>input_sequence_78556
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-------------------------------TGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGT
GGAGTCGTCGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGGCTCA
TCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTC
CTCCGCCTGCGCGGCGGCGCCAAGAAGCGCAAGAAGAAGACCTACTCGACGCCCAAGAAGGTCAAGCACGAGCGCGAGAA
GACCCCGCTCGCCGTGCTCGGCTACTACAGGGTGGACGACGCCACGGGCAAGGTGGAGAGGCTGCGCAAGGAGTGCCCCA
ACCCGGACTGCGGCGCCGGCACCTTCATGGCGGCGCACGCCGACCGCCACGCCTGCGGCAAGTGCGGCCTCACCTACGCC
TACGCAGAGGCCCAGAGCCCAGAGATCGACAGTGATTGA-----------------------------------------
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>chr1B_1_TraesCS1B01G182700
GAGCTTGTGAACTGAACCAAGATTATACAAGAAGCAAAGGTAAGTTGTTTATAGTTAACAAATTCAAGCATTTAACTGTA
TTTGTCCGATTGTGATCATTACCCAGAAACCAAACTAATTTCAGCACGCCCTTTATCATTTTGTTAAGTCCACAATATGA
GACAATTTGATACGCAATGATCTCAAAGATAAGCAATAAGACACAACAC-----TGGAGAAACACAGAACAATTTGATTC
AC--AATGGATCATATAATCTAGTACCAAGAATAGAAAAACAAGGAGAACTAAGCCTCGCGTTGGGAGTACGATGCTACA
ACTAACACAATTATCCCTAAAATCAACATACGGATTGGGTGAAAATGGACAGATGAGATCTTGATCGGGGAGAAGAGAAA
AGAGAACAGAGACACGGACCTGCTCCTGCGCACCGAGGCCGGTGCCCTCCTTCCACCCGGATTTCTTCAGCAGCTGCAGC
AACCCAAGAACACACGACCATCAGGCTCACGCAGGGCAACAAAGCATCAAACCCTAATCCTCCGCGAGGGGAGGGAGGGA
AGGATGGATGGGCAGCAGAAGAAACCAAGCGAGGGACGGACCTGGAAGCCGATGTTAGAGGAGCCGATGGACGACATCGT
CTCTCTCACCGGGCGAACGCGGCGCCCCTCTGCCTCCGCTCGCCGCGCGCTTCACCGGCTCTCTCTCCTCTCCCCGTTTC
AGGCGTCGCGTGCGCCGCTTTGGTTTTACTTCTCTGGTCTGGTCTCCGTCTCACGGGTCCTTGCCGTGTCCGGCTCGTTC
ACGAGTCGGTTCAGACCCGCTCGATCACAGGCGTCCGTCGCGTATCGGACGGCCTATCAAACGAACCAGGCTTACATATA
ACCCCATCTCCACCC-CCCATGGGCCGCGACGTTGCCCGACCAACCAAAGC-----TCCCAATCCACGCCGCCGCCGCCG
CCGCTGCCGACGAAACAGGTCATAATTCTCGGCGACCGGCGAACGAGGGCAAGA--------------------------
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-------------------------------TGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGT
GGAGTCGTCGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGGCTCA
TCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTC
CTCCGCCTGCGCGGCGGCGCCAAGAAGCGCAAGAAGAAGACCTACTCGACGCCCAAGAAGGTCAAGCACGAGCGCGAGAA
GACCCCGCTCGCCGTGCTCGGCTACTACAGGGTGGACGACGCCACGGGCAAGGTGGAGAGGCTGCGCAAGGAGTGCCCCA
ACCCGGACTGCGGCGCCGGCACCTTCATGGCGGCGCACGCCGACCGCCACGCCTGCGGCAAGTGCGGCCTCACCTACGCC
TACGCAGAGGCCCAGAGCCCAGAGATCGACAGTGATTGATCAGGTGGTCTGATTCGATGACGGAGTTG-ATTAGCGCCAT
GAATTCCGTGTACGTCTGGTAATGATTTTTTCAATGGATATTTGTGGTTAGAACAATTATTCTGGATATTTTTCTCAATT
AGTCATCAGTAAGCATGTTTTGGTCTGAATTGGAATGTGCTTTGGCATGCATCGTGACTTGATTGGCGACACTTG----T
GATCGGAGGGAGTAGTAGGCAGTATCCCTTCATCATATCAGATGCTTTGTTTGTGTTTTGAAGTCAATGGAAACTTCTAT
TGATTGGGAGTTACGGAGTACAATTTATATGGACTGGAGAGACGCGACGATC----------------------------
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----------------------------CGAG------------------------------------------------
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--------------------------------------------------AGGATGCGTCAGTTTCAGGGGATACGAGAG
AGAGAGACCTCCGTTGCGCGAGGAACCACAATGACGGTTGGGCAAGGGAAGATTCCCCACTAATTACATGTGCTAATTAA
TCACAACACTTCCTCTAATCTACGCTCTACCATGTAGAATCTTCTCATAATTGTCCAGGCGTTGTCATCATCTCAATAGA
ATTCTTCTCCAAAAGCTCTTCATTAAAATCATTGATAAGAACCTCAAACATAAACTCACAAAGAGAGATAGCGTAATGTG
ATGT-TTAAACAATGATTTTTCACATGATTTAACTTGCAAATGTTTATTTCCCCGTTTTTCTGAAGATCATGGGAAAAAA
CCACTTAGGAGAAATATGTGAGTGATATTACTCTTGTTGAATCCTGTTTGCATCTGTGATAATGGTAGGTGATTTTATCG
ATCATTCTGCGAAGCCACACACATTTGCATGTTATTTCAAATAATGAAATTATTTCAGAATGATTGGTAGATGTTGCCAC
CAAAGTCTGTTTTGAAGACTTCCATGACATAACAGTACCACCATGTAGGAACACAAAGCCGACAAAGCCGGCTTGTGATC
TGGCATTACGGGGATAAGATAAATAGCCAGCATCTACGAATCCAATCATATCAGAGTCCGATTTCTCTGGAACTGGAAA
>chr1D_1
GAGCTTGTGAAGTGAAC-AAGATTATACAAGAAGCGAAGGTAAGTTGTTTATAGTTAACAAATTCAAGTATTTAGCTTTA
TTTGTCCGACTGTGATCATTACCCAGAAACCAAACTAATTTCAGCACGCCCTTTATCATTTTGTGAAGTCCACAATATGA
GCCAATTTGATTCGCAGTGATCCCAAAGACCAGTAATAAGACACTTACAACACTTGGAGAAACACAGAACAATTTGATTC
ACAAAATGGATCATATAATCTAGTACCAAGAATAGAAAAACAAGAAGAACTAAGCCTCGCTTAGGGAGTACCATGCTACA
ACTAACACAATTATCCCTAAAACTAACATACGGATTGGGTGAAAATGGGCAGATGAGATCTTGATCGGGGAGAAGAGAAA
AGAGAATAGAGACACGGACCTGCTCCTGCGCACCGAGGCCGGTGCCCTCCTTCCACCCGGACTTCTTCAGCAGCTGCAGC
AACCCAAGAACACACGACCATCAGGCTCACGCAAGGCAACAAAGCATCAAACCCTAATCCTCCGCGAGGGGAGGGAGGGA
AGGATGGATGGGCAGCAGAAGAAACCAAGCGAGGGACGGACCTGGAAGCCGATGTTAGAGGAGCCGATGGACGACATCGC
CTCTCTCACCGGGCGAACGCGGCGCCCCTCTGCCTCCGCTCGCCGCGCGCTTCTCCGGCTCTCTCTCCTCTCCTCGTTCC
AGGCGTCGCGTGCGCCGCTTTGGTTTTACTTCTCTGGTCTGGTCTCCGTCTCACGGGTCCTTGCCGTGTCCGGCTCGTTC
ACGAGTCGGTTCAGACCCGCTCGATCACAGGCGTCCGTCGCGTATCGGACGGCCAATCAAACGAACCAGGCTTACATATA
ACCCCAT-------CCCCCAGGGGCCGCGACACCGTCAACCAACCAGACTCTCGAATCCCAATCCACGCCGCCGCAGCCG
CCG------ACGCAACAGGTGGTAAATCTCGGCGAGCGAGGGCG-------AGA--------------------------
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-------------------------------TGCAGATCTTTGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGT
GGAGTCGTCGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGGCTCA
TCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTC
CTCCGCCTCCGCGGCGGCGCCAAGAAGCGCAAGAAGAAGACCTACTCGACGCCCAAGAAGGTCAAGCACGAGCGCGAGAA
GACCCCGCTCGCCGTGCTCGGCTACTACAGGGTGGACGACGCGACGGGCAAGGTGGAGAGGCTGCGCAAGGAGTGCCCCA
ACCCGGACTGCGGCGCCGGGACCTTCATGGCGGCGCACGCCGACCGCCACGCCTGCGGCAAGTGCGGCCTCACCTACGCC
TACGCCGAGGCCCAGAGCCCAGAGATCGACAGTGATTGATCAGGTGGTGTGATTCGATGACGGAGTTGGATTCGCGCCAT
GGATTCAGTGTACGTCTGGTAATGAATTTTTCAA---------------AGAACAATTATTCTGGATAATTTTCTCAATT
AGTCATCAGTAAGCATGTTTTAGTCTGAATTGGAATGTGCTTTGGTATGCATCATGACCTGATTGGCTGACACTTACTAT
GGTCGGAGGGACTAGTAGGCAGGCTTGAGAATGGAGCGGTAATCAGAGGCCCGGCAAGACCAAATCGTGAGAATCCACCG
GCTGGAATTCGATCTAAGAGCAACTCCAAGGCGGCAACCCATTTCGCGCGCCGATTGTTTGAGTCGCGGCGGACAAAGCT
TGCGCAACGCGTCGACCCATTCTCAAAACACGTCAGTGCGGACCAATTTTCGGCCCAAATTTAGGCCTGAATTATGTCGG
CGCGGACATGAAACAGACGCGCTGCCCGTCCTCTCGGTGTCCACCGTGTCCCCACGTGGTGGCTGGTCAACTACCTTCCG
CGTCTTTATTAATAACAACTGTAGACCACGAGCCCATGCGTCAGCGACGGCGGACGGCCCTTTTTAATCGGACGCGGCTA
GGGAGCGGCCGACTGCTC---------------------CTAGCATCCCCTGGCAGCCGGCCAGAACAAGAAACTTTTGG
TTCTCCTTGACAAAAAGGGAAACTTGTCGGCCCAGGCTACAACCTGCTCTCCCCATCTAGTCCCTCCCTCACCTCACTTG
CTTCCTCAAAACCTCCCCTTCTCCTGAGCATACCAAAAACCCCCGTGTACCCATCTTCTTCTCCATCAAGTTAGGTTTCT
CCCTTCCCAAGATCCAGAAAGCCAGATCCAAATTGACAGACAAAACTCAGAACAAAAGGCAAAAACACACAAAGAAGGTC
AGATTTGCTCAACTCTTCCATCTAAAATCAGAAACAAGCATCTGTTGTGGTTATTTCTTAAGCAAAAAATCCCAGGGTTT
TAGGCAAAAACTGCTGCAGTTTTTAAGCAATAGAAAGCATGGTTATTTCGTGCAAAAAACTGTGGTTCGTATCAGTAACT
ATATGATCTGGGCAAAGCACTGATACTAATAACCCTAGTGTAGGCAACTTGTCTGATTTTTTTAGGCAACTATCATGACT
GTGTTAAGCAACTGATGGGCAATCAGTGTAGCTATAACTTAGCAACCTTAGTAACTACGGGTGCCGGTGAACTAAACAAA
AAACCCTAGTCTTTTAAGCAACTTCTCTGCTTGTTTTAGGCAACTAGTGTGGTGGTTTGAAGCAAAACTGGTAAAATTTG
GTGCAAAAAAAGAGAAATCATGGTAGATGTCAAGTATTGATAAATACTATGCGCAACTTGTGTGTTCAGAATCAAAAGGA
AAAAACATAGGTACGATGTGAAATACCAAAAAAATTGTAAACGAACATTACTTTGGAGAATGGACTAAACATTGCCTCGG
AGAATTGACTGAACATTGCTTCCTATCAATTGTACTCCCCGGGAAGAAATTTAGGTTGCTCCTGCAAAGAAGGGTTCATC
CACAAAAGAAACACAGGAAAAACACATGAACCCTTGGGGTCTCCAACGCGTTAAGATAGTTCAACAAGAAAAAAGAAGAG
GCTAGAAACACAGGTGGTTATGATGTTACTGGTACGAATTTACATACAAACAAAGTACTAAACATGAAGAATATGTCACC
CCAGCTACTTCTAGTACTGGTATATAAATTTTCTGGGACATACAATAAGCTACTCTCGAAGTCACTAATATTGGCTTTTC
CTGTCGATGCTAAAAACACTTTGAAAAGAAAACATCCTTTCCCATGAAAAAAGCTTGCTTCATCAGGCCTTGAAAACGCA
CGAAATTAGATGTATCTTGCAGGCATTTAGAAAAAGCAAAATAACATAAATTGATCATTAAACTACTAAAAAATCATCTT
CTCATGTAGGCAACTACTGACAGTAGTTGCCTAAAGCAATCATAGGAAACTGCTGTATTGATAGCAGTTGCCTGAAACAA
ATCATAGGCAACTACTGTAAAAGTACAGTCATTTAGAAACCATGGCTACTGCCCATATACTTCAAAAAGAAACTTGAATA
TACTAGTTTGTAACAACTTGTGTCACTTTTTCATGTTGATTACGTGATTAAAGGAAATCATATACTTGTTGTTACAAAAA
ATGTTGCCTAGGGACAGTGTGTTAGTTGCTTGCCTCATCCAACTAAACTTCTCGCTTCTCTGGTTTGAAAAAATGTGTAG
GATGGAGATGATTGACCTAAATGAGCTGCCAGAAGACAATAACCCTGGATTGCAAATTCCTGGCAGCAATAATATTGGAG
ATCCTGCATTTTACACACAGCAGAGCATCCACCCAGGTGATGCTGAGCATGCTGAGTTCGTTGCAGAATCTCCTAATCCT
ATGGTCACGCAAAATGTTGGCAAACCCGTGCCAGAAACAATGGATACGGGTGGGCACTCCCTTTTTTTGACGGGAAGGCC
TACTGGCTATTAAAATCAAATAATGCTTACATCATCCGCTAAGAATTTAACTAGGAAATCAGGGGGTCATCCACCCAAAC
CGAAGGGGGATTAAGACGACCCCATGTAGCTAACTCATGAGAAACTACATTCGACTCCCTATTACAATGCTCAATAGTCA
CCTTCCCGAACTCTTTCAGAGTATTCCTGCAATTTTCAAGTACAGGAGCTGCCACCATAGTGTGTCCTTCATTAAGCTTC
AGAGCTTCTACCACGGTGATATTATCCATTCTCACCATGATATTAGAGCAACCAACGGCCTGACACAATTTTAAACCCTC
AAGGAGTGCTGCTGCCTGTGCGGCTGACGGGTGGGCACTCCCTTAATGCTGGGGGAGGCGCGGGTGGTAGAACTAACCCT
GGAACATAAGCAGCTGAGACAGATGCGCGCACCCTTGATGACACAGGTGCTGCAGGTGATACTGTAGGGACTATTGGAAA
TGCATTGACATGCTTGCGAGGTGAGAACGATGATGAAGCTTGGTCACAACCTAGGGAACCTTACATTGGCATG-------
--------------------------AGGTTCGACACTTTGTAAGGCGCCAAAGAACACTACAATGTGTATGCTTTAC--
--AACTTGGGTTTTCAATCAAGATGAACACATCAAGGAGGGTTGTTGATACTGGTGAGTTGATAAAGTAGCAG-------
---------------------TTTGTTTGCAAGAAGTTTCGGAAATCAGTTCAGACCCGCTCGATCACAGGCGTCCGTCG
CGTATCGGATGACCAATCAAACGAACCAGGCTTACATATAACCTCATCCCCCAGGGGCCGACACCGTTAACCAACCAAAC
TCTCAAATCCCAATCCACGCCGCCGCCGAAGCAACAGGTCGTAAATCTCGGCGAGCGAAGGCGAGATGCAGATCTTCGTG
AAGACGCTGACGGGGAAGACGATCATGCTGGAGGTGGAGTCGTCGGACATGATTGACAACGTGAAGGCCAATTTCCAGGA
CAAGGAGGGGATCCCGCCGTACCAGCAGCGGCTCATCTTCGCCGGGAAGCAGTTGGAGGACGGGCGCACGCTGGCCGGCT
ACAACATCCCGAAGGAGTCGACGCCGCACCTGGTCCTCCGCCTCCGCGGCGGCGCCAAGAAGCACAAGAAGAAGACCTAC
TCGACGCCCAAGAAGGTCAAGCACGAGCACGAGAAGACCCCGCTCGCCGTGCTGGGCTACTACAGGGTGGACGACGCGAC
GGGCAAGGTCGAGAGGCTGCGCAAGGAGTGCCCCAACCCGGACCGCGGCGCCGGGACCTTCATGGCGGCGCACGGCAACC
GCCACGCGTGCGTGCGGCCTCACCTACGCCTACTCAGAGGCCCAGAGCCCAGAGATCGACAGTGATTGATCAGGTGGTGT
GATTCGATGACGGAGTTGGATTAGCACCATGGATTCGTGTACGTATGGTATTGATTTTTATTGTGGTTAGAACAATTATT
CTAGATATTGTTCTCAGTTA------------------------------------------------------------
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>chr1A_1
GAGCTTGTGAAGTGAAC-AAGATTATACAAGAAGCGAAGGTAAGTTGTTTATAGTTAACAAATTCAAGTATTTAGCTTTA
TTTGTCCGACTGTGATCATTACCCAGAAACCAAACTAATTTCAGCACGCCCTTTATCATTTTGTGAAGTCCACAATATGA
GACAATTTGATCCGCAATGATCTCAAAGACCAGTAATAAGACTCTTACAACACTTGGAGAAACACAGAACAATTTGATTC
ACA--ATGGATCATATAATCTAGTACCAAGAATAGAAAAACAAGGAGAACTAAGCCTCGTGTTAGGAGTGCCATGCTACA
ACTAACAAAATTATCCCTAAAACTAACACACGGATTGGGTGAAAATGGGCAGATGAGATCTTGATCGGGGAGAAGAGAAA
AGAGAATAGGGACACAGACCTGCTCCTGCGCACCGAGGCCGGTGCCCTCCTTCCACCCGGACTTCTTCAGCAGCTGCAGC
AACCCAACAACACACGACCATCAGGCATACGCAAGGCAACAAAGCATCAAACCCTAATCCCCAGCGTGGGCG----GGGA
AGGATGGATGGGCAGGGGAAGAAACCAAGCGAGGGACGGACCTGGAAGCCAATGTTAGAGGAGCCGATGGACGACATCGC
CTCTCTCGCCGGGCGAACGCGGCGCCCCTCTGCCTCCGCTCGCCGCGCGCTCCAGCGGCTCTCTCTCCTCTCCTCGTTCC
AGGCGTCGCGTGCGCCGCTTTGGTTTTACTTCTCTGGTCTGGTCTCCGTCTCACGGG-----------------------
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>chr1A_760
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----------------------------------------------CGTCTCACGGGTCCTTGCCGTGTCCGGCTCGTTC
ACGAGTCGGTTCAGACCCGCTCGATCACAGGCGTCCGTCGCGGATCGGACGGCCAATCAAACGAACCAGGCTTACATATA
ACCCCATCTCCACCCCACCATGGGCCGCGACATCGCCCAGCCACCCAAAGC-----TCCCAATACACGCCGCCGCCGCC-
-------CGACGAAACAGGTCATAAATCTCGGTGATCGGCGAACGGGGG-------------------------------
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--------------------------CAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGT
GGAGTCGTCGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGGCTCA
TCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTG
CTCCGCCTCCGCGGCGGCGCCAAGAAGCGCAAGAAGAAGACCTACTCCACGCCCAAGAAGGTCAAGCACGAGCGCGAGAA
GACCCCGCTCGCCGTGCTGGGCTACTACAGGGTGGACGACGCGACGGGCAAGGTGGAGAGGCTGCGCAAGGAGTGCCCCA
ACCCGGACTGCGGCGCCGGGACCTTCATGGCGGCGCACGCCGACCGCCACGCCTGCGGCAAGTGCGGCCTCACCTACGCC
TACGCCGAGGCCCAGAGCCCAGAGATCGACAGTGATTGATCAGGTGGTGTGATCAG-TGACGGAGTTGGATTAGCGCCAT
GGATTCAGTGTACGTCTGGCAAGGAATTTTTCAATGGGTACCTGTGCTTAGAACAATCATTCTGGATATTTTTCTCAATT
A-------------------------------------------------------------------------------
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>chr1B_997
AAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCGTCGGACACCATCGACAACGT
CAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACG
GCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTCCGCCTCCGCGGTGGCGCCAAGAAG
CGCAAGAAGAAGACCTACACCAAGCCCAAGAAGCAAAAGCACAAGCACAAGAAGGTGAAGCTCGCCGTCCTCCAGTTCTA
CAAGGTCGACGACGCCACCGGCAAGGTCACCAGGCTCAGGAAGGAGTGCCCCAACGCCGAGTGCGGCGCCGGGACCTTCA
TGGCCAACCACTTCGACCGCCACTACTGCGGCAAGTGCGGCCTCACCTACGTCTACAACCAGAAGGCTTAGAGGTGGCTT
GCGTTTGCTCTGCTCTTTTACCTATCGAGGATAGAACTCATTATATGTGTCCCTGTTTGTATTTGAAAACTGAAACCTTG
GAGTATTATGTATCCTAGATATTTGATCGCCTGCTGCTGAAATGCTATGCGAGCTTAAATTTTGGTCATTCTGAATGACG
TTAATCTATCTCATTGCAGCTATCGTATTTTATGCTTTGTTGATCTGATGGTGATGCGATCATGGAAACATGTATCTTGT
TGATACGTGTGTTCTTGAGCTTAACCCTTTATTTCAGGTGTTACTAGCCTATAGCTATGCATGGGTTCACATGTAGATGA
ATATTTTGCTATTGCTGTTTTGTCATGTGTTGATTGTTAGAGGGGTGTGATCGTTGTCACTTGCAATTAGAATTATGTTC
ATTCCAAGCGATTGCGTGGTTTGTTTGTTGTAGGTATGTTTGTTTTGTCATGCGTTATTTCATACCTAGATGTGCTTGAA
AACTCTGAATATATCTAGTTACCTTACTGTGGACAGTGGCAGTGCGATGATTGCTAGTGTGGAGCATAGTGCTGCCTTGT
TGTTTAACCAACAGTTTTGTGTGTGGTAACCATTCACCATTGCCTTGCCTACCTGTGGTGGTAATTTTGATTGAGTCTAT
CATACTGCCTTGTTGTTTAGCCATCAGTTTTGTGTGTGGTAACTTTTCACCATTCCCTTGCCTGCCAGTGTTGGTACTTT
TGATTGGGTCTATCATACCATATGTCTGTCGGTTTGTAGTTGTAGTTGATTTTTGCTCTTCTCATTTTGGTTTGTTCTTG
GGTTGTGATAAGTCATTTTACATGCGCTGAAGATCTTTATTTTATAACTAGTACAGAAGGTGGCTTTTGATGCATTGGAC
CGAAAGCACATCTTGTCACCAATCTTACGAGAATAATCAAAAAGTGCAAAAGCAATTTGGTTGTTTATTTTTCATGGCTG
TTGCAACAAGGCAGTTCAGCTATTGGAATTCTCATTGACAGACGTTTCAGTTTATTCTTTATGCCTGGACAAATACCCAT
TTGATGTGGTTATCCAAATATGTACATTTCTGTAGCCATGATCTGCATTTTTATTTTTCGCATCCGCATTACCCAAATTC
ATCTCTGAAGAAATGTAGCAAAGTCCTGCCCCGTGGTTTATCCATCTATTTTGTGTTCCATCATTAATCGTTGCCTGCCC
TGGGTGCATGTCATTGGTAATTCTGCTTTGATTTAGGAAATTGTGTGGTCATACCATATCTGTGCATGTGTTTGCAACCT
TAGATCTGATGTGTTGTTTGTCCTGAATATTTTTCTGGATGTGGCATTAGTTTGCATATGCTGAATATCTATAATTGCAA
GTGTGGTAGTAAGCGGACAAGTTTAGAAACTTGCTTAGTGTTAAGTCGGTTTCTGGAATGGTTCAATGCTATTTGAATTT
GGTGACCGTTTTCGAGTTATTGTTGTGGTTTGTATTCGCCATGCCTTGCCAGTGATCATGCAGCTGGAATTTGCTGATTG
CTGCTGCCATTGTTGTGAGATAACTCTTTGACTGCTGTTAGTTGTGCTGGAATCTTTACTTGTTTATTGTGTTGGGTATT
TCCACTCAGTCGTACACTATGTTGCCCTGGTACATTATGCGAAAGCATGGCATCACTGGGTACATCATCCTTCATGCATA
TTTGGAATTGATTGTCTCAGGACTGCATATTTAGAATTGATTGTCTCAGGACTGCATATTTAGAATTGATTGTCTCAAGA
CAGACATGGTTATGTTACGAGTTTACACTCTTGAACAACTATACCCTCTTGGTGTGGCTCTAAACCCATATTTGCCCAGA
ATGTTGTTGCTAAGTAACAAACCATGAGTGATGGTTGCCACACGGTGGAATCAAATTTCATGGTGCAAACACCACTAAAA
TTGGATGAAAACTAAATATCACTCTGGGCACCGTTTGAGTGCTGATATTGGGGTTTACAATTGGATATTGGCATTGGGAC
AGCCTGAATGTCGTTATTTGGATGGATGGTTGTGGTATGGAATCGAAGCCGAATACATTCCGCAGTCCCTTCTCTAATTT
GGAGCGTCCTTGCTTGGTTTTCATAGGAATTCAAGAGCGTGTACATCTCAAATGCAAGTTCGAGGCTTGCAAGTAACCAA
TGTCGAATCTGTAAATTCTTTTGTGTTTATATATTTAAAAAAAATAATTTCTAGGGGTAAATGGAATTTACACTTTTTTG
GGCAAGTGAATGGGATATATATTCTTTTAAGGAATTTTCAATTTTTTTGAGACAAAGAATGGATTGATTTTGCTTGTGGA
CGGTATTTTGTTTCTCAAAGAATGGAATTTACAAAAAAAATTGAGACAAAGAAAATTTACATGTTCATATTGACTGTGGA
ACGAACCCTCCTCACGTGGCATGGGCCACAAGCAAATCAATCCGATCCAGCCCAGCCCAAAATACCGTCCACAAAAGACA
GCCGTATGATCTTGAACCCCTAGATCCAACGGCTCATATTCTCCTGCCGACTGTACTTATAGAAAGCCTGACTCTTCCTT
CTCCCTAGCCTCCATTCCCACCGCGCCGCCCAACCAAACCCCACCGCGCCGCCGCCGCCGCCACCGTCGCCGCCGCAGCG
CGCGGAGGCGACCACCCCGCCGCCGCCAAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGT
GGAGTCGTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAGCAGCGCCTCA
TCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACGCTCCACCTGGTG
CTCCGCCTCCGCGGTGGCGCCAAGAAGCGCAAGAAGAAGACCTACACCAAGCCCAAGAAGCAAAAGCACAAGCACAAGAA
GGTGAAGCTCGCCGTCCTCCAGTTCTACAAGGTCGACGACGCCACCGGCAAGGTCACCAGGCTCAGGAAGGAGTGCCCCA
ACGCCGAGTGCGGCGCCGGGACCTTCATGGCCAACCACTTCGACCGCCACTACTGCGGCAAGTGCGGCCTCACCTACGTC
TAC-----------------------------------------------------------------------------
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>chr5A_1742
AATGG---------------------------------------------------------------------------
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----------------------------------------------------------------------AAACTTCTAT
TGATTAGGAGTTTCCAAGTACAATTTATATGGACTGGAGAGACGTGACGATC----------------------------
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----------------------------CGAGGGGATGTGTCGGTTCCAGGGGTCGCCACTCCGGTCGCTTCTGGAGTCT
CCTCTCGTGTGGTTTGAACCGCTGCCTAGTCGCTTAGTTCTAGCATCCCTCTTCATC-----------------------
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------------------------------------------------------------------------------TC
AAATCTTCTTCCACGGTGAGTGG---------------------------------------------------------
-------------------------------------------------------------------------------T
GGAACATGAGAAAAAGAGCAAGACGTCCTCCAATAAAGGGGACTCAATGCGGAAATCCAATTTACCTCCCGGGAGCACAT
GTTCCTGGACGTGGAAATGACTTTTGAAATGTCAAAAAAAATCTCAACAATTTTTTTATGTATTCATAGTCATATTCAAA
TGCCACCTACAAAGTTTTAGGAAAAAAGGTTAAACATTTTGGCATGTACAAAAAAACAAATTAAACACCTAATGTTACTC
CAAACTTGTGTTTTTCCCCGATGAAACAGTACTGCTCCGTTTCACATGAAAATTATCAAGCATGCTTGCAACACTAGCAC
ACACATCCACAAAAAAACAGATTTTTTTGAAAGCATTTTACTACTTTTTTTGCGTTATTGTTCATCGGGAGCAAATGCTC
CCGAGAGCCAAAATGCTTCCCCGACTCAACGAGCTTATTTTGAGAATTCTAGTTATGTGGTTGTAGCTTGTATCTCCATT
TTTTTGTGAATATGCAAAGCTTGCATATCTTTTATTTTTTCTGAATCATATTTTTGTTTCTTATTTTGCCGCTTATGTAA
TTATCCAAAATGTGAAAGATCCTAGTTCTA--------------------------------------------------
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----------------------------------------------GGTGTTGAAAATGTTTGAGATCAAATGAAAACTT
CTATTGATTGGGAGTTTCTGAGTACAATTTATATGGACTAGAGAGATGCAAGGATGCGTCGGTTCCAGGGGATACGAGAG
AGAGGCA--TCTGTTGCGGGAGGAACCGCAACGATGGTTCGGCAAGGGGAGATTCCCCGCTAATTACATGTGCTAATTAA
TCTCAACACTCCCCCTAATCTATGCTTGACCATGTAGAATCATCTCATAATTGTCCAGGCGTTGTCATCATCTCTACAGA
ATTCTTCCGCAAAAGCTCTTCATTAAAATCCTTGATGAGAACCTGAAACATAAACTCAGAAAGAGAGATAGTGTAATGTG
ATGTCTTGAACAAGGATATCTCAAAT------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>SNPs
-----------------S-----------------S--------------------------------------S--S--
---------S------------------------------------------------------S---------------
-----------S-----------------S---S----------S--SS-------------------------------
-----------------------------------------------------------------------S--------
----------------------SS------------------------S-------------------------------
------S------------------------------------------------------S------------------
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-------------------------------------------------------------------------------S
-------------------------------------------------------------------------S----S-
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-------------------------------S-S----SS---S------------------------------------
---SSSS------------------S---------S---------S---SS-----------------------------
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--------S-----------------------------------------------------------------------
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-------------------S------------------------------------------------------------
-----S------------------------------------------S-------------------------------
-S----S------------------S-----------S--SS----S---------------------------------
---------------------S-----------------------S-------S----S--------SSSSSS-S-----
-S---------S----------SS-SSSSSSSSS-SSSSSS--SSSSS-SSS-SSSSSSSS-SSSSS--S----------
-----S------S-SS----------------------------------------------------------------
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------------------------------------------------------------S---S---------------
----SS-SS--S------S--------S---S--S----S--------S---------S---------------------
--S-------S--S--------S---SS-------------S--------------------------------S-S---
-------SS---------------------S-----S-------S-------------S------------S--------
-------S-----S---S-S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_719
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-----------------------------------------------------------TCTCTCTCCTCTCCCCGTTT-
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>reverse_8168
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-------TGCGAAGCCACACACATTTG-----------------------------------------------------
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-------------------------------------------------------------------------------
