>input_sequence_78612
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-----------------------------------------------------------------ATGCAACGGCAGCGC
TTCGGGTCTGACGAAGGGCCGGGAAGAAACCCCGCCGAGGAGAGGAGGCTCAAGAGACCCGCGACCGAGTCCGAGGAGAC
------CGGCGACGACGACGAACTGCCCCCGGGAACCAGGAGGAAGATGAAGGACACGCAGCAGAAGACGAGGCCGAGCG
GCAGCACCGCCGCCGGCGCAGGCGCAGGCACGGCGTCGTCGGCGTCCTCCGTCCGCGCCGTGCTGCAGGACTTCCTGGAG
CAGCAGCAGCGCCTGGACGCGCAGCGGCAGGAGGCGGCGGCGCGGCACGCGCAGGAGCGGCTGGCCTTGGAGCAGCAGTG
GCGGCAGGAGATGCAGAGGCTGGAGCGGGAGCGGCTGATGCTGGAGCAGGCGTGGCGGGAGCGCGAGGAGCAGAGGAGGA
TGAGGGAGGAGGCCAGGGCCGAGAGGAGGGACGCGCTCCTCACCAACCTGCTCAACAAACTCTTGCGCGATGACTTTTAG
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>chr6D_1_TraesCS6D01G244800
AGGCGGCAACGGCGGCGAGTGAGGTTGGAACGGAAGGGGCGGAAGTTTCCTTCGCGCCAAGGAGCGGGAGGTATCGGGAA
ACCGGTAAAAGGAGGAAGGGAAACCGTAGATATGGCGGACTCGGCTCGGAATTTACATCCTGCAAAAAAAAAATTAACAG
CCGGTTGAATATACGTATCTGTTCTGGACAGAAAAATCGTTCTCGTCCGCTATATCGACGATTATTACGGCTGACGGGTT
GTTTTACATGATCTGATAGAG-TTGCTCCTAGCCCCGCCGCCGTCCCGAACAGGAGATCAGCACGCGAATGAAACCAGCG
GACTCAAAAAAGCGTGGGCTGCAAACCCTAGAGCACATGCCGGCGCGCGGTGCCGATACAGAACGTGATTGACCACCGAC
GGCAGAAAATCAATCAA----ACA----AATCCTAAGGTGACAAATGGCAACACCAGAATGTATGTC-AACACTGTCCTG
CGACCGCGGGCAAGTCTTGTCTTTTTTTCTTTTCCTTCGGCACGGCACGTCAGGCTGACAGCGGCGCTGCCGGACGCCGC
GGGCACAGGGTCGCGCTCGCGCGTGCGTGGACTTCATCGCTATCCAGGGAGAAACCGGTCAAACGGACAGCGATGCGAGC
AGCACCTGAAAACGTAT-A-----------GGCATCCGTTCGCAGAGCATGACGTGGCGAGGCGTGGCGTCGCCAGTGTG
GACGGGGGCAAAGCCGTTCTCACCAGCCGGCGGGTGTGAACCGGCGAGG-AGTTCGAGAGGCGTCGGAAAAGAGAACACG
AGCGCGAAGGAGACCAACGGCTGCTGCATGCAAAAGCTGGCCCTGGCGACCCCTTCCACACCCACCAGCACCAACACGCG
TAGCCGCGTAGGCGCACCCTTTATCAACCCGCAGCTCGGC--ACGGCCGATGGTGAACGAACGCTGCGTGCGGCAGGCCG
GCGAGCGCACGAGCGAGCACAATCACAATCACATCACGTCGTCTTCCACGGTGCGCGGCGGGAGCATGCAACGGCAGCGC
TTCGGGTCTGACGAAGGGCCGGGAAGAAACCCCGCCGAGGAGAGGAGGCTCAAGAGACCCGCGACCGAGTCCGAGGAGAC
------CGGCGACGACGACGAACTGCCCCCGGGAACCAGGAGGAAGATGAAGGACACGCAGCAGAAGACGAGGCCGAGCG
GCAGCACCGCCGCCGGCGCAGGCGCAGGCACGGCGTCGTCGGCGTCCTCCGTCCGCGCCGTGCTGCAGGACTTCCTGGAG
CAGCAGCAGCGCCTGGACGCGCAGCGGCAGGAGGCGGCGGCGCGGCACGCGCAGGAGCGGCTGGCCTTGGAGCAGCAGTG
GCGGCAGGAGATGCAGAGGCTGGAGCGGGAGCGGCTGATGCTGGAGCAGGCGTGGCGGGAGCGCGAGGAGCAGAGGAGGA
TGAGGGAGGAGGCCAGGGCCGAGAGGAGGGACGCGCTCCTCACCAACCTGCTCAACAAACTCTTGCGCGATGACTTTTAG
GGAGGGACACGTGGCTCCACGACGTGTGTGCCTAATAATAATCAACAAAATTTGTTACTTGTAGCATAGGTCATGGC--T
GTGGATCAGCAGAAATTCTTTGTTTGCTTTGTCGTTACCTGATCATAGATTAATCCGTAGGAATGTTAAGCCATTTTAGT
AGTCTATATATCTCAGTTGCATACAC-----ATGTAATCACTAGCTAAGATGCTGCCAAATGCCCGGTGTGCCTG-TTTC
TGGAAGGGTAAATGTTTTTTT----CTGCCAGACATCATGGAACAAATATATGTTTTTACAGATTATTATGTACTGCCAT
TAGCGACAATCCATGAAAATTTCGCAAAAAAAT--AAAAAAGATTTGGCAAATGAGAACAGGTGATTAAATGCACAACAT
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--------------------------GTAACGTACTGTAAGTGGTCGACAGAA-TCCACAAATTTTCTGTCTTAGTCTCT
AGTGTGCAAATCTATCATGCAGATGGCTACATAGGCAGATCAA-------------------------------------
------------------AATACGGGCAACATGTTGTTAGTACTTACTAGGAAGTAGGAAGGTGAACAACTAAGTAAAAG
TATACGTTACAAAACCCTGATCAATCTGTAGGCTTCTGATGAAGTTGTGTTCCTTCCGATGTTCAGGTTGTAATGAACTA
CTTCCTGAATA-TTGTCTTCAGTCTACGTTACAAGCTATAAGGGCAGAGCCCCAGTTCACTTTTCCACTGTGAAAAAAAA
TAA-AAAAAAATTGATGTCAGTTCACAGCGG-CACAGGCCATCGCCAAAAAGGGTGAGCAAGTTTGGCAGAAAATAACCT
TTACAAGCGGAAACCGCCACTTGGAGACTTTTCAAGCTCTACCACCAAACCACTAAAATATAGCAAATCTGTTCGCAGCA
AGAACTTGACGTTGATGCAGTGCCTCCAGCCACCAGACATCTCCTACTCCCTGGTATTCACTCTTCACTTCCATCCTTAT
GAGCATCATCATCAGAATCAGTATCAGTTTCTTGGTCATCACCAGAACCTGCGGTGCCG
>chr6A_148
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-------------------------------------------------------------------AAAAAAGTAACGG
CTGGTCAAATATACGGATATGTTCTGGACAGAAAATTCGTTCTCGTGTGCTATATCGACGATTATTATGGCTGACGGGTT
GTTTTACATGATCTCATAGAG-TTGCTCCTAGCCCCGCCGCCGTCCCGAACAGGAGATCAGCACGCGAATGAAACCAGCG
TGCTCAAAAAAGCGTGGGCTGCAAATCCCAGAGCGCATTCCGGCGCGCGGTGCCCTTG-AGAATGTGATTGACCACCGAC
GGCAGAAAATCAATCAATCAAACA----AATCCTAAGGCGACCAATGGCAGCATGAGAATGTATGTC-AACATTATCCTG
CGACCGCGAGCAAGTCTTGTCTTATTT--TTTTCCTTCGACACGGCACGTCAGGCTGACAGCGGCGCTGCCGGAGGCCGC
GGGCACAGCGTCGCGCTCGCGCGTGCGTGCACGTCATCGCTATCCAGGGAGAAACCGGTCAAACGGACAGCGATACGAGC
AGCACCTGAAAAGGCATGA-----------GGCATCCGTTCGCAGGGCATGA----------CGTGGCGTCGCCAGTGTG
GACGGGGGCAAAGCCGTTCTCACCAGCCGGCGGGTGTGAACCGGCGAGGGAGTTCGAGAGGCGTCGCAAAAGAGAACACG
AGCGCGAAGGAGACCAACGGCTGCTGCATGCAAAAGCTGGCCCTGGCGACCCCTTCCACACCCACCAGCACCAACACGCG
TAGCCGCGTAGGCGCACCCTTTATCAACCCGCAGCCTCTGCAACGGCCGATGGTGAACGAACGCTGCGTGCGGCAGGCCG
GCGAGAGCACGAGCGAGCACAATCACAATCACATCACGCAGTCTTCCACGGTGCGCGGCGGGAGCATGCAACGGCAGCTC
TTCGGGTCTGACGAAGGGCCGGGACGGAACCCCGCCGAGGAGAGGAGGCTCAAGAGACCCGCGACCGAGTCCGAGGAGAC
CGCCGGCGGCGACGACGACGACCTGCCCCCGGGAACCAGGAGGAAGATGAAGGACGCGCAGCAGAAGACGAGACCGAGCG
GCAGCGCCGCGGCCGGC---------------GCGGCGTCGGCGTCCTCCGTCCGCGCCGTGCTGCAGGACTTCCTGGAG
CAGCAGCAGCGGCTGGACGCGCAGCGGCAGGAGGCGGCGGCGCGGCACGCGCAGGAGCGGCTGGCCTTGGAGCAGCAGTG
GCGGCAGGAGATGCAGAGGCTGGAGCGGGAGCGGCTGATGCTGGAGCAGGCGTGGCGGGAGCGCGAGGAGCAGAGGAGGA
TGAGGGAGGAGGCCAGGGCCGAGCGGAGGGACGCGCTCCTCACCAGCCTGCTCAACAAACTCTCGCGCGATGACTTTTAG
GGAGGGACACGTGGCTCCACGACGC--GTGCCTGATGATCAACAA-AAAATGTTTCACTGGTAGCGTAGGTTATGGCG--
GTGGATCAGTAGAAATTCTTTGTTTGCTTTGTCGTCACCTGATCATAGATTAATCCGTAGGAATGTTAAGCCTCTTTAGT
AGTCTATAAATCTCAGTTGCATACACATGTAATGTAATCACTAGCTAAGATGCTGCCAAATGCCATGCTGAGTTTCTTTC
TGGAAGGGTAAATGTTTTTTTTTTGCTGCCAGACATCATGGGACAAATATATGTTTTTACAGCTTATTATGTACTGCCAT
TAGCGACAATCCATGAAAATTTCACAAAGAAATAAAAAAAAGATTTGGCAAATGAGAACAGGTGATTAAATGCACAACAT
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--------------------------ATAACGTACTGTAAGTGGTCGACAGAAATCCACAAATTTTCTGTC-TAG--TCT
AGTGTGCAAATCTATCATGCAGATGGCTACATAGGTACTCCCTCTGTAAAGAAATATAAGAGTGTTTAGATCACTACTTT
TTATGGAGGGGGTAGATCAATACGGGCAACATGTTGTTAGTACTTACTGTAC--TAAGAAGGTGAACAACAAAGTAAAAG
TATACGTAACAAAACCCTGATCAATCTGTAGGCTTG---TGAAGTTGTGTTCCTTCCGATGTTCAGATTATAATGAACTA
CTTCCTGAATA-TTGTCTTCAGTCTACGTTGCAGGCTATAAGGGCAGAGCCCCGGTTCACTTTTCCACTGTGAAAAAAAA
AATCAAAAAAATTGATGTCAGTTCACAGCGGTCACAGGCCATCGCCATAAAGGGTGAGCAAGTTTGGCAGAAAATAACCT
TTACAAGCGAAAACCGCCACTTGGAGACTTTTCAAGCTCTACCACCAAACCACTAAAATATAGCACATCTGTTCGCAGCA
AGAACTTGACGTTGATGAAGTACCTCCTGTCACCAGACATCTCCTGCTCCCTGGTATTCACTCTTCACTTCCATACTTAT
GAGCATCATCATCAGAATCAGTATCAGTTTCTTGGTCATCACCAGAACCTGCGGTGCCG
>chr6B_218
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---------------------------------------------------------ACGATTATTACGGCTGACGGGTT
GTTTTACATGATCTGATAGAGTTTGCTCCTAGCCC--CCGCCGTCCTGAACAGGAGATCAGCACACGAAAGAAACCATCG
GGCTCAAAAAAGCGTGGGCTGCAAATCCTAGAGCACATGCCGGCGCGCGGTGCCGATACAGAACGTGATTGATCACCGAC
GGCAGAAAATCAATCAAACAAACAAACAAATCCTCACGCGACCAATGGCAACATCAGAGTGTATGTCAAACATTATCCTG
CGACCGCGAGCAAGTCTCGTCTT--TT--TTTTCCTTCGACACGGCACGTCAGGCTGACAGCGGCGCTGCCGGACGCCGC
GGGCACAGGGTCGCGCTCGCGCGTGCGTGCACGTCATCGCTATCCAGGGAGAAACCGGTCAAACGGACAGCGATGCGAGC
AGCACCTGCAGAGGTACGAGGCGGCGCGCGGGCATCCATTCGCAGAGCATGACGTGGCGTGGCGTGGCGTCGCCAGTGTG
GACGGGGCCAAAGCCGTTCTCACCAGCCGGCGGGTGTGAACCGACGAG-GAATTCGAGAGGCGTCGGAAAAGAGAACACG
AGAGCGAAGGAGACCAACGGCTGCTGCATGCAAAAGCTGGCCCTGGCGACCCCTTCCACACCCACCAGCACCAACACGCG
TAGCCGCGTAGGCGCACCCTTTATCAACCCGCGGCCTCGGCA-CGGCCCATGGTGAGCGTGGCA-------GGCCGGCGA
GCGAGCGCGCGAGCGATCACAATCACAATCACATCACGCCGTCTTCCACGGTGCGCGGCGGGAGCATGCAACGGCAGCGC
TTCGGGTCTGACGAAGGTCCGGGAAGAAACCCCGCCGAGGAGAGGAGGCTCAAGAGACCCGCGACCGAGTCGGAGGAGAC
------CGGCGACGACGACGAACTGCCCCCGGGAACCAGGAGGAAGATGAAGGACACGCAGCAGAAGACGAGGCCGAGCG
GCAGCACCGCAGCCGGCGCAGGCG------CGGCGTCGTCGGCGTCCTCCGTCCGCGCCGTGCTGCAGGACTTCCTGGAG
CAGCAGCAGCGCCTGGACGCGCAGCGGCAGGAGGCGGCGGCGCGGCACGCGCAGGAGCGGCTGGCCTTCGAGCAGCAGTG
GCGGCAGGAGATGCAGAGACTGGAGCGGGAGCGGCTGATGCTGGAGCAGGCGTGGCGGGAGCGCGAAGAGCAAAGGAGGA
TGAGGGAGGAGGCCAGGGCCGAGCGGAGGGACGCGCTCCTCACCAACCTGCTCAACAAACTCTTGCGCGATGACTTTTAG
GGAGTGACACGTGGCTCCACGACGC--GTGCCTAATAATAATCAACAAAATTTGTTACTGGTAGCATAGGTTATGGCTCT
GTGGGTCAGTAGAAATTCTTTGTTTGCTTTGTCTTCACCTGATCATAGATTAATCCGTAGGAATGTTAAGCCATTTTAGT
AGTCTATATATCTCAGTTGCATACAC-----ATGTAATCACTAGCTAAGATGCTGCCAAATGCTCTGCGTGCCTT-TTTC
TGGAAGGGTAAATGTTTTTT-----CTGCCAGACATCATGGAACAAATATACGTTTTTACAGATTATTATGTACTGCCAT
TAGCGACAATCCATGAAAATTTCGCAAAGAAAT--AAAAAAGATTTGGCAAATGAGAACAGGTGAGTCATATGTTGTTGG
AAATTCACTTTGACTCATAGGTGTATATGCACCCATTGTCTAAATACACATTTTAAAAAGTTAAAAAATTCGAGAAAAAA
TCCCACATGTAAATCCGGACATTATACGTGCGTGCACCAAGTTTCGGTGAAAACGGACTTTTTGTGGCTTATGTAAAAAA
AGACAATTTTTGATGCCTGATTATAGCTATTCACGAGGCAATTTTGTATCCCTTTTATACATGCCACAAAATATGTCCTA
TTCTTTTTATACATGCCACAAAATATGTCCTATTTCACCGAAACTTTGTGTGCGGACATATGATGTCCGTATGTACACAC
GGGTTTTTTCTAGAAATTTTTTAACATTTTGAAATGTGTTTTTATACATATTTCATAATAGGTGTATCTATACCTAGGAG
CCAAAATGCCACTCTCGTTATGTTTAATAACGTACTGTAAGTGGTCGACAGAA-TCCACAAATTTTCTGCC-TAGTCTCT
AGTGTGCAAATCTATCATGCAGATGGCTACATAGGTA-------------------------------------------
--------------GATCAATACGGGCAACATGTTGTTAGTACTTACTAG-------GAAGGTGTACAACAAAGTAAAAG
TATACGTTACAAAACCCTGATCAATCTGTAGGCTTG---TGAAGCTGTGTTCCTTCCGATGTTCAGATTGTAATGAACTA
CTTCCTGAATATTTGTCTTCAGTCTACGTTACAAGCTATAAGGGCAGAGCCCCAGTTCACTTTTCCACTGAAAAAAAATT
-----------TTGATGTCAGTTCACAGCGGTCACAGGCCATCGCCATAAAGGGTGATCAAGTTTGGCAGAAAATAACCT
TTACAAACGAAAACCGCCACTTGGAGACTTTTCAAGCTCTACCACCAAACCACTAAAATATAGCACATCTGTCCGCAGCA
AGAACTTGACGTTGATGCAGTGCCACCAGTCACCAGACATCTCCTACTCCCTGGTATTCACTCTTCACTTCCATACTTAT
GAGCATCATCAACAGAATCAGTATCAGTTTCTTGGTCATCACCAGAACCTGCGGTGCC-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S----S-
-S---SS--------S--S----------------S----------SS--------------------------------
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-S-----------------------S------------------------------------------------------
--------------------------------------S---S----------S------------------S-S-----
--------S--------------S---SS----------S----------------------------------------
-----------------------------S--S-----------------------------------------------
------------S----------------------------------------------S--------------------
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-----------------------------------SSS-S----------------------------------------
--------------------------------------S-----------------------------------------
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----------S-------------SSSSSS--------------------------------------------------
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-----------------------S--------------------------------------------------------
------------------------SSS--------------------------------S-----------S--------
---------S-------------------------S--------------------------------------------
-----------------------------------------------------------------S-S------S-----
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----------------------------S---------------------------------------------------
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--------------------------S--------------------------------------------S--------
-----------------------------------S-SSS-SS-------------------------------------
--------------------------------------------------SSSS--S-------------S---------
-----------------------------------SSSS---------------------------S-------------
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S-S--------------------------------------------S--------------------------------
---------S-------------------------------------------------------S--------------
-----------------------------S--------------------------------------------S-----
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>forward_35
---------------CGAGTGAGGTTGGAACGGAA---------------------------------------------
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>reverse_1748
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-------------------------------------------------------------------TGTGCCTGTTTCT
GGAAGGG-------------------------------------------------------------------------
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