>input_sequence_78574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGGACATGGGAATGGGAGGGCACGGCGTGGG------CATGGGCGGCGCCGCCGCCCCGGCGGCGGC
GGCGGCGCACGGGGGCATGCAGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACG
GGTGGCCCGGCTCCAGCGGTGGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTC
TCCTCCTCCCGCTGGCTCGAGTCCCGCCTCTCCTCCCGCGACCGGCCCGCGGCAGCGGGGGCGGCGCGCGCCGCCGTGCA
CGCGCTGCGCGTCGGGATGGCGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCG
CTGGCCACGCGGTGGGGTTCCTGCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGAGCCAAGGAC
TACCTCGCGCCGGCGGCGTGCTGCTAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3A_1_TraesCS3A01G296400
TCCAAAGATTCAAATGGCTACCATTCAGCATTTCGATTTCTGATAAAGTACACATACTCTGCCTAGTCCTCCAAAGATAT
ATTTTATGAGAACTGAATCAAACACGACCAGACTGTGCTTGTGGTATCGTACTCACTCCATGAGTTGGTTCTACACACTA
AAGAAGAAAATTCTCTTTAAGAACAGACCAGCTACTC---------AACCATGGGTCTTGGAATTGATCATTTGCATACG
GTATTTCGGTCAATTGCCTGATGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCGTGGAAACAAGCACCAGACTC
TTAGTCCTACTAGTTGAGAAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAG
CTGCCCCGGCGGGACGCACAGTGAGCAGTCCTTGAGAACCGGCAGCACCACCCCCCGCCTCGTCGTCACCGAAAATCCCA
CCCCGCGGCCCTCGATGGCCGGCGGGGGCGACGGAGGGGAGGCCGAGGCGGCCACACGGCGGCGGGTGGAAGGGGGAGCG
GTCGGGGTAGCTCGTCCGGCGGCGCAGCAGGGCGGGTGAGGGTAGCAGCGGAAGGGGCTGGCGCCGCCGGTGAGGCTGTG
CGCCATCGTCGGCGAGGGCGATAAGAGGTGATGGGCCTGGGCCGGTACACTGGGAGGCTAGAAGAAGACGAGAAACCAAC
------CCCTTCAAGCTTAAGCCTAATCGGCCCACGATCTGAAAGCCTGTCCACAGAAGA-GGAAAAATGGATCCGCTAT
-CCTCAC---------------------------------AAAGATCGCGTGGGCCGTGGGTGGTTACGATCTGACTGAC
AGCTGCGTCTGACGACTGTGTACTTCCTTTGGCTGCCG-GTGTCGTACATGCGTACTGCACAGGCGCCGCGCCGCGCCGG
CCCG-CCCGCACATATACACCCACGCGGGCGCGGGCGCAGATGCAACGAACGCACAGAACGCCACCAGATCATCATCGGC
GTCCAGCGCGCGATGGACATGGGAATGGGAGGGCACGGCGTGGG------CATGGGCGGCGCCGCCGCCCCGGCGGCGGC
GGCGGCGCACGGGGGCATGCAGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACG
GGTGGCCCGGCTCCAGCGGTGGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTC
TCCTCCTCCCGCTGGCTCGAGTCCCGCCTCTCCTCCCGCGACCGGCCCGCGGCAGCGGGGGCGGCGCGCGCCGCCGTGCA
CGCGCTGCGCGTCGGGATGGCGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCG
CTGGCCACGCGGTGGGGTTCCTGCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGAGCCAAGGAC
TACCTCGCGCCGGCGGCGTGCTGCTAGGTCTTCTTATCCGCATCATTCATGGGTTTGGAAAGTTTGGTGGTGTGATCCTG
TTAATCTGGGTGATTGCGATCTCACCATTCACAACCGTTCTTGTTTGGTTGCATCTTGCATATCGACCGGGATTAACTTT
TTTGTCATTTA-----ATTGAGATGCTGGATTTAGTTGTTGGTGTGTGCT------------------------CGCTAT
GTTATCTCATTAATGGCCTTGGTAAATGCTTTGGCTAGTAGCCATCCACTCATCGATGTAGGGTTGGCTATTATATTGAG
TCAAGAGCACTACACATCCACAAATTTGCAATGGATGAGATGATTTAGTTCACAAACTTGCAAAAGGTGATCACCTTATC
CTTAAACTTGCAATGGATGTGAAAATTTAGTTTAGAGGCAATCACAAGTTGATAAATGGCGCCACACTGGCCGCGTCATG
GCACACCCGCTCGGCCCGGCA-TTTTTACG-AAAA-ACCCCTCCACCTTTATAGAAATCATGAACGCTGTTGCGCTTGCG
CCTACGTGCCGAGGGCGGTGCCAGCAAACCTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCATCAATAAATATACT
GATATATATACAAA--TACTAGTATGTGTGCATCTTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTGTTGA-------------------------TGGTCTTGCGAGTT-A-CACTCCACGCACAAATCAACA
-------CATGTTCGCCGGTTTTAAAATTCTGGAAAGTGGAAATCCTTTCGCTGCATGGCCGAATGTGTGCAGCAGCAAA
CAACAAGCAGGGAGCGGCAGTGGTCAGCACTGAATCGGGCCATACGAGGACGCAAGCGCGACTGAGACACTAGTAGAAAA
CAGGGCTTTGGTCCAGGCCGGGTCAGCCCATTAGTCCCGGTTCAGTCCAGAACCGGGACCAATGGGGGCATTGGTCCCGG
TTCGTGAGCCCAGGGGGTCGGCCGGGCCACGTGGGCCATTGGTCCTGGTTCATCT
>chr3B_1
TCCAAAGATTC-AATGAATACCATTCAGCATTTTGATTTCTGATAAAGTATGCATGCTATGTCTAATCCTCCAAAAATAT
CTTCTATGAGAACTGAATAAAACACGACCAGACTCTGCTTGTGGTATCGTATTCACTCCATGAGTTGGTTCTACACACTA
AAGAAGAAAATTCACTTTAAAAACATAGCAGCTACTTAAGTAACTTAACCATGGGTCTTGGAATTGACCATTTGCATAGG
GTATTTCGGTCAATGGCCTGATGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCATGGAAACGAGCGCCAGAGTA
GTAGTTCAGA--------AAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAG
CTGCCCCGGCGGGACGCACAGCGAGCAGTCCTTGAGCACCGGCAGCACCAGCCCCCGCCTCGTCGTCACCGAAAATCCCA
CCCCGCGGCCCTCGATGGCCGGCGGGGGCGGCGTAGGGGAGGCCGAGGCGACCACGCGGCGGCGGGTGGAAGGGGGAGCG
GTCGGGGTAGCTCGCCCGGCGGCGTAGCTGGGCGGGTGAGGGTAGCAGCAGAAGGGGGTGGCGCCGCCGGTGAGGCTTTG
CGCCATCGTCGGCGAGGACGATAAGGGATGATGGGCCTGGGCCGGTACACTGGGCGGCT---AGAAGAGGAAACACCAAC
------CCCTTCAAGCTTAAACCTAATCGGCCCACGATCTGAAAGCCTGTCCACAGAGGAGGGAAAAATGGATCCGCCAT
CCCTCAC---------------------------------AAAGATCCCGTGGGCCGTGGGTGGTTACGATCTGACTGAC
AGCTGCGGCTGACGACTGTGTACTTCCTTTCGCTGCCG-GTGTCGTACATGCGTACTGCACAGGCGCCGCGCCGCGCCGG
CCCG-CCCGCACATATACACCCACGCGGGCGCGGACGCAGATGCAACGAACGCACAGAACGCCACCAGATCATCATCGGC
GGCCAGCGCGCGATGGACAAGGGAATGGGAGGGCACGGCATGGG------CATGGGCGG---CGCCGCGCCGGCGCCAGC
GGCAGCGCACGGGGGCATGCGGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACG
GGTGGCCCGGCTCCAGCGGCGGCATGTACGCGCTCGCGCTCCTCGTCGTCTTTGCGCTCGCCGTGCTCGTGGAGTTCCTC
TCCACCTGCCGCTGGCTCGAGAGCCACATCTCCTCCCGCGACCGGCCGGCGGCGGCGGGGGCGGCGCGCGCCGCCGTGCA
CGCGCTGCGCGTCGGGATGGCCTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCG
CCGGCCACGCGGTGGGGTTCCTGCTCTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGGGCCAAGGAC
TACCTGGCGCCGGCGGCGTGCTGCTAGGTCTTCTTGTCCGCATCATGCATGGGTTTGGAAAGTTTGGTGGTGTGATCCTG
TTAATCTGGGTGATTGCGATCTCACTATTCACAACCGTTCTCGTTTGGTTGCATCTTGCCTATCGACCGGGATTAACATT
TTTGTTATTTGATTTGATTGAGATGCTGGATTTAGTTGTTGGTGTCGTACTGTGATGGCCAACGTGTATGTTGCCGCTAT
GTTATCTCATTAATGGCCTTGGTAAATGCTTTGGCTA-------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CTGGCCATC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3D_1
TCCAAAGATTC-AATGGATACCATTCAGCATTTTGATTTCTGATAAAGTATGCATGCTATGCCTAATCCTCCAAAAATAT
CTTTTATGAGAACTGAATCAAACACGACCAGATTGTGCTTGTGGTATCGTATTCACTCCATGAGTTGGTTCTACACACTA
A-GAAGAAAATTCTCTTTAAGAACAGACCAGCT---------ACTTAACCATGGGTCTTGGAATTGATAATTTGCATGCT
GTATTTCGGTCAATGGCCTGGTGAGCACAGCTACCGCCGGTCTATCGATAAAAATGCGCGTGGAAACAAGCACCAGAGTA
GTAGTTCAGA--------AAAAGATAGACCTTGAGGAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCAGAG
CTGCCCCGGCGGGACGCACAGTGAGCAGTCCTTGAGCACCGGCAGCACCACCCCCCGCCTCGTCGTCACCGAAAATCCCA
CCCCGCGGCCCTCGATGGCCGGCGGGGACGGCGGAGGGGACGCCGAGGCGGCCACACGGCGGCGGGTGGAAGGGGGGGCG
GTCGGGGTAGCTCGCCCGGCGGCGCAGCAGGGTGGGCAAGGGTAGCAGCAGAAGGGGACGGCGCCGCCGGTGAGGCTGTG
CGCCATCGTCGGCGAGGGCGATAAGAGGTGATGGGCCTGGGCCGGTACACTGGGCGGCT---AGAAAGAAGATCGCGACC
AACCCACCCTTCAAGCT---ACCTAATCGGCCCACAATCTGAAAGCCTGTCCACAGAAGA-GGAAAAATGGATCCGCCAT
CCTTCTTCACAAAGATCCCGTGGGCCGACCCCTCAAGAAAAAAGATCCCGTGGGCCGTGGGTGGTTACGATCTGACTGAC
AGCCGCGGCTGACGACTGTGTACTTCCTTTCGCTGCCCAGTGTCGTACATGCGTACTGCACAGGCGCCGCGCCACGCCGC
GCCGCCCCGCACATATACACCCACGCGGGCGCGGACGCAGATGCAACGAACC---------CCACCAGATCATCATCGGC
GGCCAGCGCGCGATGGACATGGGA---GGAGGGCACGCCATGGGCACGGGCATGGGCGG---CGCCGCCCCGGCGGCGGC
GGCGGCGCACGGGGGCATGCGGATGCACTACATGCACATGACCTTCTACTGGGGCAAGAACTCGGAGATCCTCTTCCACG
GGTGGCCCGGCTCGAGCGGCGGCATGTACGCGCTCGCGCTCCTCGTCGTCTTCGCGCTCGCCGTGCTCGTGGAGTGCCTC
TCCTCCTGCCGCTGGCTCGAGTCCCGCCTCTCCTCCCGCGACCGGCCCGTGGCGGCGGGGGCGGCGCGCGCCGCCGTGCA
CGCGCTGCGCGTCGGGATGGCGTACGTCCTCATGCTCGCGCTCATGTCGTTCAACGTCGGCGTGCTCCTCGTGGCAGTCG
CCGGCCACGCGGTGGGGTTCCTTCTGTTCAGGGCCGGCCTGTTCGGCGGACAGGCGCAGGTGGAGGACGGGGCCAAGGAC
TACCTGGCGCCGGCGGCGTGCTGCTAGGTCTTCTTATCCGT---ATGCATGGGTTTGGAAATTTTGGTGGTGTGATCCTG
TTAATCTGGGTGATTGCCATCTCACTATTCACAACCGTTCTTGTTTGGTTACATCTTGAATATCGACCGGGATCAACTTT
TTTGTT-----ATTTGATTGAGATGCTGGATTTAGTTGTTCGTGT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr4B_1737
TTGGCTTAATTATAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGCACTACAGACCCACAAATTTGCAATGGATGTGATGATTTAGTCCATAAACTTGCAAAAGATGATCACCTTATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTCCAACACCAATCACAAGTTGACAAATGGCGCCACGCTGGCCACGTCGTG
GCACACCCGATCGGCCCAGCA-TTTTTACA-AAAATACCCCTCCGTCTTTATAGAAATCATGAACGTTGTTGTGCTTGCG
CCTACGTGCCGAGGGTGGTGCTAGCAAT-CTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAACATATT
GGTATTTATAA--GAG---TACTATGTGTGCATATTGATTATAATTGATAAGGTATTGTATGTGTGGAGCCACCTGAGTT
GATTGCTGACTTGCGGATGCATGGTCCTGATGCATCGGCAAGTGGTCTTGCGAGTT-A-CACTCCGCGCCCAAATCAACA
-------CACGTTCGCCGGTTTCAAAATTCTCGAAAGTGGAAATCCTTTCGCTGCATGGCCGAATATGTGCAGCAGCAAA
CAACAAGCAGGGAGCGGCAGTGGCCGTCACTGAATCGGGCCATACGAGGACGCAAGCGCAACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr6B_1743
ATTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGAG
GCAAGAGCACTACAGACCCACAAACTTGCAATGAATGTGATGGTTTAGTCCACAAACTTGCAAAAGGTGATCACCTCATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTCCAAGGCCAATCAAAAGTTGACAAATGGCGCCACGCTGGCCACGTCGTG
GC-CACCCGCTTGGCCCGGCG-TTTTTACG-AAAA-ACTCCTCCACCTTTATAGAAATCATGAACGCTGTTGCGCTTGCG
CCTATATGCCGAGGGCGGTGCTAGCAAT-CTAGCTAGGATTGGCGGCTGCCGTACCTCAAATTCCACCAATAAATATACT
GGTATATATAC--GAGTACTAGTATGTGTGCATCTTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGGGTT
GATTGCTGACTTGCTG----TTGGTCCTGATGCATCGGCAAGTGGTCTTGCGAGTT-A-CACTACACGCACAAATCAACA
-------CACATTTGCCGGTTTCAAAATTCTGGAAAGTGGAAATCCTTTCTTTGCATGGCCGAATGTGTGCAACAGCAAA
CAACAAGCAGGGAGCGGTAGTGATCGGCACTGAATCGGGCCATACGAGGACGCAAGCGCGACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2B_1743
ATAATATTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGCACTAGAGACCCACAAACTTGTAATGAATGTGATGGTTTAATCCACAAACTTGTAAAAGATGATCACCTCATC
TCTAAACTTGCAATGTATGTGAAGGTCTAGTCCAGAGCTAATCACAAGTTGACAAATGGCGCCACGCTGGCCGCGTCGTG
GCACACCTGCTCGGCCCGGCTTTTTTTATG-AAAA-TCCCCTCCACCTTTATAGAAATCATGAATGCTGTTGCGCTTGCG
CCTACATGGCGAGGGCGGTGCTAGCAAT-CTGGCTAGGGTCGGTGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATAT--GAGTACTAGTATGTGTGCATATTGATTATAATTGATAAGGTAGTGTACGTGTTGAGCCAGTTGAGTT
GATTGCTGACTTGCTG----ACGGTCCTGATACATCGGCAAGTGGTCTTGCGAGTT-A-CACTCCACGCACCAATCAACA
TTCAACACACGTTCACCGGTTTCGAAATTTTGGAAAGAGGAAATCCTTTCGCTGCATGGCCGAATGTGTGCAGCAGCAAA
CAACAAGCAGGGAGCGGTAGTGGCCGGCACTGAATCGGGCCATACGAGGACGCAAGCGCGACTGAGCAC-----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr4B_1746
ATATG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
GCAAGATCACTACAAACCCATAAACTTGCAATGGATGTGATGGTTTAGTCCACAAACTTGCAAAAGGTGATCACCTCATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTCCAAAGCCAATCACAAGTTGACAAATGGCGCCATGCTGGCCGCGTCGTG
GCACACCCAATCGGCGCAGCA-TTTTACAAAAAAA-AAACCTCCACCTTTATAGAAATCATGAACGTTGTTGTGCTTGCG
CCTACGTGCCGAGGGCGGTGCTAGCAAT-CTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATAT--GAGTACTAGTATGTGTGCATATTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTGCTGATGCATGGTCCTGATGCATCGGCAAGTGGTCTTGCGAGTT-AACACTCCACGCACAAATCAACA
-------CACGTCCGCCGGTTTCAAAATTCTGGAAAGTGGAAATCCTTTGGCTGCATGGCCAAATGTGTGCAACAGCAAA
CAGCAAGCAGGGAGCGGCAGTGGCCGGCACTGAATCGGGCCATACGAGGACGCAAGCGCAACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3A_1751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGCACTGCAGACCCACAAACTTGCAATGAATGTAATAGTTTAGTCCGCAAACTTGCAAAAGGTGATCACCTCATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTCCAAGGCCAATCAAAAATTGACAAATGGCGCAACGATGGCCACGTCGTG
GC-CACCCGCTCGACCCGACA-TTTTTATG-AAAA-CCCCCTCCATCTTTATAGAAATCATGAACGTTGTTGCACTTGCG
CCTACATGCCGAGGGCGCTGCTAGCAAT-TTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATATATGAGTACTAGTATGTGTGCATCTTGATTATAATTGATAAGGTATTATACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTGCTGAT----GGTCCTGATGCAATTGCAAGTGGTCTTGCTAGTT-A-CACTCCACGCACAAATCAACA
-------CACATTCGCCGGTTTCAAAACTCTGGAAAGTGGAAATTATTTCGTTGCATGGCCAAATGTGTGCAACAGCAAA
CAACACGCAGGGAGCGGCAATGGTCGGCACTAAATCGGGCCATATGAGGACGCAAGCGCGACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_1751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGCACTGCAGACCCACAAACTTGCAATGAGTGTGATGGTTTAGTCCGCAAACTTGCAAAAGGTGATCACCTCATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTCCAAGGCCAATCAAAAGTTGATAAATGGTGCCACGATGGCCACGTCGCG
GC-CACCCGCTCGGCACAACA-TTTTTATG-AAAA-ACCCCTCCACCTTTATAGAAATTATGAACGTTGTTGCGCTTGCG
CCTACATGCCGAGGGCGCTGCTAGCAAT-CTGGCTAGGATTGGCGGCTGCCATACCTCAAGTTCCACCAATAAATATACT
GGTATATATAT--GAGTACTAGTATGTGTGCATCTTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTGTTG----ATGGTCCTGATGCATCGGCAAGTGGTCTTGCGAGTT-A-CACTCCACGCACAAATCAAAA
-------CACGTTCACCGGTTTCAAAACTCTGGAAAGTGGAAATCATTTCGTTGCATGGCCGAATGTGTGCAACAACAAA
CAACACGCAGGGAGCAGCAGTGGTCGGCACTGAATCGGGCCATATGAGGACGCAAGCGCGACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chrUn_1751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGCACTACAGACCCACAAATTTGCAATGGATGTGATGGTTTAGTCCACAAACTTGCAAAAGATGATCACCTCATC
CTTAAACTTGCAATGTATGTGAAGATTTAGTCCAAAGCCAATCACAAGTTGACAAATGGCGCCACGCTGGCCGCGTCGTG
GCGCACCCGATTGGCCCAGCA-TTTTTAC--AAAA-AACCCTCCATCTTTATGGAAATCATGAACGTTGTTGCGCTTGCG
CCTACGGGCCGAGGGCGGTGCTAGCAAT-GTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATAC--GAGTGCTAGTATGTGTGCATATTGATTATAATTCATAAGGTATTGTACATGTTGAGCCAGCTGAGTT
GATTGCTGACTTGCTGATGCATGGTCCTGATGCATCGGCGAGTGGTCTTGCGAGTT-A-CACTCCACGCATAAATCAACA
-------CACGTTCGCCGGTTTCAAAATTCTGGAAAGTGGAAATCCTTTCGCTGCATGGACG-ATGTGTGCAGCAGCAAA
CAACAAGCAGGGAGCGGCAGTGGCCGGCACTGAATCGGGCCATACGAGGACGCAAGCGCAACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr6A_1751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GCAAGAGGACTATAGACCCATAAACTTGCAATAGATATGATGGTTTAGCCCACAACCTTGCAAAAGATGATCACCTCATC
CCTAAACTAGCAATGTATGTGAAGATTTAGTCCAAAACCAATCAAAAGTTGACAAATGACGCCACGCTGGCCATGTCATG
CCACACCCGCTTGGCCTGGCA-TTTTTACA-GAAA-CCCCCTCCATCTTTATAGAAATCATGAACGCAGTTGCGCTTGCG
CCTACGTGCCGAGGGCGGTGCTAGCAAT-CTGGCTATGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATAC--GAGTACTAGTATGTGTGCATCTTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTAATG----ATGGTCCTAATGCATCGGCAAGTGGTCTTGCGAGTT-A-CACTCCACGCACAAATCAACA
-------CACGTTCGTCGGGTTCAAAATTCTGGAAAATGGAAATCCTTTCGCTGCATGGCCGAATGTGTGCAGTAGCAAG
CAACAAGCAGGGAGAGGCAGTGGCCGGCATTGAATCGGGCCATACGAGGACGCAAGCGCGACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2B_1798
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TTAGTCCACAAACTTGCAAAAGGTGATCACCTCATC
CCTAAACTTGCAATGTATGTGAAGATTTAGTTCAAAGCCAATCACAAGTTGACAAATGGCGCCATGCTGGCCGCGTCGTG
GCACACCCAATCGGCGCAGCA-TTTTACAA-AAAA-AACCCTCCACCTTTATAGAAATCATGAACGTTGTTGCGCTTGCG
CCTACGTGCCGAGGGCGGTGCTAGCAAT-CTGGCTAGGATTGGCGGCTGCCATACCTCAAATTCCACCAATAAATATACT
GGTATATATAT--GAGTACTAGTATGCGTGCATATTGATTATAATTGATAAGGTATTGTACGTGTTGAGCCAGCTGAGTT
GATTGCTGACTTGCGGATGCATGGTCCTGATGCATCGGCAAGTGGTCTTGCGAGGTAA-CACTCCACGCACAAATCAACA
-------CACGTCCGCCGGTTTCAAAATTCTGGAAAGTGGAAATCCTTTGGCTGCATGGCCAAATGTGTGCAACAGCAAA
CAGCAAGCAGGGAGCGGCAGTGGCCGGCACTGAATCGGGCCATACGAGGACGCAAGCGCAACTGAGCACA----------
--------------------------------------------------------------------------------
-------------------------------------------------------
>SNPs
-----------------S---------------S----------------SS---S--S------S---------S----
S--------------------------------------------------S----------------------------
------------------------------------S-------------------------------------------
--------------S--------------------------------------------------------------S-S
S----S-SSSSSSSSSSS--------------------------------------------------------------
------------------------------------S-------------------------------------------
------------------------------S-------------------------------------------------
--------------S----------------------------------S-------S----------------------
------------------------------------------------------S----SSS------S--S-S------
--------------------S--------------------------------------------------------S--
-----------------------------------------------S--------------------------------
-------S----------------------S-------------------------------------------------
----------------------------------S---------------------------------------------
-S-------------------------------------S-------------------SSS------------------
--------------------S-----------------------------------------------------------
-------------------S------------------------------------------------------------
-------S---------------------------------------------S--------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------------S---------
-----S----------------------------------------S---------------------------------
-------------------------S------------------------------------------------------
-----S----S----------------------------------SSSSS------------------------------
-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
S-------------S-S--------------------S-----------S------------------------------
---------------S-------S--------S----S---------------------------S--------------
--------------------------------------------------------------------------------
---------------------S-----SS-------------------------------------S-------------
-S----------SS------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------S---------------------------------------------------------
-------------------------S----------------------------------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GATCTGACTGAC
AGCTGCGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGCACTGAATCGGGCCATAC-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
