>input_sequence_78541
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--------------------------------ATGG------------TTCTGCAATCCATG---AG---CAACGATCAT
CATCCATCGCTGCTCCTTGATGGCTTCCCTACTTTCTGCCCTGCCTTGCCCCTAATATCGCCGCCACCACCACCGGAGAA
TGGCACTGACTGTCATGATGCCATCCAGCTATCACAGATGCTGGCCGCGGATGAGCAAGGAGCGGTGGCTCATCATCAGC
AAGATCCGAGCACCGTTAGTAAGAAGAGAGAGGAACGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGG
AAGTAAGTCTGAATTAAT-TTTTCATTTGACAACTCTTCT---TACAGACAAAAAAGG-CAATTGATGCGAG-------T
TTGAATTCGAATTTGAAACAATTTTGCAGGTTCTGCAAGCAGATCATGTACGCGTCCCGAAAAGCAAGGGCGGACACACG
AAAGCGAGTCAAGGGCAGATTCGCCAAGGCTACCAATGAACACCAACACATACTACACCCAGATGCAGCATAA-------
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>chr5A_1_TraesCS5A01G336200
TGTGGTGCCAAGCTTG-ATCTTTATC----------CAACTAACTGACTAACTGACTGACAGTACCTTCTAATCACTATT
GAACGC--AT--GTTAGTTAGTTTGACTGTATACATCACATAAAAAGCAAAAATGAGTTCTAG-AAAAATT-----ACAC
AGATA-CTACAGAACGAGTGAAGCCTCAAGA-AACAAAAGGCACACCTGAAGGGGTTTTTTC--TTAACAAAATGTACTA
--------ACTTGAGTATGAAAAATGTGCAATTGCAATCTTGCTTTTTCAAGGAAA-ACAGGGGACTGCTAAAT------
-ATGGATCG-AGGCTAAGTATCGATCTTCCAAGTTAAAAATCTGAAAAATAACTTTCATTTA-GTAATGGAGTATAT---
-GGTAAAAGAAAGGATGTCTTTCTCTAGTCGAGCGAATTGTACAGAGGTAATTATAAATGAATCGTCTAAAAAACTTCAT
TTTTA----GCACA----CAAAGCCAAC-AAT-GCTAGCT-ACAAG----TGCCAAGATGGCTTCCGCCGCCTCGATGAA
TCGACGGCTAATTACGATTGAATATCTC--TCT--TACCTCTTAACTAGGATGGCGCATGAGTACTCATTGTGTTAATTT
GTGGTG----CTCTCACTACATTCATGGAGGATGGATCTCAGATCTGTGATGCGAGTGG---CACGACAACAATAGTAGG
AGATCAAAGAGGCCCCAGCAGCAGTAGCTTCGTCTGTGATGATTGGAACAATGGCTGCTCAAC-----------------
-TACCTGTGCTCCACAATGTTCTGTGCTTGAGAATAC--CAATGGAGTACTTGTTGGTCATCACTTAGCTGGGCCTTCAC
TCACTTTTGAGGTACATACATACACAC--------CACTCATT-------------------------------------
--------------------------------------------------------CGCTCACTCACACTGC-TAATTAA
CACAACTAATTTGCATCCCAG------TTATTTGGCAATGACAAATTACATTG----CTTGGTTT----------AATTT
CTTGGCAGCAACAGCAGCAGCTGCCACCGTCAATCTGCCACA---TCTCATCATCA-----------TACTCATCTTATA
ACCCATCGACATTGTCG---TGCCAGCCGGCCATGG------------TTCTGCAATCCATG---AG---CAACGATCAT
CATCCATCGCTGCTCCTTGATGGCTTCCCTACTTTCTGCCCTGCCTTGCCCCTAATATCGCCGCCACCACCACCGGAGAA
TGGCACTGACTGTCATGATGCCATCCAGCTATCACAGATGCTGGCCGCGGATGAGCAAGGAGCGGTGGCTCATCATCAGC
AAGATCCGAGCACCGTTAGTAAGAAGAGAGAGGAACGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGG
AAGTAAGTCTGAATTAAT-TTTTCATTTGACAACTCTTCT---TACAGACAAAAAAGG-CAATTGATGCGAG-------T
TTGAATTCGAATTTGAAACAATTTTGCAGGTTCTGCAAGCAGATCATGTACGCGTCCCGAAAAGCAAGGGCGGACACACG
AAAGCGAGTCAAGGGCAGATTCGCCAAGGCTACCAATGAACACCAACACATACTACACCCAGATGCAGCATAAATTCACG
ATTGATTAGATCAGATCGATCCTTTTTCTTTCTTTTCCCTTTTTTGC--ATATTACATTCCTTGTGCATATAGACAGTGC
ATATACACAAAAATCA------------------------------------------TGTCTCAACACATTACAGTCAG
TCATGCCTAGGTAGACCACTGTTCTCCACAGCACACAAATACATACCTTTAGCCCCTTTCTCAG---TTTTTTTGCCATT
TTTCTTTCCTTTTTTGATAGTTTGGGGCTCATTCCTTTTAGAGA--TAGTTTTGGGATGCATTCTTTTTAGGGAGGTACT
TCTGGTAACTGGTACCAAGATGTAATAATTCAGCCATTGTCTATGTGTACATACATAATAATCTCTTAAGCCCGGATAAA
TAAAATCATGTATTTTCATGCATTGCCAATGCTTGTATTCTCTGAAACTGCTGGTTCTTCAAAAAGATAAACAAGTGGCG
--GTGTGCATGCCTGTGATGTAAATAAAAAA---TGGCTTTTTTCATATATGTTTATATTCTAGGGTTTTTATCACTTAT
GCCACTAGTTGTGTCCCACTGCTCAATTTTGCCACTAAAAGTTACAACTGCTCAAAAATGTCATCGTACCGTGAGATGCT
TGCTCGAAAATGC-ATTAGATATCTAAAAAAA-TCACCGTTCCGTTAGATGTTTGCTCAAAAATGCCATTGGACATAGTT
ATTGTCAGGTCAAACCCGTTGGCCATGTTATATGACAAAAATATCCATAGACCCACATTTATGTTCTTTCTATCTCACAA
TCATATGTAT-GGGCCCCACTTGTAA-GAGTAAGCAAGCGAGCAATTTTACAGGAAAATAAAAACGTTGTTGGGATCAAG
TGAGACCCAT--ACTTTATTGTAGTGAGATAAAGGGAGAGCTGACATGTTGGTCCATAGATATTTATGTCATTATAATAG
GGTAAACGAGATTTGAGCTAGCAGTAATGGTGTATGGTGGAATTTTTGAGCATGCACCTAACGAAGCGATGGCATTTTTT
AGCACTTGAAATT
>chr5A_1
TGTGGTGCCAAGCTTG-ATCTTTATC----------CAACTAACTGATTAACTGATTCACAGTACCTTCTAATCACTATT
GAATGC--ATATGTTAGTTAGTTTGACTGTATACACCACACAAAAAGCAAAAAG-----------AAA---ATTAGACAG
ACACTCCTACAGAACCAGTGAACCCTCAAGA-CACAAAAGGCACACCTGAA-GGATTTTTCC--TTAACAAAATGTAGTA
TTTTGACTATTTGAGTATGAAAAATGTGCAGTTGCAATCTTGCTTTTTCAATGAAA-ATAGGGGACTGCTACATACTCAA
TATGGATCGGAGGCTAATTATCGA-CTTCCAAGTAAAAAAAATG-AAAATAACTTTCATTTA-GTAATA-----------
----------------------------------------------------TATAACTGAACCAACTAAAAACCTTCCT
TCTTTTCTGGCACA----CAAAGCCAAC-AAT-GCTAGCTTATAAG----TGCCAAGATAGGTTTCACTGCCTCGATGAA
TCGACAGGTAATTACGATTGAATATCTC--TCT--TACCGATTAAGTAGGATGGTGCATGAGT-----------------
--GGTG----CTCTCAATACATTCATGGAGGATGGATCTCAAATCTGCGTTGCGAATGG---GACAACAACAATAGTAGG
AGATCAAAGAGGCACCAGCACCAGCAACTTCAGCTGTGATGGTTGGAACAATGCCTGCTCAACTACCTGTGCTCCACAAT
GT------------------TCTGGGCTTGAGAATACTATAATGGAGTATTTGTTGGTCATCACTCAGCTGGACCTTCAC
TTACTTTTGAGGTACATACATACTTACTTCCTCCATTTCAAATTACTCGTCACAGAAATGGATGTATCTAGAACTAAAAT
ACATCTAGATACATCCATACCTGCGACAAGTAATTCGGAACGGAGGGAGTACATACCGCTCACTCGCACTGC-TAATTAA
CACAATTAATTTGCATCCCAG------TTATTTGACAAAGACAG-TAACATTG----CTTGGCGG---------------
-----------CAACAGCAGCTGCCACCATCGATCTTCCACA---TCTTATCATCATCATACATTCATACTCATCTTATA
ACCCATCCACATCGTCG---TGCCAGCCGGTCATGACATCGACTACTCTTCTACAATCCATG---GG---CAACGATTAT
TATACA--------------------------------------------------------------------------
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-----------------------------------------------GACATAAAAGT-------ATGCGAG-------T
TTGAATTTGAATTTGAAACAATGTTGCAGGTTCTGCAAGCAGATCATGTACGCATCCCGAAAAGCGAGTGCGGACACGCG
AAAGCGAATTAAGGGCAGATTCGCCAAGGCTACCAATGAACACCAACACATACTACACTCAGATGCAGCATAAATTCACG
ATTGAATAGATCAGATAGATCCTTTTCTTATTTTTTCTCTTTTTTATATAT-----ATTCCTTTTGCATATAGACAGTGC
ATATAGACAAAAATCA----------------------------------------------------------------
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>chr5B_1
TGTGGTACCAAGCTTG-ATCTTTATATCCA----------------ACTAACTGACTGACAGTACCTTCTAATCACTATT
GAACGC--AT--GTTAGTTAGTTTGACTGTATACATCACATAAAAAGCAAAAATGAGTTCTAG-AAAAATT-----ACAC
AGATA-CTACAGAACCAGTGAACCCTCAAGA-AACAAAAGGCACACCTGAAGGGTTTTTTTC--TTAACAAAATGTACTA
--------ACTTGAGTATGAAAAATGTGCAATTGCAATCTTGCTTTTTCAAGGAAA-ACAGGGGACTGTTAAAT------
-ATGGATCG-AGACTAAGTATCGATCTTCCAAGTTAAAAATCTGAAAAATAACTTTCATTTG-GTAATGGAGTATAT---
-GGTAAAAGAAAGGATGTCTTTCTCTAGTTGAGCGAATTGTACAAAGG------TAAATGAATCGTCTAAAAACCTTCAT
TTTTA----GCGCA----TAAAGCCAACAAAT-GCAAGCT-ACAAG----TCCCAAGATGGTTTCCGCCGCCTCGATGAA
TCGACGGCTAATTACGATTGAATATCTC--TCT--TACCTCTTAACTAGGATGGCGCATGAGTACTCATTGTGTTAATTT
GTGGTG----CTCTCACTACATTCATGGAGGATGGATCTCAGATCTGCGATGCGAGTGG---CACAACAACAATAGTAGG
AGATCAAAGAGGCCCCAACAGCAGTAGCTTCGTCTGTGATGATTGGAACAATGGCTGCTCAACTACCTGTGCTCCACAAT
GT------------------TCTGTGCTTGAGAATAC--TAATGGAGTACTTGTTGGTCATCACTTAGCTGGGCCTTCAC
TCACTTTTGAGGTACATACATACATAC--------CACTCATT-------------------------------------
--------------------------------------------------------CGCTCACTCACACTGC-TAATTAA
CAAAATTAATTTGCATCCCAG------TTATTTGGCAATGACAAATAACATTG----CTTGGTTT----------AATTT
CTTGGCAGCAACAGCAGCAGCTGCCACCGTCAATCTGCCACA---TCTCA--------------------TCATCTTACA
ACCCATCAACATTATCG---TGCCAGCCGGCCATGACATCGACTACTCTTCTGCAATCCATG---GG---CAACGATCAT
CATCCATCGCTGCTCCTTGATGACTTCCCTACTTTCTACCCTGCCTTGCCCCTAATATCGCCGCCACCACCACCGGAGAA
TGGCACTGACTGTCATCATGCCAACCGGCCATCACAGATGCTGACCGCGGATGAGCAAGCAGCGGTGGCTCATCATCAGC
AAGATCCGAGCACCATTAGTAAGAAGAGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGG
AAGTAAGTCTGAATTAAT-TTATCATTTGACAACTCTTCTATATACGGACAAAAAAAG-CAATTGATG------------
-TGAATTTGAATTTGAAACAATTTTGCAGGTTCTGCAAGCAGATCATGTATGCGTCCCGAAAAGCAAGGGCGGACACGCG
AAAGCGAGTCAAGGGCAGATTCGCCAAGGCTACCAATGAACACCAACATGTACTACACCCAGATGCAGCATAAATTCACG
GTTGATTAGATCTGATCGATCCTTTTTCTTTCTTTTCCCTTTTTTAC--AT-----ATTCCTTTAGCATATAGACAGTGC
ATATACACAAAAATCAAACATTTTTTAGTTGCATCATCATTTTTTTCTGTGTAAATAATGTCTCAACACATTACAGTCAG
TCATGCCTAGGTAGACCACTCTTCTCCACAGCACACAAATACATACCTTTAGCCCCTTTCTCAGTTTTTTTTTTGCCATT
TTTCTTTCCCTTTTTGATAGTTTGGGGCTCATTCCTTTTAGAGAGATAGTTTTGGGATGCATTCCTTTTAGGGGGGTACT
TATGGTAACTGGTACCAAGATGTAATAATTCAGCCAC-------------------------------------GATAAA
TAAAATCATGTATTTTCATGCATTGCTAGTGCTTGTATTCTCTGAAACTGCTGGTTCTTCAAAAAGATAAACAAGTGGCG
GTGTGTGCATGCCTGCGATGTGAATCAAAAAA-TTGGCTTTTTTCATATATGTTTATATT--------------------
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>chr7D_1
TGTGGTGCCAAGCTTGGATCTTTGTC----------TGACTGATA-------TGACTGAGATTATCTTCTAATCGCTATT
TAACGCATAT--GTTGGTTAGTTTGACTGTATAAACCACACAAAAGAGCCAAAAAAACTAGATAAAAA---TGCAGACAC
ATATG-CTACAGAACCAGTGAGAAGCCTGAACAACAAAAAGCACGCCTGAAGGGGTTTTTTTTTTTTACAAAATGTGGTA
--------ATTTGAGCATGAAAAATGTGCTGTTGCAGTCTAGCTCTTTCAAGGAAA-ACAGGGGACTGCTACATACTTCA
TATGGGCGG-AGGCTAATTGTCAATCTTCCAATTCAGGAATCTG-AAAATAACTTTCATTTA-GTAATGGAGTATAT---
-GATAG-AGAAATTATGCCTTTCCCTAATTGAGAAAATTGTACAGGC------ATAACTGAATCAACTAAAAACCTTCCA
TCATTTCTAGCACACAATTAAAGCCAAC-AAT-GCTAGCT-ACAAGTGCATGCCAAGATAGCTTTCGCTGCCTCGAGGAA
TTGACGGCTAATTACGATTGAATATCTCTTTCT--TACCTCTTAACTAGGATGGCGCATGAGTACTCATTCTGTTAATTT
GTCGTGCACTCTCTCAATACATTCATGCAGGATGGACCTCAGATATGCGATGCCAGTGGAACAACAACAACAATAGTAGG
AGATCAAAGAGGCACCAGCAGCAGCAGCTTCGGCTGTGATGATTGGAGCAATGCCTGCTCAAC-----------------
-T------------------TCTGGGCTTGAGAATAC--TAATGGAGTATTTGTTGGAAATCACTCAGCTGGGCCTTCAC
TCCCTTTTGAGGTACATATACACATACAGACCACTCACTCCCT-------------------------------------
--------------------------------------------------------CATGCAATCGCAGTGC-TAATTAG
CACAATTAATTATTTGCAACCCAGTTATTATTCGACGATCACAA-TAACATTGCGAACTTGGTTT----------AATTT
CTTCACAGCAACAGCAGCACCTGCCACCATCGATCTGCCAATTCCTCTCATCATCA-----------TACTCATGTTATA
ATCCATCCTCC---TCATCATGCCAGCCGGTCATGACATCGACTACTCTTCTCCAATCCATG---GGAGGCAACGATCAC
CATCCGTCTTATCTCCTCGATGGCTTCCCTACTTTCTGCCCTTCCATGCCCCTAATGTCGCCACCGCCACCACCGGAGAA
CGGCACCAGCTGTCATGACGCCAACCAGCCATCGCAGATGCTGGCCACGGATGAGCAAGCGGCGGCGGCTCATCACCAGC
AAGATCCAAGCACCATTGCTAAGAAGCGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGA
AAGTAAGTCTGAATTATTATTTTCAATTGACAACTCTTTAATATGCAGATGTTTTTTTTCAGTTGATTCGAGTTTGGGTT
TCAAATTTGAATTTTGATGAATTTTGCAGGTTCTGCAAGCAGATCATGTATGCCTCCCGCAAAGCGAGGGCAGACACGCG
GAAGCGGGTCAAGGGCAGATTCGCAAAGGCTAGCAATGAACACCAACACATACTACACTCAGATGCAGGATAAATTCACG
AGCGATTAGGTCGAT-------TTTTTCGTTCTTTTTCTCTTTT-TTC-------CATTCGTTTTACATATAGACAGTGC
ATATATACACAAAAA-----------------------------------------------------------------
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>chr4A_1
TGTGGTGCCAAGCTTGGATCTTTGTTTCACTGTGATTGACTGACA-------TGACTGAGATTATCTTCTAATCACTATT
GAACGCATAT--GTTGGTTAGTTTGACTGTATAAACCACACAAAAAAGCCAAAAAAATTCTAG-ATAAAAATGCAGACAC
ATATG-CTACAGAACCAGTGAGAAGCCTGAAGGG-----------------------TTTCTTTTTTACAAAATGTAGTC
--------ATTTGAGCATGAAGAATGTGCTTTTGCAGTCTAGCTTTTTCAAGGAAACACAGGGGACCGCTACATACTTCA
TATGGGTCG-AGGCTAATTGTCAATCTTCCAATTTAAGAATCTG-AAAATAACTTTCATTTA-GTAATGGAGTATATATA
TGATAG-AGAAATGATGCCTTTCCCTAATTGAGCAAATTGTACAGAC------ATAATTGAATCAACTAAAAACCTTCCA
TCGTTTCTACCACCCAATTAAAGCCAAC-AATAGCTAGCT-ACAAGTGCATGCCAAGATAGCTTTCGCTGCCTCGACGAA
TCGACGGCTAATTTCGAATGAATATCTC--TTTCCTACCTCTTAACTAGGATGGCGCATGAGTACTCATTCTGTTAATTT
GTGGTGCACTCTCTCAATACATTCATGGAGGATGAACCTCAGATAGACGATGCGAATGG---AACAACAACAATAGTAGG
AGATCAAAGGGGTACCAGCAGCAGCAGCTTCGGCTGTGATGATTGGAACAATGCCTGCTCAAC-----------------
-T------------------TCTGGGCTTGAGAATAC--TAATGGACAATTTGTTGGTCATCACTCAGCTGGACCTTCAC
TCAGTTTTGAGGTACATACATGA---------------------------------------------------------
-------------------------------------------------TACATATTACTAACTCACACTAAATAATTTG
GATAATTCATTTGCATTCCGG------TTATTCGACACTGACAA-TACCAACTAATTACCACTTTTCTTGGTATAAATTT
CTTGGCAGCAACAGCAGCAGCTGCCACCGTCGATCTGCCACATCCTCTCATCATCA-----------TTCTCATGTTATA
ATCCATCCTCC---TCG---TGCCAGCCGGTCATGACATCGACTACTCTTCTGCAGTCCATGGGAGG---CAACGATCAC
CATCCATCGCTGCTCCTCGATGGCTTCCCTACATTCTGCCCTTCCATGCCCCTAATGTCGCCGCCGCCACTACCGGAGAA
CGGCACCGGCTGTCATGATGCCAACCAGCCATCGCAGATGCTGGCAACGGATGAGCAAGTTGCGGCTGCTCATCACCAGC
AAGATCCAAGCACCATTGCTAAGAAGCGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGA
AAGTAAGTCTGACTTATTATTTTCATTTGACAACTACTTTATTTGCAGATTCC-TTTTTCAATTGATGTGAGCTTGAGTT
TCAAATTTGAATTTCGATGTATTTTGCAGGTTCTGCAAGCAGATCATGTATGCCTCCCGCAAAGCGAGAGCGGACACACG
GAAGCGGGTCAAGGGCAGATTCGCAAAGGCTAGCAACGAACACCAACACATACTACACTCAGATGCAGGATAAATTCACG
AGCGACTAGGCCGAT-------TTTTTCGTTCTTTTTCTCTTTTTTTC-------CATTCGTTTTGCATATAGACAATGC
ATATATACACAAAAA-----------------------------------------------------------------
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>chr5D_51
-------------------------------------------------------------GTACCTTCTAATCACAATT
GAACGCATAT--GTTAGTTAGTTTGGCTGTATACATCACATAAAAAGCAAAAATGAATTCTAG-AAAA---ATTAGACAC
GGATA-CTACAGAACCAGTGAACCCTCAAGA-AACAAAAGGCACACCTGAAGGGTTTCTTTC--TTTACAAAATGTAGTA
--------ACTTGAGTATGAAAAATGTGCAATTGCAATCTTGCCTTTTCAAGGAAA-ACAGGGGACTGCTAAAT------
-ATGGATCG-AGGCTAAGTATCGATCTTCCAAGTTAAAAATCTGAAAAATAACTTTCATTTAAGTAATGGAGTATAT---
-GGTAAAAGAAAGGATGTCTTTCTCTAGTTGAGTGAATTGTACAGAGGTAATTATAAATGAATCGTCTAAAAACCTTCAT
TGTTA----GCACA----CAAAGCCAAC-AAT-GCTAGCT-ACAAGTGC----CAAGATGGCTTCCGCCGCCTCGATGAA
TCGACGGCTAATTACGATTGAATATCTC--TCT--TACCTCTTAACTAGGATGGCGCATGAGTACTCATTGTGTTAATTT
GTGGTG----CTCTCACTACATTCATGGAGGATGGATCTCAGATCTACGATGCGAGTGG---CACAACAACAATAGTAGG
AGATCAAAGAGGCCCCAGCAGCAGTAGCTTCGTCTGTGATGATTGGAACAATGGCTGCTCAACTACCTGTGCTCCACAAT
GT------------------TCTGTGCTTGAGAATAC--TAATGGAGTACTTGTTGGTCATCACTTAGCTGGGCCTTCAC
TCACTTTTGAGGTACATACATACATAC--------CACTCATT-------------------------------------
--------------------------------------------------------CGCTCACTCACACTGC-TAATTAA
CAAAATTAATTTGCATCCCAG------TTATTTGGCAATGACAAATAACATTG----CTTGGTTT----------AATTT
CTTGGCAGCAACAGCAGCAGCTGCCACCGTCAATCTGCCACA---TCTCA--------------------TCATCTTACA
ACCCATCAACATTATCG---TGCCAGCCGACCATGACATCGACTACTCTTCTGCAATCCATG---GG---CAACGATCAT
CATCCATCGCTGCTCCTTGATGACTTCCCTACTTTCTACCCTGCCTTGCCCCTAATATCGCCGCCGCCACCACCGGAGAA
TGGCACTGGCTGTCATGATGCCAACCAGCCATCACAGATGCTGACCGCAGATGAGCAAGCAGCGGTGGCTCATCATCAGC
AAGATCCGAGCACCGTTAGTAAGAAGAGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGG
AAGTAAGTCTGGATTAAT-TTTTCATTTGACAACTCTTCTATATACAGACAAAAAATG-CAATTGATGCGAG-------T
ATGAATTTGAATTTGAAACAATTTTGCAGGTTCTGCAAGCAGATCATGTACGCGTCCCGAAAAGCAAGGGCGGACACACG
AAAGCGAGTCAAGGGCAGATTCGCCAAGGCTACCAATGAGCACCAACACATACTACACTCAGATGCAGCATAAATTCACG
ATTGATTAGATCAGATCGATCCTTTTTCTTTCTTTTCCCTTTTTTTCT--T-----ATTCCTTTTGCATATAGACAGTGC
ATATACACAAAAATCAAA----------------CATCATTTTTTTCTGTGTAAATAATGTCTCAACACATTACAGTCAG
TCATGCCTAGGTAGACCACTCTTCTCCACAGCACACAAATACATACCTTTAGCCCCTTTCTCAGTTTTTTT---GCCATT
TTTCTTCCCTTTTTTGATAGTTTGGGGCTCATTCCTTTTAGAGAGATAGTTTTGGGATGCATTCTTTTTAGGGAGGTACT
TATGGTAACTGGTACCAAGATGTAATAATTCAGCCATTGTCTATGTGTACATACATAATAATCTCTTAAGCCTGGATAAA
TAAAATCATGTATTTTCATGCATTGCTAATGCTTGTATTCTCTGAAACTGCTGGTTCTTCAAAAAGATAAACAAGTGGCG
--GTGTGCATGCCTGCGATGTGAATCAAAAAAATTGGCTTTTTTCATATATGTTTAT-----------------------
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>chrUn_158
GAAACCCAAAAAAAAAAACACAG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTGAAGGA-----------------------TTTCCTTTTTACAAAATGTAGTC
--------ATTTGAGAATGAAAAATGTGCAGTTGCAATCTAGCTTTTTCAAGGAGA-ACAGGGGACTGCTACATACTTCA
AATGGGTCG-AGGCTAATTGTCAATCTTCCAATTTAAGAATCTG-AAAATAACTTTCATTTA-GTAATGGAGTATAT---
-GATGG-AGAAATGATGTCTTTCCCTAATTGAGAAAATTGTACAGAC------ATAATTGAATCAACTAAAAACCTTCCA
TCATTTCTAGCACACAATTAAAGCCAAC-AA---------------TGCTTGCCAAGATAGCTTTCGCTGCCTCGAGGAA
TCGAAGGCTAATTCCGATTGAATATCTCTTTCT--TACTTCTTAACTAGGATGGCGCATGAGTACTCATTCTGTTAATTT
GTCGTGCACTCTCTCAATACATTCATGGAGGATGGACCTCAGATATGCGATGCGAGTGGAACAACAACAACAATAGTAGG
AGATCAAAGAGGCACCAGCAACAGCAGCTTCGGCTGTGATGATTGGAGCAATGCCTGCTCAAC-----------------
-T------------------TCTGGGCTTGAGAATAC--TAATGGAGTATTTGTTGGTCATCACTCAGCTGGGCCTTCAC
TCCCTTTTGAGGTACATATACACATACAGACCACTCACTCACT-------------------------------------
--------------------------------------------------------CATTCAATCGCAGTGC-TAATTAG
CACAATTAATTATTTGCAACCCAGTTATTATTCGACGATCACAA-TAACATTGCGAACTTGGTTT----------AATTT
CTTGACAGGAACAGCAGCAGCTGCCACCATCGATCTGCCAATTCCTCTCATCATCA-----------TACTCATGTTATA
ATCCATCCTCC---TCGTCATGCCAGCCGGTCATGACATCGACCACTCTTCTCCAATCCATG---GGAGGCAACGATCAC
CATCCGTCTTATCTCCTCGATGGCTTCCCTACTTTCTGCCCTTCCATGCCCCTAATGTCGCCACAGCCACCACCGGAGAA
CGGCACCAGCTGTCATGACGCCAACCAGCCATCGCAGATGCTGGCCACGGATGAGCAAGCGGCGGCGGCTCATCACCAGC
AAGATCCAAGCACCATTGCTAAGAAGCGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGA
AAGTAAGTCTAAATTATTATTTTCATTTGACAACTCTTTTA---------------------------------------
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>chrUn_158
GAAACCCAAAAAAAAAAACACAG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTGAAGGA-----------------------TTTCCTTTTTACAAAATGTAGTC
--------ATTTGAGAATGAAAAATGTGCAGTTGCAATCTAGCTTTTTCAAGGAGA-ACAGGGGACTGCTACATACTTCA
AATGGGTCG-AGGCTAATTGTCAATCTTCCAATTTAAGAATCTG-AAAATAACTTTCATTTA-GTAATGGAGTATAT---
-GATGG-AGAAATGATGTCTTTCCCTAATTGAGAAAATTGTACAGAC------ATAATTGAATCAACTAAAAACCTTCCA
TCATTTCTAGCACACAATTAAAGCCAAC-AA---------------TGCTTGCCAAGATAGCTTTCGCTGCCTCGAGGAA
TCGAAGGCTAATTCCGATTGAATATCTCTTTCT--TACTTCTTAACTAGGATGGCGCATGAGTACTCATTCTGTTAATTT
GTCGTGCACTCTCTCAATACATTCATGGAGGATGGACCTCAGATATGCGATGCGAGTGGAACAACAACAACAATAGTAGG
AGATCAAAGAGGCACCAGCAACAGCAGCTTCGGCTGTGATGATTGGAGCAATGCCTGCTCAAC-----------------
-T------------------TCTGGGCTTGAGAATAC--TAATGGAGTATTTGTTGGTCATCACTCAGCTGGGCCTTCAC
TCCCTTTTGAGGTACATATACACATACAGACCACTCACTCACT-------------------------------------
--------------------------------------------------------CATTCAATCGCAGTGC-TAATTAG
CACAATTAATTATTTGCAACCCAGTTATTATTCGACGATCACAA-TAACATTGCGAACTTGGTTT----------AATTT
CTTGACAGGAACAGCAGCAGCTGCCACCATCGATCTGCCAATTCCTCTCATCATCA-----------TACTCATGTTATA
ATCCATCCTCC---TCGTCATGCCAGCCGGTCATGACATCGACCACTCTTCTCCAATCCATG---GGAGGCAACGATCAC
CATCCGTCTTATCTCCTCGATGGCTTCCCTACTTTCTGCCCTTCCATGCCCCTAATGTCGCCACAGCCACCACCGGAGAA
CGGCACCAGCTGTCATGACGCCAACCAGCCATCGCAGATGCTGGCCACGGATGAGCAAGCGGCGGCGGCTCATCACCAGC
AAGATCCAAGCACCATTGCTAAGAAGCGAGAGGAAAGGGACAGGGCCAAGCAAAGGTACAACGAGAAGAAGAAGAACAGA
AAGTAAGTCTAAATTATTATTTTCATTTGACAACTCTTTTA---------------------------------------
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>chr5B_917
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-----------CAACAGCAGCTGCCACCATCGATCTTCCACATCTTATCATCATCA-----------TACTCATCTTATA
ACCCATCCTCA---TCGTCGTGCCAGCCGGTCATGACATCAACTACCCTTCTGCAATCCATG---GG---CAACGATTAT
CATCCATCGCTGCTCCTCGATGGCTTCCCTACTTCCTGCCCTGCCTTGCCCCTAATATCACTGCCACCACCACCAGAGAA
CGGGCCTGGCTGTCATGATGCCAACCAGCCATCGCAGATGCTGGCCGCAGATGAGAAAGCAGCGGCGAATCCTCATCAGC
AAGATCCGAGCACCGTTAGTAAGAAGAGAGATGAAAGGGACAGAGCCAAGCAAAGGTACTACGAGAAGAAGAAAAACAGA
AAGTAAGTCTGAATTAAT-TTTTCATTTGACAACTCTTTTATA--CAGACAAAAAAGT-------ATGCGAG-------T
TCGAATTTGAATTTGAAACAATTTTGCAGGTTCTGCAAGCAGATCATGTACGCATCCTGAAAAGCGAGGACGGACGCGCG
AAAGCGAATTAAGGGCAGATTCGCCAAGGCTACCAATGAACACCAACACATACTACACCCAGATGCAGCATAAATTCACG
ATTGAATAGATCAGATAGATCTTTTTCTTAATTTTTCTCTTTTTTATA-AT-----ATTCCTTTTGCATATAGACAGTGC
ATATACACAAAAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_1979
TATT----------------------------------------------------------------------------
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----------------------------------------------------------TTTTAGGGTTTTTATCATTTAT
GCCACTAGTTGTGTCTCACTACTCAGTTTTGCCATTCAAAATTACAACTGCTCAAAAATGCCATCATTCTGTGAGATGCC
TGCTCAAAAATGCCAGTAGATATCTAAAAAATGTCATTGTTCCATTAGATATTTGCTC-AAAATGCCATTAGACATTGTT
ATCGTCAGATCAAACTCGTTGACCATGTTATATGACAAAAATTTCCCTATACCCACTAG-CAGTTCTCTCTATCTCACAA
TGATAAGTGT-GGACCCCACTTGTCAGGAGTAAGCAAGCGAATAATTTTAGAGGAAAATAAAAACGTTGTTGGGATCAAG
TGGGACCCAC--ACTTTATTGTAGTTAGATAGAGGGAGAGCTGACATGTTGGTATATATGTATTTTTGTCATCATAACAT
GGAAAACAAGATTTGAGATGACATTAATGGTATCAAGTGGCATTTTTTAGCATGCGCCTAACGAAGCAATGGCATTTTTG
AGCAGTTGAAATT
>chr3A_1983
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----------------------------------------------------------TTTTAGGGTTTTTATCATTTAT
GCCACTAGTTGTGTCTCACTACTCAGTTTTGCCATTAGAAATTATAACTACTTAAAAATGCCATCGATACGTGAGATGCT
TGCTCAAAAATGCCATTAGATATGTAAAAAATGCCATCGCTCCGTTAGATGTTTGCTCAAAAATGCCATTAGACATTGTT
ATTTTCACTTCAAACCCGTTGACCATGTTATATGACAAAAATAAGCCTAGACCCACATGTCAGTTATCTCTATCTCAAAA
TGATAAGTGT-GG-CCCCACTTGTCAGGAGTAACCAAGCGAATAATTTTACAGGATAATAAGAACGTTGTTGGGATCAAG
TAGGCCCCAC--ACTTTATAGTAGTGAGATAGA-GGAGAGCTGGCATGTTGGTCCATAGGTATTTATGTCATTATAACAT
GGCAAAAGAGATTTGAGATCACAATAATGGTGTCTAGTGGCATTTTTGAGCATGTGTCTAACGAAGCAATGGCATTTTTG
AGCGGTTGAAATT
>chr2A_1986
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-------------------------------------------------------------TAGGGTTTTTATCACTTAT
GCCACTAGTTATGTTCCACTACTCAGTTTTGCCATTAAAAGTTATAACTGCTCAAAAATGCCATCGTTCCGTGAGATGTT
TGCTTGAAAATGCCATTAGATATCTCAAAAATGCCATCATTCCGTTAGATGTTTGCTCAAAAATGCCATTGGACATCGTT
ATTTTCAGGTCAAACCCGTTGACCATGTTATTTGACAAAAATACCCCTAGACCTACATTTCAGTTCTTTCCATCTCACAA
CCATAAGTATGGG-CCCCACTTGTAAGGAGTAAGCAAGCGAGCAATTTTACAGGAAAATAAAAACGTTGTTGGGATCAAG
TGGGACCCAC--ACTTTATTGTAGCGAGATAGAGGGAGAGCTGACATGTTGGTGCATAGGTATTTATGTCATTATAATAG
GGTAAACAAGATTTGAGCTGACAGTAATGGTATCCGGTGGCATTTTTGAGCATACGCCTAATGAAGCGATGGCATTTTTG
AGCAGTTGAAATT
>chr6A_1986
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-------------------------------------------------------------TAGGGTTTTTATCATTTCT
GCCACTAGTTGTGTCCCACTACTCAGTTTTGTCATTAGAAATTACAACTACTCAAAAATGCCATCGATTCGTGAGATGCT
TGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCATTCCGTTAGATGTTTGCTCAAAAATGCCATTAGACACTACT
ATTTTCACGTCAAACCCGTCGACCATGTTATATGACAAAAATAAGCCTAGACCCACATGTCAGTTCTCTCTATCTCACAA
TGATAAGTGT-GG-CCCCACTTGTCAGGAGTAACCAAGCGAATAATTTTACAGGAAAATAAGAACGTTGTTGGGAACAAG
TGGACCCCAC--ACTTTATTGTAGTGAGATAGAGGGAGAGCTGGCATGTTGGTTCATAGGTATTTATGTCATTATAACAT
GGCAAAAGAGATTTGAGATCACAATAATGGTGTCCAGTGGCATTTTTGTGCATGTGTCTAACGAAGCAATGGCATTTTTG
AGCAGTTGAAATT
>chr3A_1987
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--------------------------------------------------------------AGGGTTTTTATCATTTAT
GCCACTAGTTGTGTCCCACTACTCAGTTTTGCCATTAGAAGCTACAACTGCTCAAAAATGCCATCAATCCATGAGATGCT
TGCTCAAAAATGTCATTAGATATCTAAAAAATGCCACCGTTCTGTTAGATGTTTGCTCAAAAATGCCATTAGACACTGTT
ATTTTTACGTCAAACCCGTTGACCATGTTCTATGACAAAAATAAACCTAGACCCACATGTCAGTTCTCTCTATCTCACAA
TGATATCTAT-GG-CCCCACTTGTCAGGAGTAACCAAGCGAATAATTTTTTAGGAAAATGAGAACGCTGTTGGGATCAAG
TGGGCCC--C--ACTTTATTGTAGTGAGATAAAGGGAGAGCTGGCATGTTGGTTCATAGGTGTTTATGTCATTATAACAT
GGCAAAAGAGGTTTGAGATCATAATAATGGTGTTTGGTGACATTTTTGAGCATGTGTCTAATGAAGCGATGGCATTTTTG
AGCCGTTGAAATT
>chr5A_1988
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---------------------------------------------------------------GGGGTTTTATCATTTCC
GCCACTAGTTGTGTCCCACTACTCAGTTTTGCCATTAGAAGTTACAACTACTCAAAAATGCCATCGATTCGTGAGATGCT
TGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCATTCCGTTAGATGTTTGCTCAAAAATGCCATTAGACACTGCT
ATTTTCACGTCAAACCCGTCGACCATGTTATATGACAAAAATAAGCCTAGACCCACATGTTAGTTCTCTCTATCTCACAA
TGATAAGTGT-GG-CCCCACTTGTCAGGAGTAACCAAGCGAATAATTTTACAGGAAAATAAGAACGTTGTTGGGAACAAG
TGAACCCCAC--ACTTTATTGTAGTGAGATAGAGGGAGAGATGGCATGTTGGTTCATAGGTATTTATGTCATTATAACAT
GGCAAAAGAGATTTGAGATCACAATAATGGTGTCCAGTGGCATTTTTGAGCATGTGTCTAACAAAGCGATGGCATTTTTG
AGCAGTTGAAATT
>chr6D_1988
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---------------------------------------------------------------GGGTTTTTATCATTTAT
GCCACTAGTTGTGTCCCACTGCTCAGTTTTGCCATTAGAAATTACAACTGCTAAAAAATGCCATCGTTCCGTGAGATGCT
TGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCGTTTCATTAGATGTTTGCTCAAAAATGCCATTAGACATCGTT
ATTGTCAGGTCAAACTCATTGACCATGTTATATGACAAAAATTCCCCTGTACCCACATGTCAGCTCTCTCTATCTCACAA
TGATAAGTGTGGA-CCCCACTTGTCAGGAGTAAGTAAGCGAATAATTTTAGAGGAAAATAAGAACGCTGTTGGGATCAAG
TGGTACC--CATACTTTATTGTAGTGAGATAGAGGGAGAGCTGACATGTTGGTCTATAGGTATTCTGGTCATTATAACAT
GGCAAACGAGATTTGAGCTGACAGTAAAGGTGTCCAGTGGCATTTTTTAGCATGCACCTAACGAAGCGATGGCATTTTTG
AGCTGTTGAAATT
>chr1D_1989
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----------------------------------------------------------------GGTTTTTATCATTTAT
GCCAGTAGTTGTGTCCCACTACTCAGTTTTACCATTAGAAGTTACAACTGCTCAAAAATGCCATCGATCCGTGAGATGCT
TGCTCAAAAATGCCATTAGATATCTCAAAAATGCCATCGTTCCGTTAGATGTTTGCTCAAAAATGCCATTAGACATTGTT
ATTTTCACGTCAAACCCGTTGACCGTGTTATATGACAAAAATAATCCTAGACCCACATGTCAGTTCTCTCTATCTCACAA
TGATATGTGT-GA-GCCTACTTGTCAGGAGTAACCAAGCGAATAATTTTACAGGAAAATAAGAACGTTGTTGGGATCAAG
TGGGCCC--CATACTTTATTGTAGTGAGATAGAGGGAGAACTTGCATGTTGGTTCATAGGTATTTATGTTATTATAGCAT
GGCAAAAGAGATTTGAGATCACAATAATGGTGTCCAGTGACATTTTTGAGCATGTGCCTAACAAAGCGATGGCATTTTTT
AGCAGTTGAAATT
>SNPs
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---------------S------S---------------------------------------------------------
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-----------------------------S-------------------------------------------S------
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-----------------------------------------------S-----------------S--------------
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--SSSSSSSSSSSSSSSSSS-------------------S----------------------------------------
------------------------S-------------------------------------------------------
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-----S----------------------------------------S---------------------------------
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-------S---------------------------S-----------------------------S--------------
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-----------------------S-----S-----------------------------S--------------------
-----------------------------------S--------------------------------------------
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-------S------------------------------------------------------------------------
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---------------------------------------------S-----SSSS--------S----------------
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--------------------S-----------------------------------------------------------
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-S----------------------------------------------------------------------S-------
--------------------------S-----------------------------------------------------
---------------S-----S---S----------------------------------S-------------------
-------------------------S--------S-------------------------S------S------------
-------------------------------S--------------------------------------------S---
---------------------S------------------------S-------------SS------------------
-------------S------------------------------------------------------------------
---------S-------------------------------------------------S--------------------
-------------------SS------------S------S---------------------------------------
----S--------
>forward_809
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---------------------------------------------------------------------TGGCTGCTCAA
CTACCTGTG-----------------------------------------------------------------------
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>reverse_2388
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-------------------------------------------------------------------ACCGTGAGATGCT
TGCTCG--------------------------------------------------------------------------
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