>input_sequence_78578
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-----------------------------------------ATGCCGGGATGGGCTCCGTCAAGAAGGT-----------
TCGACCAGGAGGAGTGCATCGAGGTGGCGTGGAACCGGGTGCGCCTGCGCGCGCTGGACCCCGCCATGGTCGACCGCCGC
CATGCCGAGGTGCGCCTTCTCCGCTCCCTCCATCGCGACCACATCATAGGCTTCCACGAGGTCTGGCTCGACCATGACGC
TGGCGTGCTGAACTTCATCACCGAGGTCTGCAACTCGGCGAGCCTTCACGAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTCCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCAGCAACGGCAACACCGGCCATGTAATACCTGCGCCAATCAAT----CTCGCTCGCCTAG
CTAATTGCCTATCCTCTCACACTTCTTGGTT-------CGGAGAGCCTCAACGGCGACGAGGACAACAGTAG--------
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------------------------
>chr3B_1_TraesCS3B01G460100
TATGCTCCCTCTGTTTCACAATGCAATGCATATTAGTTTT-TCAAAAGTCAAATGTC-------TTTGACCAAGTTTCTA
GAATAAACTATCAATATCTGAAATACT-AATAAATAAACTATAAAAGTACATGTGGATAATAATTG--------------
---------------------------------------------TTTAGAACAGAGGGAGTATTAATTAGCATATGGTT
CCATGCGTAAGAAACACGATCTTTAACTGAACTTAATTGACACTAAAACAATAAAATAAGATGATAACTAAGTTTTTTCT
GTAAAGATACTTTGGTTAGTTGTCGCCGGGTCGCTTATGTACACAGCTGATCAGGCCTTAATGTATTAG---TAATGTTA
CATTCAAATGAAAACTGTGATCAATCACTAGTACTATTATGCCTTGATCCTCTCATTTCTGTCTCTTCCTCCTAGAGGTC
GCTAGAAACATGCTTCATTCCCTTTCCTGTTGTTAGTCAGTGCAAAGCATTGCTTTTACTTTAAATATGTTTTTTCTATT
TTAATTCTAACTACCCATCTGAATGGCCAATCTCTACTATACTATTAAACAAGCAAACATATTCATCGCTACGTGCACCC
AGCCTAAGCTACACAGAACAACACGGAGAAATTACAGCCTCCCGATCAGATAGCATAATTTGATCTAACGGTCAAGATTG
CACAAACCCACATCAAAAGTACACTTAGCA-TTTTATTCTGGGCGGACGAAAACTCTGCCACTAGCGAGCGGAGGAAAGA
TTGGTTTGGCAACGACATAATCCCACCCTCAATTAGCGCTAACCTCTCACCTCTAATCCCATCCCC-AATTAGCGCGTCC
CAACCTTCCCAAATCGCGGTCTCA-----GCTCTGCTCCGCCCTCGCCCACCCGCCCGTTTCGCATGCCCCCAAATCCAC
CGTGGCCGCGCCACCGTA---GCAGCAGCACCACCCCGTCATCGACGACAGGAGGAACAGCAGCAACGAGGAGGCGTTTC
AGGAGGTGGACCCGACCGGGCGGTTCGGGCGGTACGCGGCCATGCCGGGATGGGCTCCGTCAAGAAGGT-----------
TCGACCAGGAGGAGTGCATCGAGGTGGCGTGGAACCGGGTGCGCCTGCGCGCGCTGGACCCCGCCATGGTCGACCGCCGC
CATGCCGAGGTGCGCCTTCTCCGCTCCCTCCATCGCGACCACATCATAGGCTTCCACGAGGTCTGGCTCGACCATGACGC
TGGCGTGCTGAACTTCATCACCGAGGTCTGCAACTCGGCGAGCCTTCACGAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTCCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCAGCAACGGCAACACCGGCCATGTAATACCTGCGCCAATCAAT----CTCGCTCGCCTAG
CTAATTGCCTATCCTCTCACACTTCTTGGTT-------CGGAGAGCCTCAACGGCGACGAGGACAACAGTAGGATCTAAC
GTACGGTTCTTGGTCCACCCTTTTCATCGTACTGGATTAGGAATGCTTGCTTGTACCTGGTGCTGATGGTTGGGGTTCTG
CAGACTTGGCAGAGATCGTGAATTTTCTCGGTATCATGCAAA--------------GCGATTCAGTTGAGAGGAATGCAA
CTCTTTGTTCTTT-------------------------------------------------------------------
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----------------------------------------------GAGGCTTACTTTTCTTTAGTGTTAGATTTTGTTA
C-------------ATATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGTGCCATCTTTTGTGGTGTTGCAT
GCCAGAGGCAG---------GCAGTTGGAGCTTCTCCGTCTAATTGTTAACTTGGTGGAAGCTAGCTGCTATACCGACAA
CCTAGAGTGGAGGTTGGTTTAACACTTCACTCTTTGTAGTATAATTTCTCTATGCTAATTATACAAAACCATTAGTCAGA
TTCTCATAACCGGTAGCTATTTTCTGTTAAACATTTTCCAGCATTGTAAGCAGAAAAGGTT-TTTGATGCAAAATGTACT
TCATTGTACAGAAAGTATTAGATGATGTTTTAACCTCAGTGTTGGAGCATCTGACACATACATTACCTGACAAATTGCTC
CCTCACAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCCATACATTACCTGACAAATTGC
TCCCTCGTAGTGTCGTTGTTGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAGAGAAACATGCTTAGA--T
TTTTTTTCAAAAGAGTGCAAGTCTTTTCCTGCTGCTGTCCAAATACAACCAATTTACCCCCTGCAAGTGAACCCAATTTT
ATGTTCTTGTCAGATGCATTATTTAGAAGGCACAAATTTCTAGCACACATATAATTTTGAAAAGGTATGAATCTGTGTTG
CTGTTTTGTGACCCCCCAGATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTATG
GGTGTTTAAAAATCTTTCCTTTAT
>chr5D_1
TATGTTGCCTCTATTCCACAATGCAGTGCATATTAGTTTTTTCAAAAATCAAAAGATGTCCATGTTTGACCAAGTTTCTA
GAATAAACTATCAGTATCTGAAGTACTAAATAAATAAACTATAAAAGTACATGTGGATGTTGATTTTTTTAAACTTGGTC
AAACATTGATATGCTTGACTTTTCAAAACAAAGTATGTACTGTATTTTAAAACGGAGGGAGTATTAATTAGCATATGGTT
CCACGCCTAAGAAGCACAGTCTCTAACTGAACTTAATTGGCACTAAAACAATAAAACAATATGATAACTAGGTTA-TTCT
GTGAAGATAATTTGGTTAATTATCACCGGGTCGCTTATGTACACAGCTGATCATGCCTTATTAATGCATCAATAATGTTG
CATTCAAACGAAAGCTGAGATCAATCACTTGTACTATTATCTCTTGATCCTCCCATTTCCGTCTCTTCCTTTTAGAGGCC
GCTATAAACATGCTTCATTCCCTTTCCTATCGTTAGTCAGTGCAAAGCATTGCTTTTATT-CAAATATGTTCTTTCTATT
TTGATTCTAACTACGCATCTAAATGATCAAT-------------------------------------------------
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------------------------
>chr7A_1
TATGTTGCCTCTATTCCACAATGCAATGCATATTAATTTT-TCAAAAGTCAAAAGATGTCCATGTTT-ACCAAGTTTCTA
GAATAAACTACCAGTATCTGAAGTACTAGATAAATAAACTATAAAAGTACATGTGGATATTGATTTTTTTAAACTTGGTC
AAACATTGATAGGCTTGACTTTTCAAAACAAAGTATGTACTATATTTTAGAACGCAGGGAGTATTAATTAGCATATGGTT
CCACGCCTAAGGAGCATATTATCTAACTGAACTTAATTGGCACTAAAACAATAAAACAAGAAGATAACTAGGTTA-TTCT
ATGAAGATAATTTGGTTAATTATCACCGGGTCGCTTGTGTACACAGCTGATCACGCCTTATTAATGCATCAATAATGTTG
CATTCAAATGAAAGCTGAGATCAATCACTTGTACTATTATCTCTTGATCCTCCCGTTTCCGTCTCTTCCTCTTAGAGGCC
GCTATAGACATGCTTCATTCCCTTTCCTATCATTAGTCGGTGCAAAGCATTGCTTTTATTTCAAATATGTTCTTTCTATT
TTGATTCTAACTACGCATCTAAATG-------------------------------------------------------
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>chr3A_519
ATCTCTAC------------------------------------------------------------------------
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---------------------------------------TACTATTAAACAAGCAAACATATTCATCGCTACGTGCACCC
AGCCTAAGCTACACAGAACAACACGAAGAAATTACAGCCTCCCGATCAGATAACATAATTTGATCTAACGGTCAAGATTA
CACAAAACCACATCAAAAGTACACTTAGCA-TTTTATTCTGGGCGGACGAAAACTCTGCCACTAGCGAGCGGAGGAAAGA
TTGGTTTGGCAACGACATAATCCCACCCTCAATTAGCGCTAACCTCTCACCTCTAATCCCATCCCC-AATTAGCGCGTCC
CAACCTTCCCAAATCGCGGTCTCA-----GCTCTGCTCCGCCCTCGCCCACCCGCCCGTTTCGCATGCCCCCAAATCCAC
CGTGGCCGCGCCGCCGTA---GCAGCAGCACCACCCCGTCATCGGCGGCAGGAGGAACAGCAGCAACGAGGAGGCGTTTC
AGGAGGTGGACCCGACCGGGCGGTTCGGGCGGTACGTGGCCATGCCGGGATGGGCTCCGTCAAGAAGGT-----------
TCGACCAAGAGGAGTGCATCGAGGTGGCGTGGAACCGGGTGCGCCTGCGCGCGCTGGACCCCGCCATGGTCGACCGCCGC
CATGCCGAGGTGCGCCTTCTCCGCTCCCTCCATCGTGACCACATCATAGGCTTCCACGAGGTCTGGCTCGACCATGACGC
TGGCGTGCTGAACTTCATCACCGAGGTTTGCAACTCGGCGAGCCTTCGCAAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTTCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCAGCAACAGCAACACCGACCATGTAATACCTGTGCCAATCAAT----CTCGCTCGCCTAG
CTAATTGCCTATCCTCTCACACTTCTTGGTT-------CGGACAGCCTCAACGGCGACGAGGACAACAGTAGGATCTAAC
GTACGGTTCTTGGTCCACCCTTTTCATCGTACTGGATTAGGAATGCTTTCTTGTACCTGGTGCTGATGGTTGGGGTTCTG
CAGACTTGGCAGAGATCGTGAATTTTCTCGGTATCATGCAAA--------------GCGATTCAGTTGAGAGGAATGCAA
CTCTTTGTTCTTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------GAGGCTTACTTTTCTTTAGTGTTAGATTTTGTTA
C-------------ATATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGCGCCATCTTTTGTGGTGTTGCAT
GCCAGAGGCAG---------GCAGTTGGAGCTTCTCCGTCTAATTGTTAACTTGGTGGAAGCTAGCTGCTATACCGACAA
CCTAGAGTGAAGGTTGGTTTAACACTTCACTCTTTGTAGTATAATTTCTCTATGCTGATTATACAAAACCATTAGTCAGA
TCCTCATAATCGGTAGCTATTTTCTGTTAAACATTTTCCAGCATTGTAAGCAGAAAAGGTT-TTTGATGCAAAATGTACT
TCATTGTACATAAAGTATTAGATGATGTTTTAACCTCAGTGTTGGAGCATCTGACACATACATTACCTGACAAATTGCTC
CCTCATAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCCATACATTACCTGACAAATTGC
TCCCTCGCAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAGAGAAACATGCTTAGA--T
TTTTTT-CAGAAGAGTGCAAGTCTTTTCCTGCTGCTGTCCAAATACAACCAATTTACCCCCTATAAGTGAACCCAATTTT
ATGTTCTTGTCAGATGCATTATTTAGAAGGCACAAATTTCTAGCACACATATAATTTTGAAAAGGTATGAATCTGTGTTG
CTGTTTTGTGACCCCCCAGATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTATG
GGTGTTTAAAAATCTTTCCTTTAT
>chr3A_519
ATCTCTAC------------------------------------------------------------------------
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---------------------------------------TACTATTAAACAAGCAAACATATTCATCGCTACGTGCACCC
AGCCTAAGCTACACAGAACAACACAGAGAAATTACAGCCTCCCGATTAGATAACATAATTTGATCTAACCGTCAAGATTG
CACAAACCCACATCAAAAGTACGCTTAGCA-TTTTATTCTGGGCGGACGAAAACTCTGCCACTAGCGAGCGGAGGAAAGG
TTGGTTTGGCAACGACATAATCCCACCCTCAATTAGCGCTAACCTCTCACATCTAATCCCATCCCC-AATTAGCGCGTCC
CAACCTTCCCAAATCACGGTCTCA-----GCTCTGCTCCGCCCTCGCCCACCCGCCCGTTTCGCATGCCCCCAAATCCAC
CGTGGTCGCGCCGCCGTA---GCAGCAGCACCACCCTGTCATCGGCGGCAGGAGGAACAGCAGCAACGAGGAGGCGTTTC
AGGAGGTGGACCCGACCGGGCGGTTCGGGCGGTACGCGGCCATGTCGGGATGGGCTCCGTCAAGAAGGT-----------
TCGACCAGGAGGAGTGCATCGAGGTGGCGTGGAACCGGGTGCGCCTGCGCGCGCTGGACCCCTCCATGGTCGACCGCCGC
CATGTCGAGGTGTGCCTTCTCCGCTCCCTCCATCGTGACCACATCATAGGCTTCCACGAGGTCTGGCTCGACCACGACGC
TGGCGTGTTGAACTTCATCACTGAGGTCTGCAACTCGGCGAGCCTCCGCGAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAGAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTCCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCAGCAACGGCAACACCGGCCATGTAATACCTGCGCCAATCAAT----CTCGCTAGCCTAG
CTAATTGCCTATCCTCGCACCCTTCTTGGTT-------CGGACAGCCTCAACGGCGACGAGGACAACAGTAGGATCTAAA
GTACGGTTCTTGGTCCACCCTTTTCATCATACTGGATTAGGAATGCTTGCTTGTACCTGGTGCTGATGGTTGGGGTTCTG
CAGACTTGGCAGAAATCGTGAATTTTCTCGGTATCATGCAAA--------------GCGATTCAGGTGAGAGGAATGCAA
CTCTTTGTTCTTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------GAGGCTTACTTTTCTTTAGTGTTAGATTTTGTTA
C-------------ATATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGCGCCATCTTTTGTGGTGTTGCAT
GCCAGAGGCAG---------GCAACTGGAGCTTCTCCGTCTAATTGTTAACTTGGTGGAAGCTAGCTGCTATACTGAAAA
CCTAGAGTGGAGGTTGGTTTAACACTTCACTCTTTGTAGTATAATTTCTCTATGCTGATTATACAAAACCATTAGTCAGG
TTCTCATAATCGGTAGCTATTTTCTGTTAAACATTTTACAGCATTGTAAGCAAAAAAGATT-TTTGATGCAAAATGTACT
TCATTGTACAGAAAGTATTAGATGATGTTTTAACCTCAGTGTTGGAGCATCTGACACATACATTACCTGACAAATTGCTC
CCTCACAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCCATACATTACCTGACAAATTGC
TCCCTCGCAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAGAGAAACATGCATAGA--T
TTTTTT-CAGAAGAGTGCAAGTCTTTTCCTGCTACTGTCCAAATACAACCAATTTACCCCCTGTAAGTGAACCCAATTTT
ATGTTCTTGTCAGATGCATTATTTAGAAGGCACAAATTTCAA--------------------------GAATCTGTGTTG
CTGTTTTGTGACCCCCCATATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTATG
GGTGTTTAAAAATCTTCCCTTTAT
>chr4A_519
ATCTCTAC------------------------------------------------------------------------
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---------------------------------------TGCTATTAAACAAGCAAACATATTTATCACTACGTGCACTC
AGCCTAAGCTACACAGAACAACACGGAGAAATTACAGCCTCCCGATCAGATAACACAATTTGATCTAACCGTCAAGATTA
CAAAAACCCACGTCGAAAGTACGCTTAGCATTTTTTTTCTGGGCGGACGAAAACTCTGCCACTAGCGAGTGGAGGAAAGG
TTCGTTTGGCAACGACATAATCCCACCCCCAATTAGCGCTAACCTCTCATCTCTAATCCCATCCCTAAATTAGCGCATCC
CAGCCTTCCCAAATCGCGGTCTCAGCTCTGCTCTGCTCCGCCCTCGCCCACCCGCCCGCTTCACATGCCCCCAAATCCTC
CGCCGCCGCGCCGCGCGCAGCGCAGCAGCACCACCCCGCCATCGACGGCAGGAGGAACAACAGCAACGAGGACGCGTTCC
AGGAGGTAGACTCGACGGGGCGGTTCGGGCGGTACGCGGCCGTGCTGGGATGGGCTCCGTCAAGAAGGTGTACTGCTGGT
TCGACCAGGGGGTGCAC--CGAGGTGGCGTGGAACCGGGTGCGCCTGCGCGCGCTGGACCCCGCCATGGTCGACCGCCGC
CATGCCGATGTGCGCCTTCTCC--TCCCTTCATCGTGATCACATCATAGGCTTCCACGAGGTCTGGCTCGACCATGACGC
CGGCGTGCTCAACTTCGTCATCGAGGTCTGCAACTCGGCGAGCCTCCGCGAGTC-TTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTCGACCACCTCCACACCCACGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCATCAACGGCAACACCGACAATGTAATACCTGCGCCAATCAATCAATCTCGCTCACCTAG
CTAATTACCTATCCTCGCACACTTCTTGGTCCGGACTCCGGACAGCCTCAACGGCGACGAGGACAACAGTAGGATCCAAC
GTAAGGTTCTTGGTCCACCCTTTTCACCGCACTGGATTAGGAATGCTTGCTTGTACCTGGTGCTGATGGTTGGGGTTCTG
CAGACTTGGCAGAGATCGCGAATTTTCTCGGTATCATGCAAA--------------GCGATTTAGGTGAGAGGAATGCAG
CTCTTTGTTCTTT-------------------------------------------------------------------
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----------------------------------------------GAGGCTTACTTTTCTTTAGTGTTAGATTTTGTTA
CACACAGATGGCAGATATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGCGCCATCTTTTGTGGTGTTGCAT
GGCAGATGCAG---------GCGGTTGGAGCTTCTCCGTCTAATTGTCAACTTGGTGGAAGCTAGCTGCTATACCGACAA
CACAGAGTGGAGGTTAGTTTAACACTTTACTCTTTGTAGTATAATTTCTCTGTGCTGGT--TACAAAACCATTAGTCAGA
TTCTCATAATTGGTAGCTATTTTCAGTTAAACATTTTCCAGCACTGTAAGCAGGAAAGATTGTTTGATGCAAAATGTACT
TCATTGTACAGAAAGTATTAGATGATGTTTTAACCTCAGTATTGGTGCATCTGAAACATAA-------------------
---------------------------------------------------------------ATTACCTGACAAAATGC
TCCCTCGCAGTGT---TGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAAAGAAACATGCATATATTT
TTTTTT-CAGAAGAGTGCAAGCCTTTTCCTACTGCTGTCCAAATACAACCATTTTACCCCCTGTAAGTGCATCCAATTTT
ATGTTCTTGTCAGACGTATTATTTAGAAGGCACAGATTTCTAGCACACGTATAATTCTGAAAAGGTATGAATCTGTGTCG
CTGTCTTGTGACCCCCCAGATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTACG
GGTGTTTAAAAATCTTCCCTTTAT
>chr5A_519
ATCTCTAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------TACTATTAAACAAGCAAACATATTCATCACTACGTGCACCT
AGCCTAAGCTACACAGAACAACACGGAGAAATTACAGGCTCCCGATCATATAACATAATTTGATCTAACGGTCAAGATTA
CACAAACCCACATCAAAAGTACACTTAGCA-TTTTATTCTGGGCGGACGAAAACTCTGCCACTAGTGAGCGGAGGAAAGA
TTGGTTTGGCAACGACATAATCCCACCCTCAATTAGGGCTAACCTCTCACCTCTAATCCCATCCCC-AATTAGCGCGTCC
CAACCTTCCCAAATCGCGGTCTCA-----GCTCTGCTCCGCCCTCGCCCACCCGCCCGTTTCGCATGCCCCCAAATCCAC
CGTGGCCGCGCCGCCGTA---GCAGCAGCACCACCCCGTCATCGACGGCAGGAGGAACAGCAGCAACGAGGAGGCGTTTC
AGGAGGTGGACCCGACCGGGCGGTTCGGGCGGTACGCGGCCATGCCGGGATGGGCTCCGTCAAGAAGGT-----------
TCGACCAGGAGGAGTGCATCGAGGTGGCGTGGAACCGGCTGCGCCTGCGCGCGCTGGACCCTGCCATGGTCGACCGCCGC
CATGCCGAGGTGCGCCTTCTCCGCTCCCTCCATCGTGACCACGCCATAGGCTTCCACGAGGTCTGGCTCGACCACGACGC
TGGCGTGCTGAACTTCATCACTGAGGTCTGCAACTCGGCGAGCCTTCGCGAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTCCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACATCTTCAGCAACGGCAACATCGGCCATGTAATACCTGCGCCAATCAAT----CTCGCTCGCCTAG
CTAATTGCCTATCCTCTCACACTTCTTGGTT-------CGGACAGCCTCAACGGCGACGAGGACAACAGTAGGATCTAAC
GTACGGTTCTTGGTCCACCCT-TTCATCGTACTGGATTAGGAATGCTTGCTTGTACCTGGTGTTGATGGTTGGGGTTCTG
CAGACTTGGCAGAGATCGTGAATTTTCTCGGTATCATGCAAA--------------GCGATTCAGTTGAGAGGAATGCAA
CTCTTTGTTCTTTGAGGAGTGAATTCCATTTTTTACCTTGTAGTTGTACATTTGTGACACATCTTACCCTATTTAGCGGA
ACTTTTATCGAAATGTCAGATTTTGGAGACTTTTAACACGGTTTTACCCCAGTTTTACATTTTGTCTGTTTATGGTCGAT
AGGATCGGCATGTTGCGTCATTGATTTGTAAAAAAAACTGTGAGGATCGGAGGGCATCATTGGCGATCTTGTCCAAGCTT
CTCTTGTCTATCTGTTCCACTCCTTGTGGCCGTCCACATGTTTTTGGATACAGGGCGTCACCTCACACCTTACCTGATGG
ACACACATCAAAAAACAAGGGTCCAAAGATTTCAAAAGGGGTATTCTAGACGAATTTTCACTCGAAGGGGTAATTAGTGT
CACAAATGTATAAATATGGGGTAAAAAGTGGAATTCACTCTTCTTGGAGGCTTACTTTTCTTTAGTGTTAGATTTTGTTA
CA-------------TATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGCGCCATCTTTTGTGGTGTTGCAT
GCCAAAGGCAG---------GCAGTTGGAGCTTCTCCATCTAATTGTTAACTTGGTGGAAGCTAGCTGCTATACCGACAA
CCTAGAGTGGAGGTTGGTTTACCACTTCACTCTTTGTAGTATAATTTCTCTATGCTGATTATACAAAACCATTAGTCAGA
TTCTCATAATCGGTAGCTATTTTCTGTTAAATATTTTCCAGCATTGTAAGCAGAAAAGGTT-TTTGATGCAAAATGTACT
TCATTGTACAGAAAGTATTAGATGATGTTTTAACCTCGGTGTTGGAGCATCTGACACATACATTACCTGACAAATTGCTC
CCTCACAGTGTCGTTGATGAGCGGTTAGAAAGGATGTACAACTTGTAGATTCCATTGACATACATTACCTGACAAATTGC
TCCCTCGCAGTGTCGTTGATGAGTAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAGAGAAACATGCTTAGA--T
TTTTTT-CAGAAGAGTGCAAGTCTTTTCCTGCTGCTGTCCAAATACAACCAATTTACCCCCTGTAAGTGAACCCAATTTT
ATGTTCTTGTCAGATGCATTATTTAGAAGGCACAAATTTCTAGCACACATATAATTTTGAAAAGGTATGAATCTGTGTTG
CTGTTTTGTGACCCCCCAGATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTATG
GGTGTTTAAAAATCTTTCCTTTAT
>chr3A_529
--------------------------------------------------------------------------------
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---------------------------------------TACTATTAAACAAGCAAACATATTCATCGCTACATGCACCC
AGCCTAAGCTACACAGAACAACACGGAGAAATTACAGCCTCCCGATCAGATAGCATAATTTGATCTAACGGTCAAGATTA
CACAAACCCACATCAAAAGTACACTTAGCA-TTTTATTCTGGGCGGACGAGAACTCTGCCACTAGTGAGCGGAGGAAAGA
TTGGTTTGGCAACGACATAATCCCACCCTCAATTAGCGCTAACCTCTCACCTCTAATCCCATCCCC-AATTAGCGCGTCC
CAACCTTCCCAAATCGCGGTCTCA-----GCTCTGCTCCGCCCTCGCCCACCCGCCCGTTTCGCATGCCCCCAAATCCAC
CGTGGCCGCGCCGCCGTA---GCAGCAGCACCACCCCATCATCGACGGCAGGAGGAACAGCAGCAACGAGGATGCATTTC
AGGAGGTGGACCCGACCGGGCGGTTCGGGCGGTACGCGGCCATGCCGGGATGGGCTCCGTTAAGAAGGT-----------
TCGACCAAGAGGAGTGCATCGAGGTGGCGTGGAACCGGGTGCGCCTGTGCGCGCTGGACCCCGCCATGGTCGACCGCCGC
CATGCCGAGGTGCGCCTTCTCCGCTCCCTCCATCGTGACCACATCATAGGCTTCCACGAGGTCTGGCTCGACCATGACGC
TGGCGTGCTGAACTTCATCACCGAGGTTTGCAACTCGGCGAGCCTTCGCAAGTATTTCGACCGCCACAAGCACGTCTCCG
TCAAAGCGCTCAAGAAGTGGGCGCTCCTTGAGGGCCTTGACCACCTCCACACCCGCGACCCCTGCATCATCCACCGCGAC
CGTACTTGCAGCAACGTCTTCAGCAACGGCAACACCGGCCATGTAATACCTGTGCCAATCAAT----CTCGCTCGCCTAG
CTAATTGCCTATCCTCTCACACTTCTTGGTT-------CGGACAGCCTCAACGGCGACGAGGACAACAGTAGGATCTAAC
ATACGGTTCTTGGTCCACCCTTTTCATCGTACTGGATTAGGAATGCTTGCTTGTACCTGGTGCTGATGGTTGGGGTTCTG
CAGACTTGGCAAAGATCGTGAATTTTCTCGGTATCATGCAAA--------------GCGATTCAGTTGAGAGGAATGCAA
CTCTTTGTTCTTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GAGGCTTACTTTTCTTTAGTGTTCGATTTTGTTA
C-------------ATATCTGCTGTGTGACGAGAATTGCAAACTCAGATTCAGCGGGCGCCATCTTTTGTGGTGTTGCAT
GCCAGAGGCAG---------GCAGTTGGAGCTTCTCCGTCTAATTGTTAACTTGGTGGAAGCTAGCTGCTATACCGACAA
CCTAGAGTGGAGGTTGGTTTAACACTTCACTCTTTGTAGTATAATTTCTCTATGCTGATTATACAAAACCATTAGTCAGA
TTCTCATAATCGGTAACTATTTTCTGTTAAACATTTTCCAGCATTGTAAGCAGAAAAGGTT-TTTGATGCAAAATGTACT
TCATTGTACAGAAAGTATTAGATGATGTTTTAACCTCAGTGTTGGAGCATCTGACACATACATTACCTGACAAATTGCTC
CCTCACAGTGTCGTTGATGAGCAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCCATACATTACCTGAAAAATTGC
TCCCTCGCAGTGTCGTTGATGAGAAGTTAGAAAGGATGTACAACTTGTAGATTCCATTGCAGAGAAACATGCTTAGA--T
TTTTTT-CAGAAGAGTGCAAGTCTTTTCCTGCTGCTGTCCAAATACAACCAATTTACCCCCTATAAGTGAACCCAATTTT
ATGTTCTTGTCAGATGCATTATTTAGAAGGCACAAATTTCTAACACACATATAATTTTGAAAAGGTATGAATCTGTGTTG
CTGTTTTGTGACCCCCCAGATGACAAGCAATTTCAAGAACCACCACCATTTCAGTGTGAACATAGAATAAATATAGTATG
GGTGTTTAAAAATCTTTCCTTTAT
>chr3B_1457
--------------------------------------------------------------------------------
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---------------------------------------GGACAGCCTCGACCGCGACGAGGAGAACAGCAGGATCCAGC
GTAAGGTTTCTGGCCCACTCGTTTCGCCGCGCTGAATTGGGGATGCTTGCTTGTGCCTGCTGCTGATGGTTGGCGTTCTG
CAGACTTGGCGGAGATCGCGAATTTCCTCGGTATCACGCCTTCGGTCGACACTGAGGCGATTCAGGTGAGAGGAATGCAG
CTCTTTGTTCTAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GAGGCTTACATTTGTTGAGTATTAGCTTTTGTTA
CACGCAGATC-------TCTGGTGTGTGGTCAGAATTGCAAACTCAGATTCAGCGAGTGTCATCTTTTGTGGTGTTGCAG
GGCAGAGGCAGCTACGACGAGCGGGTGGAGTTCCTCCGTCTAATTGTTGACTTGGTGGAAGCTAGCTGCTATGCCGACAA
TCCAGAGTGGAGGTTAGTTTAC-ACTTTACTGTATGTGGTATACTTTTGCTATGCTGATTATACAAAAGCATTAGTCA--
--CTGATTACCGGTAGCTA-TTTCAGTTAAACATTTTCCAGCACTGTAAACAGAAAGGAATATTTGATGCAAAATGCACT
TCAATATACCGAAAGTATTAGATGCTGTTTTAACCTCAGTATTAGGGCATCTGATACATAAATTATCTGACAAATTGCTC
CCTGGTAGT---GTTGATGAGCAGTTGGC---------------------------------------------------
------------------------------AAAGGATGTACAACTTGTAGATTCCATTGCTGAGAAACAGGCGCAAA---
TTTTTT-CGGAGGAGTGCAAGCTTTTTCCTGCAGATGTTCAAATACAATCGATTTATCCCCTGTAAGTGCACCCATG---
ATATTCTTGTCAATTGTATTATTTAGAAAGCGCAGATTTATAGCACCCATATTTC-CTTAAATGGTATGAATCTATGTTG
CCGTCTTGTGACCCCC-AGTTGACTAGCAATTTCAAGAACCAACACTATTTCACTG------------------------
------------------------
>SNPs
------S-----S--S-------------------------------------S-SS-----------------------
-------------S--------S------------------------------------S-S---S--------------
-----------------------------------------------------S--------------------------
---S--S------S---SS---S----------------S----------------S-------------S---SS----
--S------S--------S--S--S----------------------------S------S-SSSSS-S----------S
-------------S---S-----------S----------SS----------S------S-----------S------S-
----S-----------------------S-S---------------------------S--S---------S--------
--S-----------S-----S----SS----SSSSSSSS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S----------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S----------S-------------------------------------------------------------
------S--S-----------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_381
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ACACAGCTGATCAGGCCTTAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_1236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGACCACATCATAGGCTTCCA------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>forward_384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ACAGCTGATCAGGCCTTAATGT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>reverse_2728
--------------------------------------------------------------------------------
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-------TAGTGTCGTTGTTGAGCAGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
