>input_sequence_78613
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--------------------------ATGTGCAGATCTTCCACTCAAGCTTACCCTTGCTTTGCTGTGCACAGTCCACAC
CACAAAGCAATGGCTCCGGGTTCATCCGCTCTCGCTCTCAAGGCAGCCGCCATCGCCGCCATCCTCGCCATTCTGGTCGT
GCCTTCTCTGGGGCGCTGCGGTCACTCTCAAGTGCCAGCAACGCCACCGCCTCCGGCTCTTCCACCATCACCACCATCGC
CACCTCCGGCACCGGCGTCGGAAACGATGCTCTGCAAAGACTGTGCAGCCTCCGTCGCCTCGATCTGCAGCTCTTCGTGC
AACGGCGTTGCCGGTGTCTGCGGCATCTGCAGTCGCGAGGACTGCAGCGGTGCATGCAACAACG---AAGCGGGCAGCAA
CTGCACCGGCAATCCATGCACCGGCAGCTGTGAGGTGTGCAACTATGCAGCTCGAAGCTGCGACGCCTGTCGTGGCGCGA
ACGAGAGGAACTGCTTCGGTACCTGCAGCGATGAGTGA------------------------------------------
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>chr7A_1_TraesCS7A01G134900
GAATATTTTTCACATACAAGTTAAATAAGTTCAATTTGTTCACCAAAAGACAGATGCAAAGATAGAAGGGCCCCAGTTAT
GGAATATGGAAGACATAGAGGGACCCAGTTTCATAGCAGCCG-GA-AAATGTTGGGGCAGATGATTATCTTCCTTTAAGC
AAATTCTACAAATTTATATTTCACTTGCTGCTTTGAAATCACATCATGCATCTTGGTGAGTAACTTT-AGTGATTTGATT
T-GCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGTAGTGG-A--TT-----------------------
-------------------TTTTTTCTTGGGAAGCAAAGGTAGTA-ATTTTGATCCAAACACAATAATAATTTTATTTCT
CAATTGCTTGTGCAATATAT--GAAAATGGTTTCTATTTGATTGATAATATGGTAAAAACTTTATAAGTCAATGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATCGTATTATTTTTTGTTTTCAAGGATCAACATTGCATGCCAGTAGTTTCACACAAAAGGAAAGGTG------------
---------------------------------A---------------------------------------------C
CAAACAAACTCTCAAATTTATTTTATAGTATCCATTGCAACACAAGGGACTTTTTTGCAAGCACAATTTTCATGAACAAC
ATA--TGTGTTTTGCACATAATTGAATACACATCAACTTTTCTCCCGTTGCAACACCCGGGCATTTGTGCTAGTATGTTC
AAAAAAATATATATGTTCAATATCCTCCAGA-ACAAGGCAGCCCTCGAGACTCAAGATACTCTCAAGAGTAATTCAGTTT
GCTC-TAGTCTCCTCCAGAGAGATCCAACCGACATTGCCCGGTCAAGGTGAATATGATTTGAAGTCAACCTGCCATGCAT
GGCGCAGATCTCAACTCCCAACTTGGTGCTCTTGACCTATACACAAATAGTTTAGAC-----TACATGACAGGACAAGTT
ATAATAGCCATACCAAAGATTTCG--------------------------------------------------------
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---------------TATCTTGAGCGCCTATAAA------TACCATCGTATGTGCATATC-------AAGCCATCACATG
TCATTCCGTGTCTCCCTCTCTTGCTGATGTGCAGATCTTCCACTCAAGCTTACCCTTGCTTTGCTGTGCACAGTCCACAC
CACAAAGCAATGGCTCCGGGTTCATCCGCTCTCGCTCTCAAGGCAGCCGCCATCGCCGCCATCCTCGCCATTCTGGTCGT
GCCTTCTCTGGGGCGCTGCGGTCACTCTCAAGTGCCAGCAACGCCACCGCCTCCGGCTCTTCCACCATCACCACCATCGC
CACCTCCGGCACCGGCGTCGGAAACGATGCTCTGCAAAGACTGTGCAGCCTCCGTCGCCTCGATCTGCAGCTCTTCGTGC
AACGGCGTTGCCGGTGTCTGCGGCATCTGCAGTCGCGAGGACTGCAGCGGTGCATGCAACAACG---AAGCGGGCAGCAA
CTGCACCGGCAATCCATGCACCGGCAGCTGTGAGGTGTGCAACTATGCAGCTCGAAGCTGCGACGCCTGTCGTGGCGCGA
ACGAGAGGAACTGCTTCGGTACCTGCAGCGATGAGTGATCCGCGCCCACATGCGTACCCTGGAG----------------
--------CCCTGAGAACCAGCTAGCACGTGTTGCATGCATCTATATA----TGCAGTGTGCATGACATGAGATGCTGTG
ACAACGAATAAAATATACAGTACT---TTACAAATGTAACGCGTGCTTCCCTTTTATTTATTTTATTTTAATCAAGAATA
AATTTCACTTTTATTCGGGCATCCGTTGTATACTCCTAC---CTTCCTTTTCCTTTTCTTGGTCCGTGTACTTGCTGCGG
CGGTAGGCCAATGCGTTTGCGTTG--------------------------------------------------------
--------------------------------------------------------------------------------
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-----TTGATTGGCAAGAGG------------------------------------------------------------
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AGCACTTGTTAATC----------------------------CAGGGATAAATGACAATTGCCAAAGAGGGAAATCTTGC
AAGTATATACA-----ATAGGAACACGCCTTGCATTCATTTCATTTTCTGATTATTCAAGGAAACAATGCACCTC-----
-------CATGTAAAATGTTGGTACATAAGGACATCTCTAGCAGATACCATATTTGAGGTGAAAAAATTCGGTTCAAATG
ATTAAGGACATCT--AGCAGATCCCTTATATGACCTTTTCACCCTTCAAAAATAACCTTTTCTTGCAAAACCTCCCCATT
CATTCACATTTAGTTTAG-CGGGGGTATTATTATGAAAAGCCGCGCCCCGTCCACAACCCAACCTCGTCAACTGGGCTGT
GCTTGGCAGACCGGCCAGTTAGCACATGTA-CCCGGCCCATGATGGGCCGGCCCCACGTGTGGTTAACGGGGTCGTGCCC
CGCACGTGGCCTGCCTATGGCCTTGCCCGGGCCTGGAGGCTGGGCACACGTACCGGTACTGGCACGACAAGATCCATTTA
GTTTTTTCTTTTAGGCCAATAGGCAGCTCAATAGCTTGAATAATAGGTGGGCTGACGGCTAAACGTGCCAATGGCCCAGC
CCCTTTAATAGTATTTTTTGAGCGGTAGCCTGTTTAATAGTAGTGTTGTGGGAAGCAACTAATCAAGGGACGCATCCCTC
AAAAAAAAAAAAAAAAACTAATCAAGGGACGCTCCTCCAGAA
>chr2B_1
GAATACATTCCACATACAGGTTACATAAGTTCAATTTGTTCACCAAGAGACAAAGGCAAACATAGAAGGGCCCCAGTTAT
GGAATATGGAAGACATAGAAGAACCCAGTTTCATAGCAGCCG-AA-AAATGTTGGGGCAGACGGTTATCTTCCGTTAAGC
AAGTTCTACAAATTTATATTTCATTTGCTACTTTCAAATCGCATCGTGCATCTTGGTGAGTAACTTT-AGTGACTTGTTT
T-GCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGTAGTGG-A---T-----------------------
-------------------TTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAACACAATAATAATTTTCTTTCT
CAATTTCTTGTGCAATATAT--GAAAGTGGTTTCTATTTGACTGATAATATGGTGAAAACTTTATAGGTTAATGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATCGTATTATTGTTTCTTTTCAAGGATCAAGATTGCATGTCAGTAGTTTCACACCAAAGGAAAGGTG------------
---------------------------------G---------------------------------------------C
AAAACAAACTCTTAAATTTATATTATAGTATCCATTGCAACACAAAGGACTTTTTTGCACACACAATTTTGATGAATAAC
GGATGTGTGTTTTGCACATAATTGAATACACATCAACTTTTATCCTGTTGCAATGCACGGGCATTTGTGCTAGTATGTCC
CAAA----------------------------------------------------------------------------
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>chrUn_1
GAATATATTCCACATACAGGTTAAATAAGTTCAATTTTTTCATCAGGAGACAGATGCAAAGATAGAAGGG-CCCAGTTGT
GGAATATGGAAGACATAGAAGGACCCAGTTTCATAGCAGCCG-AA-AAATGTTGGGGCAGCTGATTATCTTCCATTAAGC
AAGTTCTACAAATTTATATTACATTTTCTGCATTGAAATCACATCGTGCATCTTGGTGAGTAACTTT-AGTGATTTGGTT
T-GCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGTAGTCGAA--TT-----------------------
-------------------TTTTTTCTTTGGAAGCGAAGGTAGTAGATTTTGATCCAAACACAATAATAATTTTCTTTGT
AAATTGCTTGTGCAATATAT--GAAAGTGGTTTGTATTTGATTGATAATATAGTG-AAACTTTATAGGTCAATGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AGATATA
AATC--ATTATTTTTTGTTTTCAAGCATCAACATTGCATGCCAGTAGTTTCACACCAAAAGAAAGGTG------------
---------------------------------A---------------------------------------------C
CAAACAAACTCTCAGATTTACTTTATAATATCCATTGCAACACAAGGAACTTTTTTGCACGCAGAATTTTCA--------
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>chr4A_2
-AATATTTTCCACATACAAGTTAAATAAGTTCAATTTGTTTACCAAGAGACAGATGCAAAGATAGAAGGGTCCCAGTTAT
GAAATATGGAAGACATAGAAGGACCCAGTTTCATAGCAGACG-AA-AAATGTTGGGGCAGACGATTATCTTCCTTTAAGC
AAATTCTACAAATTTATATTTCACTTGCTGCTTTGTAATCAGATCATGCATCTTGGTGAGTAACTTT-AGTGATTTGATT
T-GCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGTAGTGG-AATTT-----------------------
-------------------TTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAACACAATAATAATTTTATTTCT
CAATTGCTTGTGCAATATAT--GAAAATGGTTTCTATTTGATTGATAATATGGTGAAAACTTTATAAGTCAATGTCACAT
GTAATCGTTCAAGAGAACTCCGGAGCGGCGGAGAATGGCGAGCGACCCGTTCCCAACTCAGCCCCTCCCGGCGCCGGCCG
CCGCGGCCACGCCGGCCACCACCCCCCTGCGCCTTCTGCTGCTGCCGCCCCCACCGGCTTGCCTGCCACCGGACTTCACC
CTGCAGGTGGTTCCTCTTCCTTCAGGCGCTGCGTCCCTGCCGGCGCAGTTGGGCGCCAGATCCAGTTCGCCGGTCCGGCG
GTCGCCGCCTCCCGAAGGCCTGGGCTCGGTGCTTGCGCTGGAGGAATTGGTGCCGGAGACGCCGCTTGAGCCCCAGGGCG
CCCAGCCGCAGATCGCATGCATCGTTGTCGTCCCGTCGCCTCGCAGCCATGGCGCCTCCTCCTCCTCCCGCAACGGCTCT
TCAGCGGATGCAGGGCGTGATGTAGAGAAGACCAGCGAGGGATGGAAGCTCGTATCCTACCGGCGTGGCCCGTGCCCCCC
GCCCCCTCCTACTCAGGCCACCCCTCGACGACCTCGATTGAAGCATATTAATGGTTGGGTCACCGAGCATGAGAGGAAGG
AGGGAATCATTCTTGACCACTTCTCTAGCGTCATCAGAAAGACAAATGCTAGAAAAAAAGACTTCAATTGGGATCACTTT
CATTTTGAGGATTGCGACCTTGGCAATCTTGATGATCCCTTCACACTGGAGGAAGTCCACAATGTCATCAAGCAAATGCC
CAATGACAAGGCCCCCGGACCGGATGGGTTCACCGGATTGTTTTTCAAGTCATGTTGGGGCATTATTAAAGAGGATGTTA
TGCGGGTGATCCACCAATTTGGTAACCTCCATGTGGCCAATCTACATTGGCTTAACTCAGCGAACATTGTGCTCTTGCCA
AAGAAAGATGGGGCGGAGGGAATTGGTGACTACAGACCTATTAGCCTAATCCATGCCATAGCCAAGATCATTGCCAAGTT
GCTTGCGGTCCGTCTTGGGCCTCATATGGACAAGCTTATCTCCAAGGCTCAAAGCGCTTTCATCAAGAAGAGAAGTATTC
ATGATAACTTCATGTATGTGCGTAATCTTGCTCGCTGGCTCCACAAAAGCAAAACTCCATCCATCCTTCTCAAGCTTGAC
ATTCGGAAGGCTTTTGACTCCGTATGTTGGGATTACATTCTTGATCTCCTCCAACGAAGAGGCTTTCCTAGCAAATTTCG
TGAGTGGATTGCGGCCCTCCTTTGCACATCCACTTCCCGGATTCTACTCAATGGTGTTCCCGGCCCACCTATTAAGCATG
GCCAGGGCCTTCGCCAAGGAGACCTGTTCTCGCCTCTATTGTTCGTCATCGCCATTGACCCTCTCCAATAAGTGTTGGAT
TTGGCCACTGCTCATGGCTTACTCCATAAGATCAGAGGTCGTGGGGCTGTTTGTAGGACCTCACTCTATGCTGATGATGC
AATGGTATTCATGGCCCCCATCAAACAAGATATGGACAACCTGTTGTCCATCTTGCACTGCTTTGGTGACGTCACCGGTC
TAGAGACAAACTTACAAAAGAGCTCCTATGTCCCCATCCGGTGTAGCAACCGCAACCTAGGAGAGATCCTCCATAACTTG
CCGGCGACCCGAGCTCACTTTCCCATCCGTTACTTGCGCCTACCCCTATCCATATGGCAACTCAAGAGAGCAGATTTTTA
ATTCCTTGAAGATAAGGTTGCCGCAAGGCTGGTACCTTGGGATGGGCAGAACGTCACCACTACGGGTCGTGGTAGCCTTG
TCAAGTCGGTGCTCACCTCGCAAGTCATCTACCATGCCACTCCACTTATCATCCCACCACCCATAATAAAGAGCATCAAC
AAAATCGAGAGGGCTTTCCTTTGGGCGGGAACAGACAAAATCACCGGCGCAAAGTGCAAGGTTAATTGGGCTACTGCGTG
TCGACCAAAGCATCTTGGTGGATTTGGTGTGCTCGACCTTGACAAGTTTGCTCGGGCCTTGCGTTTGCGTTGGCTTTGGT
ATGAGTGGAAAGACCCTGGCAAGCTTTGGGTGGGTATGGGGAATCCATGCAACAAGGTGGACATCAACCTATTCTACGCC
TCTACCATCATCTCAATTGGCAATGGTGCCATTGCCCCCTTTTGGGGTTCCCCTTGGCTCAATGGAAAGAAACCGAAGGA
CATTGCTCCTCTCATTTACTTGGCCTCCTCGCGAAAAAAATGGAAAGTCAAGGAGGCCTTGGTGGATGATGCTTGGATTC
GCAAGATAAACCTCAATATGATTCTGACCATGGAGCACCTTAGGCAATTTCTCACACTTTGGGAGCAAATTCGCCACACC
CACCTACGCGAGGATGCCATCGACGAGATGGTTCGGAAGCACTCAACAAGTGGTTTTTATTCGTCGGCATCGGCTTATCA
CGCACAATTCATTGGATCTATGGGCACCACCTTCCACTGCTACATTTGGGGAGCTTGGGCTCCGCCGAAGGTGAAATTCT
TTGCTTGGCTTGCAACCCGTAATAGGATTTGAACGGCTGACAGACTCGTTAGGAGGGGTTGGCAAAATTGTGGACTGTGT
CCGCTTTGCCAGCATGTGCAAGAAAATGGAGCCCATCTTTTCTATAAGTGTCGCTTCACCTTTAGGATTTGGAACCTCAT
CAAAAATTGGCTTGGTCTCCACATGACTGACATGGCAAATTGGGACAATTTGCACTCTCTCTCGCTTTGGTGGAGAAACA
TGCCTGGAAGCAACATCCCCAATAGAAAGGTCATGGCATCCCTCACTATGCTAGTTGGGTGGACCATTTGGAATGAGAGA
AACGCTCGTATATTCAGGCACAAGTCAACACCTACGCCGGTCATCTTTGACACCATCAAAAGAGAAGCTAGACTTTGGGT
TACTGCGGGTGCACACAAATTGGGTAACATAATGCCGGGAGAGTAATGGACCTCATGTAATATGTGCGGCGTAACAAACA
AACTCTATTCTCCTTCTTAATTAATGGATGAGGCAAAGCTTATGCCTCCGTTTTGAAAAAAAATGTCACATGTAAATATA
AATCATATTATTTTTTGTTTTTAAGGATCAACATTGCATGACAGTAGTTTCACACCAAAGGAAAGGTG------------
---------------------------------A---------------------------------------------C
CAAACAAACTCTCAAATTTATTTTATAGTATCCATCGCAACACAAGGGACTTTTTTGCAAGCACAATTTTCATGAACAAC
AGA--TGTGTTTTGCACATAATTGAATACACATCAATTTTTCTCTCGTTGCAACGCACGGGTATTTGTGCTAGTA-----
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>chr6A_3
--ATATTTTCCACATACAAGTTAAATAAGTTCAATTTGTTCATCAAGAGACATATGCAAAGATAGAAGGGCCCCAGTTAT
GGAATATGGAAGTAATAGAAGGACCCAGTTTCATAGCAGCCG-GA-AAATGTTGGGGCAGACGATTATCTTCCTTTAAGC
AAATTCTACAAATTTATATTTCACTTGCTGCTTTGAAATCATATCATGCATCTTGGTGAGTAACTTT-AGTGATTTGATT
T-GCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGTAGTGG-A--AT-----------------------
-------------------TTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAACACAATAATAATTTTATTTCT
CAATTGCTTGTGCAATATAT--GAAAATGGTTTCTATTTGATTGATAATATGGTGAAAACTTTATAAGTCAATGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATCGTATTATTTTT-GTTTTCAAGGATCAGCATTGCATGTCAGTAGTTTCACACCAAAGAAAAGGTG------------
---------------------------------A---------------------------------------------C
CAAACAAACTCTCAAATTTATTTTATAGTATCCATTGCAATACAAGGGACTTTTTTGCAAGCACAATTTTCATGAACAAC
AGA--TGTGTTTTGCACATAATTAAATACACATCAACTTTTCTTCCGTTGCAACACATGGGCATTTGTGCTAGT------
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>chr4A_25
------------------------ATAAGTTCAATTTGTTCACCAAAAGACAGATACACAGCTAGAACGG-TCCTGTTAT
GAAATATGCAAGACATAGAAGGACCTAATTTCATAGCAGCCGAAA-AAGTGTTGGGGCATCCGATTATCTTCCATTAAGC
AAGTTCTACAAATTTAAATTTCATTTGCTGCTTTGAAATTGCATTGTGTATCTTGGTGAGTAACTTT-AGTGATTTGGTT
TTGCATAGATTTATACAAAGATTTACTCATATTGAGAATCATGTGCAGTGGT-------------------------AA-
TTATGCATTTAGAAGGAAGTTTTTTCTTGGGGAGCAAAGGGAGTAGATTTTGATCCAAATAAAATAAAATAAAAA-TTCT
CAATTGCTTGTGCAATATAT--GAAAGTGGCTTATATTTGATCGATAATACGGTGAAAACTTTATAGGTCAGTGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATTGTATCATTTTTTGTTATCAAGGATCAATATTGCATGCTAGAAGTTTCACACCAAAATAAAGATGAGGGAGCAAAGG
GAATTGTGCACGACGGCAGGTAAACTATCGAGTA---------------------------------------------C
CAAACAAACTCTCAAACTTATTTTATAATATCCATTGCAACATATGAGA-TTTTTTGCACGCACAATTTTCATGAACAAA
AAA--TGTGTTTTGCACATATTTGAATACACATCAACTTTTCTCCCGTTGCAACGCACGGTCATTTGTGTTAGTATAGCT
CAAAAGATATA---------------------------------------------------------------------
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>chr5A_25
------------------------ATAAGTTCAATTTGTTCACCAAAAGACAGATACACAGCTAGAACAGCCCCTGTTAT
GAAATATGCAAGACATAGAAGGACCCAGTTTCATAGCAGCCG-AACAAATGTTGGGGAATCCGATTATCTTCCATTAAGC
AAGTTCTACAAATTTATATTTCATTTGATGGTTTGAAATTGCATCGTGTATCTTGGTGAGTAACTTT-AGTGATTTGGTT
TTGCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGCAGTAATAATTATGCATTTACCCCGCAAAAAAAA-
TTATGCATTTAGAACGAAGTTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAATACAATAATAATTTTATTTCT
CAATTGCTTGTGCAAAATATATGCAAGTGGCTTATATTGGATCGATAATACGGTGAAAACTTTATAGGTCGGTGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATCGTATCAATTTCTGTTTTCAAGGATCAATATTGCATGCTACAAGTTTCACACCAAACTAAAGGTG------------
---------------------------------AGGGAGCAAAGCGAATTGTGCATGATGGCAGGTAAACTATCGAGTAC
CAAACAAACTCTGAAATTTATTTTATAATATACATTGCAACATATGAGA-TTTTTTGCACGCACAGTTTTCATGAACAAC
ATA--TGTGTTTTGCACATAATTGAATACACATCAACTTTTTTCCCGTTGCAACGCACGGGCATTTGTGCTAGTATATTA
AAAAGCAAAGATATA-----------------------------------------------------------------
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>chr1B_25
------------------------ATAAGTTTAATTTGTTCACCAAAAGACAGATACACAGCTAGAACAGCCCCTGTTAT
GGAATATGCAAGACATAGAAGGACCCAGTTTCATAGCAGCCG-AACAAATGTTGGGGAATCCGATTATCTTCCATTAAGC
AAGTTCTACAAATTTATACTTCATTTGCTGGTTTGAAATTGCATCGTGTATCTTGGTGAGTAACTTT-AGTGATTTGGTT
TTGCATAGATTTATACAAAGATTTGCTCATATTGAGAATCATGTGCAGTAATAATTATGCATTTACCCCGCAAAAAAAAT
TTATGCATTTAGAAGGAAGTTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAATACAATAATAATTTTATTTCT
CAATTGCTTGTGCAAAATATATGCAAGTGGCTTATATTTGATCGATAATACGGTGAAAACTTTATAGGTCGGTGTCACAT
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATCGTATCAATTTCTGTTTTCAAGGATCAATATTGCATGCTACAAGTTTCACACCAAACTAAAGGTG------------
---------------------------------A----------------------------------------------
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>chr5A_27
--------------------------AAGTTCAATGTGTTCACCAAAAGACAGATACACAACTAGAACGGCCCCTGTTAT
GGAATATGCAAGAGATAGAAGGACCCAGTTTCATAGCAGCCG-AAAAAATGTTGGGGCATCCAATTATCTTCCATTAAGA
AAGTTCTACAAATTTATATTTCATTTGCTGCTTTGAAATTGCATCGTGTATCTTGGTGAGTAACTTT-AGTGATTTGGTT
TTGCATAGATTTATGCCAAGATTTGCTCATATTGAGAATCATGTGCAGTGGT-------------------------AA-
TTATGCATTTAGAAGGAAGTTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAATACAATAATAATTTTATTTCT
CAATTTCTTGTGCAATATAT--GAAAGTGGCTTATATTTGATCGATAATACTATGAAAACTTTATAGGTCAGTGTCACAT
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AAACGTATCATTTTCTGTTTTCAAGGATCAATATTGCATGCCAGAAGTTTCACAGCAAACTAAAGGTG------------
---------------------------------A----------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3D_144
--------------------------------------------------------------------------------
-----------------------------------------------------------------TATCTTCCTTTAAGC
AAATTCTACAAGTTTATATTTCATTGGCCGCTTTGAAATCACATCATGCATCTTGGTGAGTAACTTTTAGTGATTTGGTT
T-GCTTATATTTATACAAAGATTTGCACATATTGAGAATCATGTGTAGTGG-AATTT-----------------------
-------------------TTTTTTCTTGGGAAGCAAAGGTAGTAGATTTTGATCCAAACACAATAATAATTCTATTTCT
CAATTGCTTGCGCAATATAT--GAAAATGGTTTCTGTTTGATTGATAATATGGTGAAAACTTTATAAGTCAATGTCACAT
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAATATA
AATTGTATTATTTTTTATTTTCAAGGATCAACATTGCATGCCAGTAGTTTCACACCAAAGGAAAGGTG------------
---------------------------------A---------------------------------------------C
CAAACAAACTCTCAAATTTATTTTATAGTATCCATTGCAACACAAGGGACTTTTTTGCAAGCACAATTTTCATGAACAAC
AGA--TGTGTTTTGCGCATAATTGAATACACATCAACTTTTCTCTCGTTGCAACGCACGGGCATTTGTGCTAGTAT----
--------------------------------------------------------------------------------
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------------------------------------------
>chr7B_659
TATGTT--------------------------------------------------------------------------
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-AAAAAAAACCTATGTTCAATATCCTCCAAACACAAGGCAGCCCTCGAGACTCAAGATACTCTCAAGAGTAATTCTGTTT
TCTC-TCGTCCCATCCACAGAGATCCAACCGACATTGCCCGGTCAAGGTGAATATGATTTCAAGTCAACCTGCCATGTAT
GGCTCAGATCTCAACTCCCAACTTGGTGCACTTGACCTATATAGTACTG---------------CATGACAGGACAAGTT
ATAATAGCCATATCAAAGATTTCGTATCTTGAGGAGAGAGGCATTTTGGAGGCCGAGCTACATGGCTCTCTTTATCTAGT
CCAGTTGTTGTCCCGTTGCGATCTGTGCAGCCTGTCTTTCTTGGTATAATACGCGGACTAGTTTATGGAAATACATCGGT
GCCATGCGTTGGTGTACATGGGCCTTTGATATGTCCGGTCATTTCATTAACATGGCGTGCGTTGATGTGCTGACGGCTGG
CTGCACTGTGTGTCAGAGCAGATGTTTGCTGCGACCGCAGAGAGACCATGCATGCAGCTGCTGGACACTACGAGCGGCTC
TTGCTGTTGGACTATGCGTGTCAGAGGAGATTTATGCTATAGACTAAACAAAATATGGGTTTACTGTGACAGATACCAGA
ACAGACAAAAAAACGTTGCCAACTTGTTGGAAAAATATGATAACAAAATGTGAACTGGACCAGGGAATCCAACAACAAAT
TAGTTGTGCTGGGAAAACTAAAAAATGTTTGACACAATTGGTGAATTGTTTTTTCTATTTTGAAAATGCGCTACACCCTG
CTATCCAAATTAATTGACACAGACTTTATACAACCTCTATACAATCTTGTATAGATGTTGCGTCAATTAATTAAGATCAA
GGGAGTAGCACAACTTGGTACGAGGTAATCTGTGCAAAAACGAGATAGTACAGTAAATTCTCTTTGGCTATGGCATGATC
GAGAGGAGAAAATCGGCAATCAATCGGCATTGTCTCCTAGCACAATAGAAGTGTGTGTGCGCACGCGCGTGTGTCTCAGA
AAATTTAGATACATCAATGAAGAAGATTTTTTTTTTGGTGTAAATTATCAGTCCGGTGAAAATTTTGTTCTGGATGGGGT
AGAGATAAACTAGTTTTGTAATGGTATTGTGTGTGCATTGCCGCTATACGGTTGTGTGATTTATGTACAAAAAAGTTATC
ACTTTGTGTTTGATGATTTAGAAAGCGGTGACTGGTGCGCTTTTTGGTGGCGTGCCGTTGATATTGTGAGCGACACATTT
CCTTCATTGATCGTAATTTTTTTGAGAGACGCGGGACGTGCTTTATAAGGCTTGATTTTTTTTTTAATAAAAACATAAAC
ACAAAATATGAGATACGATATGCCCAATAACACAAAAGATGAGAAAAATCACTTTTGCATGCATTCGGACGGAAAGATGT
TTCTGGAGTGGATTTGCAGTAGTTTGAGATTTTCGGATTGTATTTATTATTGATTGATCATCTAGTCATATGGTTGCTTA
TATCGGGCAAAGAAAATTTGTGATTCAACTCGAATTTGATACATGAGGCTTTTCAGACAATTTTTTCATGGTCATTATAC
CAGCATCATCCCCTCTCATTTTTTTTTTGTTTTTCAAAGCATCATCCCTTGTCGTCTGGTATACTCAAACTAGTAATGGC
AAGTGACAAAAGGCTCCAGTTTCCACAGATCAGATTTAAATGAATAATTATGGGGGTGTAATAATGGTGCATGTCTGTCG
CGTGGTGATGGTTGTATGATGGCACGTGTGCGGGCGCCCGCAAGACCTGACATGGGAAAGCACTGTTGATAAAGGGAGAA
TACAGTGGCCTGTAAGAGCAAGTACAATAGATCTGAGTCAGCTGGCTATAAGAAATAAACTAGCATATTTTTGCTTAGTT
GGAGGAAAGAGAAGAAGAGAGAGAAGGGAAGCGGGCTCTTGGTGAAGAGCCAGCTCTAGCACGTGCTCCTATGCACTTTG
TGAGAGTGAAAGGTGGGTCATATAATAAAAAAGTAGTACACTCTTCTAATCAACTATTGTACATATTGGCTATAAGATGG
GCTATAGATGACATGACAATGGCTTATAGCCAGCAGTTGGCTATACTATTAACCATGCTCTAAATGCTGAAGGATTAAAT
ACGTGAGACTAATACGCGCATGCGCCTGATCTCCATAAAGACTAACGCACAAGATACCGAGCACCATGTAGCTCGGCCAC
CAAACAGCATTTCCGTATCTTGAGTGCCTATAAAATACAGTAGCATCGTATGTGCACATC-------AAGCCATCACATG
TCATTCCGTGTCTCCCTCTCTTGCTGATGTGCAGATCTTCCACTCAAGCTTAGCCTTGCTTTGCTGTGCACAGTCCACAC
CACAACGCAATGGCTCCGGGCTCATCCGCTCTCGCTCTCAAGGCAGCCGCCGTCGCCGCCATCCTCGCCATTCTGGTGGT
GCCTTCTCTGGGGCGCTGCGGTCACTCTCAGGTGCCAGCAACGCCACCGCCTCCGGCTCTTCCACCATCAC---------
CACCTCCGGCACCGGCGTCGGAGACGATACTCTGCAAAGACTGTGCAGCCTCCGTCGCCTCGATCTGCAGCGATTCGTGC
AACGGCGTAGCCGGTGTCTGCGGCATCTGCAGTCGCGAGGACTGCAGCGGTGCATGCAACAACGAAAAAGCGGGCAGCAA
CTGCACCGGCAATCCATGCACTGGCAACTGTGAGGTGTGCAACTATGCAGCTCGAAGCTGCGACGCCTGTCGTGGCGCGA
ACGAGAGGAAGTGCTTCGGTACCTGCAGCGATGAGTGATCCGCGCTCAAATGCGTACCCTTTTTTTTTTGACGCAAATCA
AATGCGTACCCTGAGAACCAGCTAGCACGTGCTGCATGCGTCTATGTA----TGCAGTGTGCATGACATGAGATGCTGTG
ACAACGAATAAAATACTATTACAGTACTTACGAATGTAACGCGCGCTTCCCTC--------TTTTTTTTTATCAAGAATA
AATTTCACTTCTGTTCGGGCATCCGATGTATACTCCTACGACTTTCCTTTTCCTTTTCTTGATCCAT-------------
CGGTAGGCCAATGCGTTTGCTGGAACCAACATTTATTTTTGTTGGACCTAGCAATTTTCTTTTGCTACAATCAACCACTG
AAGTTCTTCTTGCCGGAAATTTATCCACGCGGCATAGGTGCAGACCAACAAGCAGCCGCCTCCTCCTCCTCCAAAAAAGA
AAGTTAGAATTTGTACCTCCCGCCAGCGCCAGCGCAGGTCCGCCTCATCTTTGGTGGCCCTAGGGCATGGAGGCGCGGTG
GATTCTGGCAAGGGCCGGCGGGAGGGCTCCAATTTTACTTTTTTTTTCAATTTTGCTAGGAAGGCAAGACAGCGGCGGCT
CCCTGAATATGGAATAAAGGTCCTCCCGCCTAGCCCCCATTCCGGCGGTGCGTCTAGCATCGTTGGTAGGCGTGTGGAGG
TGTGTCTGCCATAGATCTATCTTTGGTGGATTTGCTCGAATCTCGTCGTTGTTCGTCTACGTTCGTGTGTCTTCGGTTTG
GATCCTTCTGATCTACATTATTTTTCATCGACGGCGGTTGCTGTTCTGGGGTGTTGGTCCTATGGGGCCTTAGCACGACG
ACTTCCCGACTGTCTACTACAACAAGTTGTGCCCGGCTCCGGCGATGGAGGGGCGATGATGGCAGCACGCCTTGGCTCGC
TTCAGTGCTTGTAGTCGTCACTAGGTGATCTACGGATCTGGATGTAATTTTTATTTCTGGTGTTCGTTGTACTGCCATGA
TTGAAAATGAATAGATTGGAAGTTTTCCCGAAAAAAAGTTCTCCTTGGCAAGGTTGATTTTTGCTGGCACCGATGTCCTT
TTTTGTTGGAACCTTATAATGTTTTTGCTTCAACCGAGGATTTGTTGCTTTTTTAGATCTCTTTTGCTAGACATAACTGT
GCAAGTTGACGACTGCGGCAAGCCGGAGGTGGGTTACGATGGGTCATCGGGCACGGCCACAACGGCGACGAGGAGGGGTG
GTGGTGGTGTGCCCGTGAAGAGGGTGACTAGTGCGGGGGAAGAGGATGACACGGGATGGCCAAATCCAACAACTACGCAT
GAATAGATCGGGTGACTGTGCAACGACCGGCCTAAATTTGGGCTAGTCGACCGGCGCCTATCATTGCCCAAAAAAAATGA
AGAACTTGTTAATC----------------------------CATGGATAAATGACAATTGTCAAAGAGGGAAATCTTAC
AAGTATATATGAGTACATACGAACAGGCCTTGCATTCATTTCATTTTCTGATTATTCAAGGAAACAATGCACCTC-----
-------CGTGTATAATGTTGGTACATAAGGACATCTCTAGCAGATCCCATAATTGAGGTGAAAAAGTTCGGTTCAGATG
ATTAAGGACATCTCTAGTAGATCCCTTATATGACTTTTCCACCCTTCAAAAATGACCTTTTCTTGCAAAACCTCGCCACT
CATTCACATTTAGTTCAGCCGGGGGTGTACTCGGGAAAAGTCGAGCCCCCACCACAAGCAAACCTGGTCAACTGGGTTGT
GCCGGGCAGGCCGGCCAGTTAGCACGCGTG-CCCGGCCCATGATGGGCCGGCCCGACACATGGTTAATTGGATCGTGCCT
AGCACGTGGCCCGCCTAGGGCCTTGCCTGGGCCTGGAGGCAGGGCATGCGTACCGG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr7D_706
--------------------------------------------------------------------------------
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-----------------------------------------CCCTCGAGACTCAAGATACTCTCAAGAGTAATTCAGTTT
TCTCTTAGTCTCCTCCACATAGATCGAACCGACATTGCCCGGTCAAGGTGAATGTGATTTGAAGTCAACCTGCCATGCAT
GGCGCAGATCTCAACTCCCAACTTGGTGCACTTGACCTATATACAAATAGTTTAGTACTACGTACATGACAGGACAAGTT
ATAATAGCTATACCAAAGATTTCG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------TATCTTGAGTGCATATAAA------TAGCATCGTATGTGCACATCAAGATTGAAGCCATCACATG
TCATTCCGTGTCTCCCTCTCTTGCTGATGTGCAGATCTTCCACTCAAGCTCACCCTTGCTTCGCTGTGCATAGTCCACAC
CACAACGCAATGGCTCCGGGTTCATCCGCTCTCGCTCTCAAGGCAGCCGCCGTCGCCGCCATCCTCGCCATTCTGGTCGT
GCCTTCTCTGGGGCGCTGCGGTCACTCTCAGGTGCCAGCAACGCCACCGCCTCCGGCTCTTCCACCATCACCACCATCGC
CACCTCCGGCACCGGCGTCGGAGACGATACTCTGCAAAGACTGTGCAGCCTCCGTCGCCTCGATCTGCAGCGATTCGTGC
AACGGCGTTGCCGGTGTCTGCGGCATCTGCAGTCGCGAGGACTGCAGCGGTGCATGCAACAACG---AAGCGGGCAGCAA
CTGCACCGGCAATCCATGCACCGGCAGCTGTGAGGTGTGCAACTATGCAGCTCGAAGCTGCGACGCCTGTCGTGGCGCTA
ACGAGAGGAACTGCTTCGGTACCTGCAGCGATGAGTGATCCGCGCTCAAATGCGTACCCTGGAG----------------
--------CCCTGAGAACCAGCTAGCACATGTTGCATGCGTCTATGTACTTATGCAGTGTGCATGACATGAGATGCTGTG
ACAACGAATAAAATAGTATTACGGTACTTACAAATGTAACGCGCGCTTCCCTTTTATTTATTTTATTTTAATCAAGAATA
AATTTCACTTTTGTTCGGGCATCCGTTGTATACTCCTAC---TTTCCTTTTCCTTTTCTCGATCTCAATCCATGC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TCCTT
TTTTTTTGATTGGCAAGAGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
AGCACTTGTTAATCTTCCTAAAAAAAAGAGCACTTGTTAATCCACGGATAAATGACAATTGTCAAAGAGGGAAATCTTAC
AAGTATATACA-----ATACGAACACGCCTTGCATTCATTTCATTTTCTGATTATTCAAGGAAACAATGCACCTGCACCT
GCATCTGCATGTATAATGTTGGTACATAAGGACATCTCTAGCAGATCCCATATTTGAGGTGAAAAAGTTCGATTCAGATG
ATTAAGGACATCTCTAGCAGATCCCTTATATGACTTTTCCACCCTTCAAAAATGACCTTTTCTTGCAAAACATGGCCACT
CATTCACATTTAGTTCAGCCGGGGGTGTTCTCAGGAGAAGTCGCGCCCC-TCCGCAACCAAACCTGGTCAACTGGGTTGT
GCCTGGCAGGCCGGCAAGTTAGCACGCATACCCCGGCCCATGATGGGCCGACCCGACACGTGGTTAATCAGGTGTTGCCC
AACACGTGGCTTGCCTAGGGCCTTGCCTGGGCCTGGAGGCTGGGCATGCGTACCAGCACGGCAAGACA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
---------S----------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------S-------------------------
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-------------------------------------------------------S------------------------
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--------------------------------------------------------S-----------------------
-----------------------------S--------------------------------------------------
S----------------S--------------------------------------------------------------
-----------------------------S-----------S-------------SS-----------------------
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------------------------S-----------------S-------------S-----------------------
--------------------------------------------------------------------------------
-----S---------------------------------------------S----------------------------
------------------------------S-------------------------------------------------
----------------------S-----S------------------------------------------SS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--S-------------------------------
---------------------------------------S-----S----------------------------------
---------------SSSSSSSSS-------------------S------------------------------------
------------S-----------------------------S------------------S---S-S-S-S---SSSSS
--------------------SSSS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S----------------S----------------S-
-------------------S------------------------------------------------------------
-------------S--------------------------------S-------------------S---------S---
----------------------------------S---S--------------S--------------------S---S-
---------------S----------S--S-S-S------S--------S---------S-----S----------S---
--S------S---------------SS---------------------------S--SS--------SS-----------
S----------------S---------S------------------SS--------S--S-SS-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_4030
--------------------------------------------------------------------------------
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----------TCAACTCCCAACTTGGTGCT--------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_8680
--------------------------------------------------------------------------------
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---------------------------------------ATAATAGGTGGGCTGACGGC---------------------
--------------------------------------------------------------------------------
------------------------------------------
