>input_sequence_78528
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-------------ATGGGTTCCATCAAGCGCAACTACAGCGGGTGGGCAGTCCTGCATGTTGTCGCCGGGATTCTTCTCG
TCGCAGGTGCTGTCATGGCGGAGGGGCGGTCGACGAGCTGCATCGCCCAATGCCCTAACCGGAAGGGCTTAACGGCCTGC
CTCTACCGCTGCTGGTTTGGCTGCACGCCTCTGCATCTTGATCTTGCCGACCAGGAGTCAACACAAGATGTTGTTCTCTT
GACAGCATCAGAGGCGGAGTGCGCGGCCTACTGCAAAACGCATGCCCGAGATTTGCCGGGCAAGTACAGCGCATGCATGG
TCATGTGCCGATCTAGGCCAGATGCCGCGGACGACAAGATCCTCCACATCAACGATGGG---AAGGAGGAGGAGATGCTA
CAAGAGGACGTCAAAGCTCAGCTTGGCACCACCGCCTGCGACGAGTGTGGAAATACGACAGAATTCATGGAGTACATGAG
CTGTCTAATCCGCAATAACTGTGATTAA----------------------------------------------------
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>chr7B_1_TraesCS7B01G492800
CTTAACAATGTGTCCATGTCTGTATCATGTTCAGACCTGCATGCTCTGTTAATTAATCATTAAAGTAGTGATCTAAATGC
TCTTATATTTCTTTACGGAGGGAGTATGTTAATTCTTGGCCGATGATATGTTCAAACTGTGTGGGCGCACTTCAGTGTTC
AGGCTTCTCTTAAATGGAAAGATCGATGTTCTCAAAATTAATGCACACAGAGAATCGGATATGTACTCTGAACAGACAAA
CCGAAGCTTCTTCAAATAA------TTGAAAGTTTTGAAGTTAATGGTTAACATATAATGTTTACGGTTGAAATCTTCTC
GTGCTTACAGTCTAGGACATCCTTCCAGGCCATGTATACAGGCTCCAACAACAGATAAGGTGGTGGATATC---------
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-----------------------------------------------------AAATCCATTTTTATTTTATGTATTTAT
TATTGTTGGCTACTCCCTCCGTCTAGGTTTATCAGGCCTGCCATAGTATGTTTTTCTAAGGCCCCTCTAGATATACGTGT
TTGCTTTCCTCGATCTCCTCCGCTGAACTCGCGCACGATTGGGCTGCTGCTTCCATTGAATCGCTGCATGTAGAAAAGTA
GCATGCAACCAGCTGTAGGCAATAACTACCT-------------------------------------------------
-----------------TTGGAATTCACAAGTGCCTATCAATAGTATTA-TTCCTTGGTCTTTCTGTTTTGGTCGATAGG
CCCAATAAACCCGGACGGAGGGAGTACTTCTCTAT---------------------------------------------
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-----------------------------------------------------------------------TGAAGCAAG
GGACAAGTGCATGTGGATCTACCTTCCCTATACATCCATTTCACTACAACCAAAATAAATTAAATGGAAGACGTTCGCCA
CGGGAAGCTAGCACGAT------GCACATTAATGGCAGTACACAGGACTACGATGCTCGTGCACATGCGTTGCATCTAGT
ATTCATGCACTTGTCCCCTCTTTCATCCATCCTCACTATATGAACTCCATACCGGTGGTGTACATTTCTCATTCCAAAGT
CACCA------------------------------------TAGTAGCTATAGCACACTAAGCTGCACCAAAAGAAGTAG
CTAGCCCACTGGCATGGGTTCCATCAAGCGCAACTACAGCGGGTGGGCAGTCCTGCATGTTGTCGCCGGGATTCTTCTCG
TCGCAGGTGCTGTCATGGCGGAGGGGCGGTCGACGAGCTGCATCGCCCAATGCCCTAACCGGAAGGGCTTAACGGCCTGC
CTCTACCGCTGCTGGTTTGGCTGCACGCCTCTGCATCTTGATCTTGCCGACCAGGAGTCAACACAAGATGTTGTTCTCTT
GACAGCATCAGAGGCGGAGTGCGCGGCCTACTGCAAAACGCATGCCCGAGATTTGCCGGGCAAGTACAGCGCATGCATGG
TCATGTGCCGATCTAGGCCAGATGCCGCGGACGACAAGATCCTCCACATCAACGATGGG---AAGGAGGAGGAGATGCTA
CAAGAGGACGTCAAAGCTCAGCTTGGCACCACCGCCTGCGACGAGTGTGGAAATACGACAGAATTCATGGAGTACATGAG
CTGTCTAATCCGCAATAACTGTGATTAATTAGCGCGTTTCTTCTTGCATACAATAGGGGCCGACATAGAGGATGCCATGG
TGTGCGGAACGGGCTTGCTGATCATGCGCCTGGAGTAATGGGATCCCATAGTGTGCACAATGGTGCGATCAAGTTGTTTG
CTTCCTATTTTGCATCGAATAAATATGGATCCGTTGATTCCTAACCAGTTCTTTTTTATTTCAAGACAAAGGA--CCCTT
CTTTGAGAAACAACAAGGAAATAAAAGAATGTATTGTTTTATCTTTCTTGCAAATTAGAATTTTAGACTTTGTTAACTAA
GATATTATGTATTATTGGTAGTGGACCTAACATATTGTATTCAGTGGAATTTATGTATGAAATGTAA---------TTGA
TGTGGTCTATGTTGCGCTGTCTATATTATGAATGAAAATTTTGTTGTTG--ATGTGGTATTGTTCATGTGCTCTGAAATG
TACAAAAATGAGTTGTAAAAGATGACGCGTGAGAGTATGTTGTCGAAGAGAACACATCACGTAGATAGCTAGTAGCCAGA
TCGATGCAAGTTGATACATACATACATACATAC--------ATACATATTC------------------------TTTGA
AACAAGTGGGCATATAGGATAAACTTGCACATGCATTCGGGCACAGGGAAAGCTTCGAGATGCCCCTGCAGATCCACGCC
CTGTATTACCAGCAAGCAAATAAACTTATACTTGACGGTGTCATCACCATGCGAGTACAACTAGCTCGATTAGTGCGGAC
AGTGCAGCCTCCTCCCAG---------------------------TGCATGTACATAAATACCACCAAAGTATGCCTATA
AACCGGAAAGGAGGGAGTATCCTGGAGGCAGCTGCATGCATGCTGTCAGTACTGTCTAGTAGGATGCCTAGAGTCAATGC
AAATTGAGCCTCATTGGGCAACTCTACTAAAGGCATCTCCAGCCGTTGGCCCCCCAGGGGGCGTCTAAAAGCGCCGCCTG
GGGGCGAGCCGGCGACACACTCGGCGCTAGGGGCGGTTTTGCGCCCAGTCGTCGCCCCCA
>chr7B_1
CTTAACAATGTGTCCATGTCTGTATCATGTTCAGACCTGCATGCTCTGTTAATTAATCACTAAAGTAGTGATCTAAATGC
TCTTATATTTCTTTACGGAGGGAGTATGTTAATTCTTGGCCGGTGATATGTTCAAACTGTGTGGGTGCACTTCAATGTTC
AGGCTTCTCTTAAATGGAAAGATCGATGTTCTCAAAATTAATACACACAGAGAATCGGATATGTACTCTGAAAAGACAAA
CCGAAGCTTCTTCAAATAA------TTGAAAGTTTTGAAGTTCATGGTTAACATGTAATGTTTACGATTGAAATCTTCTC
ATGCTTACAGTCTAGGACATCCTTCCAGGCCATGTATACAGGCTCCAACAACAGGTAAGGTGGTGGATATC---------
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-----------------------------------------------------AAATCTATTTTTATTATATGTATTTAT
TATTGTTGGCTACTCCCTCCGTCTGGGTTTATTAGGCCTGCCATAGTATGTTTTTCTAAGGCCCCT--------------
--------CTCGATCTCCTCTGCCGAACTCGCGCACGATT-GGCTGCTGCTTCCATTGAATCGCTGCATGTAGAAAAGTA
GCATGCAACCAGCTGTAGGCAATAACTACCTAGCGCTGTACGTGTGTGTAGTTGGTTGCATGCAAAAGCGGAGCGGGCAA
CCGGCTACTGTGATGCTTTGGAATTCACAAGTGCCTACCAATAGTATTATTTCCTTGGTCTTTCTGTTTTGGTCGATAGG
CCCAATAAATCCAGACGGAGGGAGTACTTCTCTGTTGAGGCTAGTCATAGTGGAGAGTAACTTAGACTAGTAACATACAT
ATGTTACTAGTGTATGTTACTACCTTCATAGTGGGTAGTGTCATAGATGTGGTAACATAGATGCCTTCATTTATTACTTT
GTAGACTCATTATGCATTGGGAAGCGTTATGTGATAGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAACTA
CTTGCCACATCATCATTTTTGCTTATGTGGCATCTATGTTACTACCTATGTTACTCTCACTATGACCAGCCTGAAGCAAG
GGACAAGTGCATGTGGGTCTACCTTCCCTATACATCCATTTCACTACAACCAAAATAAATTAAATGGAAGACGTTCGCCA
CGAGAAGCTAGCACGAT------GCACATTAATGGCAGTACACAGGACTACGATGCTCGTGCACATGCGTTGCATCTAGT
ATTCATGCACTTGTCCCCTCTTTCATCCATCCTCACTATATGAACTCCATACCGGTGGTGTACATTTCTCATTCCAAAGT
CACCA------------------------------------TAGTAGCTATAGCACACTAAGCTGCACCAAAAGAAGTAG
CTAGCCCACTGGCATGGGTTCCATCAAGCGCAACTACAGCGGGTGGGCAGTCCTGCCTGTTGTCGCCGGGATTCTTCTCG
TCGCAGCTGCTGTCATGGCGGAGGGGCGGTCGACGAGCTGCATCGCCCAATGCCCTAACCGGAAGGGCTTAACGGCCTGC
CTCTACCGCTGCTGGTTTGGCCGCACGCCTCTGCATCTTGATCTTGCCGACCAGGAGTCAACACAAGATGTTGTTCTCTT
GACAGCATCAGAGGCGGAGTGCGCGGCCTACTGCAAAACGCATGCCCGAGATTTGCCGGGCAAGTACAGCGCATGCATGG
TCATGTGCCGATCTAGGCCAGATGCCGCGGACGACAAGATCCTCCACATCAACGATGGG---AAGGAGGAGGAGATGCTA
CAAGAGGACGTCAAAGCTCAGCTTGGCACCACCGCCTGCGACGAGTGCAGAAATACAACAGAATTCATGGAGTACATGAG
CTGTCTAATCCGCAATAACTGTGATTAATTAGTGCGTTTCTTCTTGCATACAATAGGGGCCGACATAGAGGATGCCGTGG
TGTGCGGAACGGGCTTGCTGATCATGCGCCTGGAGTAATGTGATCCCATAGTGTGCACAATGGTGCGATCAAGTTGTTTG
CTTCCTATTTTGCATCGAATAAATATGGATCTGTTGAATCCTAACCAGTTCTTTTTTATTTCAAGAGAAAGGA--CCCTT
CTTTGAGAAACAACAAGGAAATAAAAGAATATATTGTTTTATCTTTCTTGCAAATTAGAATTTTAGACTTCGTTAACTAA
GATATTATGTATTATTGGTAGTGGACCTAACATATTGTATTGAGTGGAATTTATGTATGAAATGTAA---------TTGA
TGTGGTCTATGTTGCGTTGTCTATATTATGAATGAAAATTTTGTTGTTG--ATGTGGTATTGTTCATGTGCTCTGAAATG
TACAAAAATGAGTTGTAAAAGATGACGCGTGAAAGTATGTTGTCGAAGAGAACACATCACGTAGATAGCTAGTAGCTAGA
TCGATGCAAGTTGATACATACATACATACATACATACATACATACATATTC------------------------TTTGA
AACAAGTGGGCATATAGGATAAACTTGCACATGCATTCGGGCACAGGGAAAGCTTCGAGATGCCCCTGCAGATCCACGCC
CTGCATTACCAGCAAGCAAATAAACTTATACTTGACGGTGTCATCACCATGCGAGTACAACTAGCTCGATTAGTGCGGAC
GGTGCAGCCTCCTCCCAG---------------------------TGC---------------------------CTATA
AACCAGAAAGGAGGGAGTATCCTGGAGGCAGCTGCATGCATGCTGTCAGTACTGTCTGGTAGGATGCCTAGAGTCAATGC
AAACTTAGCCTCATTGGGCAACTATACTAAGGCAGCT-------------------------------------------
------------------------------------------------------------
>chr7D_1
CTTAACAATGTGTCCATGTCTGTATCATGTTAAGACCTGCATGATCTGTTAATTAGTCACTGATGTAGTGATCTAAATGA
TCTTATATTTCTTTATGGACGGAGTATATTAATTCTTGGCCGATGACATGTTCAAACTGCGTGGGTGCACTTCAGTGTAC
AGGCTTCTCTTAAATGGAAAGATATATGTTTTCAAAATTAATGCACACAGAGAATCGGCTATATACTCTGAAAAGACAAA
CCGAAGCTTCTTCAAATAACAACAATTGAAAGTTTTCAAGTTAACGGTTAACAAGTAATGTTTATGGATGAAATCTTCTC
ATGCTTACTGTCTGGGACATCCTTCCAGGCCATGTATACAGACTCCAACAGCAGATAAGGTGGATATTAAATCTTAGTTT
TGCAATGTTGTACAATGCACATTTGCAACAAGAAAAATAGGATATGTTGTATTATGCCCAGTTCAGACTTGTCTGTCAGC
CAATTATCCAAAGTAAGCTGTGGGCGCAAGATGCCTAGGCCTGATCCTGAGGAGTGCAGGGATTAATTATATACACAAAT
GTCAACTTAATTAGGTGATGGTAGGGTTGGGCATTGGCCATCTCATTCGGAGCCGGCTGGTAGGAAACTAGCTCAACGCA
GAGTATACAGAATTGGTACCCGTTGTGGGTACCGTGCTCAAGAGCTTAAGCCATTCGATAAGGCTATAGGGTATTTTAGT
TTAGTTGCCTTTCAGTTGTAAACCCCATGATTTAGCTGATTCGAAAATTGCTCATTATTTTCAATAATATCCCGCCTCAT
TTAACTCTCTGTTTAGTTTATGCTCTTTCAGTTGTAAAAGCCAAGGCATTTCAATCCTGCTAATTGTGTTCTCCCTTAAT
GCAGCTGCTAGACTATGGTTTACAAACTTCTTGTGACGACACGTACTAGTGGCTAGCTACAGGTAATAAAACCAATGAGT
TTCTTAGTAAGGACCTTGATCGTTTCCAAGCTCTCCTCAATCGTAGCTAGGTAAGTCTTGCCAAGTCTGGATTAACAATG
TGTGTATCACATCGAGACTGGCAGGTTCCATTGGGAAATTCTTAGTATGATCTCATCAATCTCCAAGTCTTCTCACAGCT
GTAGCTATGTCAGTCAGATCTAACGATGCACGTTTTTTTTTTCGAAAAGGGGGGACTCCCTGGCCTCTGCATCAGGACGA
TGCATACGGCCAACTTATTAAACAAAAAAATAGGTTCAACAAGGTCTTAAAGTCTCAGAACGAAAATAAAGGAGAGCTCA
CAAAGAGCTAAAAAGGCGAAAAACAAATTCGCCACAAAAAGCCACAACCGGTTGGCATAAGAAAGATAGGTAAACTAATT
GCCTATCCTATTACATGACCGCCATCCAAACCGGTTGAAGATACCCCGTGCTACCATCTTCCAGCGGATAGATCCAGTAA
CCAAACGCTTCCTGGCCTCCGTCGGAGTGAGTAGCGACCACATACGGATCTAACGATGCACGTTAGGACGCAAAACAAAG
TCAAATTTGCTGATGTTAGCTTGATCTGAGAATTCGAGATTACATTCAGAGTTACGAGCGCGTCTGTGTGTCATGTTGCT
TAAGCCCACCGTCGAGTGAATAATCATGAGCCTCGTTCTTATGCATCTCATAGATCAACTATGGAAAGATATATTGGTCT
CGCACGGTACAGTTTCAAGGGATTGGCAAGGATCAAGTCAGTTGATCTGTAATGTGATGTCTAGATAAGCTAGCTACTAC
TCCTTCCGCCCGGACATATAACAAATATATACTTATGATTTTTTGAAACTTATAAATATATTTTTATTTTTATTTTAAAC
GCCAGGATCACTCGTTCTCAGGAGCATCAACGACTTTCCGGCTATAAGTTAGCTAGTTGACTCAAGCAACTGGATTGACG
AGTCCAAGTTGAAAGATTGCTCGTGATCGAATCAAGAACGCCGTGCGTGCCGACTCCAATGTCCTGATGATGGTGGATTG
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---------------------------------------------ATTATTTCCTGTCTGTAGC----------------
------------------------TACTTCTCTAT---------------------------------------------
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-----------------------------------------------------------------------CGAAGCAAG
GGACAAGTGGATGTGGATCTACCTTCCCTATACATCGATTTCGCTACAACCAAAATAAATTAAACGGAAGACGTTCGCCA
CAAGTAGCTAGCACGAGCTGTGAGCTCATTCATGGCAGTACAAAGGACTACGATGCTCGTGCACATGCGTTGCATCTAGT
ATTCATGCACTTGTCCCCTCCTTTGTCCATCCTCACTATATAAATACCAAACCGGTGGTGTACATTTCTCATTCCGAAGT
CACCAATTAGTAGCTATAGCAGACTTTCCGAAGTCACCAATTAGTAGCTATAGCAGACTAGGCCACACCAAAAGAAGTAG
CTAGCCTGCCGGCATGGGTTCCATCAAGCGCAACTACAGCGGGTGGGCAGTCCTGCCTGTCGTCGCCGGGATTCTTCTCC
TCGCAGCTGCTGTCATGGCGGAGGGGCGGTCGACGAGCTGCATCGCCCAATGCCCAAACCGGAAGGGCTTAACGGCCTGC
CTCTACCGCTGCTGGTTTGGCCGCACGCCTCTGCATCTTGATCTTGTCGACCAGGAGTCAACACAAGAAGTTGTCCTCTT
GACGGCATCAGAGGCGGAGTGCGCGGTCTACTGCAAAACGCATGCCCGAGATTTGCCCCGCAAGTACAGCGCATGCATGG
TCATGTGCCAATCAAGACCAGATGCCGCGAACGACAAGATCCTCCACATCAACGACAGGAAA---GAGGAGGAGAAGCTG
CAAGAGGACGTCGAAGCTCAGCTTAGGACCAGCGCCTGCGACGAGTGCGGAAATACGACAGAATTCATGGAGTACATGAG
CTGTCTAATCCGCAATAATTGTGATTAATTAGCGTGTTTCTTCTTGCATAGAATAGGGGCCGACTCAGAGGATGCCGTGG
TGTGTGGAACGGGCTTGCTGATCATGCACCTGGAGTAATGGGATCCCATAGTGTGCACAATGGTGCGATCAAGTTGTTTA
CTTCCTATTTTGCATCAAATAAATATGGATCCGTCGAATCCTAACCAGTTTTTTCTTATTTCAAGACAAAGGA--CCCTT
CTTTTTGAAACAACGAGGAAATAAAAGAATGTATTGTTTTATCTTTCTTGCAAATTAGAATTTTAGACTTGGTTAACTAA
GATATTATGTATTATTGGTAGTGGACCTAACATATTGTATTGAGTGGAATTTATGTATGAAATGTAAAAGATGACATTGA
TGTGGTCTATGTTGCATTGTCTATATTATGAATGAAATTTTTGTTGTTGATATGTGGTATTGTTCATGTGCTCTGAAATG
TAAAAAAAT---------------------------------------------------GTAGATAGCTAGTAGCTAGA
TCGATGCAAGTTGATACATACATACATACATAC--------ATACATACATACATACACACACACATACATATTTTTTGA
AACAAGTGGGCATATAGGATAAACTTGCACATGC-------------------TTCGAGATGCCCCTGCAGATCCACGCC
CTGCATTACCTGCAAGCAAATAATCTTATACTTCACGGTGTCATCACCATGCGAGTACAGCTAGCTCGATTAGTGCGGAC
GGTGCAGCCTCCTGCCAGTGCGTGTACATAAATACCACCAAAGTATGC---------------------------CTATA
AACCGGAAAGGAGGGAGTATCCTGGAGCCAGCTGCATG------------------------------------------
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>chr7D_924
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------------------------------------------------------------TACATTTCTCATTCCGAAGT
CACTAATTAGTAGCTATAGC----------------------------------AGACTTGGCCGCACCAAAAGAAGTAG
CTAGCCCACGGGCATGGGTTCCATCAAGCGCAACTACAGCGGGTGGGCAGTCCTGCCTGTCGTCGCCGGGATTCTTCTCC
TCGCGGCTGCGGTGATGGCGGAGGGGCGGTCGACGAGCTGAATCGCCCAATGCCCTAACCTGGAGGGCTTAACGGCCTGC
CTCTACCGCTGCTGGTTTGGCCGCACGCCTCTGCATCTTGATCTGGCC--------------------------------
----------------GAGTGCGCGGCCAACTGCAAAACGCATCCCCGAGATTTGTCCGGCAAGTACTACGCATGCATGG
TCATGTGCCAATCCGGGCCAGATGCCGCGAACGACAAGATCCTCCACATCAACGACGGGAAAAAGGAGGAGAAGAAGCTG
CAAGAGGATGTCGAAGCTCAGCTTAGGACCAGCGCATGCGACGAGTGCGGAAATACGACAGAAATCATGGAGTACATGAG
CTGTCTAATCCGCAATAATTGTGATTAATTAGCGTGTTTCTTCTTGCATAAAATAGGGGCCGACACAGAGGATACCGTGG
TGTGTGGAACGGGCTTGCTGGTCATGCACCTAGAGTAATGCGATCCCATACTGTGAACAATGGTGAGATCAAGTTGTTCG
CTTCCTATTTTGCATCAAATAAATACGTATCTGTCGAATCCTAACTAGTTTTTATTTATTTATTTCAAGACTCGGCCCTT
CTTTGAGAGGCAACGAGGAAAAAAAAGAATGTA--------------TTGCAAATTAGAATTTTAGACTTTTTTCAGTAA
GATATTATGTATTAATGGTAGTGGACCTGACAT---GTATTTAATGAAATTTATGTATGAAATGTAAAAGATGACATTGA
TGTGGTCTATGTTGTGTTGTCTATATTATGAA------------------------------------------------
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>SNPs
-----------------------------------------------------------S--------------------
-----------------------------------------------------------------S--------------
------------------------------------------------------------------------S-------
------------------------------------------------------S-------------------------
S-------------------------------------------------------------------------------
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----------------------------------------------------------S---------------------
------------------------S-------S----------------------------------S-SSSSSSS-SSS
SSS-SSSS------------S-------------------S---------------------------------------
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-------------------------------------S------------------------------------------
---------S--S-------------------------------------------------------------------
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--S-----------------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
------S-------------------------------------------------------------------------
---------------------S----------------------------------------------------------
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-----------------------------------------------S--------------------------------
----------------------------------------------------------------------------S---
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-------------------------------------S------------------------------------------
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-----------------------------------------S--------------------------------------
----------------S---------------------------------------------------------------
--------------------------------S-------------------------------------------S---
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---S----------------------------------------------------------------------------
S-----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---------------------------------------------------------S----------------------
---S-S-----------------S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1865
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-----TTGGCTACTCCCTCCGTCTA-------------------------------------------------------
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>reverse_4294
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-----------------------------------------------------CCAGGGGGCGTCTAAAAGC--------
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