>input_sequence_78586
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---------------------------------------------------------------------------ATGGA
CATGGGA---GGAGGGCACGCCATGGGCACGGGCATGGGCGGCGCCGCCCCGGCGGCGGCGGCGGCGCACGGGGGCATGC
GGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACGGGTGGCCCGGCTCGAGCGGC
GGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTCTCCTCCTGCCGCTGGCTCGA
GTCCCGCCTCTCCTCCCGCGACCGGCCCGTGGCGGCGGGGGCGGCGCGCGCCGCCGTGCACGCGCTGCGCGTCGGGATGG
CGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCGCCGGCCACGCGGTGGGGTTC
CTTCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGGGCCAAGGACTACCTGGCGCCGGCGGCGTG
CTGCTAG-------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G306300
TACCATTCAGCATTTTGATTTCTGATAAAGTATGCATGCTATGCCTAATCCTCCAAAAATATCTTTTATGAGAACTGAAT
CAAACACGACCAGATTGTGCTTGTGGTATCGTATTCACTCCATGAGTTGGTTCTACACACT-AAGAAGAAAATTCTCTTT
AAGAACAGACCAGCT---------ACTTAACCATGGGTCTTGGAATTGATAATTTGCATGCTGTATTTCGGTCAATGGCC
TGGTGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCGTGGAAACAAGCACCAGAGTAGTAGTTCAGA--------
AAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAGCTGCCCCGGCGGGACGCA
CAGTGAGCAGTCCTTGAGCACCGGCAGCACCACCCCCCGCCTCGTCGTCACCGAAAATCCCACCCCGCGGCCCTCGATGG
CCGGCGGGGACGGCGGAGGGGACGCCGAGGCGGCCACACGGCGGCGGGTGGAAGGGGGGGCGGTCGGGGTAGCTCGCCCG
GCGGCGCAGCAGGGTGGGCAAGGGTAGCAGCAGAAGGGGACGGCGCCGCCGGTGAGGCTGTGCGCCATCGTCGGCGAGGG
CGATAAGAGGTGATGGGCCTGGGCCGGTACACTGGGCGGCT---AGAAAGAAGATCGCGACCAACCCACCCTTCAAGCT-
--ACCTAATCGGCCCACAATCTGAAAGCCTGTCCACAGAAGA-GGAAAAATGGATCCGCCAT-CCTTCTTCACAAAGATC
CCGTGGGCCGACCCCTCAAGAAAAAAGATCCCGTGGGCCGTGGGTGGTTACGATCTGACTGACAGCCGCGGCTGACGACT
GTGTACTTCCTTTCGCTGCCCAGTGTCGTACATGCGTACTGCACAGGCGCCGCGCCACGCCGCGCCGCCCCGCACATATA
CACCCACGCGGGCGCGGACGCAGATGCAACGAACC---------CCACCAGATCATCATCGGCGGCCAGCGCGCGATGGA
CATGGGA---GGAGGGCACGCCATGGGCACGGGCATGGGCGGCGCCGCCCCGGCGGCGGCGGCGGCGCACGGGGGCATGC
GGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACGGGTGGCCCGGCTCGAGCGGC
GGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTCTCCTCCTGCCGCTGGCTCGA
GTCCCGCCTCTCCTCCCGCGACCGGCCCGTGGCGGCGGGGGCGGCGCGCGCCGCCGTGCACGCGCTGCGCGTCGGGATGG
CGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCGCCGGCCACGCGGTGGGGTTC
CTTCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGGGCCAAGGACTACCTGGCGCCGGCGGCGTG
CTGCTAGGTCTTCTTATCCGT---ATGCATGGGTTTGGAAATTTTGGTGGTGTGATCCTGTTAATCTGGGTGATTGCCAT
CTCACTATTCACAACCGTTCTTGTTTGGTTACATCTTGAATATCGACCGGGATCAACTTTTTTGTTAT-----TTGATTG
AGATGCTGGATTTAGTTGTTCGTGTAGTACTGTCTATCTGTGATGGCCAACATGCATGTGTTTGCACGCGAAATTGACGC
GCAACACCAGGATATTTGTTGTGCTTTCGTGACGACGAACAATTGCTTTACGAGCAAAGCAACAAAGATTTTCTCGCTTT
CATGGAGAAGAACCAGCCGCTTTTCAGGGCAAAACGGCAAAGATC-ACCAAACCCTAGGGCTGCTAGGGCTCGACAAGAA
GTAACGATG-GAAAA-TAGATGTACGTGAAAATAGA--GTTTGTATCGATAGATCGATTGCCGGG-GTTTTTTCAATCGG
CCATGGCCTTACATATAGACGGCACGCTGGACTTGGCGTATTAGATTAAAACTCTGAAGTCAAAACCCACTAGGACATGC
CCTATTTCGGTTGT-TTACAACTTGCA----CTAGC-GGCCCAAATTAACATGTCACGTACAAATCCTCCTGGGCTTACA
AGGAAAATAGTGAAATATTTCGACCATATCGCTAATCATACTAAATAATACACTGGCTCTAGTTCTAACCATGTCATGTA
GATATACTCTTGTAT-TTATAAGGAAATAAT--------AAAATACTCCGGCCGCGTCGCT-ATCATATGCAACAGTAAT
TAATATGTACTAAGAATACTTCTTAATCTAGTCCATGCAAACTCCATACTTCAGCTTAGCATACGAGGTTGGTTAAGAGA
CATCCATGGCAGCAGTATGCTAGTTCAACCCATTCCTGAAATCTGGTCAGCCTTATGTAGATAGCTGCAATATTGAAGCT
ATACATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCGATACTAACTAGCCAAATTACATTGTCAACAC
>chr3A_1
TACCATTCAGCATTTCGATTTCTGATAAAGTACACATACTCTGCCTAGTCCTCCAAAGATATATTTTATGAGAACTGAAT
CAAACACGACCAGACTGTGCTTGTGGTATCGTACTCACTCCATGAGTTGGTTCTACACACTAAAGAAGAAAATTCTCTTT
AAGAACAGACCAGCT---------ACTCAACCATGGGTCTTGGAATTGATCATTTGCATACGGTATTTCGGTCAATTGCC
TGATGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCGTGGAAACAAGCACCAGACTCTTAGTCCTACTAGTTGAG
AAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAGCTGCCCCGGCGGGACGCA
CAGTGAGCAGTCCTTGAGAACCGGCAGCACCACCCCCCGCCTCGTCGTCACCGAAAATCCCACCCCGCGGCCCTCGATGG
CCGGCGGGGGCGACGGAGGGGAGGCCGAGGCGGCCACACGGCGGCGGGTGGAAGGGGGAGCGGTCGGGGTAGCTCGTCCG
GCGGCGCAGCAGGGCGGGTGAGGGTAGCAGCGGAAGGGGCTGGCGCCGCCGGTGAGGCTGTGCGCCATCGTCGGCGAGGG
CGATAAGAGGTGATGGGCCTGGGCCGGTACACTGGGAGGCTAGAAGAAGACGAGAAACCAAC------CCCTTCAAGCTT
AAGCCTAATCGGCCCACGATCTGAAAGCCTGTCCACAGAAGA-GGAAAAATGGATCCGCTAT-CCTCAC-----------
-----------------------AAAGATCGCGTGGGCCGTGGGTGGTTACGATCTGACTGACAGCTGCGTCTGACGACT
GTGTACTTCCTTTGGCTGCCG-GTGTCGTACATGCGTACTGCACAGGCGCCGCGCCGCGCCGGCCCG-CCCGCACATATA
CACCCACGCGGGCGCGGGCGCAGATGCAACGAACGCACAGAACGCCACCAGATCATCATCGGCGTCCAGCGCGCGATGGA
CATGGGAATGGGAGGGCACGGCGTGGGCATGGGCGGCGC---CGCCGCCCCGGCGGCGGCGGCGGCGCACGGGGGCATGC
AGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACGGGTGGCCCGGCTCCAGCGGT
GGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTCTCCTCCTCCCGCTGGCTCGA
GTCCCGCCTCTCCTCCCGCGACCGGCCCGCGGCAGCGGGGGCGGCGCGCGCCGCCGTGCACGCGCTGCGCGTCGGGATGG
CGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCGCTGGCCACGCGGTGGGGTTC
CTGCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGAGCCAAGGACTACCTCGCGCCGGCGGCGTG
CTGCTAGGTCTTCTTATCCGCATCATTCATGGGTTTGGAAAGTTTGGTGGTGTGATCCTGTTAATCTGGGTGATTGCGAT
CTCACCATTCACAACCGTTCTTGTTTGGTTGCATCTTGCATATCGACCGGGATTAACTTTTTTGTCAT-----TTAATTG
AGATGCTGGATTTAGTTGTTGGTGT-------------------------------------------------------
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>chr3B_1
TACCATTCAGCATTTTGATTTCTGATAAAGTATGCATGCTATGTCTAATCCTCCAAAAATATCTTCTATGAGAACTGAAT
AAAACACGACCAGACTCTGCTTGTGGTATCGTATTCACTCCATGAGTTGGTTCTACACACTAAAGAAGAAAATTCACTTT
AAAAACATAGCAGCTACTTAAGTAACTTAACCATGGGTCTTGGAATTGACCATTTGCATAGGGTATTTCGGTCAATGGCC
TGATGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCATGGAAACGAGCGCCAGAGTAGTAGTTCAGA--------
AAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAGCTGCCCCGGCGGGACGCA
CAGCGAGCAGTCCTTGAGCACCGGCAGCACCAGCCCCCGCCTCGTCGTCACCGAAAATCCCACCCCGCGGCCCTCGATGG
CCGGCGGGGGCGGCGTAGGGGAGGCCGAGGCGACCACGCGGCGGCGGGTGGAAGGGGGAGCGGTCGGGGTAGCTCGCCCG
GCGGCGTAGCTGGGCGGGTGAGGGTAGCAGCAGAAGGGGGTGGCGCCGCCGGTGAGGCTTTGCGCCATCGTCGGCGAGGA
CGATAAGGGATGATGGGCCTGGGCCGGTACACTGGGCGGCT---AGAAGAGGAAACACCAAC------CCCTTCAAGCTT
AAACCTAATCGGCCCACGATCTGAAAGCCTGTCCACAGAGGAGGGAAAAATGGATCCGCCATCCCTCAC-----------
-----------------------AAAGATCCCGTGGGCCGTGGGTGGTTACGATCTGACTGACAGCTGCGGCTGACGACT
GTGTACTTCCTTTCGCTGCCG-GTGTCGTACATGCGTACTGCACAGGCGCCGCGCCGCGCCGGCCCG-CCCGCACATATA
CACCCACGCGGGCGCGGACGCAGATGCAACGAACGCACAGAACGCCACCAGATCATCATCGGCGGCCAGCGCGCGATGGA
CAAGGGAATGGGAGGGCACGGCATGGGCATGGGCGGCGC---CGCG---CCGGCGCCAGCGGCAGCGCACGGGGGCATGC
GGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACGGGTGGCCCGGCTCCAGCGGC
GGCATGTACGCGCTCGCGCTCCTCGTCGTCTTTGCGCTCGCCGTGCTCGTGGAGTTCCTCTCCACCTGCCGCTGGCTCGA
GAGCCACATCTCCTCCCGCGACCGGCCGGCGGCGGCGGGGGCGGCGCGCGCCGCCGTGCACGCGCTGCGCGTCGGGATGG
CCTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCGCCGGCCACGCGGTGGGGTTC
CTGCTCTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGGGCCAAGGACTACCTGGCGCCGGCGGCGTG
CTGCTAGGTCTTCTTGTCCGCATCATGCATGGGTTTGGAAAGTTTGGTGGTGTGATCCTGTTAATCTGGGTGATTGCGAT
CTCACTATTCACAACCGTTCTCGTTTGGTTGCATCTTGCCTATCGACCGGGATTAACATTTTTGTTATTTGATTTGATTG
AGATGCTGGATTTAGTTGTTGGTGTCGTACTGT-----------------------------------------------
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>chr2B_1689
CATTG---------------------------------------------------------------------------
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------------------------------------------------------------TTGGCACGCGAAATCGCCAC
GCAACACCAGGATATTTGTCGTGCTTTCGTGATGATGAACAATTGCTTTACAAGCAAAGCAACACAGATTTCCTTGCTTT
CGTGGAGAAGAACCGGCCGCTTTTCAGCGCAAAACGGCAAAGATC-ACCAAACCCTAGGGCTGCTAGGGCTCGGCAGGAA
GTAACAAC--GAAAA-TAGATGTACGTGAAAATAGA--CTTTGTATTGATAGACCGATTGCTA----TTCTTTCCATCTG
CCACAACCTTACATATATACGGCACGCTGGACTTGGCATGTAAGATTAAAACTCTAAAGCTAAAACCGACTAGGACACGC
CCTGGTTTGGTTAT-TTACAATTTGCACTATCTAGT-GGCCCAAATTAACATGTGCA-TACAAATATTCCTGGGCCTACA
AGGAAAACTATAAAATATTCTGGCCATGTTGCTAATCATACGAAATAATGCATTGGCTCAAGTTCTAACCATGTCACGTA
GATATACTCTTCATCTAGTCCATGTCACAATCACACTGAATAATACTCCAGCCACGTCGCA-ATCACACCGAATAATAAC
CATCATGTACTAAGTACACTTCTTCATCTAGTCCATGCAAACTCCATACTTCAGCTTAGCATGCGAGATTAGTTAGGAGA
CGCCCATGACAGCGGTATGCTAGTTCAACGCATCCTTGAAATCTGGTCAGGCTTATGTAGATAACTTCAATATTGAAGCT
ATGCATCAACTAATTAGTTGTATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATTGTCAAAAC
>chr3D_1691
--------------------------------------------------------------------------------
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--------------------------------------------------------TGTGTTGGCACACGAAATCGCCGA
GCAACACCAGGATATCTGTCGTGCTTTGGTGACGACGAACGATTGCTTTACGAGCAAAGCAACAAAGATTTTCTCGCTTT
CGTGGAGAAGAACCGGCCGCTTTTCAGCGCAAAACGGCAAAGATC-ACCAAACCCTAGGGCTGCTAGGGCTCGGCAAGAA
GTAACGAC--GGAAAATAGACGTACGTGAAAATAGA--GTTTGTATTGATAGATCGATTGCTAGG-GGTTTTCCAATCGG
CCATGGCCTTACATATATACGGCACGCTGGACTTGGCATATAAGACTAAAACTCTGAAGCCAAAACCGAATAGGATATGC
CTTATTTCAGTTGT-TTACAACTTGCA----CTAGT-GGCCCAAATTA--ATGTCACGTACAAATCCTCCTGGGCCTACA
AGGAAAATAGTAAAATATTCCGATCATGTCGCTAATCATACTAAATAATACACTGGCTCTAGTTCTAACCATGTCACGTA
GATATACTCTTGTAT-CTACAAGGAAATAAT--------AAAATACTCCGGCCACGTCGCT-ATCACATGCAACAGTAAT
GAACATGTACTAAGCATAC-TCTCCATCTAGTCCATGCAAACTCCATACTTCAGCTTAGCATACGAGGTTGGTTAACAGA
TATTCATGGCAGGAGTATGCTAGTTCAACGCATCCCTGAAATCTGGTCAGCCTTATATAGATAGCTGCAATATTGAAGCT
ATGCATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATCGTCAACA-
>chr3D_1691
--------------------------------------------------------------------------------
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--------------------------------------------------------TGTGTTGGCGCGCGAAATCGGCGC
GCAACACCAAGATATTTGTCGTGCTTTCGTGACGACGAACGATTGCTTTCCGAGCAAATCAACAAAGATC-CCCCGCTTT
CGTGGAGGAGAATCGGCCGCTTTCCAGCGCAAAACGGCAAAGATG-GCCAAACCCTAGGGCTGCTAGGGCTCGGCAGGAA
GTAGCGAC--GGAAAATAGACGTACGTGAAAAAGTAATGTATTTGTTGATAGATCGATTGTT-GG-GGTTTTCCAATCGG
CCATGGCCTTACATATATATGGCACGCTGGACTTGGCGTATAAGACTAAAACTCTCAAGCCAAAACTGACTAGGACATGC
CCTATTTCGGTTGT-TTACAACTTGCA----CTACC-GGCCCAAATTAACATGTCACGTACAAATCCTCCTGTGCCTACA
AGGAAAATAGTAAAATATTCCGGCCATGTCGCAAATCATACTAAATAATACACTGGCTCTAGTTCTAACCATGTTACATA
GATATACTCTTGTAT-ATACAAGGAAATAAT--------AAAATACTCCGGCCACGTCGCT-ATCACATGCAATAGTAAC
CATCATATACTAAGCACACTTCTCCATCTAGTGCATGCAAACTCCATACTTCAGCTTAGCATACGAGGTTGGTTAAGAGA
TATCCATGGCAGCAGTATGCTAGTTCAACACATCCCTGAAATCTCGTCAGCCTTATGTAGATAACTGCAATATTGAAGCT
ATGCATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTACCCAAATTACATCGTCAAC--
>chr5D_1691
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--------------------------------------------------------TGTGTTGGTATGCGAAATCGCCGT
GCAACATCAGGATATTTGACGTGCTTTCGTGACGACGAACAATTGCTTTC-AGGCAAAGCAACAAAGATA-TCTCGGTTT
CGTGGAGAAGAACCAGCCGCTTTTCAGCGCAAAGCGGCAAAGATTGACCAAACCCTAGGGTTGCTAGAGCTCGGCCGAGA
AGAACGACAATGATAAAAGACATACGTGAAAAAGTA--GTTTGTATTGATAGATCGATTGTT-GGC--TTTCTCAATCGG
CC-TGGCCTTACATATATACGGCACGCTGGACTTGGCGTATAAGACTAAAACTCTGAAGCCAAAACCGACTAGGACATGC
CCTATTTGGGTTGT-TTACAACTTGCA----CTAAC-GGTCCAAATTAACATGTCACGTACAAATCCTCCTGGGCCTACA
AGGAAA-TAGTAAAGTATTCCGGCCATATCGCTAATCATACTAAATAATACACCGGCTCTAGTTCTAACCATGTCACATA
GATATACTTTTGTAT-CTACAAGGAAATAAT--------AAAATACTCCAGCCACGTTGCT-ATCACATGTAATAGTAAC
CATCATGTACTAAGCACACTTCTTCATCTAGTCCATGCAAACTCCATACTTCAGC-----ATACGAGGTTGGTTAAGAGA
TATTCATGGCAGAAGTATGCTAGTTCAACGCATCCCTGAAATCTGGTCAGCCTTATGTAGATAACTGCAATATTGAAGCT
ATGCATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATCGTCAACAC
>chr1A_1691
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--------------------------------------------------------TGTGTTGGCACGCGAAATCGCCGC
GCAACACCAGGATATTTGTCGTGCTTTTGTGACGACGAACGATTGCTTTACGAGCAA-GCAACAAAGATTTCCCTGCTTT
CATGGAGGAGAACCGGCCACTTTCCAGCGCAACACGGCGAAGATC-GCCAAACCCTAGGGCTGCTAGGGCTCGGCAAGAA
GTAACGAC--AGAAAATAGACGTACGTGAAAATAGA--GTTTGTATTGATAGATCGATTCTT-GG-GATTTTCCAATCGG
CCATGGCCTTACATATATACGGCACGCTGGACTTGGCATATAAGACTAAAACTCTGAAGCCAAAACCGACTAGGACATGC
CCTATTTCGGTCGT-TTACAACTTGCA----CTAGC-GGCCCAAATTAACATGTCACGTACAAATACTCCTGGGCCTACA
AGGAAAATAGTAAAATATTCTGGCCACGTTGC---TATCACCAGATAATATAGTAACCCAAGCTCTAAGCATACTCGTAC
AAATACCTTGAGCCTTCA--AAGAAAATAAT--------AAAATACTCCCGCAATGTCGCAAATCATATGCAATAGTAAC
CATCATGTACTAAGCACACTTCTCCATCTAGTCCACGCAAACTCCATACTTCAGCTTAGCATACGAGGTTGGTTAAGAGA
TATCCGTGGCAGCAGTATGCTAGTTCAACGCATCCCTGAAATCTGGTCAGCCTTGTGTAGATAACTGCAATATTGAAGCT
ATGCATCAACTGATTAGTTGGATTAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATCGTCAACAC
>chr3D_1692
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---------------------------------------------------------GTGTTGGCACGCGAAATCGCCAC
GCAACAGCAGAATATTTGTCGTCCTTTCATGACGACGAACGATTGCTTTCCAAGCAAAGCAACAAAGATC-CCTCGCTTT
CATGGAGTATAACCGGCCACTTTCTAGCACAAAACGGCAAAGATC-GCCAAACCCTAGGGCTGCTAGGGCTCTGCAGGAA
CTAGCGAC--AGAAAATAGACGTACGTGAAAAAGTAATGTATTTGTTGATAGATCGATTGTT-GGGGGTTTTCCAATCGG
CCGTGGCCTTACACATATATGGCACGCTGGACTTGGCGTATAATACTAAAACTCTCAAGCCAAAACCGACTAGGACATGC
CCTATTTCGGTTCT-TTACAACTTGCA----CT-AC-GGCCCAAATTAACATGTCACGTACAAATCCTCCTGGGCCTACA
AGGAAAATAGTAAAATATTCCGGCCATGTCGCAAATCATACTAAATAATACACTGGCTCTAGTTCTAACCATGTTACGTA
GATATACTCTTGTAA-CTACAAGGAAATAAT--------AAAATACTCCCGCCACGTCGCT-ATCACATGCAATAGTAAC
CATCATATACTAAGCACACTTCTCCACCTAGTCCATGCAAACTCCATACTTCAGCTTAGCATATGAGGTTGGTTAAGAGA
TATCCATGGCAGTAGTATGCTAGTTCAACACATCCCTGAAATTTGGTCAGCCTTATGTAGATAACTGCAATATTGAAGCT
ATGCATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATCGTCAACAC
>chr3B_1693
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----------------------------------------------------------TGTTGGCACGCAAAATTGTCGT
GCAACACCAAGATAATTGTCGTGCTTTCGTGACGACGAACGATTGCTTTACAAGCAAAGCAACAAAGATTTCCTCTCTTT
CGTAGAGGAGAGACGACTGTTATCCAGTGCAAAACGACAAAGATTAACCAAACCCTAGGGCTGCTAGGGCTCGGCAGGAA
GTAGCGAC--AGAAAATAGACGTACGTGAAAAAGTAATGTTTGTATGGATAGATCGATTGTT-GGT--GGTTCCAATCGG
CCATGGCCTTACATATATACGGCACGCTGGACTTGGCGTATAAGACTAAAACTCTGAAGCCAAAACCAACTAGGACATGC
CCTATTTCGGTTGT-TTACAACTTGCA----CTAGC-GGCCCAAATTAACATGTCACGTACAAATCCTCCTGGGCCTACA
AGGAAAATAGTAAAATATTTCGACCATGTCGCTAATAATACTAAATAATACACTCGCTCTAGTTCTAACCATGTCACGTA
GATATACTCTTGTACCTT-TAAGGAAATAAT--------AAAATACTCCGGCCACGTCGCT-ATCACATGCAACAGTAAC
CATCATGTACTAAGCATACTTC----------------------------------------------------------
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>chr5D_1693
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----------------------------------------------------------TGTTGGCACGCGAAATCGCCGT
GCAACACCAAGATATTTGTCGTGCTTTCGTGACGACGAACGATTGCTCTCCAGGCAAAGCAACAAAGATA-TCTCGCTTT
CGTGGAGAAGAACCGGCCGCTTTTCAGCGCAAAGCGGGAAACATTGACCAAACCCTAGGGTTGCTAGAGCTCGGCCGAGA
AGAACGACAAAGATAAAAGATGTACGTGAAAAAGTA--GTTTGTATTGATAGATCGATTGTT-GGC--TTTCTCAATCGG
CCATGGCCTTACATATATATGACACGCTGGACTTGGCGTATAAGACTAAAACTCTGAAGCCAAGACCGACTAGGACATGC
CCTATTTCGGTTGT-TTACAACTTGCA----CTAAC-GGCCCAAATTAACATGTCACGTACAAATCCTCCTGGGCCTACA
AGGAAAATAGTAAAGTATTCCGGCCATATCGCTAATCATACTAAATAATACACCGGTTTTAGTTCTAACCATGTCACGTA
GATATACTCTTCTAT-CTACAAGGAAATAAT--------AAAATACTCCGGCCACGTCGCT-ATCACATGCAATAGTAAC
CATCATGTACTAAGCACACTTCTCCATCTAGTCCATGCAAACTCCATACTTCAGC-----ATACGAGGTTGGTTAAGAGA
TATTCATGGCAGAAGTATGCTAGTTCAACGCATCCCTGAAATCTGGTCAGCCTTATGTAGATAACTGCAATATTGAAGCT
ATACATCAACTGATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATCGTCAACAC
>chr4D_1693
--------------------------------------------------------------------------------
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----------------------------------------------------------TGTTGGCACGCAAAATCGCCGC
GCAACACCAAGATAATTGTCGTGCTTTCGTGACAACGAACGATTGCTTTATGAGCAAAACAACAAAGATTTCCCCGCTTA
CGTAGAGGAGAGACGATCGTTTTTCTGCGCAAAATGACAAAGATCAACCAAATCCTAGGGCTGTTAGGGCATGGCAGGAA
GTAACGAC--GGAAAATAGACGTACGTGAAAACATAGTGTTTGTATTGATAGATCGATTATT-GT-TCTTT--CAATCGG
CCACGACCTTACATATATATGACATGCTGGACTTGGCGTATAAGATTAAAACTCCGGACCTAAAACCGACTAGTACACGC
CCTGGTTCGGTTTTCTTACAATTTGCA----CTAGT-GGCCAAAATTAACATGTCATGTACAAATCTTCCTAGGCCTACA
AGGAAAATTATAATATATTCCGGCCATGTCGCTAATCATACTAGATAATCCACTGGCTCAAG-TCTAACCATGTCATGTA
GATATACTCTTGTATTCTACAAGGAAATAAT--------AAAATACTTCGGCCACGTCGCT-ATCACACTGAATAATAAC
CATCATGTACTAAGCACACTTCTTCATCTGGTCCATGCAAACTCCATACTTCAGCTTAGCATGCGAGATTGGTTAGGAGA
CGTTCATGGCAGCAGTATGCTAGTTTAGCGCATCTCTGAAATCTGGTCAGCCTTATGTAGATAATTGTAATACTGAAGCT
ATGCATCAACTAATTAGTTGGATCAATGATAAAATTAATTTGGCCCATACTAACTAGCCAAATTACATTGTCAACAC
>chr3A_1694
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-----------------------------------------------------------GTTGGCACGCGAAATCGCCGC
GCAATACCAAGATATTTGTCGTGCTTTCGTGACGACGAACGATTGCTTTACGAGCAAAGCAACAAAGATTTCCTCGCTTT
CGTGAAGGAGAACCAGCCGCTTTCCAGCGCAAAACGGCAAAGATC-TCCAAACGCTAGGGCT---------CGGCAGGAA
GTAGCGAC--AGAAAATAGACGTACGTGAAAAAATA--GTTTGTATTGATAGATCGATTGTT-TT-TGTTTTTCAATTGG
CCATAGCCTTACATATATACGGCACATTGGATTTGGCGTATAAGAC--AAACTCTGAAGCCAAAACCGACGAGGACATA-
----------TCGT-TTACAACTTGCA----CTAGCGGGCTCAAATTAATATGTTACGTATAAATACTCTTGGGCCTACA
AGGAAAATAGTAAAATATTTCGGCCACGTCGCTA---TCACCAGATAATATAGTAG-CCAAGTTCTAAGCATACTCGTAC
AAATACCTTGAGCCTTCA--AAGAAAATAAT--------AAAATACTCCAGCAACGTCGTAAATCATATGCAATAGTAAC
CATCATGTACTAAGCACACTTCTCCATCTAGTCCATGCAAACTTCATACTTCAACTTAGCATACGAGGTTGGTTAAGAGA
TGTCCATGGCAGCACTATACTAGTTCAGCGCATCCCTGAAATCTGGTCAGCCTTATGTAGATAACTGCAATATTAAAGCT
ATGCATCAAATGATTAGTTGGATTAATGATAAAATTAATTAGGCCCATACTAACTAGCCAAATTACATCGTCAA---
>SNPs
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------S--------S-S------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------S-----------------------------------S---------------------
--------------S---SS-------------------SS---------------------------------------
------------------------------------------------SSSSS-S-S-S-S-SSSSSS------------
-----------------S------------------------------------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------S-------------
--------------------SS----------------------------------S-----SS---S------------
----------------------------------S---------------------------------------------
--------------------S--------S----SSS-SSSS--------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------S--------------------S-----------------------------------S--
------------------------------S-------S--------------S--------------------------
--------------------S----S-------SSSSSSSSSSSSSSSSSSSSSSS------S-------------S---
-------------------S------------------------------------------------------------
---------------------------S---------------------------------------------S------
-------SS-------------------------------------S--------------SS-----------------
-----------------S-----------------------S-----------------S-------S------------
---------------------------------------------------------------------------S----
-----------S--------------------------------------------------------------------
-----------------------------------------------------S--------------------------
S--S----------S---------S-------------------------------------------------------
-----------------------------S---S----------------------------------------------
---------------------------------------------S-------------------------------
>forward_692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CACTGGGCGGCTAGAAAGAA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_1717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCTGTGATGGCCAACATGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
