>input_sequence_78667
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-----------------ATGAAGGCCAAGAAGTTGAGGGTGGCCGCCATGGCCGCG------CTGTGCGTGCACCTGCTC
CTCGTGGAGCAGCAGCAGGTGGCTGCCATGTCCGAGTTCTGCCACTGCTACGGAGACTGCTAC-----------------
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-----------------------------------------------------------------------------TCC
GAGTGCAGGCAGGACGCACCGCGCTGCCTCTGCCTCCCATCCTGCGTCAACTACTGCAGCTCCAGCCCCGGCACCAGCCA
GGCCATTGTAGGCGACTACGGCGGCGCCACATGCAGGATGACCTGCAAGCTGGACCTGAGCGTCTGTGGCTGGTCGGTGG
AGCCAGGCGGTAAGACGGCAT------------CACATTCCTTTTCCATCTTTTGAATTGACGAATTAAATC---TGTGT
TTCCTATTCTTTTGAGAAGGATTGTTTCTTCTA--CTGTTCTGATCATTTCTGTTCTTGCATTGCAAATTTTGCAGATGC
AGCTGACACCGCAATCTGTGTGCAAAACTGCAACAGGAAATGGGGCCACAAGGCCAATTGA-------------------
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>chr7D_1_TraesCS7D01G459900
GCTTTTTTTTAAGAAGCCTCAAGCGATCAACGATTTTCTTTTTTGCCTGAAAAACAGAGCAAGCATTGTCAAGGCTTTGC
ATAGATAAATCTGATACGGAAGAATGACCTAAACATGACACAAAAAACTTTCCACCATCGGCTATGCCTAGATTCTCGCA
GGATGCCGTGGGACGTATACAACTGCACAAATCAGACACAGTAGTATGGCGGTTTCGCAGATTCAGGTGTTGGGTGTGGC
TGGAGCTGAGCTTCTGCACACTCTGAATCATCCTACTCTCAAGTCTTAACATCACTGAAAAAGCACAAGTCTCAACCAAG
TTGGGCACACGTATTAATCACCTTGTGCCAATATTTGACAAGCAAAGGACACGAATACCGAATCTAGGATAATTTATCCC
TGAATTAAATCGAACTGGAGTGCAAACTCGAGCAGTAAGTTGCTCATAAGACTACCCACAGTGGGAGTAACATAGGTAGT
AACATCA------------CACATATCTAGATAAAATAGATGATGTGGCAA-----------------------------
------------------------GCAATAAATGAAGAAAGCTTGCCTTCACAAATTT----------------------
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--------CCATCAGAGAGCTTGCCTTCACAAATTTCCTTTCTACAGCTCTCTGCTGCTCGGGCATAAACTAGTTACCTG
CTGCCAAGTCAAGGAAATCTGATTTCTCCCAGCTTAGCTGTAGTGTTTTAAAGCTAAACACATACTAGTATTAGAATTTG
AACCTTCAGTGGTATATAAACAGCAGTGTATCTGAACTGCATTCTGTCTTCTTTCTACATCAATACAGG------CAGCT
CCATCAG-------------------------------------------------------------------------
------------ATAACCCGGCGGCGATGCTAAGGAAAATCATGCCCATTTCATTTACCGGGAAATACACTACAATGGTC
AAATCTCAAATGTCAGTTTTGTCCTCGGAGCTCCGGTGCCCA--------CATAAGAACCCACACAGCCTCACGCTCTCG
CCACAACAGTTCTCTCCTCTGCCTCCCTTGTTCC-----------------------CCGAGAAGGAGAAGAGGCCACAG
CTTGCTCGAGGAAGGAGATGAAGGCCAAGAAGTTGAGGGTGGCCGCCATGGCCGCG------CTGTGCGTGCACCTGCTC
CTCGTGGAGCAGCAGCAGGTGGCTGCCATGTCCGAGTTCTGCCACTGCTACGGAGACTGCTAC-----------------
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-----------------------------------------------------------------------------TCC
GAGTGCAGGCAGGACGCACCGCGCTGCCTCTGCCTCCCATCCTGCGTCAACTACTGCAGCTCCAGCCCCGGCACCAGCCA
GGCCATTGTAGGCGACTACGGCGGCGCCACATGCAGGATGACCTGCAAGCTGGACCTGAGCGTCTGTGGCTGGTCGGTGG
AGCCAGGCGGTAAGACGGCAT------------CACATTCCTTTTCCATCTTTTGAATTGACGAATTAAATC---TGTGT
TTCCTATTCTTTTGAGAAGGATTGTTTCTTCTA--CTGTTCTGATCATTTCTGTTCTTGCATTGCAAATTTTGCAGATGC
AGCTGACACCGCAATCTGTGTGCAAAACTGCAACAGGAAATGGGGCCACAAGGCCAATTGACTTCCAAGAGCTGGCTGCT
CCGCTTTTAGAGAAGAGAAAAGAAATTGAAGAGCTAGCTTCTCGATCATGGGATCGTATATAAATGATGTTCAACGGCTG
TGATTGTA----GCAGCAAGCAATAACATGAGTTTCCGTTGCTGCCATCTATACATAATTATGTTTAATCTGACTTTGAT
TTGGCCTACCCGTGACTCAATCATAAGAACCAAATTTGTCCGTCTTTTTTGTTCCCACAGAAAGTAAGGAAGAAAATATT
TCTTAAGCTAACTCATAGTGAAGAG---TTAAACTTCAAATGTTCACCAACTCATCGT---AACCTAGGAGAAAGGAGAA
AA-ATTAACATGACTCAGAAGCAAAGTAGCATCGCTACTGAATTTTAAAACGAACAGCAGTTATGGATGTGTAGAGGCAA
ATCAAGGCTAATAAGGATTTGCCTTCGGTTTGCCGATCCCTGTCC--TCATAAGAATAACTAAATAATTCGCTCAGAAGC
AAGTCAGGCTTTTGAGTTTTTGCTAGGAACAAGCGAGTCATTTTATTTCTTCAGGAGCAATTTTGCAAACATATCTATAT
ATATCTGTGGGATAAATATAGATATGTTGAAACCTCTAATTTTTTGTATACTTGAAAATACCGGCTCCCATGGAGGTTGG
GAGCCAATTGACAATTTCCAAATAAAATGGACATATTGACAAGGATAATGTGGAATGGTGCTCGGATTCTCTGTTTTCAA
GAAAATATGTTTTTTTTCGTCCAAAATAAAATAAAATATTGGCACATGTAGATTACTTATATTGTGTTCAATTTTTTTGT
TAAACTCATTAGATCATCGTTGGCTGTGGATACAAGATTCTCACAGATATCTAGTTGCTACTACCTCCATTCCAAATTAA
TAAAAGGTATAGTTTTGTCCTAAGTCAAACTAATTTGTTCCTAATCACTTGCAGTTTCTTGTAGTAGATGCATGATGGCA
AGAGTAATTTATGAAGAATGATGTTCTAGCTGCA
>chr7A_344
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-----------------------TGTGCCAATATTTGACAAGCAGAGGACACGCATATCGAAACTAGGACAGTTTAGCCC
TGAATTAAATCAAACACAAGTGCAAACTCGAGCAGTAAGTTGCTCATTACATACATATAATGGGCATAAGTTTTCAGTTT
TAGGTGATGTAGTAAGTTGCTCAAACAGAGACTAAATACATGGAGTGAAGCATTAACTCTTATGGTTACCCTTGATATGC
CCCGTGCAGACTTGAGAAGCTCGGGCAACACCATAGGACAGCTTGCCACCAGATGCTTATATCCGTCTGTCGCCAACACA
GCATCAAGAATTGCAGGAGTGCTAACGATGAACTCAACGCACTTCACCATGAGCTGCGGGTAGTTGTGTTGCTCTGCTAA
GGCCAGAGCCATCAGAGAGCTTGCCTTTGCAAATTTCCTTTCTACAGCTCTCTGCTGCTCTTGCATAAACTGTTTATCTG
TTTCCATGTCAAGGAAACTTGATTTCTCCCAGCTTAGCTCTAGTGCTGTACAGCTGAAGACATACTAGTATTAGAATTTG
AACCTTCAGTGGTATATAAACAGCAGTGTACCTGAACTGCATTCTGTTTTCTTTCTACATCAATACAGGTACAGGCAGCT
CCAACAAGGCTTTCTCTACTCACTTTTGAGGTCCAACGTTATGCTACAGGACACTCCACCTGCACATCATCCATTCGCCG
AAAAGACGCCAGATAACCCGGCGGCGATGCTAGGGAAAATCGTGCCCATTTCATTTACCGGGAAATACATTACGAGGG--
-----TCAAATGTCGGTTTTGTCCTCGGAGCTCGGGTGCCCA--------TATAAGAAAGCACACCGCCTCACACTCTCA
CCACAACAGTTCTCTCCTCTGCCTCCCTTGATCAAATATATTCTTGATGCTGTGTTACCGAGAAGAAGAAGAGGCCACAG
GTTGCTCGAGGGAGAAGATGAAGGCGAAGAAGTTAAGGGTGGCCACCATGGCCGCGCTGTGCCTGTGCGTGCTCCTGCTC
CTCGAGGAGCGCCAGCAGGTGGCTGCCATGTCCGAGTACTGCAAGTGCTACAGAGAGTGCTAC-----------------
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-----------------------------------------------------------------------------TCC
GAGTGCAGGCATGACGCGCCGC----------------------------------------------------------
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>chr7A_554
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--------CCATCAGAGAGCTTGCCTTCGCAAATTTCCATTCTACAGCTCTGTGCTGCTCTGGCATAAACTGTTTATCTG
CTGCCATGTCAAGGAAACCTGATTTATCCCAGCATAGCTGTAGTGCTGTACAGCTAAAGACATACTAGTATTAGAATTTG
AACCTTTAGTGGTATATAAACAGCAGTGTGTCTGAACTGCATTCTGTTTTCTTTCTACATCAATACAGG------CAGCT
CCATCAGTGCTTGTCTACTCATGTTTTCAGGAACAAGGTTATGCTACAGGACACTCCACCTGCCCATCATCCATTCGACG
AAAACACGCCAGATAACCTGGCGGCGATGCTAAGGTAAATCATGCCTATTTCATTTACCGGGAAATACATTACAAAGG--
-----TCAAATGTCGGTTTTGTCCTCGGAGCTCTGGTGCCCAACTGCCCATATAAGAACCCACACAGCCTCACACTCTCA
GCAC-ACAGTTATCTCCTCTGCCTCCCTTGATCC--------------------------AGGAGAAGAAGAGGCCACAG
CTTGCTCGAGGAAGGAGATGAAGGCCAAGAAGTTGAGGGTGGCCGCCATGGCCGCA------CTGTGCGCGCTCCTGCTC
CTCGTGGAGCAGCAGTAGGTGGCAGCCATGTCCGAGTTCTGCCACTGCTATAGAGACGGAAAAAGTTCAAAATAAACCTT
GAAGTTGTAGACGAAAGTTAAATCAAACCCTAAACTTTGAATCCCAGAAATTGGCACTCTGAACTTGCAATCCCGGTCTA
TTTTGGACCCTAGACCTGTTTGGCAAACTGAGAATAGTATAATCCCGGCCGGGATAACCAGCTACTCTCACGGACAAGAA
TCCGGGCCGGCCCACTATAACACAACAAGAATTCGTGAAGTTTAAAAAATGTTCACACATTTCTAAAATTGTTCAGAAGT
TAAAAAATGTTCCTGGTTTCTATTGTTGGCGCAAATTCAATTCATTTTGTGTTCTTCAGAAAATGGGTGGAATTTTAAAA
TTCTATTCACAGGTAAAAAAACTGTTCGTGATTTCAAGAAAATCACATTTGTCAAAAATGTTCAGAATACCAACAGTTTT
TCAGATACTATGATTTTTTTCAGATTTTCAAAATTGTGTTACATTTTTAAAATATGTTTTTGGAATTTCATAAGTAATGT
TTTTAAAAATTGTTTTTAGATTGTTGGTTGCGGAATCGACTGGGTCGGCCCACCAGACATGTAGCAAGTTTTTTTTCACA
CGAGACGTAAAAATTCCTTCTTTGTTTTTCTTAATGCGTGACGTAATAATTCCAAAACAAAAAACATGCCGTGGAGTCAA
ACTTAGGACCTGGCATGGTTGACCTGATTTCACTAGCCACTACACCAGACGACTGGCCGAAATTATTTAAGCAGAAACCA
ACAACTTTGAAAAAGTGAACACCTTTTGAAACATAAACATTTTTTGAAACCTCAACAAAAATATAAGTGCAAACACTTCC
GAGTGCAGGCAGGACGCGCCGCGCTGGCTCTGCATCCCATCCTGCGTCAACTACTGCAGCTCCAGCCTTGGCACTGGCCA
GGCCGCTCTCGGTGACGACGACGGCGACACATGCAGGATGGCCTGCAAGCTGAGCCTGAGCGTCTGTGGCTGGACGACGG
GGCCAGAAGGTAAGACGGCAGGACCATATTGACCACATTCCTTTTTCATCTTTTGAATTGACGAATTTGAATCTGTGTGT
TTCTTTTTCTTTTGACAAGGATCGTTTCTTCTCTTCTGTTCTGACCATTTCTGTTCTTGCATTGCAT-TTTTACAGATGC
AGCTGACGCCGCGATCTGTGTGCAAAACTGCAACAGGAAATGGAGCCACAAGGCCAGTTGACTTCCAAGAA----CTGCT
CCATTCTAGGAGAAGAGAAAAGAA------------------------TGGGATTGTATATAATCGATGTTCAACGGCTG
TGATTGTACGTAGCAGCAACCAATAAAATGAGTTTCTCTTGCTGCCATCTATACATAATTTATTTAACTCTGGCTTTGGT
TTGGCCTACCCATGACTCGATCGTGACAACCAAATTTGTTTGTCTTTTTTGCG---ACAGAAAGTGAGGG-GAAAATATT
TCTTAAACTAACTCATAGTGTAGAATAATTAAACTTCAAATGTTCGCCAAGTCATCAACAAAACCTTAGAGAAAGGAGAA
AAGATTAACATGTCCCAGAAGCAAAGTAACATTACTTCTGAAACTAAATATGAAAGGGAGTTATGGATTTCTAGAGGCAA
ATCAATGTTAAAAGGGAATTTCGTTTGGTTTGCCTATCCCTGCCATATCATAGGAATAACCAAATAA-------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---------------------S--------S---S----S------S-S----S---
-----------S---SSS-----------------------------S-S-SSSSSSSS-SS--S-SS-SSS-SSSSSS-
S-SS-S--------------S--S-SSS---SS-----S---SS---SSSS-----------------------------
----------------------------S-SSSS-S--S--------SS--S-SSS------------------------
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----------------------------S-------------------------------S----------SS---S---
------S----------S---------------------------S-S--S-------S---------------------
-----------------------------------------------S--------------------------------
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---------------------------------------------------------------------S-----S--SS
SSSSS---------S------------------S----------------S----------------------S-----S
------------------------------S----------------------------------S--------------
------------------------------------------------------------------------S-------
---------------------------------------------------S----------------------------
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-----------------S--------S------S---------------------------------SS-----SS----
----SS-S-S--S---S---S-----S-------------S-----------SS-------------------S--SS--
S-----SS------------S------------------------S---------------------SS-SS--------
---S-S---------S------S---------S-----------S---------------------SS----S-------
-------S----S------------------------------S------------S-------------SSSSS-----
--SS-S-SS---------------SSSSSSSSSSSSSSSSSSSSSSSS------S--------SS---------------
-------------------S------S---------SS----------------------SSS--S-S----S-----S-
-----------S------S---S-S-S------------SS----------SSSSS---------S---SS---------
------S-------------S---S--------------------S----S-----SS--------SS------------
------------S-S-------------S---SS--S-----SS-S--S-S---SS-S----------S-S---------
-----S-S---S-S---S--S-S--S--------S-------S-S-------S-------S------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_333
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-------------------------------------------------------------------------AACCAAG
TTGGGCACACGTA-------------------------------------------------------------------
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>reverse_3269
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--------------------------------------------------------------------CATGGAGGTTGG
GAGCCAAT------------------------------------------------------------------------
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