA--ACAAAAA-TTTGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTCATATTTGATGGAAATAAACCTGGCATATATTTGGAATGGGAAAATATTATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAGTATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATAGTATTGACCCAAAGGCTAAAGACTATATCCAAATGAAAAGAGGCATACCTGCTTCACCAACTCCTACAAA-GG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TCTCCAAAATATCAAACATATCAAGAATGCCTTCTAAAGGG
GGCTTGACCCTTTAGACAGCGAATACATAGATTAAGAAATGGATAAAAGATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTGAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGATGAAAAATTTGAAGAAATAAAGAATGAATGTGATCA
AAGATATGATTTCAATCTGTTAAACGATGATAATATGGACATAT--ATAGCAGGGCATGGACAGCAGCCTGAATAAAGCC
CAAATTGCCTATATTGATATTGCTATCAATTATTCGGGCGCGGAGGACCTATACCCGACCCGAATATT-GATAGAAATTC
CAACAATAG----------------------------------------------------------ATATTTTAAATAT
TGATAA--------------------------------------------------------------------------
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-------------------------
>chr2D_2
-ATCTACTAGAGCATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCAGTTCTT
AGGAATTGTAAACTATGGGCAAAACTATATAGACAACTTAGCAAAGTTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTTAAAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACCCAATAAATACTCCCCAAAAGCAGATG-GAAAAATATGCAGATATGCTTCGGGAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGAAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTATAG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACTAGAAGATGGATCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTAGTTTTGAGCATATTAA-GGGAAGGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGCAGAAATGAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGAAAATGTTTCAGCCAAATACATTCAATTTCAAGCCAAAATCTCATATTAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAACTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAAG---ATATTTTTTATAAATTCTCAATAGT
TTGGCATAATATTTTAATGAATTAAACAAAAAAATT---CCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAGCCTGGCATATATTTAGAATGGGAAAATATAATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAGATGAAAAGAGGCATACCTTCTTCACGAACTCCCGCAAAGGG
GGAGGCGTCAAGCTCAAAAAATATAAAGAATGAAGAG--TCTCCAAAATATAAGACATATCAAGAATTCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAAGGGATAAAATATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTGAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAAATTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGAACATAGCAGGGCATGGGCAGCGACCTGAATAAAGCC
AAAATAGCCTATATTGATATTTCTATCAATTATTCGGGCGCGGAGGA-CTATACCCAACCCGAATATT-GATAGAAATCC
CAAGAATAGATATT------------------------------------------------------------------
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-------------------------
>chr3D_2
-ATCTACAAGAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGTAGTTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGACAACTTAGCAAAGTTAGCAGGACCTTTATGTGCTAAATTAAGGAAAA
GTGGTCAAAAATACTTCAATTCCAAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTTAAAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGTGATTCTAAAACAAA
AACCCAATAAATACTCCCCAAAAGCAGATG-AAAAAATATGCAGATATGCTTCGGGAAGTTACGAATTAAAGACAGTGAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATGTAGGATTTAAAGAATTTACAG
TGCGAATAGACCGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATGAAGTTATTTTTGAGCATATTAAGGGGAAGGATGATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGCAGAAATGAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGAAAATGTTTCAGCCAAGTACATTCAATTTCAAGCCAAAACCCCATATCAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAATTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAGG---ATTTTTTTTTTCAATTCTCAATAGT
TTGGCAGAATATTTTAATGAATTAA--ACAAAAA-T-TGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTGGAATGGGAAAATATAATGATTGAAAAATTAGATGAAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAAATGAAAAGAGGCATACCTGATTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TC--CAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGGATAAAAGATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTGAAAAAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAAATTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAACCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGCAGCGACCTGAATAAAGCC
CAAATTGCCTATATTGATATTGCTATCAATTATTCGGGCGCGGAGGACCTATACCCGACCCGAATATT-GATAGAAATTC
CAAGAAAAG----------------------------------------------------------ATATTTTAAATAT
TGATAAGGTATTATCAATCATATGGGCACGGAAGACCCCATGTAAAAAAAT---TGTTGAAAATTTAAGCAGCCTTATCA
TGTATGTACGCATACACTGGCAAGAAATCTTGAAGGCAGAAGAAGCTCTGAAGGCTAATCGTATGAAGATCTGTATGGCC
GAAGAGCAAAGAATGGTACACAGAGGCCAGCCAATTATTCACGGAGAGACAATGCCACGTGAAGAAAGCAAAGTTTCTTG
AAGATTAAAGTTTGTCGGCACTCTCTCTCGCACTTTTCTATATTATTAGAAGGACACGCATGTACCCTAGTAGGACTTTT
CTATATTATTAGAAGGACACGCATGTACCCTAGTAGGACACGCGTGCATACTACCGTGTGTAAAATAAGTGAAGGAAGGC
TCTCGAATGCCTCCCTAGCAGCCAACCC----------------------------------------------------
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-------------------------
>chr6D_2
-ATCTACAAGAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCAATTTTT
AGGAATTGTAAACTATGCGC-AAACTATATAGACAACTTAGCAAAGTTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTAAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTTAAAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACCCAATAAATACTCCCCAAAAGAATATGAAAAAAATATGCAGATATGCTTCGGAAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTACAG
TGCAAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTATTTTTGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGTAGAAATGAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGGAAATGTTTCAGCCAAGTACATTCAATTTCAAGCCAAAATCCCATATTAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAACTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAAGGATA--TTTTTTATCAATTCTCAATAGT
TTGGCAGAAAATTTTAATGAATTAA--AAAAAAATT---CCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTGGAATGGGAAAATATAATGATTGAAAAATTCGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAAATGAAAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAG--TCTCCAAAATATAAGACATATCAAGAATGTCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGGATAAAAGATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTGAAAGAAGAAATAATAAAAGAATTAAGGCATGAAATGGACGAAAAATTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGCAGCGACCTGAATAAAGCC
CAAATTTCCTATATTGATATTGCTATCAATTATTCGGGCGCGGAGGA-CTATACCCAACCCGAATATT-GATAGAAATCC
CAAGAATAGATATT------------------------------------------------------------------
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-------------------------
>chr6D_2
-ATCTACAAGAACATATTGCCAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGTAGTTCTT
AGGAATTGTAAACTATGGGCGAAACTATATAGACAACTTAGCAAAGTTAGCAGGACTTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTT-AAA-CCCCT
AGAATTGCCTCTAGAAGACAATTATTTTGTAATTGAGACTGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AGCCCAATACATACTCCCCAAAAGCAGATG-AAAAAATATGCAGATATGCTTCGGGAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGCCTATATCTAGGATTTAAAGAATTTACAG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAACTCAACCAGAAGATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTATTTTTGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTTTCGTGCATCAAATTTGCAGAAATGAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGATGAAAATGTTTCAGCCAAATACATTCAATTCCAAGCCAAAAACCCATATCAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAATTTTTTGTTCCAATATACTCTCAAGAGAGAGGAAAAAGG---ATATTTTTTATCAATTCTTAATAGT
TTGGGAGAATATTTTAATGAATTAA--ACAAAAATT-TGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTGGAATGTGAAAATATAATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAAATGAAAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAATCTC--CAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGGATAAAAGATTTGAAGAATTTTCAAAAATAATAAAGAAA
GAATTAAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGATGAAAAATTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAATGATGATGATGATCATATGAACATCGCAGGGCATGGGCAGCGACCTGAATAAAGCC
CAAAATGCCTATATTGATATTGCTATCAATTAT-CGGGCGCGGAGGACCTATA-C-CGACCCGAATATTGATAGAAATTC
CAAAAATGG----------------------------------------------------------ATATTTTAAATAT
TGATAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------
>chr6D_2
-ATCTACAATAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAG-TTTTACAGCAGTTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGACAACTTAGCAAAGCTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTT-AAAACCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACCCAATAAATACTCCCCAAAAGCAGATG-AAAAAATATGCAGATATGCTTCGGGAAGTTACAAATTAAAGACGGTAAT
T-ATATTGATAGGAAAATCCTTGCAGTTGTAAATGCAATAAATGTATTTAGGCTATATCTAGGATTTAAAGAATTTACAG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAATCAGAAGATGGGTCTTA
TTTGAAGACATCATAGCTGGG-ATGGTTATAAAGTTATTTTTGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGCAGAAATAAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGAAAATGTTTCAGCCAAATACATTCAATTCCAAGCCAAAAACCCATATCAAGCTTGAGGAAGCTTAAAGAT
GCATATTGGATAATTTTTGGTTCCAATATACTCTCAAGAGAGATGAAAAAGG---ATATTTTTTATCAATTCTCAATAGT
TTGGCAGAATATTT-AATGAATTAA--AAAAAAATT-TGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTGGAATGTGAAAATATAATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATTCAAATGAAAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAATCTC--CAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGAATAAAATATTTGAAGAATTTTCAATAATAATAAAGAAA
GAATTAAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAAAATTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAATGATGATGATGATCATATGAACATCGCAGGGCATGGGCAACGACCTGAATAAAGCC
CAAAATGCCTATATTGATATTGCTATCAATTATTCGGGCACGGAGGA-CTATACT-CGACCCGAATATTGATAGAAATCT
CAAGAATAG----------------------------------------------------------ATATTTTAAATAT
TGATAAGGTATTATCAATCATATGGGCAGGGAAGACCCCCTGTAAAAAAA------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr5D_2
-ATCTACAAGAACATATTGCAAAGAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCATTTCTT
AGGAATTGTAAACTATGCGCGAAACTATATAGACAAC------AAGTTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTT-AAAACCCCT
AGAATTGCCTCTAGAAGACAATTATTTTATAATTGAGACAGATGCATCTAAGGTAGGATGGGGTGCGATACTAAAACAAA
AACCCAATAAATACTCCCCAAAAGCAGATG-AAAAAATATGCAGATATGCTTCGGGAAGTTACAAATTAAAGACGATAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTTAGGCTATATCTAGGATTTAAAGAATTTACAG
TGCGAACAGACTGTGAAGCTATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAAATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTATTTTTGAGCATATTAAGGGGAAAGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTTGCAGAAATGAGGAAAGGATTATTCGCCAACAAGGATGAATATCTCTTCTTTGGAGAAGA
AAATAGGCTGAAAATGTTTAAGCCAAATATATTCAATTTCAAGCCAAAATCCCATATTAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAACTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAATGATATTTTTTTTATCAATTCTCAATAGT
TTGGCAGAATATTTTAATGAATTAA--ACAAAAATT-TGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCTGGCATATATTTGGAATGGGAAAATATAATGATTGAAAAAGTAGATGCAAAAA
TAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAAGACTATATCCAAATAAAAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGGCATCAAGCTCAAAAAATATAAAGAAGGAAGAGTCTT--CAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCTTTAGACAGTGAATACATAGATCAAGAAATGCATAAAAGATTTAAAGAATTTTCAAAAATAATAAATAAA
GAATTGAAAGAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAAATTTGAAGAAATAAAGAAAGAATGCGATCA
AAAATATGATTTCAATCTGTTAAACGATGATGATGATCATATGGACATAGCAGGGCATGGGCAGCGACCTGAATAAAGCC
CAAATTGCCTATATTGATATTGCTATCAATTATTCGGGCACGGAGGA-CTATACCGCGACCCGAATATTGATAGAAATCC
CAAGAATAG----------------------------------------------------------ATATT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4D_2
-ATCTACAAGAACATATTGCAAATAAAATATTAGAGTTTCCTGATAATATGAGTGATAAAAAGGTTTTACAGCAGTTCTT
AGGAATTGTAAACTATGCGCAAAACTATATAGATAACTTAGCAAAGTTAGCAGGACCTTTATATGCTAAATTAAGGAAAA
ATGGTCAAAAATACTTCAATTCTGAAGATATAAAATTAGTAAAGGCCATCAAGGAAAAGGTCAAGAATTT-AAAACCCCT
AGAATTGCCTCTGGAAGACAATTATTTTATAATTGAGACAGGTGCATCTAAAGTAGGATGGGGTGCGATACTAAAACAAA
AGCCCAATAAATACTCTCCAAAAGCAGATG-AAAAAATATGCAGATATGCGTCAGGAAGTTACAAATTAAAGACGGTAAA
TAATATTGATAGGGAAATCCTTGCAGTTGTAAATGCAATAAATGCATTAAGGCTATATATAGGATTTAAAGAATTTACAG
TGCGAACAGACTGTGAAGCGATATGTCGATATTACAATAAAATTAATAGTAAGAAAAGCTCAACCAGAAGATGGGTCTTA
TTTGAAGACACCATAGCTGGGAATGGTTATAAAGTTATTTTCGAGCATATTAAGGGGAAGGATAATACCTTACCTGACAT
ATTTTCTCGTGCATCAAATTAGCAGAAATGAGGAAAGGACTATTCACCAACAGGGATGAATATCTCTTCTTTGGAGGAGA
AAATAGGCTGAAAGTATTTCAGCCAAATACATTCAGTTTCAAGCCAAAAACCCATATCAAGCTTGATGAAGCTCAAAGAT
GCATATTGGATAATTTTTGGTTCCAATATACTCTCAAGAGAGAGGAAAAAGG---ATATTTTTTATCAATTCTCAATAGT
TTGGCGGAATATTTTATTGAATTAA--ACAAAAATT-TGCCAAAGCCAGAAAAGATTGAAATACCAAAAGGAGAAACACT
ATATCTTATATTTGATGGAAATAAACCAGGCATATATTTGGAATGGGAGAATATTATGATTGAAAAATTAGATGCAAAAA
GAAAAGGACAAGATTTAACATTCAAAAGATATTATAATATAGATGATGCCTTACTTTGGGCAAGAAAGGTATTAGGACCA
GATTATTATATTGACCCAAAGGCTAAATACTATATCCAAATGAAAAGAGGCATACCTGCTTCACCAACTCCCACAAAGGG
GGAGCCATCAAGCTCAAAAAATATAAAGAAGGAAGAGTCTC--CAAAATATAAGACATATCAAGAATGCCTTCTAAA-GG
GGCTTGACCCATTAGACAGTGAATACATAGATCAAGGAATGGATAAAAGATTTGAAGAATTTTCAAATATAATAAAGAAA
GAATTGAAATAAGAAATATTAAAAGAATTAAGGCATGAAATGGACGAAAAATTTGAAGAAATAAAGAAATAATGCAATCA
AAAATTTGATTTCAATCTGTTAAACGATGATGATGACCATATGGACATAGCAGGGCATGGGCAGCGACCTGAATAAAACT
CAAATTGACTATATTGATATTGCTATCAATTATTCGGGCACGGAGGA-CTATACC-CGACCTGAATATTGATAGAAATTC
CAAGAATAA----------------------------------------------------------ATATTTTAAATAT
TGATAAGGTATTATCAATCATATGGGCAGGGAAGACCCCCTATAAAAAAA-CAATGTTGAAAATTTAAGCAGCTTTGGCA
TGTATGTACGCATACACTGGCAAGGATTCTTGAGGGCAGAAGAAGCTCTGGAGGCTAATCGTATGAAGATCTGTATGGCC
AAAGAGAAAAGACTGGTGCACAGAGGTCAGCTAATTATTCACCAAGAGACAATGCCACGTGAAGAAAGCAAAGTTTCTTG
AAGATTGAAGTTTGTCGGCACTCTCTCTCGCACTTCTCTATATTATTAGAAGGACACGCATGTACCCTAGTAGGATTTTT
ATATATTATTAGAAGGACACGCATGTACCCTAGTAGGACACGCGTGCATACTACCGTGTGTAAAATAAGTGAAGGAAGGC
TCCCGAAGGCCTCCCTAGCAGCCACCC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr1D_1566
ATATTGATAGAAATTTCAAGAATAGATATTTTAAATATTGATAA------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------TATACC-CGACCCGAATATTGATAGAAATTC
CAAGAATAG----------------------------------------------------------ATATTTTAAATAT
TGATAAGATATTATCAATCATATGGGCAGGGAAGACCCC-TGTAAAAAAA-CAATGTTGAAGATTTAAGCAGCCTTGGCA
TGTATGTACGCATACACTACCAAGGATTCTTGAAGGCAGAAGAA-CTCTGAAGGCTAATCGCATGAAGATCTATATGGCC
GAAGAGCAAAGACTGGTACACAGAGGCCAGTCAATTATTCACCGAGAGACAATGCCACGTGAAGAAAGCATAATTTCTTG
AAGATTGAAGTTTGTCGGCACTCTCTCTCGCACTTTTCTATATTATTAGAAGGACACACTTGTACCCTAGTAGGACTTTT
CTATATTATTAGAAGGACACGCATGTACCCTAGTAGGACACACGTGCATAGTACCGTGTGTAAAATAAGTGAAGGAAGGA
TCCCGAAGGCCTCCCTAGCAGCCATCCC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
S-----S----S-------------------S------------------------------------------------
-----------------------------------------S-----------------------S--------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
---S----------------------------------------S-----------------------------------
---------S--S--S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------------------------S---------------------------------------------
------------------S-------------------------------------------------------------
------S---S--------S-----------------------S------------------------------------
----------------------------------------S--------------------S------------------
-------------------------------------S---------------------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------S---S-------------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
------S-------------------S-----------------------S-------S---------------------
S-----------------------------------------------------------------------------S-
------S---S----------------------S----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------------S--------------S---
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_995
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------TTGATGGAAATAAACCTGGCATAC---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_2262
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------TTTGTCCCGGTTCTAGGCAC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
