>input_sequence_78561
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---------------------------------------------ATGAACACTTCTAGGAAATCAACGAAATCTGGTTT
GTTGGAAAAGCAACAATTTGTTTGCAACAAATTCCGAAAACCCAAAGTTGATGACGGAGGTGCAGAAACTGCCCCAATCC
TAGATGTGATTGAAGATTTTAATGGAGATGCCGATGAAGGTGAGGATGATGAGATTGTCTTCCTTGATGATGAGTGTAAA
AAG-AAGAAGAAATCTAAGAGAAGAAAGCGAGACACAATAGTCCAAACAGGGTGCAGAGCAAGAATGGTTGTGAAGCTAA
TGGACAGTCGGTG-GGAGGTGATTTTCTTTGTTCGTGAACACAATCATGCATTGGTTGACAAACCATCACTAACTAAGTA
CCTCCGATCACATCAAGGGATTCCTCCGGAAGAAAAACTATTCCTGAAGAATCTTCATAACTGTAATTTGACCACAGGTC
TGTGTCCACATTCAACCCAAAAAAAACTCTGTTTTCTTGTGGGAATTTTTTCATAA------------------------
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--------------------------------------------
>chr2A_1_TraesCS2A01G315200
AAAATGAGATGTTTGCTTCTGTATATTTACACACAAAAAATGCAAAAAGAGAAAGTGGTAGTAATTTGCTGATCCTTTGC
AAAATTAGTAGACATTAGGCAAGTAAACATGTATACACTAGTGGTAGTAGAGGTTTTTGCAAACTGAAACATGATGTGAC
AACACGAGATACGTCAAAACACATGAGTCTGAGTTGCGTATCACAGATGTAACGCACTACACATTGTTGTTTAGAGAAAA
AAAATAGAAAAAAATCCACAGTTCATCTACTCCTTGATAAAATCCACATTGGCCTGGAGATTCTTTTTTGCAGCTGTAGC
TTGAGCACGGAGTGAAGAATTCAGAAAAACATGTCTTTA-CTTCTTCTCAATTCCTGTTAAAGAACAAGGATAAAAATCA
AAAACTCATAGAACAGACACAAAAAATGAAGATAAAAATGAAATTCAAGGAAACTAAAGC-AACCCCGAAAAAATGACCA
TTTCGAGTGTTTTCGTAGATTGGTGTCACACATTTTTGCATCTAGAGTTGCCTTTCATTTTTTGTTCTTATTTTCCCTGG
AAATCAGTGTCATTGTTGTTTCTTTTCTCCCCAGGTTTGAAAGATGATTGACTTAAACGAATTGCCTGATGACACTA---
ATTCTGAAATGCGTTTTACGGGTGGCATTGGAGTTGAAGACCCCATGTACTGTATGCAGTCTGTTGCCCAGCCCCCTGCT
AGAGAATACAATGAAGTTGTAGGAGAATCTCCTAATCCCATGAGCACTCAGTAAGCTCCTGCTGCACCTGAAGAAGCTAT
GCAGACAGAAGGTGATACTTTTGATGACACCACCACAAATGGAGAAACAGGTGGAACTATTGGACAGGGAGTTGTGAGAA
ATGACAATGATGATGAAGCTTGGTCACAACCAAAAGAGCCTTTCATAGGAATGAGGTTGGATACTCTCGAGGGTGCAAAA
GAAAATTATAATGCCTATGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAATCAACGAAATCTGGTTT
GTTGGAAAAGCAACAATTTGTTTGCAACAAATTCCGAAAACCCAAAGTTGATGACGGAGGTGCAGAAACTGCCCCAATCC
TAGATGTGATTGAAGATTTTAATGGAGATGCCGATGAAGGTGAGGATGATGAGATTGTCTTCCTTGATGATGAGTGTAAA
AAG-AAGAAGAAATCTAAGAGAAGAAAGCGAGACACAATAGTCCAAACAGGGTGCAGAGCAAGAATGGTTGTGAAGCTAA
TGGACAGTCGGTG-GGAGGTGATTTTCTTTGTTCGTGAACACAATCATGCATTGGTTGACAAACCATCACTAACTAAGTA
CCTCCGATCACATCAAGGGATTCCTCCGGAAGAAAAACTATTCCTGAAGAATCTTCATAACTGTAATTTGACCACAGGTC
TGTGTCCACATTCAACCCAAAAAAAACTCTGTTTTCTTGTGGGAATTTTTTCATAAAGTTGCCTGTTATTATTTTGCAAG
TTGCTTGTACTTAGTTCTTGTTTTTGCCAACTAATCTGGTATCATAGGGGAAACCTTTTGTGGTTTCTACAGAATTGCTT
GCAATTAAGTAGGCAAGCTTTGT-GGTCCTCTGGAAAAATAATTTGCACGGAGTTGCCTTTTGGCTCA--TGCAAGTTGC
TTGTTCTGC-TTAAGCAAGTTGCTTGTTCAGAAAAGGATG-GCA-ACTT-CTGCGTCCTTGATGCACATAAGTTGCCC-C
ACCACGCAAAAAATAAGTTCATCTTTCTCTGGG---AAAACAAATCGATTCATTGTGTGCCAGGGGGGT--ATGACTTGC
CTGTATCTATGGAAACTATATGAGTTAGAAAAGAAAAAGATGGGCAACTTCTGTGTCCTTGATGCACATAAGTTGCCCTC
ACCACGCA------------------------------------------------------------------------
-----------------------------------------------------------------------------AAA
TATAGTCGAGCTTCTGTGGAAAAAAGAAAATCGATTCATTGG--------------------TTTGTG--TTGGTTTGCT
GTTGTTCTGTTTTCCAGTAACTG-TGTTGCTTGTTTTCTTTCATATCCTAACTATGTTTCTGCATGCG---ATTTGTGCA
GGTCGTATGATGCAAATTATGTCTGAATTTTATGGGACGGAACTAATTGTTCCTTATACAACTAAAGCAATATCAAATCT
TAAATTGAGCTTGAACAAGGCAGCTACTGGTGAAGGAGATATGATAGAGACAGTAGCCTACTTCAAGGAGCAAGAGAAAA
TAGATCCTGATTTTTTTCTACAAGGTCAAGTATGATGAGGAGGACAGGGTTATGAACATTTTCTGGGTTGATGGACCAGC
ACGGAAGGCGTACGCTGAGGCTTATCATGATTGCATTTCCTTCGACACGACATACATGACAAACATGTACAACATGCCTT
TTGCACCGTTCATTGGTATCAACCGGCACGGGCAGTCATTCATGTTGGGGTGTGGATTTGTTAGGCAAGAATTGGAGACG
GGCTTTGATTGGTTGTTTGGGAGTTTCCTTGAAGCAATGCATGG
>chr2A_1
AAAATGAGATGTTTGCTTCTGTATATTTACACACAAAAA-TGCAAAAAGAGAAAGTGGTAGTAATTTGCTGATCCTTTGC
AAAGTTAGTAGATATTAGGCAAGTAAACAGGTATACACTAGTGGTAGTAGAGGTTTTTGCAAACTGAAACATGATGTGAC
AACACGAGATACGTCAAAACACATGAGTCTGAGTTGCGTATCACATATGTAACGCACTACACATTGCTGTTTAGAGAAAA
AAATAG--AAAAAATCCACAGTTCATCTACTCCTTGATAAAATCCACATTGGCCTGGAGATTCTTTTTTGCAGCTGTAGC
TTGAGCACGGAGTGAAGAATTCAGAAAAACATGTCTTTA-CTTCTTCTCAATTCCTGTTAAAGAACAAGGATAAAAATCA
AAAACTCATAGAACAGACACAAAAAATGAAGATAAAAATGAAATTCAAGGAAACTAAAGCAAACCCCGAAAAAATGACCA
TTTCAAGTGTTTTCGTAGATTGGTGTCACACGTTTTTGCATCTAGAGTTGCCTTTCATTTTTTGTTCTTATTTTCCCTGG
AAATCAGTGTCATTGATGTTTCTTTTCTCCTCAGGTTTGAAAGATGATTGACTTAAACGAATTGCTTGATGACACTA---
ATTCTGAAATGCGTTTTACGGGTGGTATTGGAGTTGAAGACCCCGTGTATTGTACGCAGCCTGTTGCCCAGCCCCCTGGT
GGAGA--ACACAGAAGTTGTAGGAGAATATCCTAATCCCATGAGCACTCAGCAAGCTCCTGCTGCACCTGAAGAAGCTAT
GCAGACAGAAGGTGATACTTTTGATGACACCACCACAATTGGAGAGACAGGTGGAACTATTGGACAGGGAGTTGTGGGAA
ATGACAATGATGATTAAGCTTGGTCACAATCAAAAGAGCCTTTCATAGGAATGAGGTTTGATACTCTCGAGGGTGCAAAA
GAACACTATAATGCCTATGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAATCAACGAAATCTGGTTT
GTTGGAAAAGCAACAATTTGTTTGCAACAAATTCCGAAAACCCAAAGTTGATGACGGAGGTGCAAAAACTGCCCCAGTCC
TAGATGTGATTGAAGATTTTAATGGAGATGCCGATGAAGGTGAGGATGATGAGATTGTCTTCCTTGATGATGAGTGTAAA
AAG-AAGAAGAAATCTAAGAGAAGAAAGCGAGACACAATAGTCCAAACAGGGTGCAGAGCAAGAATGGTTGTGAAGTTAA
TGGACAGTCGGTG-GGAGGTGATTTTCTTTGTTCGTGAACACAATCATGCATTGGTTGACAAACCATCACTAACTAAGTA
CCTCCTATCACATCAAGGGATTCCTCCAGAAGAAAAACTATTCCTGAAGAATCTTCATAACTGTAATTTGACCAAAGGTC
CGTGTCCACATTCTACCC-AAAAAAACTCTGTTTTCTTGTGGGAATTTTTTCATAAAGTTGCCTGTTATTATTTTGCAAG
TTGCTTGTACTTAGTTCTTGTTTTTGCCAACTAATCTGGTATCACAGGGGAAACCTTTTGTGGTTTCTACAGAATTGCTT
GCAATTAAGTAGGCAAGCTTTGT-GGTCCTCTGAAAAAATAATTTGCACGGAGTTGCCTTTTGGCTCA--TGCAAGTTGC
TTGTTCTGC-TTAAGCAAGTTGCTTGTTCAGAAAAGGATG-GCA-ACTT-CTGCGTCCTTGATGCACATAAGTTGCTC-C
ACCACGCAAAAAATAAGTTCAGCTTTCTCTGGG---AAAACAAATCGATTCATTGTGTGCCAGGGGGGT--ATGACTTGC
CTGTATCTATGGAAACTATATGAGTTAGAAAAGAAAAAGATGGGCAACTTCTGTGTCCTTGATGCACATAAGTTGCCCCC
ACCATGCA------------------------------------------------------------------------
-----------------------------------------------------------------------------AAA
TATAGTCGAGCTTCTGTGGAAAAAAGAAAATTGATTCATTGG--------------------TTTGTG--TTGGTTTGCT
GTTGTTCTGTTTTCCAATAACTG-TGTTGCTTGTTTTCTTTCATATCCTAACTATGTTTCTGCATGCG---ATTTGTGCA
GGTCGTATGATGTAAATTATGTCTGAATTTTATGGGACAGAACTAATTGTTCCTTATACAACTAAAGCAATATCAAATCT
TAAATCGAGCTTGAACAAGGCAGCTACTAGTGAGGGAGATATGATAGAGACAGTAGCCTACTTCAAGGAGCAAGAGAAAA
CAGATCCTGA-TTTTTTCTACAAGGTCAAGTATGATGAGGAGGACAGGGTTATGAACATTTTCTGGGTTGATGGACCAGC
ACGGAAGGCGTACGCTGAGGCTTATCATGATTGCATTTCCTTCGACACGACATACATGACAAACATGTACAACATGCCTT
TTGCACCGTTCATTGGTATCAACCGGCACGGGCAGTCATTCATGTTGGGGTGTGGATTTGTCAGGCAAGAATTGGAGACG
AGATTTGATTGGTTGTTTGGGAGTTTCCTTGAAGCAATGCATGG
>chr3B_333
--------------------------------------------------------------------------------
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------------TGAAGAATCGTAAGC--CATGTCTTTCGCTTTTTCGCATTTCCTGATAAAGAACAAAGGATAAAAACA
GAAAAACATTAAAAAGAGCCACTGTTGGAGAATG--AAGGGCATTGAAAGATACTAATGC-AAGACAGAAAATGAACATT
CATTATTTTCATGAAATCTGTATTGAACA-----TTTGCTTCTAGAGTTGCCTTCA--TTTATGCTATTAGTTGCCTGGA
AAATCATTATTTGA-TTTTTTGTCAAACAGATTTGC------GATGATTGACTTAAACGAATTGCCTGGTGATGATGGTC
ACTCTGAAGTGCGTTTTACGAGTGGGATTGGAGTTGAAGACCCCATGTACTGCATGCAGCCTAATGCCCCACAACCTGGT
GGAGTCTACAATGAGGTTATAGGGGAATCACCTAATCCCATGAGTAACCAACATGCTCCTGTTGCGCCTGAAGAAGCTAT
GCAGATAGAAGGCGACACTTTTGATGACACAACAACGTTTGGTGAAACAGGTGGAACTATTGGACAAGGAGTTGTGGTAA
ATGATAATGACGATGAAGCTTGGTCCCAACCATGAGAGCCTTTCATAGGCATGAGGTTTAATACTCTTGAGTGTGCTCAG
GAACACTACAATGCCTACGCTCTCTGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAAAACACAAAAACTGGAAA
GTTGGAGAAGCAACAATTTGTTTGCAACAAGTTCCTAAAACCAAAAGTTGATGATGGAGGTGCGGAAACTGTCCCTGCCC
TAGATGTGATTGAGGACACTAATGGAGATGCAGAAGATGGTGCGAACAATGAGATTGTCTTCCTTGATGATGAGTGCAGG
AA-AAAGAAGAAGTCCAAGAAAAGAAAGCAAGATACAATAGTGCAGACAGGGTGCAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTCAGTG-GGAGGTGGTTTTCTTTATTGCTGAACACAATCATGCATTGGTTGATAAGCCATCACTAACTAAGTA
CCTTCGATCACACCAAGGGATCCCTCCAGAAGAGAAACTGTTCCTGGAAAATCTTCATAATTGTAATTTGACCAC-----
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--------------------------------------------
>chr4B_513
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----------------------------------TTTGCTTCTAGAGTTGCCTTCA--TTTTTGTTATTAGTTGCCTGAA
AAATCATTATTTGC-TTTTTTGTCAAATAGGTTGGT------GATGATTGACTTAAATGAATTTCCTGATGATGATGGTC
ACTCTGAAGTGCGTTTTACTGGTGGGGTTGGAGTTGAAGACCCCATGTACTGCATGCAGCCTAATGCCCCACAACCTGAT
GGAGGCTACAATGAGGTTGTAGGGGAATCACCTAATCCCATGAGTACCCAACATGCTCCTGTTGCGCCTGAAGAAGCTAT
GCAGACGGAAGACGAAACTTTTGATGACACAACAACGTTTGTTGAAACAGGTGGAACTATTGGACAAGGGATTGTGAGAA
ATGATAATGACAATGAAGCTTGGTATCAACCAAGAGAGCCTTTCATAGGCATGAGGTTTGATACTCTCGAGTGTGCTCAA
GAACACTACAATGCCTACGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAATCCACAATTACTGGTCT
GTTGGAGAAGCAACAATTTGTTTGCAACAAGTTCCAAAAAACAAAAGTTGATGACGGAGGTGCGGAAACTATCCCTGCCC
TAGATGTGATTGAAGATATTAATACAAATGCAGAAGATGGTGCGGATGATGAGATTGTCTTCCTTGATGATGAGTGCAGA
AA-AAAAGAGAAGTCCAAGAAAATAAAGCGGGATACAATAGTGCAGACAGGGTGTAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTTGGTG-GGAGGTGGTTTACTTTATTGCTGAACACAATCATGCATTGGTTGATAAGCCATCACTAACTAAGTA
CTTTCGATCACACCAAGGGATCCCTCCAGAAGAGAAGCTATTCCTGAAAAATCTTCATAATTGTAATTTGACCACAGGTG
TGTG----------------------------------------------------------------------------
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--------------------------------------------
>chr5D_513
--------------------------------------------------------------------------------
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----------------------------------TTTACTTCTAGAGTTGCCTTCA--TTTTTGTTATTAGTTGCCTGGA
AAATCATTATTTGC-TTTTTTATCAAACAGGTTGGC------GATGATTGACTTAAAGGAATTGCCTGATGATGGTGGTC
ACTCTGAAGTGCATTTAACGGGTGGGATTGGAGTTGAAGACCCCATGTACTGCACGCAGCCTAATGCCCCACAACCTGGT
AGAGTCTACAATGAGGTTGTAGGGGAATCGCCTAATCCCATGAGTACCCAACATGCTCCTGTTGCGCCTGAAGAAGCTAT
GCAGACAGAAGGCGACAGTTTTGATGACATAACAACGTTTGCTAAAACAGGTGGAACTATTGGACAATGGGTTGTGGGAA
ATGATAATGACGATGAAGCTTGGTCCCAACCAAGAGAGCCTTTCATAGGCATGAGGTTTGATACTCTTGAGTGTGCTCAA
GAACACTACAATGCCTACGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAATCCAGAAAAACTGGAAA
GTTGGAGAAGCAACAATTTGTTTGCAAGAAGTTCCGAAAACCAAAAGTTGATGATGGAGGTGCGGAAACTGTCCCTGCCC
TAGATGTGATTGAGGACACTAATGGAGATGCAGAAGATGGTGCAGACGATGAGATTGTCTTCCTTGATGATGAGTGCAGG
AA-AAAAAAGAAGTCCAAGAAAAGAAAGCGAGATACAATAGTGCAGACAGGGTGCAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTCGGTG-GTAGGTGGTTTTCTTTATTGCTGAACACAATCATGCATTGGTTGATAAGCCATCACTAACTAAGTA
CCTTCGATCACACCAAGGGATCCCTCCAGAAGAGAAACTGTTCTTGAAAAATCTTCATAATTGTAATTTGACCACCGGTG
TGTG----------------------------------------------------------------------------
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--------------------------------------------
>chr2B_513
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----------------------------------TTTGCTTCTAGAGTTGCCTTCA--TTTTTGTTATTAGTTGCCTGTA
AAATCATTATTTGCTTTTTTTGTCAAACAGGTTGGC------GATGATTGACTTAAACGAATTGCCTGATGATGATGGTC
ACTCTGAAGTGCGTTTTACGGGTGGGATT-GAGTTGAAGACCCCATGTACTGCACGCAACCTAATGCCCCACAACCTGGT
GGAGTCTACAATGAGGTTGTAGGGGAATCGCCTAATCCCATGAGTACCCAACATGCTCCTATTGCGCCTGAAGAAGCTAT
GCAGACAGAAGGCGACACTTTTGATGACACAACAATGTTTGGTGAAATAGGTGGAACTATTGGACAAGGGGTTGTGGGAA
ATGATAATGACGATGAAGCTTGGTCCCAACCAAGAGAGCCTTTCATAGGAATGAGGTTTGATACTCTTGAGTGTTCTCAA
GAACACTACAATGCCTACGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAAAACACAAAAACTAGAAA
GTTGGAGAAGCAACAATTTGTTTGCAACAAGTTCTGAAAACCAAAAGTTGATGATGGAGGTGCGGATACTGTTCCTGCCC
TAGATGTGATTGAGGACACTAATGGGGATGCAGAAGATGGCGCAGACGATGAGATTGTCTTCCTTGATGATGAGTGCAGG
AA-AAAAA-GAAGTCCAAGAAAAGAAAGCGAGATACAATAGTGCAGACAGGGTGCAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTCGGTG-GGAGGTGGTTTTCTTTATTGTTGAACACAATCATGCATTGGTTGACAAGCCATCACTAACTAAGTA
CCTTCGAACACACCAAGGGATCCCTCCAGAAGAGAAATTGTTCCTGAAAAATCTTCATAATTGTAATTTGACCACTGGTG
TGTG----------------------------------------------------------------------------
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>chr4D_523
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--------------------------------------------GAGTTGCCTTCA--TTTTTGTTATTAGTTGCTTGGA
AAATCATTATTTGCTTTTTTTGTCAAACAGGTTGGC------GATGATTGACTTAAACGAATTGCCTGATGATGATGGTC
ACTCTGAAGTGCGTTTTACGGGTGGGATTGGAGTTGAAGACCCCATGTACTGCACGCAGCCTAATGCCCCACAACCTGGT
GGAGTCTACAATGAGGTTGTAGGGGAATCGCCTAATCCCATGAGTACCCAACATGCTCCCGTTGCGCCTCAAGAAGCTAT
GCAAACAGAAGGCGACACTTTTGATGACACAACAACGTTTGCTGAAACAGGTGGAACTATTGGACAAAGGGTTGTGGAAA
ATGATAATGACGATGAAGCTTGGTCCCAACCAGGAGAGCCTTTCATAGGCATGAGGTTTGATACTCTTGAGTGTGCTCAA
GAACACTACAATGCCTACGCTCTCCGACTTGGGGTTTCAATCAAGATGAACACTTCTAGGAAATCCACAAAAACTGGAAA
GTTGGAGAAGCAACAATTTGTTTGCAACAAGTTCCGAAAACAAAAAGTTGATGATGGAGGTGCGGAAACTGTCCCTGCCC
TAGATGTGATTGAGGACACTAATGGAGATGCAGAAGATGGTGCGAACGATGAGATTGTCTTCCTTGATGATGAGTGCAGG
AA-AAAAA-GAAGTCCAAGAAAAGAAAGCGAGATACAATAGTGTAGACAGGGTGCAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTCGGTG-GGAGGTGGTTTTCTTTATTGCTGAACACAATCATGCATTGGTTGATAAGCCATCACTAACTAAGTA
CCTTCGATCACACCAAGGGATCCCTCCAGAAGAGAAACTGTTCCTGAAAAATCTTCATAATTGTAATTTGACCACAGGTG
TGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr3A_600
--------------------------------------------------------------------------------
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-----------------------------------------AGATGATTGACTTAAATGAATTGCCTGATGATGATGGTC
ATTCTAAAGTGCGTTTTACGGGTGGAATTGGAGTTGAAGACCCCATGTACTGCACGCAGCCTAATGCCCCACTACCTGGC
GGTGTCTACAATGAAGTTATAGGGGAATCGCCTAATCCCATCAGCACCCAACATGCTCCTGCTGCACCTGAAGAAGCTAT
GCAGACAGAAGGTGATACTTTTGATGACACCACCACAATTGGAGAGACAGGTGGAACTATTGGACAGGGTGTTGTGGGAA
ATGATAATGATGATGAAGCTTGGTCACAACCAAAAGAGCCTTTCATAGGCATGAGGTTTGATACTCTCGAGGGTGCAAAA
GAACACTATAATGCCTATGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCCAGGAAATCAACAAAATCTGGTTT
GCTGGAAAAGAAACAATTTGTTTGCAACAAATACCGAAAACCGAAAGTTGATGACGGAGGTGCGGAAACTGCCCCTGTCC
TAGATGTGATTGAAGATTTGAATGGAGATGGCAATGATGTTGAGGATGACGAGATTGTCTTCCTTGATGATGAGTGTAAA
AAGAAGAA-GAAACCTAAGAAAAGAAAGCGAGATACAATAGTCCAAACAGGGTGCAGAGCAAGAATGGTTGTGAAGTTAA
TGGACAGCCGGTG-GGAGGTGATTTTCTTTGTTCGTGAACACAATCATGCATTGGTTGACAAACCATCACTAACTAAGTA
CCTCCAATCACATCAAGGGATTCCTCCGGAAGAAAAACTATTCCTGAAGAATCTTCATAACTGTAATTTGACCACAGGTC
TGTGCATACATTCAA-CC-AAAAAAACTCTGTTTTCTTAGTAGAATTTTTTCATAAAGTTGCCTGTTATTATTTTGCAAG
TTGCTTGTACTTAGTTCCTGTTTTTGCCAACTAATCTGGTATCACATGGGAAACTTTTTGTGGTTTCTACAGAATTGCTT
GCAATTAAGTAGGCAAACTTTGTGGGTCCTCTGAAAAAATAATTTACACGGAGTTGCCTTTTTTGCTCCCTGCAAGTTGC
TTGTTCTGTTTTAAGCAAGTTGCTTGCACATACTTATTTGTGTTTACCT-TTGCGTCCCATGTAAGTATACAGTCTATTT
TAGCCCATTGTACAACCTATAGAAAAAGG------AAAAACAAACCCTTGGCATCCTAGAGGCGAGGC------------
---------------------AAGTTCTTGTATAAGAAAGTAGGCAACTTGTGATTCTTGTAGTGTAAGCAACTTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CGAGTTTCTGTGGTAGTTAGTAATTTGAATAACTAG--------------------CTTGCTTTG---------
-------------------------------TGTTTC--TTCATGCAAACAAAGCCTGATTTTTTTCATGTATTGTTGCA
GGACGTATGATGAACATCATGTCTGAATTTTATGGGTCAGAGCTAATCGTGCCTTATGCAACTAAAGCAATATCAAATCT
TAAATCCGGCTTGAACAAGATGGCAACGAGGGAAGGAGATATGATTGAGACAGTTGCTTACTTCAAGGATCAACAGAGAA
TGGACCCTGA-GTTTTTCTACAAGGTCAAATATGATGAGGAGGATAGGGTTGTCAATATTTTCTGGGTTGATGGAGCAGC
TCGCAGAGCGTATGCTGAGGCTTACCATGATTGTGTCTCCTTCGACACGACATACATGACAAACATGTATAACATGCCAT
TTGCACCGTTTATTGGCATTAACCACCACGGGCAGTCATTCATGTTGGGGTGTGGATTTGTTTGGCAAGAATTGGAAACG
AGCTTTGATTGGTTGTTTGGTGCATTCCTTGAAGCAATGAATGG
>chr5D_600
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------AGATGATTGACTTAAATGAATTGCCTGATGATGATGGTC
ATTCTGAAGTGCGTTTTACGGGTGGAATTGGAGTTGAAGACCCCATGTACTGCACGCAGCCTAATGCCCCACTACCTGGT
GGTGTCTACAATGAAGTTGTAGGAGAATCGCCTAATCCCATCAGCACCCAACATGCTCCTGCTGTGCCTGAAGAAGCTAT
GCAGACAGAAGGCGACACTTACGATGACACAACAACGTTTGCTGAAACAGGTGGAACTATTGGACAAGGGGTTGTGGGAA
ATGATAATGACGATGAAGCTTGGTCCCAACCAAGAGAGCCTTTCATAGGCATGAGGTTTGATACTCTTGAGTGTGCTCAA
GAACACTACAATGCCTACGCTCTCCGACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAAAACACAAAAACTGGAAA
GCTGGAGAAGCAACAATTTGTTTGCAACAAGTTTCGAAAACCAAAAGTTGATGATGGAGGTGCGGAAACTGTCCCTGCCC
TAGATGTGATTGAGGACACTAATGGAGATGCAGAAGATGGTGCGGACGATGAGATCGCCTTCCTTGATGATGAGTGCAGG
AA-AAAAA-GAAGTCTAAGAAAAGAAAGCGGGATATAATAGTGCAGACAGGGTGCAAAGCAAGGATGGTTGTGAAGCTAA
AGGATAGTCGGTG-GGAGGTGGTTTTCTTTATTGCTGAACACAATCATGCATTGGTTGATAAGCCATCACTAACTAAGTA
CCTTCGATCACACCAAGGCATCCCCCCAGAAGAGAAACTGTTCCTGAAAAATCTTCATAATTGTAATTTGACCACAGGTG
TGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr7B_638
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--TCTGAAGTGCGTTTTACGGGTGGGATTGGAGTTGAAGACCCCATGTACTACACGCAGCCTAATGCCCCACAACCTGGT
GGAGTCTACAATGAGGTTGTAGGGGAATCGCCTAATCCCATGAGCACCCAACATGCTCCTATTGCACTTGAAGAAGCTAT
GTAGACAGAAGGTGACACTTTTGATGACACAACGACGTTTGGTGAAACAGGTGGAACTATTGGACAAGGAGTTGTGGGAA
ATGATAATGATGATGAAGCTTGGTCCCAACCAAGAGAGCCTTTCATAGGAATGAGGTTTGATACTCTTGAGTGTGCTCAA
GAACACTACAATGCCTATGCTCTCTAACTTGGGTTTTCAATCAAGATGAACACTTCTAGGAAAAACACACAAACTGGAAA
GTTGGAGAAGCAACAATTTGTTTGCAACAAGTTCCGAAAACCAAAAGTTGACGATGGAGGTGCGGAAACTGTCCCTGCCC
TAGATGTGATTGAAGACACTAATGGATATGCAGAAGATGGTGCAGACGATGAGATTGTCTTCCTTGATGATGAGTGCAGG
AA-AAAAA-GAAGTCCAAGAAAAGAAAGCGAGATACAATAGTGCAGACAGGGTGCAGAGCAAGGATGGTTGTGAAGCTAA
AGGATGGTCGGTCCGGAGGTGGTTTTCTTTATTGCTAAACACAATCATGCATTGGTTGACAAGCCATCACTAACTAAGTA
CCTTCAATCACACCAAGGGATCCCTCCAGAAGAGAAACTTTTCCTGAAAAATCTTCATAATTGTAATTTGACCACTGGTG
TGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6D_1699
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------AGAAAAGGATGTGCA-ACTT-CTGCGTCCTTGGTGCACATAAGTTGCCC-C
ACCACGCAAAAAAAGTTGAGC---TTTTCTAGG---AAAACAAATTGATTCATTGTGTGCCAGGGGG-A-CATAACTTGC
CTGCATCTATGGAAACTATATGAGTTAGAAA-GAAAAGGATGGGCAACTTCTGTGTCCTTGATGCACATAAGTTGCCCCA
-CCACGC-------------------------------------------------------------------------
-----------------------------------------------------------------------------AAA
TATAGTTGAGCTTCTCTGAAAAAAAGCAAATTGATTCATTGG--------------------TTTGTG--TTGCTTTGCT
GTTGTTCTGTTTTCCAGTAACTT-CGTTGCTTGTT-TCTTTCATATCCTAACTTTCTTTCTGCATGCG---ATTTGTGCA
GGTCGTATGATGCAAATTATGTCTGAATTTTATGGGACAGAACTAATTGTTCCTTATACAACTAAAGCAATATCAAATCT
TAAATCGAGCTTGAACAAGGAAGCTACTAGTGAAGGAGATATGATAGAGACAGTAGCCTACTTCAAGGAGCAAGAGAAAA
TAGATCCTGA-TTTTTTCTACAAGGTCAAGTATGATGAGGAGGACAGGGTTATGAACATTTTCTGGGTTGATGGACTAGC
ACGCAAGGCGTACGCTGAGGCTTATCATGATTGCATTTCCTTCTACACGACATACATGACAAACATGTACAACATGCCTT
TTGCACCATTCATTGGTATCAACTGGCACGGGCAGTCATTCATGTTGGGGTGTGGATTTGTCAGGCAAGAATTGGAGACG
CGCTTTGATTGGTTGTTTGGGAGTTTCCTTGAAGCAATGCCTGG
>chr1D_1699
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------AGAAAAGGATGGGCA-ACTT-CTGTGTTCTTGATGCACATAAGTTGCCCCC
CACACAAAAAGTGGAGTTTTT-------TCTGGAAAAAAACAAATTGATTCATTGTGTGCCAGGGGGGGGCATAACTTGC
CTGCATCTATGGAAACTATATGAGTTAGAAAAGAAAAGGATGGGCGACTTCTGTGTCCTTGATGCACATAAGTTGCCCCA
-CCACGCAAAAAAAGTTGAGCTTTTCTGGGAAAACAAATTGATTCATTGTGTGCCAGGGGGACATAACTTGCCTGCATCG
ATGGAAACTATATGAGTTAGAAAGAAAAGGATGGGCAACTTATGTGTCCTTGATGCACATAAGTTGCCCCACCACGCAAA
TATAGTTGAGCTTCTCTGGAAAAAAGCAAATTGATTCATTGG--------------------TTTGTG--TTGCTTTGAT
GTTGTTCTGTTTTCCAGTAACTT-CGTTGCTTGTT-TCTTTCATATCCTAACTTTCTTTCTGCATGCG---ATTTGTGCA
GGTCGTATGATGCAAATTATGTCTGAATTTTATGGGACGGAACTAATTGTTCCTTATACAACTAAAGCAATATCAAATCT
TAAATCGAGCTTGAACAAAGCAGCTACTAGCGAAGGAGATATGATAGAGACAGTAGCCTACTTCGAGGAGCAAGAGAAAA
CAGATCCTAATTTTTTTCTACAAGGTCAAGTATGATGAGGAGGACAGGGTTATGAACATTTTTTGGGTTGATGGACCAAC
ACGCAAGGCGTACGCTGAGGCTTATCATGATTGCATTTCCTTCGACACGACATACATGACAAACATGTACAACATGCCTT
TTGCACCATTCATTAGTATCAACCGGCACGGGCAGTCATTCATGTTGGGGTGTGGATTTGTCAGGCAAGAATTGGAGACG
AGCTTTGATTGGTTGTTTGCGAGTTTCCTTGAAGCAATGCATGG
>chr1B_1699
AAAAA---------------------------------------------------------------------------
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------------------------------------GATGGGCA-ACTTCCTGTGTACTTGATGCGCATAAGTTGCCCAC
ACCACACAAAATAAGTTTAGA---TTTCTCTGGAAAAAAGCAAGTTGATTCGTTGTGTGCTAGGGGACA-CAAAACTTGC
CTGCATCTACTGAAACTGTAGAAGTTAGAAAAGAAAAGGATGGGTAACTTCTGTGTCCTTGATGCACATAAGTTGCCCCA
-CCACACA------------------------------------------------------------------------
-----------------------------------------------------------------------------ATA
AAGTTTAGATTTTCTGGGAAAAAAAGCAAATTGATTCATTTG--------------------TTTCGTGTTTGTTTTGTT
GTTGTTCTGTTTTCCAGTAACTTACGTTGCTTGTTTC--TTCATATGCTAACTTTCTTTCTGCATGCG---ATTTGTGCA
GGTCGTATGATGCAAATTATGTCTGAATTTTATGGGACGGAACTAATTGTTCCTTATACAACTAAAGCAATATCAAATCT
TAAATCGGGCTTGAACAAGGCAGCCACTAGTGAAGGAGATATGATAGAGACAGTAGCCTACTTCAAGGAGTAAGAGAAGA
CAGACCCTGA-TTTTTTCTACAAGGTCAAGTCTGATGCGGAGGACAGGGTTATGAACATTTTCTGGGTTGATGGACCAAC
ACGCAAGGCGTACGCTAAGGCTTATCATGATTGCATTTCCTTCAACATGACATACATGAAAAACATGTACAACATGCCTT
TTGCACCATTCATCGGTATAAACCGGCAAGGGCAGTCGTTCATGTTGGGGTGTGGATTTGTCAGGCAAGAATTGGAGACG
AGCTTTCATTGGTTGTTTGGGAGTTTCCTTGAAGAAATGCATGG
>chr1B_1796
--------------------------------------------------------------------------------
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-----------------------------------------------------TGTGTGCCAGGGGA-A-CATAACTTGC
CTGCATCTATGGAAACTATATGAGTGAGAAA-GAAAAAGATGGGCAACTTCTGTGTCCTTGATGAACATAAGTTGCCCCA
ACCACACA------------------------------------------------------------------------
-----------------------------------------------------------------------------ATA
A-GTTGAGCTTTTTTG----AAAAAGCAAATTGATTCATTGTTGTTTTTAGGTTGCATGTGCTTTGTG--TTGGT---TT
GATGTTCTGTTTTTCAGTAACTA-CGT-------------------------------------TGCG---ATTACTGCA
GGTTGTATGATGCAGATTATGTCTGAATTTTATGGGACAGAACTAATTATTCCTTATACAACTAAAGCTATATCAAATCT
TAAATCGGGCTTGAACAAGGCAGCCACAAGAGAAGGAGATATGATAGAGACAGTAACCTACTTTAAGGACCAAGAGAAAA
CAGATCCTGA-TTTTTTCTACAAGGTCAAGTATGATGAGGAGGACAGGGTTATGAATATTTTTGGGGTTGATGGACCAGC
ACGCAAGGCGTACACTGAGGCTTATCATGATTGCGTTTCCTTCAACATGACATACCTGACAAACATGTACAACATGTCGT
TTGCACCATTCATTAGCATCAACCGGCACGGGTAGTCATTCATGTTGGGGTGTGGGTTTGTCAGACAAGAATTGGAGACG
AGCTTTGATTGGCTTTTTTGGACTTTCCTTGAAGCAATGCATGG
>SNPs
---------------------------------------S----------------------------------------
---S--------S----------------S--------------------------------------------------
---------------------------------------------S--------------------S-------------
---SSSSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------S------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------S---------------------------------S------------------S-
-----S---------------------------------------------S----------------------------
--------------------------------------S-----------------------------------------
----------------------------------------------------------S---------------------
---S-S--------------------------------------------------------------------------
----------------------------------------------------------------------------S---
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------------------S-------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
------------------------------------------------------------------------------S-
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-------------------------------S------------------------------------------------
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-----S----------------------S---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
S-------------------------------------------
>forward_666
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------AAATGCGTTTTACGGGTGGC------------------------------------------------------
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--------------------------------------------
>reverse_2326
--------------------------------------------------------------------------------
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-----TGAGCTTGAACAAGGCAGCT-------------------------------------------------------
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--------------------------------------------
