>input_sequence_78563
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------ATGAGAAAATCAAAGTTTTGC
TCGGGTCCAAGCTTGAGGTACATATTCCTGCTCAACAATTCTAATTTCATAGCAAATATGTTCGAGCCGTCGGTTCCGTT
GGATCTTGAGCTGTGGTCTCTACACCACAGGCTTAAACGTCAATGTGGGAAGTACATTGATAGCTATCTCGATATCTCTT
GGGGACACGTGACTTCCTGCATACCGAAATCATACTTTTCTCGGCCGTTGATCCATCGTTGGAGCAACACCTCCTTGCTG
ATTAATTTTGAGTTAGCATTTCATAAAACTTACCAGACTCAGAAGTTCTGGAAGGTTCCGGAGCCTCGTCTCCGATGCTT
GCTGCGGAAAAATATAGCTGAAAGAGTTGTCTCATGTTACCGCAACTGTTTGGAGGAAAATCCGGAGCTGGAAAAACATG
TGAATAGAGGAACCAGTAGTAGTCCCGAAATTTTGATGGAGATGTTAGGAGAGCTCTTTGAAGGATGA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G540700
TGACGGGGCGGCTTGCAGCCGTGCCAAACGGGACCACCGACGGCGCCACGGCTGCTACCTGCCCACCGCGCTGCATGTAC
CGCGACTGGATCCGGACGGTCGCCGTGTCCGGGGCGCAGATAAGATCCACTCTCTTCTCCAACTCCCACCCTGGTCAGAG
CGGATCCTCCATCGACTCCGGCGCCTCGGATTCTTACCCGTCCAAAAGCTCCGGCCGTTCCTCCGGCTTGGCCGCACCGG
ACTTGGGTGCCCACGAGCTCACGACGATCGCTCGCCAAATGGTCAGCGATGGGTACACCAAGCGTGTTGTTGAGGCGTTC
AGCGCCACATCTCCCGCGCCAGCTCTGGAGAATTGGTTCTCGGAGCTCGACGTGGACTGGATTCTCCAAATCGGCAACGA
GCATGGCTCATGGTGGCAGCTCCAGCTCGGAGACAATTCGGCTTTATCGCTGCG------------------AGATATGG
TCGAGAGGTGGATTCGAGCTCTCACAGTAATCGCCGGCAGTATCGCCGAGCTCGTCTTTGCTCGCCACGAGACCTCCAAA
GTCGCACGGTTTGGCACACTGAGCATCGCCAAGATGCTAGAGTT-CGTCGATGCCATTGTCCCTGCTCCCAAGGCAGAGA
ACCTACGGGCCGTGCTAGACATGTACATTTGTGCCTCCAACGTGTCCTATATGTTTACGCCGCTCGACATGTCTCCGGAA
GCCCAAATCATATTCACCGAGACCGCCAGCTCGTTGGGGACAACAAGAAACAAGTTAAACAATGCCATACTAAGCACGAT
GATGGAGGTGAGAACACTCATGGAGGATGACGATTCATGGGCCATTGAGATTCCACGAGGAGGAGGCGATGTTCATAGGA
ACACTCGGTTCATGGTTGACTACATAGTGTCAATGAGGAAAGCCCGGGCTTCGACGGAGAACTGCGCGCCGAGCGACAAC
ACCGTAAACCTTGGTGACCTGATAGATGCCACATTTGACTATATCTAAGGGATCTGCTTATGAGAAAATCAAAGTTTTGC
TCGGGTCCAAGCTTGAGGTACATATTCCTGCTCAACAATTCTAATTTCATAGCAAATATGTTCGAGCCGTCGGTTCCGTT
GGATCTTGAGCTGTGGTCTCTACACCACAGGCTTAAACGTCAATGTGGGAAGTACATTGATAGCTATCTCGATATCTCTT
GGGGACACGTGACTTCCTGCATACCGAAATCATACTTTTCTCGGCCGTTGATCCATCGTTGGAGCAACACCTCCTTGCTG
ATTAATTTTGAGTTAGCATTTCATAAAACTTACCAGACTCAGAAGTTCTGGAAGGTTCCGGAGCCTCGTCTCCGATGCTT
GCTGCGGAAAAATATAGCTGAAAGAGTTGTCTCATGTTACCGCAACTGTTTGGAGGAAAATCCGGAGCTGGAAAAACATG
TGAATAGAGGAACCAGTAGTAGTCCCGAAATTTTGATGGAGATGTTAGGAGAGCTCTTTGAAGGATGAAGGCAAATTTAA
ATGGCCAGCATCCAACAGTCACCCAACATCATATAAGTGGCCGCTGAATTCATAGATGTATTCTGAATTTTCTGTTCAAG
TGAACTTGTATTCTGAATTTTCTGTTCAAATGAAGTTGTATTCTGATTTCTGAAGTTGGTTGGCCGGTGAAGTTGTATTC
TGTTCAGGGAATTCAGCCGGTGTTGATGTTCCTGGGCACTGAAAGAATGAGAGGC-TAGAAGCGTATGCTGTTCGGCAGG
GACGCATACATGTTATATAGTCATGAC-AGATTACAAGAAG----GCGCAGGTTGTTGC---------------------
-------TAAACTTGACCTCTACTCCAAGCTATACCAAGATAAGATCTATCTAGGTAACAACCTGCCGCAC--CAAA---
-TACATTGTATGCGTTACAAC--ACATACGTGACATGTTGTCACATATTTCAA-TCTATACATTCTCTACAAGCATATCG
TTTAACATCCTTCCTCAATCTTAACATGTCAAGGTTCAGATTGTTCTTGAAGGCTTGGAACTGCCGAACTTGTAGAGGCT
TAGTGAAGCCATCAGCAACTTGATCTCCTGTTGAAATGAACTGTATTTCTAGTAGTTTCTGTGCTACTCTTTCACGAACA
AAATGATAGTCAATTTCTATATGCTTTGTTCTCGCATGAAATACAGGATTTGCAGAAAGATAAGTTGCACCCAGATTGTC
ACACCAAAGTTGTGACACATGTGATCTTCCAATGCCCAATTCATCAAGTAGGGCTTCTATCCACATTACCTCAGCAGTTG
CATTAGCCAGTGACTTGTATTCTGCTTCAGTACTGGAACGTGACACTGTTGTTTGTTTCTTTGCATTCC-AAGATATAAG
ATTAGACCCAAGGAAAACAACAAAACCTCCAGTAGACCTCCTGTCATCTGGGCAACCAGCCCAGTCTGCATCAGAGAATG
CACTTATTGCAGTTGATGAAGATCTACACAATTTTAGCCCTATTCCAGAATTTCCCTGAATATATCTTAATA
>chr2A_342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCTCTGGAGGATTGGTTCTTCGAGCTTGACGTGGACTGGGTTCTTCAAATCCATAGCGA
GCATGGCTTATTTCAGCAGCTTCAGCTCCAAGACAAGTCGCCGGCATGGCTCCGGCCAGCGTCATGGCTCCAAGACTTGG
TCGAGAGATGGATTCGAGCTCTTACCGTAACTGCCTTCAGTGTCCAAGCGATGGTCATCACCGCTCACCAGATGCCGGCG
GTCGCACGGTTTGTCAAAGCGAGCATTGCCAAGATGCTC-ATTT-CGTCGATGTTATTGCCCCTGTTCTTAGGGTGGAGA
ATTTACGGGCCGTGCTAGACATGTTTACTTGTGTCTCCAATGCATCATACATGTTTAAGCCGGTCGTGATCTCTCCGGAA
GCCCAAAGCATATTCAGCGAGATAGGCGGCTCGTTGGAGAGACAAGGAGACAGGCTATATGAGGTCCTATCGAGCATGAT
GGAGGAGGTGAGGACACCCATGGAGGAGGACGACACATGGGCTATTGAGATTCTTCGAGGAGGAGGTGGGGTTCACAGAA
ACACTCGGTTGATGGTAGATTACATCACATCCATGAGGGAAGCATGTGCATCGACGCAGAACTGTGCACCGAGCAACAAC
ACCGTAAACCTTGGTGACCTGATAGATGACACGATCGAGTATCTGGA--GGATCTGCTTCTGAGAAAATCAGAGCTATGC
TCGGATCCAAGCCTGAGGTACATTTTCCTGCTCAACAATTCCCATTTCGTAGCACAGGTTTCTGAGCCATCGGTATCGCT
TTATCTTGAGCAATGGTCTGAACTTAAC---CTTACACCTGAATGTAAGAAGTTGATGGATAGCTATCTTGATGTTTCTT
GGGGACATGTCCTATCCTGCATACCCAAATCGAGATTTCCTGGACCC---ATCCATTGTTGGATCAACACCTCTTCCCTA
ACCAAATTTGAATCGGCTTTTCGAAAAACTTACCAGGCTCAGAAGTTCTGGAAGGTCCAGGACCCTCAGCTCAGAGATCT
GCTGCGGAGAGCTATTGCGGAGAGAGTCATTCCAGGTTACCGCGACTTCCTGGAAGAGCATCCAGAGCTAGAGAAACACA
TTGGCCGCGGAAGCAGCAGTCCTGAGG---TTTTCAAGAAGATGTTGGGAGAGCTATTTGAAGGATGAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr2D_342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCTCTGGAGGATTGGTTCTTCGAGCTTGACGTGGACTGGGTTCTTCAAATCCATAGCGA
GCATGGCTTATTTCAGCAGCTTCAGCTCCAAGACAAGTCGCCGGCATGGCTCCGGCCGGCGTCATGGCTCCAAGACTTGG
TCGAGAGATGGATTCGAGCTCTTACCGTAACTGCCTTCAGTGTCCAAGCGATGGTCATCACCGCTCACCAGATGCCGGCG
GTCGCACGGTTTGTCAAAGCGAGCATTGCCAAGATGCTC-ATTTTCGTCGATGTTATTGCCCGTGTTCTTAGGGTGGAGA
ATTTACGGGCCGTGCTAGACATGTTTGCTTGTGTCTCCAATGCATCATACATGTTTACGCCGGTCGTGATCTCTCCGGAA
GCCCAAAGCATATTCAGCGAGATAGGCGGCTCGTTGGAGAGACAAGGAGACAGGCTATATGAGGTCCTATCGAGCATGAT
GGAGGAGGTGAGGACACCCATGGAGGAGGACGACACATGGGCTATTGAGATTCTTCGAGGAGGAGGTGGGGTTCACAGAA
ACACTCGGTTGATGGTAGATTACATCACATCCATGAGGGAAGCATGTGCATCGACGCAGAACTGTGCACCCAGCAACAAC
ACCGTAAACCTTGGTGACCTGATAGATGACACGATCGAGTATCTGGA--GGATCTGCTTCTGAGAAAATCAGAGCTATGC
TCGGATCCAAGCCTGAGGTACATTTTCCTGCTCAACAATTCCCATTTCGTAGCACAGGTTTCTGAGCCATCGGTATCGCT
TTATCTTGAGCAACGGTCTGAACTTAAC---CTTACACCTGAATGTAAGAAGTTCATGGATAGCTATCTTGATGTTTCTT
GGGGACATGTCCTATCCTGCATACCCAAATCGAGATTTCCTGGACCA---ATCCACTGTTGGATTAACACCTCTTCACTA
GCCAAATTCGAGTCAGCATTTCAAAAAACTTACCGGGCTCAGAAGTTCTGGAAGGTTCCGGACCCTCGGCTGAGAGATGT
GCTGCGGAGAGCTATCGCCGAGAGAGTCATTTCAGGTTACGGCGACTACCTGGAAGAGCATCCAGAGCTAGAGAAACACA
TTGGCCGCGAAAGCAGCAGTCCTGAGG---TTTTCAAGAAGATGTTGGGAGAGCTATTTGAAGGATGAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7B_1693
CTGGGCTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAATTAGAGGC-TAGAAGCGTATGCTGTTCGGCAGG
GATGCATGTATGTTATATAGTCACGAC-AGATTACAAGATG----GCGCAGGTTGTTGC---------------------
-------TAAACTTGACCTCTACTCCAAGCTATACCAGGACAAGATCTATCTAACTAACAACC----GCAC--CAGA---
-TACATCATATACGGTACAAC--TCATGCGTGACATGTCATCACGTATTTCTA-CCTAGACATGCTCTACAAGCCTATCA
TCTAACATCCTCCCTCAATCTCAACATGTTAAGGTTCAGATTGTTCTTGAAGGCTTGGAACTGCCGAACTTGTAGAGGCT
TAGTAAAGCCATCAGCAACTTGATCTCCTGTTGGGATGAACTGTATTTCAAGTAGTTTCTGTGCTACTCTTTCACGAACA
AAATGATAGTCAATTTCTATATGCTTTGTTCTTGCATGAAATACAGGATTTGTAGACAGATAAGTTGCCCCCAGATTGTC
ACACCAAAGTTGTGACACATGTGATCTTCCAACACCCAATTCATCAAGTAGGGTTTCTAACCACATTACCTCAGCAGTTG
CATTGGCCAGTGACTTGTATTCTGCTTTAATACTAGAACGTGACACTGTTGCTTGTTTCTTTGCATTCCCAAGATATGAG
ATTAGATCCAAGGAAAACAGCAAAACCTCCAGTAGACCTCCTATCATCTGGGCAACCAGCCCAGTCTGCATCAGAGAATG
CACTTATTGCAGTTGATGGAGATCTACACAATTTTAGCCCTATTCCAGAACTTCCTTGAATATATCTTAATA
>chr2A_1700
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CTGAAAGAATAAGAGAC-TAGAAGCGTATGCTGTTCGGGAGG
GACGCATACATGTTATATAGTCAT-AC-AGATTACAAGATG----GCGCAGGTTGTCAC---------------------
-------TAAACTTGACCTCTACTCCAAGCTATATCAGGATAAGATCTATCTAGCTAACAACCTGCGGAAC--CAGA---
TTACATCGTATGCGTTACAAC--ACATACGTGACATGTTGTCACATATTTCTA-CCTATACATTCTCTACAAGCCTATTG
TTTAACATCCTCCCTCAATCGTAACATGTCAAGGTTCAGATTGTTCTTGAAGGCTTGGAACTGCCAAACTTGCTGAGGCT
TAGTAAAGCCATCAGCAACTTGATCTCCTGTTGGAATGAACTGTATTTCTAGTAGCTTCTGTGCTACTCTTTCTCGAACA
AAATGATAGTCAATTTCTATATGCTTTGTTCTTGCATGAAATACAGGATTTGCAGAAAGATAAGTTGCACCCAGATTGTC
GCACCAATGTTGTGACACACGTGATCTTCCAACACCCAATTCATCAAGTAGGGTTTCTATCCACATTACCTCAGTAGTCG
CATTAGCCA--GACTTATATTCAGCTTCAGTACTGGAACGTGACACCGTTGCTTGTTTCTTTGCATTCC-AAGATATAAG
ATTAGATCCAATGAAAACAGCAAAACCTCCAGTAGACCTCCTGTCATCCGGACAACCAGCCCAGTCTGCATCAAAGAATG
CACTTATTGCAGTTGATGGAGATCTACACAATTTTAGCCCTATTCCAGAACTTCCCTGAATATATCTTAATA
>chr3B_1700
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CTGAGACAATGAGAGGC-TAGAAGCGTATGATGTTCGGCAGG
GACGCATGCATGTTATATAGTCATGAC-AGATTACAAGAAG----GCGCAGGTTTTTGCTACAATAAGGCGCAGGTTGTT
GCTAAATTAAACTTGACCTCTACTCCAAGCTATACCAAGATAAGATCTATCTAGCTAACAACCTGCGGCGC--CAAA---
-TACATTGTATGCATTACAAC--ACATACGTGACATGTTGTCACGTATTTCTA-TCTATACATTCTCTACAAACCTGTCG
TTTAACATACTCCCTCAATCTTAACATGTCAAGGTTCAGATTGTTCTTGAAGGCTTGGAACTGTCAAACTTGTAGAGGCT
TAGTGAAGCCATCAGCAACTTGATCTTCTGTTGGAATGAACTATATTTCTAGTAGTTTTTGTGCTACTCTTTCACGAACA
AAATGATAGTCAATTTCTATATGCTTTGTTCTTGCATGAAATACATGATTTGCAAAAAGATAAGTTGCACCCAGAGTGTC
ACACCAAAGTTGTGACACATGTGATCTTCCAATGCCCAATTCATCAAGTAGGGTTTCTATCCACATTACCTCAGCAGTTG
CATTAGCCAGTGACTCGTATTCTGCCTCAGTACTGGAATGTGACACTGTTGCTTGTTTCTTTGCATTCC-AAGATATAAG
ATTAGACCCAAGAAAAACAACAAAACCTCCAGTAGACCTCCTGTCATCTGGGCAACCAACCCAGTCTGCATCAAAAAATG
CACTTATTGCAGTTGATGGAGATCTACACAATTTTAGCCCTATTCCAGAACTTCCCTAAATATATCTTAATA
>chr2A_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAAAGAGAACTGTGGAAGCGTATGTTGTTCGGCAGG
GACGCGTACATGTTATATAGAGATACC-AGATTACAAGATGAGGCGCGCAGGTTGTTAC---------------------
-------TAGACTTGGCCTCTACTCCAAGCTATACAAAGATAAAACTATCCTAGCTAACAACCTGCTGCCC--AAGA---
TTACATGTAT----GTATACA--CAATACGTGACAACATTTCACAAAATACTAGCATATACAATTTCTACAAGCCTATCA
TTTAAAATCCTCCCTCAATCTTAACTCATCAAGGTTTAGATTGTTCTTGAAGGCTTGAAACTGTCGAACTTGTAGAGGCT
TAGTGAAACCATCAGCAACTTGATCTCCTATTGGAATGAACTGTATTTCTAATAGCTTTTGTGCTACTCCTTCACGAACA
AAGTGATAATCAATTTATATATGCTTTGTTCTGGCATGAAATACAGGATTTGCAGAGAGATATGTTGCACCCAAGTTGTC
ACACCACGGTTGTGACACATGTGATCTTCCAATCCCTAGTTCATTAAGTAGAGTTTCAATCCACATTACCTCAGCAGTTG
CATTTGCCAGAGACTTATATTCTGCTTCAGTACTAGAACGTGAAACTGTTGCTTGTTTACTAGCATTCC-AAGATATAAG
ATTAGACCCAAGAAAAATAGCAAAACCTCCAGTGGATCTCCTATCATCTGGACACCCAGCCCAATCTGCATCAGAGAATG
CACTTATTCCAGTTGATGGAGACCTACATAGCTTAAGTCCTATTCCAGTACTTCCTTGAATATACCTTAGTA
>chr5A_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAATAAGAGAC-TGGAAGCGTATGCTGTTCGGCAGG
GATGCATACATGTTATATAGTCAT-AC-AGATTACAAGATG----ACGCAGGTTGTTGC---------------------
-------TAAACTTGACCTCTACTCCAAGCTATACCAGGATAAGATCTATCTAGCTAACAACCTGCTGAAC--CAGA---
TTACATTGTATGCGTTACAAC--ACATACGTGACATGTTGTCATGTATTTCTA-CCTATACATTCTCTACAAGCCTATCG
TTTAACATCCTCCCTCAATCTTAACATGTCAAGGTTCAGATTGTTCTTGAAGGCTTGGAACTGCCGAACTTGTAGAGGCT
TAGTAAAGCCATCAGCAACTTGATCTCCTGTTGGAATGAATTGTATTTCTAGTAGTTTCTGTGCTACTCTTTCTCGAACA
AAATGATAGTCAATTTCTATATGCTTTGTTCTTGCATGAAATACAGAATTTGCAGAAAGATAAGTTTCACCCAGATTGTC
ACACCAAAGTTGTG---CATGTGATCTTCCAACACCCAACTCATCAAGTAGGGTTTCTATCCACATTACCTCAGTAGTCG
CATTAGCCAGTGACTTGTATTCAGCTTCAGTACTGGAACGTGACACTGTTACTTGTTTCTTTGCATTCC-AAGATATAAG
ATTAGATCCAAGGAAAATAGCAAAACCTCCAGGAGACCTCCTGTCATCTGGACAACCAGCCCAGTCTACATCAGAGAATG
CACTTATTGCAGTTGATGGAGATCTACACAATTTTAGCCCTATTCCAGAACTTCCCTGAATATATCTTAATA
>chr5D_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAATGAGAGGT-GAGAAGCGTATGCTGTTCGGCAGG
GACGCATTCATGTTATATAGTCATGAC-AGATTACAATGAG----GCCCAGGTTGTTGC---------------------
-------TAAACTTGACCTCTACTCCAAACTATACCCAGATAAGATCTATCTAGCTAACAACCTGCCGCAC--CAGA---
TACA--TGTATGCGTTACAATATACATACGTGACAACATGTCACGTATTTCTATCCTATACATTCTCTACAAGCCTATCG
TTTAACATCCTCCCTCAATCTTAACATGTCAATGTTCAGATTGTTCTTGAAGGCTTGGAACTGTCGAATTTGTAAAGGCT
TAGTGAAGCCATCAGCAACTTGATCTCCTGTTGGAATGAACTGTATTTCTAGCGGTTTCTGTGCTACTCTTTCACGAACA
AAGTGATAGTCAATCTCTATATGTCTTGTTCTTGCATGAAATACATGATTTGCAGAAAGATAAGTTGCTCCTAGATTGTC
ACACCAAAGTTGTGACACATGTGATCTCCCAATGCCCAATTCATCAAGTAGGGTTTCTATCCACATTACCTCAGCAGTTG
CATTTGCCATAGATTTGTATTCTGCTTCAGTACTGGAACGTGACACTGTTGCTTGTTTCTTTGCATTCC-AAGATATAAG
ATTAGACCCAAGGAAAACAGCAAAACCTCCAGTAGATCTCCTGTCATCTGGGCAACCAACCCAGTCTGCATCAGAGAATG
CACTTATTGCAGTTGACGGAGACCTACACAACTTAAGCCCTATTCCAGTACTTCCCTGAATATATCTTAATA
>chr2B_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAAAGAGAATTGTGGAAGCGTATGCTGTTCGGCAGG
GACGCGTTCGTGTTATATAGAGACATC-AGATTACAAGATAGGTTGCGCAGGTTGTTAC---------------------
-------TAGACTTGGCCTCTACTCCAAGCTATACAAAGATAAACCTATCCTAGCTAACAACCTGCCGCAC--CCAAGAT
TACA--TGTACGAGTACGTAC--CAATACGTGACAACATGTCACAAAATACTAGCCTATACATTTCCTACAAGCCTATCA
TTTAACATCCTCCCTCAATCTTAACTCATCAAGGTTTAGATTGTTCTTGAAGGCTTGAAACTGTCGAATTTGTAAAGGCT
TGGTGAAACCATCAACAACTTGATCTCCTGTTGGAATGAACTGTATCTCTAATAGCTTATGTGCTACTCTTTCACGAACA
AAGTGATAGTCAATTTCTATATGCTTTGTTCTGGCATGAAATACATGATTTGCAGAGAGATATGTTGCACCCAAGTTGTC
ACACCACAGTTGTGACACATGTGATCTTCTGATTCCTAGTTCATTAAGTAAAGTTTCAATCCACATTACCTCAGCAGTTG
CATTTGCCAGAGACTTATATTCTGCTTCAGTACTGGAACGTGATACTGTTGCTTGTTTCTTAGCAGTCC-AAGATATAAG
ATTAGACCCAAGAAAAATAGCAAAACCTCCAGTAGACCTTCTATCATCTGGACACCCTGCCCAATCCGCATCAGAGAATG
CGCTTATTCCAGTTGATGGAGATCTACATAACTTGAGCCCTATTCCAGTACTTCCTTGAATATACCTTA---
>chr4A_1701
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGAAAGAAAGAGCATTGTGGAAGCGTATGCTGTTCGGCAGG
GACGCGTTCGTGTTATATAGAGATGTC-AAGATACAAGATAGGTAGCGCAGGTTGTTAC---------------------
-------TAGGCTTGGCCTCTACTCCAAGCTATACAAAGATAAACCTATCCTAGCTAACAACCTGCCGCATACCCAAGAT
TACG--TGTACGCATACATA-----ATACATGACAACATGTCACAAAATACTAGCCTATACATTTTCTACAAGCCTATCA
TTTAACATCCTCCCTCAATCTTAACTCATCAAGGTTTAGATTGTTCTTGAAGGCCTGAAACTGTCGAATTTGTAAAGGCT
TGGTGAAACCATCAGCAACTTGATCTCCTGTTGGAATGAACTGTATCTCTAATAGCTTTTGTGCTACTCTTTCACGAACA
AAGTGATAGTCAATTTCTATATGCTTTGTTCTGGCATGAAATACAGGATTTGCAGAGAGATATGTTGCACCCAAGTTGTC
ACACCACAGTTGTGACACATGTGATCTTCCAATTCCTAGTTCATTAAGTAAAGTTTCAATCCACATTACCTCAGCAGTTG
CATTTGCCAGAGACTTATATTCTGCTTCAGTACTGGAACGTGATACTGTTGCTTGTTTCTTAGCAGTCC-AAGATATAAG
ATTAGACCCAAGAAAAATAGAAAAACCTTCAGTAGACATTCTATCATCTAGACACCCAGCCCAATCCGCATCAGAGAATG
CACTTATTCCAGTTGATGGAGATCTACATAACTTGAGCCCTATTCCGGTACTTCCTTGAATATACCTTA---
>chr2A_1719
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GAAGCGTATGCTGTTCGGCAGG
GACGCGTTCGTGTTATATAGAGATGTCAAGATTACAAGATAGGTTGCGCAGGTTGTTAC---------------------
-------TAGGCTTGGCCTCTACTCCAAGCTATACAAAGATAAACCTATCCTAGCTAACAACCTGCCGCACACCCAAGAT
TACA--TGTACGTGTACATA-----ATACGTGACAACATGTCACAAAATACTAGCCTATACATTTTCTACAAGCCTATCA
TTTAACATCCTCTCTCAATCTTAACTCACCAAGGTTTAGATTGTTCTTGAAGGCTTGAAACTGTCGAATTTGTAAAGGCT
TGGTGAAACCATCAGCAACTTGATCTCCTGTTGGAATGAACTGTATCTCTAATAGCTTCTGTGCTACTCTTTCACGAAAA
AAGTGATAGTCAATTTCTATATGCTTTGTTCTGGCATGAAATACAGGATTTGCAGAGAGATATGTTGCACCCAAGTTGTC
ACACCACAATTGTGACACATGTGATCTTCCGGTTCCTAGTTCATTAAGTAAAGTTTCAATTCACATTACCTCAGCAGTTG
CATTTTCCAGAGACTTATATTCTGCTTCAGTACTGGAATGTGATACTGTTGCTTGTTTCTTAGCAGTCC-AAGATATAAG
ATTAGACCCAAGAAAAATAGCAAAACCTCCAGTAGACCTTCTATCATCTGGACACCCAGCCCAATCCGCATCAGAGAATG
CACTTATTCCAGTTGATGGAGATCTACATAACTTGAGCCCTATTCCAGTACTTCCTTGAATATACCTTA---
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS---------S---------SS-----S------------S----S------SSS-S---
--------S--SSSS------S------SS------S---S-SSS--S---S-----------------------SS---
-------S--------------S--S----SS---SS----S--SSS-S-S-S---S-SS-SSSS---S---SSS-SSSS
-------------S--S-SS------S-----------SS-S-----------SS----S-----S--SS-S--SS----
-SS---------------------SS-S-----S------S-SS--S--S------------S---SS--S---------
-------S--------S-----SS-S-S---------S--S-SS-S--S---S-S--S-SS-S-S-S--SSS----S---
-SS---------S----S---------S-----SS-------S----------SS-----------S-SS-----S--S-
----------S-----S--S-----SSSS--S------S----SS-S--S------S-------S--S------S-----
----------------------------S---SS-S--S---S-SS-SS----------S-----------S--S-S---
----S-------S----------S-----------------SS-----S-----S-SS-S-SS-----S-----SS--S-
SS---------SS------SS--SSS--SSS----S--S-S-----SS-----S---S-----------S---S-S----
-------S--SSSS-----------S-----SSSS---S--S-S--SSSS------S------S---------S-SS--S
-SS--S-------S---------S------------S-------------------------S-----S---S--SSSS-
--------S-SS---S--S--S-----SS-S---S--------S---SSS----S--SS----S-----S--S-----SS
-SSSSS-S----S---S---SS-SSS-SSS----S-S-S-------S--------S-------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
---------------------------------------------------S----------------------S-----
-----------S--------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------S-----------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------S---------------------
>forward_315
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CACCAAGCGTGTTGTTGAGG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1208
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGTGACTTCCTGCATACCGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_525
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AGTAATCGCCGGCAGTATCG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CAGCATCCAACAGTCACCCA-------------------------------------------------------
--------------------------------------------------------------------------------
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