>input_sequence_78605
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-------------------------------------------------ATGTCAACCAGCACGTTTGCAACCTCGGCCC
GCGCGCTCCAGCACATCATTTCAACAGCCGGTGCCTCCCGCAGAGCGGCCACGAGCCCTCGCCGTCCGTCGTCTCTAGGC
TTCGCCGGCCGAGGAGGCGCGCTGCTGCAGGTTCCGAGCGTCCTTATTAGGTCCTCCCGCTGCAAGCTGGACGTCTCCGC
GGCGGCCGTCTACATGTTGAAGCTGGTGACCCCGGGAGGGCGGGAGTACGAGCTCGAGGCGCCGGACGACGCCTACATCC
TCGACACGGCCGAGAGCGCCGGCGTGGAGCTGCCGTGCGCGTGCCGCGCCGGGGCGTGCTACAAATGCGCCGGCAAGGTT
GAGGCCGGCACGGTCCACCGGGCGGACGGCTCGCTCCTCCACGGCAGGCTGCAGGAGGAAGGCTACGTGCTCATCTGCGT
GTCGTGCCCCAGGTCCGACTGCGTCATACATACCCACAAGGAGGACGACCTTTGGTGA----------------------
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---------------------------
>chr5B_1_TraesCS5B01G517300
GTTTTTTAAACCCGACATTTGCTCAAACTGGTATAGAAGCAGTTTTAAATTCCTAGCCTT--TAATATCATATTAAATGA
ACAATATTGTGTCATAAACATATTGAAAAAACGGCCATCCCTTTATCAATCAGATGAGGATTTAAACCAATATTTTTAGA
GCATTTAAACCAACAATTTGACCGCCATTATGAGCGTGTTGAACTATCCTTTGCAAACAGTTAGCATCAATGTTAAAGAA
GGAAAGGGGAGAGTAGTGCTCTTTGCCTCACACCTTTGAAACTCCCAAATTTTCTCTCAACTACATCATTAACTTGTACT
TCTCACGGTGCCCGTTTTTACTCTTGCTGGGCTCGCGCAGGGGCACATAAATTACAGACGTGAGAGGGGTGTCTCTG-AA
AATCTCTTGTGCCAAGTGGCCGTGCCTGATTGGGTGT-TTTTTTTACCGGAGCTGCAAGTTAGTGGATGGTGGAGTCAAC
TTCTTACAAGTTCATGGACTAAATCATCACCGACCGCGGAAGTTTATGGACCCCCGGTGCTTTTACCTCTGGATGTTAGG
TGTCCTTCCCTTAACCACTACCTCAAACCAGTTCATCCAGGTCTCATTAAATCCTTTCTTTTTAGAATATATGGAAAAGA
GAATCCCAGTTCACTTTGTCATAAGCCTTTTCAAGGAAATA--CAGAGATAGTTGATCTTTGTAATTCAGATGGTACCAT
TTCTACTACTTGAGTAATAGTACAAGTTTTAGCGTGCACAGACATGAATACACACCAAGTTGGCCGTGTATAGGCCGTGT
CCAAGGCTGCTGC-------------------------------------------------------------------
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------------GCTGCGCTTGCGCCGGAGGTCGCCGATGAAGCTTCTCCGCCTAGGTCCGGATCCTAACAGAAACCATT
GGATCCTAACGAAAACAACCCAACACCTGGGCTCACGCCGTCGTCGTGACGCTTCCGCCTATTAAAGGTGACCGCCGCCG
CCGCCACCCACAGCCCACTCCACCACGACAGGAAC----CGCAAGGGAAATGTCAACCAGCACGTTTGCAACCTCGGCCC
GCGCGCTCCAGCACATCATTTCAACAGCCGGTGCCTCCCGCAGAGCGGCCACGAGCCCTCGCCGTCCGTCGTCTCTAGGC
TTCGCCGGCCGAGGAGGCGCGCTGCTGCAGGTTCCGAGCGTCCTTATTAGGTCCTCCCGCTGCAAGCTGGACGTCTCCGC
GGCGGCCGTCTACATGTTGAAGCTGGTGACCCCGGGAGGGCGGGAGTACGAGCTCGAGGCGCCGGACGACGCCTACATCC
TCGACACGGCCGAGAGCGCCGGCGTGGAGCTGCCGTGCGCGTGCCGCGCCGGGGCGTGCTACAAATGCGCCGGCAAGGTT
GAGGCCGGCACGGTCCACCGGGCGGACGGCTCGCTCCTCCACGGCAGGCTGCAGGAGGAAGGCTACGTGCTCATCTGCGT
GTCGTGCCCCAGGTCCGACTGCGTCATACATACCCACAAGGAGGACGACCTTTGGTGACAGCCACTGGCGATAGATTGTT
AGGCTCCATCTTTGGTGCTTGAACCAGCAAAATAAATCTAATCTAATCTCTACCTCTCTACCTACTAATAAACCAGCGAT
TGCTT--CTGGTCGTCCGTGATCGGGCTTTTTTGCAAAACAGTACCCCCGTTTCTGATAAATTGACCCGCAGTCCTACTT
AAAGTGTGGATAACGTTTCGTTTTTT-T-GCAAAAAAAACCCTGCCACCACAGCCCGTACGAGAACACAAGGGTTACCTC
CGCCGCCGCGCCCC---------------------------ATCCCTCCACCGCCGCGCCCCCGTCCCTCTGCTCGGCGC
CGCGCGCCCCATCCCTATGCTAGCCGCCTCGA--CCCATCCCTCCACCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCACCGTTGCCGAATCTGGACGAGATCGGGAGAATCCGCCGGATCTCG-------------CGGAGCTG
CTCGTTGTCCATGCGGGGAGGACGAACGAGCTGCTCGTCGGACATGCACGGAGCACGG----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACAACGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCGCCGGCC-CC-TGGATCCCACTCCCCCT--------------------AGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TTTTCTATACTGCTATCGTGCTACGTCGTCAATGCAGGGTGTGTAGAAG
ATGTTGTCCTGGGTCTGTAGAGGATGCGGTGTGTGGCTGCTTTTGTGTATGCATATATGTTAATTGGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGGTGCAAACAGCGACGGCGAGTAGGCGGCAAGTATACTGCACCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGTAGGAATGCGCGGCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGTACCGG
GGCCAGCTCGACAGGGCATGCCGCCCG
>chr4A_1
GTTTTTTAAACCCGACATTTGCTCAAGCTAGTATAGAAGCGGTTTTAAATTCCTAGCACTTCTAATATCATCTTAAATGA
ACAATATTGTGTCATAAACATATTGGAAAT--GGCCACCCCTTTATCAATCAGATGAGGATTTAAACCAACATTTTTAGA
ACATTTAAACCAACAATTTGGCCACCATTATGAGTATGTTAAACTATCCTCCGCAAACAGTTAGCATCAATGTTAAAAAG
GGAAAGGGGAGAGTAGTGCTCTTTGCCTCACACATTTGAAACTCCCAAATTTTCTCTCAACTACATCATTAACTTGG---
-----CGGTGCCCATTTTAACTCTCGTTGGGCTCATGCGGCCGCACATAAATTACAGACATGACAGGGGTGTATCTGCAA
AATCTCTAGTGCCAAGTGGCCGTGTCTGATTGGGTATGTTTTTTTACCAGAGGTGCAAGTTAGTGGATGGTGGAGTTAAC
GTC-TACAAGTTCATGGACTAAATCATCACCGACCGCGCAAGTTTATGGACCCCCGGTGCTTTTACCTCTGGATGTTAGG
TGTCCTTCCCTTAACCACTACCTAAAACCAGTTCATCCAGGTCTCATTAAATCCATTTTTTCTAGAATAT--GGAAAAGA
GAATCCGAGATCATTTTGTCATAAGCCTTTTCAAAATAAAATCCAGAGATCGTTGATCTTTGTAATTCAGATGGTAACAT
TTCTACTACTTGAGTAATAGTACAAGTTTTAGCATGCACAGAAAGCAATACAGATCAAGCTGGCCGTGTATAGGCCGTGT
CCAAGCAGTGGCGGCGCTGGGGTCTTCCGGGGACTTCCTTGGAATACCATAGATTTTCGCCTAAAAAACTACTAGGTATA
AATATATATTTGGCCTACGAATGCAGCCTAAACACTCCACCTTACCCACGCACAGGACCAGGCCAACTTGCTCGGCGTCT
GGTTAGGCGCGCGTGTTGGGGATCGTAGCAGAAATTTAAAATTTTCTATGCATCACCAAGATCAATCTATGGAGTAATCT
AGCAACAAGGGGAAGGGGAGTGCATCTACATACCCTTGTAGATCGCCAAGCGAAAGCGTTGCAAGAAGGCGGATGAAGGA
GTCGTACTCGCAGCGATTCAGATCGCAGTTGATTCCGATCTAAGCGCCGAACAACGGCGCCTCCGTGTTCAATACACGTG
CAGCCCGGTGACGTCTCTCACGCCTTGATCCAGCAAGGGGAGAAGGAGAGGTTGGGGAAGATTCCATCAGCAGCAACACG
ACGACGTGGTGGTGAAGGAGGAGCATGGCAATCTTGCAGGGCTTCGCCAAGCACCGCGGGAGAGGAGGAGGACTTGGGAG
AGGTGAAGGGCAGCACCAGAACTTGGGTGCGGCTGCCCTCCCACCCCCCACATATATATAGGGGCAAGGGAGATGGGGCC
CGGCCCCCTCAGATCCAATCTGAGGAGGGGGCGGCGGCCAGGGGGGTTGCCTTGCCCCCCAAGGCAAGGGGGGCGCCCCC
CTTTAGGGTTCCCCCAAACCCTAGGCGCATGGGCCCTAGGGGGCGAGGCGCCCAGCCCACTAAGGGGATGGTCCCTCTCC
ACACATAGCCCATAGGGCCCTCCGGGGCAGGTGGACCCTCCCGGTGGACCCCCGGAACCCCTTCGGTGGTCCCGGTACAA
TACCGATAACCCCCCGAATTATTCCGGTGACCGTATGATGACTTCCCTTATATAAATCTTTACCTCCGGACCATTCCGGA
ACTCCTCATGACGTCCGGGAACTCATCCGGGACTCCGAACAACATTCGGTAACCACGTACATCTATTCCCTATAACCCTA
GCGTCATCGAACCTTAAGTGTGTAGACCCTACGGGCTCGGGAGTCATGCAGACATGGCCGAGACAACTCTCCGGTCAATA
ACCAACAGTGGGATCTGGATACCCATGTTGGCTCCCACATGCTCCACTATGATCTCATCGGATGAACCACGATGTCAAGG
ATTCAATCAATCCCGTATACAATTCCCTTTGTCTATCGGTACGATACTTGCCCGAGATTCGATCGTCGGTATCCCGATAC
CTTGTTCAATCTCGTTACCGGCAAGTCTCTTTACTCGTTCCGTAACACATCATCCTGTGATCAACTCCTTGGTCACATTG
TGCATATTATGATGATGTCCTACCGAGTGGGCCCAGAGATACCTCTCCGTTACACGGAGTGACAAATCCCAGTCTCGATT
CGTGCCAACCCAACAGACACTTTCGGAGATACCCGTAGTGCACCTTTATAGCCACCCAGTTATGTTGTGACGTTTGGCAC
ACCCAAAGCACTCCTACGGTATCCGGGAGTTGCACAATCTCATGGTCTAAGGAAATGATACTTGACATTAGAAAAACTTT
AGCATACGAACTACACGATCTTGTGCTAGGCTTAGGATTGGGTCTTGTCCATCACATCATTCTCCTAATGATGTGATCCC
GTTATCAACGACATCCAATGTCCATGGTCAGGTTACGTAACCATCTATTGATCAACGAGCTAGTCAACTAAAGGCTTACT
AGGGACATGGTGTTGTCTATGTATCCACACATGTATCTGAGTTTCCTATCAATACAATTCTAGCATGGATAATAAACGAT
TGTCATGAACAATGAAATATAATATAATAATAACTAATTTATTATTGCCTCTAGGGCATATTTCCAACAGCGCGAGCAGT
CGAGGTCGAGCGCCCTCGATTCAATTGATCCCCTTACCCAATTTCCCTAACCTAGCTCTGCTGAAGGCGGCCGGCCCTCT
CCTGCCCCTCCATCGAGGTCCAGCTCTGGTGGCCAGGCCGGCCATCTCCAGCCTCTCCGTCGCCCCTCCGGTCGGCCCTC
TCCCTCCCCCGCCCTCACCCTCCGGCCCTCTCCTCCCGTCATCTATCCTCCACCCAGTTCTGCGCTCTGCCGTCTGCCTC
TACGGCTCAAGCGCTCCGCAAGAAATATTTGAATACACCGATGACTTGAGTAGAGCTTTGCAAAAAAAGATCAAGATATT
GTTAATGATATGGAGATTGTTGAGCTAACAAAGCTACACTTGCAATGCTTGTGAGAAGATGAAGAATGGAATGTTTTTCT
TTAGAATGTCACTTCTTTTTGTGTAAAGCACAAGATCAAAGTTGTTGACATGGAGGCTCCTTAGTATCCCGCTGGGAGAC
CAAAAAGTGGGTTCTTTAGTGGCACAGAGAATTACCATTGCTTCAAGGTTGAAATGTTTGTGGGTGTCATTGATAGGAAA
CTTCAAGAGTTGGATGCAAGATTTGATGAGGTAAACACTAAACTACTTACTTGCATGGCAGCATTCAATCCACGTGATTC
ATTCGCTGCTTATGATAAAGATAAGTTGGTTAGGCTTGCCAGAAAGTTCTATGCTAAAGATTTCACAAATGATGAATTGT
CAAGACTTCCATGGCAATTAAGCATGAACATTTCTCGTGTGCGTATGGATAAAAGGTTTAGCAATTTGAAGAATCTATGT
GAGCTTTCAGTTCTTTTGAGACAAGAAAGAATGAACAATATCACATTGTTTACAAACTTCTTTAGTTGGTGCTCATTCTT
CCGGTAGCCACTGCTAGCGTTGAGAGGGTATTTTCCTCAATGAAATACGTGAAGAATACACTAAGAAACAAAATGGGTGA
TGAATATTGAACAATTGCTTGGTTACATTCATTGAGAGAGAATTCTTCAAACAAGCGAAAGATGAGGATGTCATCAACCT
CTTCCAAAAAGGGGATCGTAAAGCTATATTGTAATTTCTTTGGTTGTTTGTAATCTTCATCAAATGTATGGTCATTGAGT
CATTGATGTTGCCATCTTACTGTACATTTATCGTTCTATTATATTGCTTTGGCAAATTTACTCAGTACTAACAAATTCCT
GGCTCCAAGGCTGCTGCGCTTGCGCCATAGGTCGCCGATGAAGCTTCTCCCTGTAGGTCCGGATCCTAACAGAAACCATC
GGATCCTAACGAAACCAACCCACCACCGGGGCTCACGCCGTCGTCGTGACGCTTCCGCCTATTAAAGGTGACCGCCGCCG
CCGCCGCGCACAGCCCACTCCACTACGACAGGAAAGAAACGCAAGGGAAATGTCAACCAGCACGTTTGCAACCTCGGCCC
GCGCGCTCCAGCACATCATTTCAACAGCCGGTGCCTCCCGCAGAGCGGCCACGAGCCCTCGCCGTCCGTCGTCTCTACGC
TTCGCCGGCCGAGGAGGCGCGCCGCTGCAGGTCCCGAGCCTCCTTATTAGGTCATCCCGCTGCAAGCCGGACGTCTCAGC
GGCGGTCGTCTACAGGGTGAAGCTGGTGACCCCGGGAGGGCGGGAGTACGAGCTGGAGGCGCCGGACGACGCCTACATCC
TCGACACGGCCGAGAGCGCCGGCATGGAGCTGCCGTGCGCGTGCCGCGCCGGGGCGTGCTACAAATGCGCCGGCAAGGTC
GAGGCCGGCACGGTCCACCGGGCGGACGGGTCGCTCCTCCACGGCAGGCTGCAGGAGGAAGGCTACGTGCTCATCTGCGT
GTCGTGCCCCAGGTCCGACTGCGTCATCCATACCCACAAGGAGGATGACCTTTGGTGAGAACCTCTGGCGATA-------
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>chr4A_1566
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------------------------------------------------------TCTCTACCTACTAATAAACCAGCGAT
TGCTT--CTGGTCGTCCGTCATCGGGCTTTTTTGCAAAACAGTACCCCCGTTTTTGATAAATTGACCCGCAGTCCTACTT
AAAGTGTGGATAACGTTTCGTTTTTT-T-GCAAAAAAAACCCTGCCACCACAGCCCGTACGAGAACACAAGGGTTACCTC
CGCCGCGGCGCCCC---------------------------ATCCCTCCACCGCCGCGCCCCCGTCCCTCTGCTCGCCGC
CGCGCGCCCCGTTCCTATGCTAGCCGCCTCGA--CCCATCCCTCCACCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCACCATTGCCGAATCTGGACGAGATCGGGAGAATCCGCCGGATCTCG-------------CGGAGCTG
CTCGTTGTCCATGCGGGGAGGACGAACGAGCTGCTCGTCGGACATGCAGGGAGCACGG----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACAACGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCGCCGGCC-CC-TGGATCCCACTCCCCCT--------------------AGGCAAACAT
AGTGTTTGATGAAATTTGACTGTAGAATTG-TTTTCTATACTGCTATCGTGCTACGTCGTCAATGCAGGGTGTGTAGAAG
ATGTTGTCCTGGGTCTGTAGAGGATGCGGTGCGTGGCTGCTTTTGTGTATGCATATATGTTAATTGGTGTGT------GT
GTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGGTGCAAACAGCGACGGCGAGTAGGCGGCAAGTATACTGCACCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGTAGGAATGCACGGCGACCTGCTACTGCACTAATAATAGCCTTGACGGAGTACCGG
GGCCAGCTCGACAGGGCATGCCGCCCG
>chr4B_1566
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------------------------------------------------------TCTCTACCTACTAATAAACCAGCGAT
TGCTT--CTGGTCGTCCGTCATCGGGCTTTTTTGCAAAACAGTACCCCCGTTTCTAATAAATTGACCCGCAGTCCTACTT
AAAGTGTGGATAACGTTTCATTTTTT-T-GCAAGAAAAACCCTGCCATCACAGCCCGTACGAGAACACAAGGGTTACCTC
CGCCGCCGCGCCCC---------------------------ATCCCTCCACCTCCGCTCCCCCGTCCCTCTGCTCGCCGC
CGCGCGCCCCGTCCCTATGCTAGCCGCCTCGA--CCCATCCCTCCACCGCCGCGCCCAC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCGTTGCCGAATCTGGACGAGATCGGGAGAATCTGCCGGATCTCG-------------CGGAGCTG
CTCATTGGCCATGCGGGGAGGACGAACGAGCTGCTCGTCGGACATGCAGGGAGCACGA----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACAACGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCGCCGGCC-CC-TGGATCCCACTCCCCCT--------------------AGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGCTACGTCGTCAATGCAGGGTGTATAGAAG
ATGTTGTCCTGGGTCTGTAGAGGATGCGGTGCGTGGCTGCTTTTGTGTATGCATATATGTTAATTGGTG--T------GT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTGCAAACAGCGACGGCAAGTAGGCGGCAAGTATACTGCACCGAGAAGC
GATACAGGGGAATGAAGCAAGCGAGTAGGAATGCGCGGCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGTACCGG
GGCCAGCTCGACAGGGCATGCCGCCCG
>chr2D_1572
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------------------------------------------------------------CCTAATAATAAACCAGCGAT
TGTTT--CTGGTCGTCCGTCATTGGGCTTTTTTGCAAAAAAAGTCCCCCCGTTCTGATAAATTGACCTGCAGTCCTACTT
AAAATGTGGATAACGTTTCGTTTTTTTT-GCAAAAAAAACCCTGCCACCCCAGCCCGTACGAGAACACGAGG--------
----GCCGCGCCCC---------------------------ATCCCTCCACCGCCGCGCCCCCGTCCCTCTGCTCGCCGC
CGCGC-CACCGTCCCTCTGCTCGCCGCCACGCGCCCCGTCCCTCCGACGCCGCGCCCCC-GTCAATCCTCTCCTTGGTGC
CCGTCCTCGCTCCGCCGTCGCCGAATCTGGACGAGATCGCGAGAATCCGCCGCATCTCG-------------CGCAGCTG
CTCGTCGGCCATGCGGGGAGGATGAACGAGCTGCTCGTCGGACATGCAGGGAGCACGG----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACGGCGCACTCCTCCTACTTGCC
GCCCGGTATACCTCTCCTACTCGCCGGCCCCC-TGGATCCCACTCCCCCTATCATAATATTCTGATTTCCAGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTTTTTTTCTGTACTGCTATCGTGTTACTTCGTCAATTCAGGGTGTGTAGGGG
ATGTTGTCCTGGGTCTGTAGAGGATGCGGTGCGTGGCTGCTTGTGTGTATGCATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTGTGTGTGTGCAGGGTGCAAACAGCGACAGCGAGTAGGCGGCAAGTATACTGCACCGAGAAAC
GATACAGGGGCATGAAGCAAGCGAGCAGGTGTGCGCGGCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGCACCGA
GGCCGGCTCGACAGGGCATGCCGCCCG
>chr7D_1572
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------------------------------------------------------------CCTAATAATAAACCAGCGAT
TGCTT--TTGGTCGTCCGTCATCGGGCGTTTTTGCAGAAAAGTACCCCCGTTTCTGATAAATTGACCCGCAGTCCTACTT
AAAGTGTGGATAACGTTTCGTTTTCTTTTGCAAAAAACCCCCTGCCACCACAGCCTGTACGAGAACACGAGGGTTACCTC
CACCGCCGCGCCCC---------------------------ATCTCTCCCCTGTCGCGCCCCCGTCCCTCTGCTCGCTGC
CGCGCGCACCGTCCCTCTGCTAGCCGCCTCGA--CCCATCCCTCCACCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCGTCGCCGAATCTGGAAGAGATCGGGAGAATCCGCCGCATCTCG-------------CGCAGCTG
CTCGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGGGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGTGCCCAGCTCCCTCGACAGCGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCTCGGGCCCCC-TGGATCCCACTCCCCCTACCATAATAGTCTGATTTCGAGGCAAACAT
AGTGTTAGATGAAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGCTACGTCGTCAATTCAGGGTGTGTAGAAG
ATGTTGGTCTGGGCCTGTAGAGGATGAGGTGCGTGGCTGCTTGTGTGTATGCATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTGT----T--CAGGGTGCAAACAGCGACAACGAGTAGGCGGCAAGTATACTGCGCCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGCATGCGCGGCTACCTGCTACTGCACTAATAGCAGCCTTGACGGAGCACCGG
GGCTGGCTCGATAGGGCATGCCGCCCG
>chr4A_1577
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-----------------------------------------------------------------TAATAAACCAGCGAT
TGCTT--CTGGTCGTCTCTCATCGGGCTTTTTTGCAAAAAAGTATCCCCGTTTCTGATAAATTGACCCGCAGCCCAACTT
AAAGTGTGGAAATGTTCCGCTT---TTTTGCAAAAATAACCCTGCCACCACAGCCCGTACGAGAACACGAGCGTTACCTC
CGCGGCTGCGCCCC---------------------------ATCTCTCCACTATCGTGCCCCCGTCCCTCTGCTCGCCGC
CGCGCGCACCGTCCCTCTGCTAGCCGCCTCGA--ACCATCCCTCCACCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CTGTCCTCGCTCCACCGTCGCCGAATCTGGACGAGATCGGGAGAATCTGCCTCATCTCG-------------CGTAGCTG
CTCGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCTGTCCCACAGCCCCGCTGAAGAAGGCGCCCAGCCCCCTCGACAGCGCACTCCTCCTACTTGCC
GCCCGGTATACCTTCCCTACTCTCCGGCC-CC-TGGATCCCACTCCCCCTACCGTAATATTCTAATTTCGAGGCAAACAT
A-TGTTTGATGAAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGTTACGTCGTCAATTCAGGATGTATAGAAG
ATGTTGTCCTGGGTCTATAGAGGATGCGGTGCGTGGCTGCTTGTGTGTATGCATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTGTGT--T--CAGGTTGCAAACAATGACAGCGAGTAGGCGGCAAGTATACTGCGCCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGCATGCGCGGCGACCTGCTACTGCAGTAATAGTAGCCTTGACGGAGCACCGG
GGCCGGCT-------------------
>chr7A_1577
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-----------------------------------------------------------------TAATAAACGAGCGAT
CGCGG--CTGGTCGTCCGTCATCGGGCTTTTTTGTAAAAAAATCCCTCCGTTCCTAATAAATTGACCCGCAGTCCTACTT
AAAGTGTGGATAACGTTTCGTTTTTTTGCA-AAGTAAAACCCTGCCACCACAGCCCGTACGAGAACACAAGGATTACCTC
CGCCGCCACGCCCC---------------------------ATCCCTCCACCGCCGCGCCTCCGTCCCTCTT--------
-------------------CTAGCCGCCTCCA--CCCCTCCCTCCACCGCCGCGCCCCCGGTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCGTCGCCGAATCTGGAAGAGATCGGGAGAATCCGCCGCATCTCG-------------CGTAGCTG
CTTGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCT---------------------------------CATCGGACATGCAGGGAGCACGGACG
AGCTGGTCATCGGCGTCTGTCCCACAGCCGCGCTCATGACAGCGCC------------CAGCGCACTCCTCCTACTTGGC
GCCCAGTATACCTCCCCTACTCACCGGCCTCC-TGGATCCCACTCCCCCTACCATAACATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGGAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGCTACGTCGTCAATTCAGGGTGTGTAGAAG
ATGTTGTCCTGGGTCTGTAGAGGATGTGGTGTGTGGCTGCTTGTGTGTATGCATGTATGT--------------------
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>chr7A_1577
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-----------------------------------------------------------------TAATAAACGAGCGAT
CGCGG--CTGGTCGTCCGTCATCGGGCTTTTTTGCAAAAAAATCCCTCCGTTCCTAATAAATTGACCCGCAATCCTACTT
AAAGTGTGGATAACGTTTCGTTTTTTTGCA-AAATAAAACCCTGCCACCACAGCCCGTACGAGAACACAAGGATTACCTC
CGCCGCCACGCCCC---------------------------ATCCCTCCACCACCGCGCTTTCGTCCCTCTT--------
-------------------CTAGCCGCCTCCA--CCCCTCCCTCCACCGCCGCGCCCCCGGTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCGTCGCCGAATCTGGAAGAGATCGGGAGAATCCGCCGCATCTCG-------------CATAGCTG
CTTGTCGGCCATGCGGAGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCTCATCGGACATGCAGGGAGCACAGACGAGCTGGTCATCGG--------------------
-------------CGTCTGTCCCACAGCCGCGCTCATGACAGCGCC------------CAGCGCACTCCTCCTACTTGGC
GCCCAGTATACCTCCCCTACTCACCGGCCTCC-TGGATCCCACTCCCCCTACCATAACATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGGAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGCTACGTCGTCAATTCAGGGTGTGTAGAAG
ATGTTGTCCTGGGTCTGTAGAGGATGTGGTGTGTGGCTGCTTGTGTGTATGCATGTATGT--------------------
--------------------------------------------------------------------------------
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---------------------------
>chr2D_1585
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-------------------------------------------------------------------------CAGCGTT
GGCTTAACTGGTCGTCCGTCATCGGGCTTTTTTGCAAAAAAGTACCCCCGTTTCTGATAAATTGACCCGCAGTCCTAATT
AAAGTGTGGATAACGTTTCGTTTTTT-GCA-AAAAAAAACCCTGCCACCACAGCCCGTATGAGAACACGAGGGTTACCTC
CGCCGCCGCGCCCC---------------------------ATCTCTCCACTGCCGCGCCACCGTCCCTCTGCTCGCCGC
CGCGCGCACCGTCCCTCTGCTAGCCGCCTCGA--CCCATCCCTCCACCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCGTTGCCGAATCTGAACGAGATCGGGAGAATCCGCCGCATCTCG-------------CGCAGCTG
CTCGTCGGCCATGCGGGAAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACAGCGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCTCCGGCC-CCCTGCATCCCACTCCCCCTACCATAATATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TTTTCTGTACTGCTATCGTGCTACGTCGTCAATTCAAGGTGTGTAGAAG
ATGTTGTCCTGGGT------------------GTGGCTGCTTGTGTGTATGCATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTGTGTGTT--CAGGGTGCAAACAGCGACAGCGAGTAGGCGGCAAGTATACTGCGCCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGCATGCGCGGCGACCTTCTACTGCACTAATAGTAGCCTTGACGGAGCACCAG
GGCCGGCTCGACAGGGCATGCCGCCCG
>chr1D_1717
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-------------------------------------------------ACAGCCT-TACAAGAACGCGA-GGTTTCCTC
CGCCGCCTCGCCCCCAACCCTCTGCACACCGCCGCACCCTCATCCCTCAGCCGCCGCGCCCCAGTCCCTCTGCTCGCCGC
CGTGC----------------------------CCCCGTCCCTCCACCGCCACGCCCCG-GTCCCTCCGCTCCGCGGTGC
CCGTCCTTGCTCTGCCGTCGCCGAATCTGGACGAGATCGACAGGATCTGTCGCATCTCCCGTGACATCCAACCGCAGCTG
CTCGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCTCGTCGGCCATGCAGGGAGCACGGACGAGCTGCTCGTCGG--------------------
-------------CATCCGTCCCACGGCCCCGCTGAAGACGGCGCCCAGCCCCCTCGACAGCGCATGCGTCCTACTTGCC
GCCTGGTATACCTCCCCTACTTGCCGACCCCC-TGGATCCCACACCCCCTATCATAATATTCTGAATTCGAGGCAACCAT
AGTGTTTGATGAAAATTGACTACTGAATTG-TTTTCTGTACTGCTATCATTCTACGTCATCAATTTAGGGTGTGTAGAAG
ACGTTGTCCTCGGTCTATAGAGGATGTGGTGCGTGGCTGCTTGTGTGTATGCATATGTGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTG----------CAGGGTGCAAACAGCGACAACGAGTAGGCGGCAAGCATACTGTGCCAAGAAGC
GATACAGAGGCATGAAGCAAGCGAGAAGGTGTGCGCGGCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGCACCGA
GGCCGGCTCGACAGGGTGTGCCGCC--
>chr4A_1845
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----------------------------------------------CCGCCGCGCCCCC-GTCCATCCTCTCCTTGGTGC
CCGTCCTCGCTCCGCCATCGCCGAATCTGGATGAGATCGGGATAATCCGCTGCATCTCG-------------CGCAGTTG
CTCGTCAGCCATGTGGGGAGG---------------------------------ACGAACGAGCTGCTCGTCGGACATGC
AGGGAGCACAGACGAGCTGCT---------------------------------CATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGTGCCCAGCCCCCTTGACAGCGCACTCCTCCTACTTGCC
ACCCGGTGTACCTCCCCTACTCGCCGGCC-CC-TGGATCCCACTCCCCCTACCATAATATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TT-----------------GCTACATCGTCAATTCAGGGTGTGTAGAAG
ATGTTATCCTGGGTCTGTAGAGGATGTGGTGCATGGCTGCTTGTGTGTATACATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTG--------CAGGGTGCAAATAGCGACAGCGAGTAGGCGACAACTATACTACGTCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGTGCGCA--GCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGCACCGG
GGCCGGCTCGACAGGGCATGCCGCCC-
>chr5A_1845
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----------------------------------------------CCGCCGCGCCCCC-GTCCATCCTCTTCTCGGTGC
CCGTCCTCGCTCCGCCATCACCGAATCTGGACGAGATCGGGATAATCCGCCGCATCTCG-------------CGCAGCTG
CTCGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ATGAGCTACTCGTCGGACATGCAGGGAGCACAGACGAGCTGCTCATCGG--------------------
-------------CGTCCGTCCCACAGCCCTGCTGAAGACGGCGCCCAGCCCCCTTGACAGCGCACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCGCCGGCC-CC-TGGATCCCACTCCCCCTACCATAATATTCTGATTTCGAGGCAAACAT
AGTTTTTGATGAAATTTGACTATAGAATTG-TT-----------------GCTACATCGTCAATTCAGGGTGTGTAGAAG
TTGTTATCCTGGGTCTGTAGAGGATGTGGTGCGTGGCTGCTTGTGTGTATACATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTGTGTG------CAGGGAGCAAATAGCGAC-GCGAGTAGGCGACAACTATACTACGTCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGTGCGCA--GCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGCACCGG
GGCCGGCTCGACAGGGCATGCCGCCCG
>chr2A_1845
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----------------------------------------------CCGCCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCATCGCCGAATCTGGACGAGATCGGGATAATCCGCCGCATCTCG-------------CGCAGCTG
CTCGTCGGCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCTCATCGGACATGCAGGGAGCACAGACGAGCTGCTCATCGG--------------------
-------------CGTCCGTCCCACAGCCCCGCTGAAGACGGCGCCCAGCCCCCTTGACAGCGCACTCCTCCTACTTGCC
GCCTGGTATACCTCCCCTACTCGCCGGCC-CC-TGGATCACACTCCCCCTACCATAATATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TT-----------------GCTACATCGTCAATTCAGGGTGTGTAGAAG
ATGTTATCCTGGGTTTGTAGAGGATGTGGTGCGTGGCTGCTTGTGTGTATACATATATGTTAATTGGTGGCTG-------
----GTGTGTGTGTGTG----------CAGGGTGCAAATAGCGACAGCGAGTAGGCGACAACTATACTACGTCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGTGCGCA--GCGACCTGCTACTGCACTAATACTAGCCTCGACGGAGCACCGG
GGCCGGCTCGACAGGGCATGCCGCCCG
>chr1A_1845
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----------------------------------------------CCGTCGCGCCCCC-GTCCATCCTCTCCTCGGTGC
CCGTCCTCGCTCCGCCATCGTCGAATCTGGACGAGATCGGGAGAATCCGCCGCACCTCG-------------CGTAGCTG
CTCGTCGTCCATGCGGGGAGG---------------------------------ACGA----------------------
-----------ACGAGCTGCTCGTCGGACATGCAGGGAGCACAGACGAGCTGCTCATCGG--------------------
-------------CATCCGTCCCACAGCCCCGCTGAAGACGCCGCCCAGCCCCCTTGACAGCACACTCCTCCTACTTGCC
GCCCGGTATACCTCCCCTACTCGCCAGCC-CC-TGGATCCCACTCCCCCTACCATAATATTCTGATTTCGAGGCAAACAT
AGTGTTTGATGAAATTTGACTATAGAATTG-TT-----------------GCTACATCGTCAATTCAGGGTGTGTAGAAG
ATGTTATCCTGGGTCTGTAGAGGATGCGGTACGTGGCTGCTTGTGTGTATACATATATGTTAATTGGTGGCTG-------
----GTGTGTGT--GTG----------CAGGGTGCAAATAGCGACATCGAGTAGGCGACAACTATACTACGTCGAGAAGC
GATACAGGGGCATGAAGCAAGCGAGCAGGTGCGCA--GCGACCTGCTACTGCACTAATAGTAGCCTTGACGGAGCACCGG
GGCCGGCTCGACAGGGCATGCCGCCCG
>SNPs
--------------------------S--S----------S----------------SS------------S--------
-------------------------S---SSS-----S--------------------------------S---------
S-------------------S--S----------SS----S---------SS-------------------------S-S
---------------------------------S------------------------------------------SSSS
SSSSS--------S----S-----S-S-------SS--S-SS-----------------S---S--------S-------
-------S----------------S----------S------------S---S-----------------------S---
S--S----------------------------------S-----------------------------------------
-----------------------S------------------------------S--S---S--------SS--------
------S--S---S--------------------SSS--S----------S-------------------------S---
---------------------------------S--------S-SS------S-S----S--------------------
-----SSSSSSSS-------------------------------------------------------------------
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--------------------------SS----------------------SSS--------------------------S
--------------S-------S----S----------------------------------------------------
-----S-S---------------S----------S---------------------------------------------
-----------------------------------------------------------------------------S--
----------------------S---------S------S-------------S-------------S---------S--
-----S--------S-S-------------------------------------S-------------------------
-----------------------S-------------------------------------------------------S
-----------------------------S--------------------------------------------------
---------------------------S-----------------S------------S-S--S---------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------S---------------------------------------------------------------------
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------------------------------------------------S-------------------------------
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-------------------------------------------------------------------------SSSSS--
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>forward_274
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--------------AGTGCTCTTTGCCTCACACC----------------------------------------------
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>reverse_4588
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---------------------------ACATACCCACAAGGAGGACG---------------------------------
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>forward_4115
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---------------CACTCCACCACGACAGGAAC---------------------------------------------
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>reverse_5594
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-------------------------------------------------------------------------TGTGTGT
GTGTGTGTGTGTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------
