>input_sequence_78553
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-------------------------------------------------ATGACGGTGGAGAAGGTCGACGCGACGGTGG
CCGACTTCGACGGCCACTTCGAAAAGCTCTTCGCCGGCGACGATGGCGGCAAGCTGAAGCTGCTGCTCTTCCTCGCCGAC
CGGGAGCCGTCCTCCTCCCTCACCTGGTGCCCCGGTAACCTACCTATCCCC-TTCCCTAAGTATACTAGTATCAAATTAA
ACACGACTCCTGCTGGCTGATCCAAAAGCGGATTCGGGCGG----CGTGCGTGCAGACTGCAACGTGGCGGAGCCGGTGA
TCTACGAGAAGCTGGAGTCGGTGGGCAAGGACGTGGTGCTCCTGCGCGCGTTCGTCGGCGACAAGCCCACGTGGAGGGAC
CCGGCCCACCCGTGGAGGGTGGACCCGCGGTTCGCGCTCAAGGGCGTGCCGACGCTGCTGCGGTGGGACAAGGGCGCCGC
CGCGGGGCGCCTCGAGGACGACGAGGCCAACGTCGGGGACAAGATCGACGCCCTGCTCAATTGA----------------
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>chr7B_1_TraesCS7B01G192000
CATATGTCAGTCCCGACACTCTCGCAGATACATTTATCTAAACAACAAA--CTAGTAATTCGTACCGCGGAGCCTGTCAG
GCGGCCAAAAATGTTCCTGCTATCAGTGTTGGATTCCAGGAGTATGCTGTATATCTTCTTCGCTTCAAGGTACCCAATTT
CTACCGGACGAAAGGAGAACACAGGTACAGAATTAGATTCCACGCACACATAATTATTACTAGTGGACTGCGGACCTAAA
GAGGCTTGTTGTAGAAGCAAGTGGACGAGGGTTTTGCCGTGGGGATTTCGCCAAACTTAAACAGAAGCTGCGCAACCGAA
CCGAGGGCTAAGCCTGAGAGGGAGGAGTTACCTTCGAGCTCGAGGGTTTGGAGGTAGGGGTCGAGGTCCCGCGGGAGGGA
GGAGAAGGCGGCGGCGAGGCGGGAGCGGATGGCGGCGAGGCGCTTCCGCCAGTCCTGCGGCACCCGCTTGCGGTCGACCA
GCCACTCCTGCAGGCGGGCGAAGGCGATGTCGATGGGGAGGCTGCGGATCTCCGCCGGGTCGCGCATGACGGCCGCCGGG
TCGGCGGATCGACGGCGGGGGGAGGGGGCGGGACGCCGGCCGGAGCTTTTCGGGAAGAAGATGGGGACGAAAGTATGGAC
TGCGAGTCTGAT-TTTTTTTAGTGGAGCGAGTCTGATTTGCAGCCTTGCAGACTTTGGTTTACGGGAAGCTAGTGGGCCA
GATTAGTGGTCTCGGGTCTGTTCTGCTTATGCTGATGGGCTGCCGCTGGGCCGGCCGGAGGACCAGATTCCGGCTCGCGT
AGACGGCACGCGGGGGCGAGGTGTGGGTCCA-TCCGTCAGTGAGACAGAGACGGAGGAGAATCCGAAGAAATAAATATTC
AGGGCACGCCATCCCGTAGAGCGCGG-TAAT-AAAGAGTCGGCCGTCTTCTTTCCTCGGACTCCCCCGCAATCCCCATCT
T---CCCCTCCAAGCTTTCCAATCTTCCTTCTCGCCTGCCGCTGCCGAGATGACGGTGGAGAAGGTCGACGCGACGGTGG
CCGACTTCGACGGCCACTTCGAAAAGCTCTTCGCCGGCGACGATGGCGGCAAGCTGAAGCTGCTGCTCTTCCTCGCCGAC
CGGGAGCCGTCCTCCTCCCTCACCTGGTGCCCCGGTAACCTACCTATCCCC-TTCCCTAAGTATACTAGTATCAAATTAA
ACACGACTCCTGCTGGCTGATCCAAAAGCGGATTCGGGCGG----CGTGCGTGCAGACTGCAACGTGGCGGAGCCGGTGA
TCTACGAGAAGCTGGAGTCGGTGGGCAAGGACGTGGTGCTCCTGCGCGCGTTCGTCGGCGACAAGCCCACGTGGAGGGAC
CCGGCCCACCCGTGGAGGGTGGACCCGCGGTTCGCGCTCAAGGGCGTGCCGACGCTGCTGCGGTGGGACAAGGGCGCCGC
CGCGGGGCGCCTCGAGGACGACGAGGCCAACGTCGGGGACAAGATCGACGCCCTGCTCAATTGAGTTAGTTATCATGTGC
TGACGG----CTATCTCGTCTGCTTAATCCGAGTGCCAAGAGAATGCTTTTG-----GCGGCAGATGTTATCTACTATCT
GAAGTGTGCTCTTCTTGTAACCAGTCAGTCTCAGTCATGAACCAAATAAAACAGGGGAACGCGTAAACACAATGTCTACT
AGTTTTTGTCTCCCGAAACAGCACATCATTTGGGGCAAGATCAGAGTAGTTGTTGATTCCTGTAACCAATTGTGCAGCGT
CAGTTTCCACAATGGCATCTGATGCCCAACTCCTGAGGACTCTCCATGGCATGGATGCATGCCTCTGCTTCAGTCCGTAG
AGTACTAGGCCCCAACGACCATCAGAAGATTCAGGATTAAAACACCCATGAGAGTTGATTTTGAGCACACCCGGTGCTGG
TTTTTCCCCACGCATGATCAGCCACATAATTTATTCACTGCTCATTGGTCGTTCCTCTCCTACAGGCTTCCTTTGATCAT
GCAAAGATGCGCAGGTATATTTGGGATACATGTATTTGGTAGTCTAGAATTTGTAATCCGTTTCCTACCTTATTTTCAGG
AGAGGCTTCTTGCTCTTCAAATACTCAATATATACTCGCCTTCGAGGCTCAATAATATATCCAACAACTATTCCATCAAA
TCCCTCTCTAGTCGTCACCCGCCGCTTTCGCCCCGCACCGCCCATGAGGCGGTCGGCCTCCTTGACCTGATGCCTTAGAG
AGTCTTTGATCCCGAGCCCTTATTCCGGGGTTTTTTTTTTGCTATCTCGCCGGTCATTTTGATCGGCGTTTTTTTTGGTT
TTTCGATCTATGCTTAATCGGTTTGCGTCGCCCATCGCCGCCATCGACACCCACAAGCCTCTACTCCAACACCGGTGCGA
CCGGCCGACTTCTTCTGCGACCTGGCGGCCTCGCGCGACAGGCGGCTCCTCACGGCTGTCGTCTGCATGCCGATCCGCCC
GCCGATCTACGTCGGCCGTCACCGTCCTGCTCC
>chr7A_1
CATATGTGAGTCCCCGCA--CTCGCAGATACATTTATCTAAACAACAAAAACTAGTAAATCGTACCGCGGAGCCTGTCAG
GCGGCCAAAAATGTTCCTGCTATCGGTGTTGGATTCCAGGAGTATGCTGTATATCTTCTTCGCTTCAAGGTACCCAATTT
CTACGGAACGAAAGGAGAACACAGGTACAGAATTAGATTCCACGCTCACATAATTATTACCAGCAGACTGCGGGACTAAG
GAGGATTGTTGTAGAAGCAAGTGGACGAGGGTTTTGCCGTGGGGATTTCGCCAAACTTACACAGACGCTGCGCAACCGAA
CCGAGAGCTAAGCCTGAGAGGGAGGAGTTACCTTCGAGCTCGAGGGTTTGGAGGTAGGGGTGGATGTCCCGCGGGAGGGA
GGAGAAGGCGGCGGCGAGGCGGGCGCGGATGGCGGCGAGGCGCTTCCGCCAGTCCTGCGGCACCCGCTTGCGGTCGACCA
GCCACTCCTGCAGGCGGGCGAAGGCGATGTCGATGGGGAGGCTGCGGATCTCCGCCGGGTCGCGCATGGCGGGCACCGGG
TCGGCGGATCGACGGC-GGGGGAGGGGGCGGGACGCCGGCCGGAGCTTTTCGGGAAGA---TGGGGAAGAAAGTATGGAC
TGCGAGTCTGATTTTTTTTTAGTGGGGCGAGTCTGGTTTGCAGCCTTGCAGATTTTGGTTTACGGGAAGCTAGTGGGCCA
GATTAGTGGTCTTGGGTCTCTTCTGCTTATTCTGATGGGCTGCTGCTGGGCCGGCCGGAGGACAGGATTCCGGTTCGCGT
AGACGGCACGCGGGG-CAG-GGGTGGGTCCC-CCCGTCAGTGAGACAGAGACAAAGGAGAATCCGAAGAAATAAATATTC
AGGGCACGCCATCCCGTAGAGCACGGATAAT-AAAGAGTCGGCCGTCTTCTTTCCTCGGACTCCCCAGCAATCCCCATCT
T---CCCCTCCAAGCTT-CCGATCTTCCCTCTCGCCTGCCGCTGCCGAGATGACGGTGGAGAAGATCGACGCGACGGTGG
CCGACTTCGACGGCCACTTCGAGAGGCTCTTCGCCGGCGACGACGGCGGCAAGCTGAAGCTGCTGCTCTTCCTCGCCGAC
CGCGAGCCCTCCTCCTCCCTCACCTGGTGCCCCGGTAACCCATCTGCTACTTTTCCTTAAGTATCAAATT-----ATGAA
ACCCAACCCCTGCTGGCTGATCC-AAAGCGGATTTGGGCGGCGTGCGTGCGTGCAGATTGCAACGTGGCGGAGCCGGTGA
TCTACGAGAAGCTGGAGTCGCTGGGCAAGGACGTGGTGCTCCTGCGCGCGTTCGTCGGCGACAAGCCCACGTGGAGGGAC
CCGGCCCACCCGTGGAGGGTGGACCCGCGGTTCGCGCTCAAGGGCGTGCCGACGGTGCTGCGGTGGGACAAGGGCGCCGC
CGCCGGCCGCCTCGAGGACGACGAGGCCAACGTCGGGGACAAGATCGATGCCCTGCTCAATTGAGTGGTGAATTATTATG
TGCTGACCGCCAGTATCGTCTGCTTAATCCAAGTGCCAATAGAATGCTTTTGCTTTGGCGGCAGATGTTAGCTATCTGAA
GTC--GTGCTGTTCTTCTAACCAGTCAGCTTGAGCCATGAACCAAATAAAACAGGGGAACACTTGAACTCAATGTCTACT
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>chr7D_1
CATATGTCAACCCCCATG--CTCGCAGGTACATTTATCTAAACAACAAA--TTAGTAAATCGTACCGCGGAGCCTGTCAG
GCGGCCAAAAATGTTCCTGCTATCGGTGTTGGATTCCAGGAGTATGCTGTATATCTTCTTTGCCTCAAGGTACCCAATTT
CTACCGGACGAAAGGAGAACACAAGTATAGAATTAGATTCCACGCATACAGAAATA------GTGGGCTGCGGAACTAAG
GACACTCGTAAAAGTGACTAGG---CGAGGGTTTCGCCGTGGGGATTTCGCCAAACTTATACAGACGCTGCGCAACCGAA
CCGAGAGCTAAGCCTGAGAGGGAGGGGTTACCTTCGAGCTCGAGGGTTTGGAGGTAGGGGTGGAGGTCCCGCGGGAGGGA
GGAGAAGGCGGCGGCGAGGCGGGCGCGGATGGCGGCAAGGCGCTTCCGCCAGTCCTGCGGCACCCGCTTTCGGTCGACCA
GCCACTCCTGCAGGCGGGCGAAGGCGATGTCGATGGGGAGGCTGCGGATCTCCGCCGGGTCGCGCATGACGGCCACTGGG
TCGGCGGATCGACAGC--GGGGAGGGGGCGGGACGCCGGCCGGAGCTTTTCGGGAAGA---TGGGGACGAAAGCATGAAC
TG-----------TTTTTTTAGTGGAGCGAGTCTGATTTGCAGCGTTGCAGAATTTGGCTTACGCGAACCTAGTGGGCCA
GAT----GGTCTTGGGTCTCTTCTGCTTATGCTAATGGGCTGCTGCTGGGCCGGCCGGAGGACGAGATTCCGGTTCGCGT
AGACGGCACGCGGGG-CGATGGGTGGGTCCGACCCGTCAGTGAGACAGAGACAGAGGAGAATCCGAAGAAATAAATATTC
AGGGCACGCCATCCCGTAGACCGCGG-TAATAAAAGAGTCGGCCGTCTTCTTTCCTCGGACTCCCCAGCAATCCCCATCT
TCCCCCCCTCCAAGCTT-CCAATCTTCCTTCTCGCCTGTCGCTGCCGAGATGACGGTGGAGAAGGTCGACGCGACGGTGG
CCGACTTCGACGGCCACTTCGAGAGGCTCTTCGCCAGCGACGACGGCGGCAAGCTGAAGCTGCTGCTCTTCCTCGCCGAC
CGCGAGCCCTCCTCCTCCCTCACCTGGTGCCCCGGTAACCTACCCATCCCC-TTCCCCAAGTATCGAATT-----ATTAA
ACACGACCCCTGCTGGCTGATCCAAAAGCGGATTCGGGCGG----CGTGCGTGCAGACTGCAACGTGGCGGAGCCGGTGA
TCTACGAGAAGCTGGAGTCGCTGGGCAAGGACGTGGTGCTCCTGCGCGCGTTCGTCGGCGACAAGCCCACGTGGAGGGAC
CCCACCCACCCGTGGAGGGTGGACCCGCGGTTCGCGCTCAAGGGCGTGCCGACGCTGCTGCGGTGGGACAAGGGCGCCGC
CGCGGGCCGCCTCGAGGACGACGAGGCCAACGTCGGGGCCAAGATCGATGCCCTGCTCAATTGAGTCGTTAATTATGCGC
TGAGGG----CAGTCTCGTCTACTTAATCCAAGTGCCAAGAGAATGC-TTTG-----GCGGCAGATGTTATCTATCTGAA
ATC--GTGCTGTTATTGTAACCAGTCAGTTCG-----TGAACCAAATAAAACAGGGGAAC--------------------
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>SNPs
--------------S---SS--------------------------------------S---------------------
------------------------S-------------------------------------------------------
------------------------------------------------------------S-------------S----S
-----------------------------------------------------------S-----S--------------
-----S-------------------------------------------------------S------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------S-----
----------------S-----------------------------------------SSS-------------------
----------------------------------------------------S---------------------------
------------S------S-----------------------S-------------------S---------S------
---------------S---S-S--------S-S-------------------S---------------------------
------------------------------------------------------------------S-------------
-----------------S--------------------------------------------------------------
----------------------S-S------------------S------------------------------------
--S-----S-------------------------------------------------------SSS-S-SSSSS-----
-------S------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
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------S-----------------------------------------S-----------------SSS-S--S---S--
---S-------SS-----------------S-------------------------------------------SSSSSS
-SSSS-----S------------------S-S--S-------------------------S-S-S---S-----------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_619
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---------------------------------------CCGGAGCTTTTCGGGAAGAA---------------------
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>reverse_2248
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-------GATCCCGAGCCCTTATTCCG-----------------------------------------------------
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