>input_sequence_78511
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-------------------------------------------------------------ATGAAGGTGTTTGTGGCCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAAGCTTCGTGGAGACGGCGTACGCGTATGAAGTCGAAATCACGACCGGG
TTCCATGCCGGCGTCCACATGATGGCGGGGCATTCGGCGGGCTTATGGG-CACACTTGCGCGGGCCTTCTCGCCTATCGA
TGGACGGTTCCGGTTCCACCTGGATGCAGCTGCCGCGGAAGGAGGCACTGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCAACGCCGCGAGCGACCCCTCCGACGTCGTCAAGTCGGCCAAGAAATTCCAC
GCATGCGTCAAAACCCTGATCCTCTGCAGCGGGGAGGTCGACCACCTCACGAACGTCATCAACACGCTCTCGATCG-CTC
GCCGGCCCGGGTGTCGACCTGGACATCTTCTTGA---AGGTGCTCCAGCTCGATGTGGCCATGACATGGACGTGGACGGT
GCTGTT-GTG-----------------CCCC-CCTGGTGCGCGCATTACGTGGACTAG----------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr6A_1_TraesCS6A01G193800
TTGCTGGGTGTGGGCCAGTTCTTGCGGTGAAGTTTGCGTCCTGACAGGTCTTTTTGCTTCGATGATTCTTCGGCTTTTTG
ATTGGTCGCTGTTTACCCAGATGTCCTATCGCTGTCGATCTGTGCCGTTCTTGCGTTTTTGATTGGCCGCTGTTGGTCCG
GTTGTCCTGTCACTGTCGAACTTTGCTGCTGTTGGCCGA-GGCCGCTATCTGCTAGGATCTCTTTGGGATTTGCTTGCTG
GGTCAAACGTTGTTCTTATCTGGGATGTCAGGAGCTGCAGGATTTTTGGCAGCATGCATGCGCTGGTTTGCCACGATTTT
CTGATCATGTGTATGGCATCTGGGGTTGCATGCATGATATAATTACCGCTGC------GTGATGGGACTATGTGCATGCC
ATGATTTGTATCCCGTGTATTCCGGATGGCCGCTTGGGTTAGATGGTTTTGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTTGTTTTTCCCACTGTCTTCTCTAAGTTATGCCACGTATTGCTGTTGTGTTGATGTGTCAATGTTCTATTGTTTGG
CTGCTATTTTTACCCACCGCTTGATTGGTTCCTTCTGGATCGTTCGCCGCTT-AATAGGTGCTTTCTA---GATCAACGA
-CCGCTTAATTTGTGCATGGTCGGTTATCGCCCTATAAATAGAAAGATTTGGTGTGGATTTGCTTCATGGATCACGGT--
TGTAGTTGGCTGCTTCGTGCTCTCATGGTTCGTGGTGATC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACG
AAGTCCTCGCCGCTGCCCTCGGAGACGTCCC-------ACACCACCTCCGACTCTCCTGCATCGTTGTCCT-----GCAA
GAAGCGACGCTGCAAATTCTGCTCGCCCACCGTCCCATGCCGCGAGGACGAGTACGGCGTGTTACCTCGACGGGTTGCAT
AGGCCGTCGCGGTGCACTAGGGCGAGCAAGGGGCACCTGCCATCGCATCG-------TGACGATGGCGAGGATTAACTTT
GTTTTCATATCGTGTTGATAAACGAGCAAAAGGGGATGAGACCATCAATCGGGCGACGCCGATGAAGGTGTTTGTGGCCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAAGCTTCGTGGAGACGGCGTACGCGTATGAAGTCGAAATCACGACCGGG
TTCCATGCCGGCGTCCACATGATGGCGGGGCATTCGGCGGGCTTATGGG-CACACTTGCGCGGGCCTTCTCGCCTATCGA
TGGACGGTTCCGGTTCCACCTGGATGCAGCTGCCGCGGAAGGAGGCACTGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCAACGCCGCGAGCGACCCCTCCGACGTCGTCAAGTCGGCCAAGAAATTCCAC
GCATGCGTCAAAACCCTGATCCTCTGCAGCGGGGAGGTCGACCACCTCACGAACGTCATCAACACGCTCTCGATCG-CTC
GCCGGCCCGGGTGTCGACCTGGACATCTTCTTGA---AGGTGCTCCAGCTCGATGTGGCCATGACATGGACGTGGACGGT
GCTGTT-GTG-----------------CCCC-CCTGGTGCGCGCATTACGTGGACTAGGGCAGCTACTCCCTCGCTACCA
TGCCCGACGCGAAGAGGAAGCGCGTGGGGAGCTCCGGCGTCGGCCAGGCCAGAGACGCCGAC------------GGC---
---------AAGGCCGCGTCTCACTCCCATGACCAGGCCGTCGTTGACCGCGAGCACCGGCACAAGCGCTGGACCTTCTC
GTGCAAGCGGCACATCGGCTCCTTCCCTCCGCCGGCAGGGCCCGACCGCTCTATA------GTAATGGCGATGGCCAGGG
TGTGCCGCCGCATCGGGACGCCGAACCTCTGGTAGCCCTTCTCGCGGATCTCAGCGGTAACATGTCGTGCGCGTCCCTGG
ACGCGGGACGCGGCCGTCGACCTGTAATCGGTGGCAATGCACGACATCGACCACCTGCTCGGCCACTCCCAATGGGCCTT
GCCTTGTACATGTACAGCGTGAAGGCCGAGAGGAAGATGGATCGGAGCCGGAGGCGCAAAAGAGCGAGTTGATGCAGCAG
GAGGTGGCGAGGAAAAGTGTGAGACCTGGAGACGCGAACCTGTTTCCATGCTCG------AGGAGCAGATCAGGTCCGCT
CGGAGCAACCTTGGTTCATTCATTCTTTGCAGCTCGACCATGAACTCCATAAGATA----TCCAAGGTGTGTGCCGACTG
CCGACGCCAGGGCCGTACCTAGAAAATCAGAGGCCCGGAGCGAATCAAAATTTAGGCCCTGACATTTGAAAGGGCGGATT
AAAATGTATAGTGTGTTAATGTTCATATAGAATTACACCACCAGATGCACAAGTTCAAGAAAGAATTACACCACTGGATG
TACTAGTCTACTTATAAACTAATAAAAAAATAGGGTGCCGAGAACTGCCACGACTCTGTAGGTTTTGATCATAGGAGACT
GCAAATGAAGCTTGGATGGTTCATTGTAGGTCAGCCACAAAGCAGTGCAAGGGGCAACTCCTATCGCTATAGGGCCCCAA
AAATGATGTACAAGAGCATATGAGAATTGAGAGGAAAGCTCCCCAATATATAGAAGAT
>chr1B_1
TTGCTGGGTGTGGGCCAGTTCTTGCGGTGAAGTTCGCGTCCTAACAGGTCTTTTTGCTTTGATGATTCTTCGGCTTTTTG
ATTGGTCGCTGTTTGCCCAGATGTCCTGTCGCTGTCGATCTGTGCCGCTCTTGCGTTTTTGATTGGCCGCTGTTGGTCCG
GTTGTCCTGTCACTGTCGAGCTTTGCCGCTGTTGGCCCA-GGCCGCTGTCTGCTAGGATCTCTTTGGGATTGGCTTGCTG
GGTCAAACGTTGTTCTTATCTGGGATGTCAGGAGCTGCAGGATTTTTGGCAGCATGCATGCGCTGGTTTGCCATGATTTT
CTGATCATGTGTATGGCATGTGGGGTTGCATGCATGATATAATTAC-GCTGC------GTGATGGGACTACGCGCATGCC
ATGATTTGTATCCCGTGTATTCTGGATGGCCGCTTGGGTTAGGCGGTTTTGACTTG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTTTTTCCCACTTTCCTCTCTAATTTATGCCACGTATTGCTGCTGTGTTGATGTGTCAATGTTCTATTATTTGG
CTGCTATTTTTATCCACCGCTTGATTGGTTCCTTCGGGATCGTTCGCCGCTT-AATAGGTGCTTTCTA---GATCAACGA
-CCGCTTAATTTGTGCATGGTCGGTTATTGCCATATAAGTAGAAAGATTTGGTGTGGATTTGCTTCACGGATCACAGT--
TGTAGTTGGCTGCTTCGTG---------------GTGATC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACG
AAGTCCTCGCCGCTGCCCTCGGAGACGTCCCACACCAGACACCACCTCCGACTCTCCTGCGTCGTTGTCCT-----GCAA
GAAGCGACGCTGCAAATTCTGCTCGCCCACCGTCCCATGCCGCGAGGACGAGTACGGCGTGTTTCCTCGATGGGTTGCAA
AGGCCGTCGCGGTGCACTAGGGCGAGCAAGGGGCACCTGCCATCGCGTCA-------TGACGATGGCGAGGATTAACTTT
GTTTTCATATCGTGTTGATAAACGAGCAAAAGGGGATGAGACCATCGATCGGGCGACGCCGATGAAGGTGTTTGTGGCCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAAGCTTCGTGGAGACGGCGTACGCGTATGAAGTCGAAATCACGACCGGG
TTCCATGCCGGCGTCCACATGATGGCGGGGCATTCGACGGGCCTATGGG-CACGCTTGCGCGGGCCTTCTCGCCTATCAA
TGGGCGGTTCTGGTTCCACCTGGATGCAGCTGCCGCGGAAGGAGGCGCTGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCAACGCCGCGAGCTACCCCTCCGACGTCGTCGAGTTGGCCAAGAAATTCCAT
GCAGGCGTCAAAACCCTAATCCTCTGCAGCGGGGAGGTCGACCACCTCACGAACGTCATCAACACGCTCTCGATCG-CTC
TCCGGCCCGGGTGTCGACCTGGACATCTTCTTGA---AGGTGCTCCAGGTCGATGTGGCCATGCCATGGACGTGGACGGT
GCTGTT-GTG-----------------CCCC-CCTGGTGCGCGCATTACGTGGACTAGGGCAGCTACTCCGTCGCTACCA
TGCCCGGCGCGAAGAGGAAGCGCGTGGGGAGCTCCGGCGTCGGCCAGGCCAGAGACGGCGAC------------GGC---
---------GAGGCCGCGTCTCACTCCCACGACCAGGCCGCCGTTGACCGCGAGCACCGCCACAAGCGCTGGACCTTGGC
GTGCAAGCGGCACACCGGCTCCTTCCCTCCGCCGGCAGGGCCCGACCGCTCTGTA------GTAATGGCGATGGCCAGGG
TGTGCCGCCGCATCGGGACGCCGAACCTCTGGTAGCCCTTCTCGCGGATCTCAGCGGTAACATGTCGTGGGCATCCTTGG
ACGCGGGACGCGGCCGTCGACCTGTAATCGGTCGCGATGCACGACATCGGCCACCTGCGCGGCTACTCCCAATGGGCCTT
GCCTTGTATATGTACAGCGTGAAGGCCGAGAGGAAGATGGATCGGAGCCGGAGGCGCAGAAGAGCGAGTTGATGCAGCAG
CAGGTGGCGAGGAAAAGCGTGAGACCTGGAGACCCGAATCTGTTTCCACGCTCG------AGGAGCAGATCAGGTCCGCT
CGGTGCAACCTTGGTTCA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr1B_72
GGG-----------------------------------------------------------------------TTTTTG
ATTGGCCGCTGTTCGCCCAGATGTCCCGTCGCTGTCGA----TGCCGCTGTTGGGTTTTTGATTGGCCGCTGTTGGTCCG
GTTGTCCTGTTGCTGTCGATCTTCGCCGCTGTTGGGCCAAATCAGT----TGCTAGGATCTCCTTGGGATTTGCTTGCTG
GGTCAAACGTTGTTCTTATCTCGGATGCCAGGAGCTGCAGGATTTTTGGCAGCATGCATGCGCTGGTGCGCCATGATTTT
CTGATCATGTGTATGGCATGTGTGGTTGCATGCATGATATAATTAC-GATGC------GTGATGTGACCACGTGTATGCC
ATGATTGTC-TCCCGTGTATTCCGGATGGCCGCT----------GGTTTTGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTTGTTTTTCTTAGTTTCTTCTCTAATTTATGCCACGTAGTGCTGCTGTGTTTATGTGTCATTGTTGTATTGTTTGG
CTGCTATTTTTACCCACCGCTTGATTGGTTCCTTCTGGATCGTTCACCGCTT-AATATGTGTTTTCTACTAGATCAATGA
-CCACTTAATTTGTGCATGGTCGGTTATTGCCCTATAGATAGTAAGATTTGGTGTGGATTTGCCTCACGGATCACGGTTG
TGTAGTTGGCTGCTTTGTGCTCTCATGGTTCGTGGTGATCGCGATGCTCCCCGCCG------------------------
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----------------------------------------------------------
>chr3B_135
--------------------------------------------------------------------------------
------------------------------------------------------GTTTTTGATTGGCCGATGTTGGTCCG
GTTGTCCTGTCACTGTCGAGCTTTGCCGCTGTTGGCCCAGGGCCGCTGTCTGCTAGGATCTCTTTGGGATTGGCTTGCTG
GGTCAAACGTTGTTCTTATCTGGGACGTCAGGAGCTGCAGGATTTTTGGCAGCATGCATGCGCTGGTTTGCCATGATTTT
CTGATCATTTGTATGGCATGTGGGGTTGCATGCATGATATAATTAC-GCTGC------GTGATGGGACTATGTGCATGCC
ATGATTTGTATCCCGTGTATTCCGGATGGCCGCTTGGGTTAGGCAGTTTTGACGGACGAGACTTGCCTGCTCCCCATGCG
TGTGCCCATCTGTGTTCCCGCACATGTGGCATGATTTGATTGGATCAAAATAAGGCCCGGCCCCACCCCCTTAAAATCAG
GGGGGAGATGATTAGATTAGAAAGAAAAAAGGAAAAAAGACAATCGCAGGATGAAGTGGGAGCACGGATGGAAGCATGGG
GACTTATTTTTTCCCACTTTCCTCTCTAATTTATGCCACGTATTGCTGGTGTGTTGATGTGTCAATCTTCTATTGTTTGG
CTGCTATTTTTACCCACCGCTTGATTGGTTCCTTCTGGATCGTTCGCCGCTT-AATAGGTGCTTTCTA---GATCAACGA
-CCGCTTAATTTGTGCATGATCGGTTATTGCCCTATAAGTAGAAAGATTTGGTGTGGATTTGCTTCACGGATCACGGT--
TGTAGTTGGCTGCTTTGTGCTCTCATGGTTCGTGGTGATC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACG
AAGTCCTCGCCGCTGCCCTCGGAGACGTCCCACACCAGACACCACCTCCGACTCTCCTGCGTCGTTGTCCT-----GCAA
GAAGTGACGTTGCAAATTCTGCTCGCCCACCGTCCCATGCCGCGAGGACGAGTACGGCGTGTTTCCTCGATGGGTTGCAA
AGGCCGTCGCGGTGCACTAGGGCGAGCAAGGGGCACCTGCCATCGCGTCG-------TGACGATGGCGAGGATTAACTTT
GTTTTCATATCGTGTTGATAAACGAGCAAAAGGGGATGAGACCATCGATCGGGCGACGCCGATGAAGGTGTTTGTGGCCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAAGCTTCATGGAGACGGCGTACGTGTATGAAGTCGAAATCACGACCGGG
TTCCATGCCGGCATCCACATGATGGCAGGGCATTCGACGGGCCTATGGG-CACGCTTGCGCGGGCCTTCTCGCCTATCAA
TGGGCGGTTCTGGTTCCACCTGGATGCAGCTGCCGCGGAAGGAGGCGCTGCAG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCAACGCCGCGAGCTACCCCTCCGACGTCGTCGAGTCGGCCAAGAAATTCCAC
GCAGGCGTCAAAACCCTAATCCTCTGCAGCGGGGAGGTCGACCACCTCACGAACGTCATCAACACGCTCTCGATCG-CTC
GCCGGCCCGGGTGTCGACCTGGACATCTTCTTGA---AGGTGCTCCAGGTCGATGTGGCCATGCCATGGACGTGGACGGT
GCTGTTGGTG-----------------CCCC-CCTGGTGCGCGCATTACGTGGACTAGGGCAGCTACTCCGTCGCTACCA
TGCCCGGCGCGAAGAGGAAGCGCGTGGGGAGCTCCGGCGTCGGCCAGGCCAGAGACGGCGAT------------GGT---
---------GAGGCCGCGTCTCACTCCCACGACCAGGCCGTCGTTGACCGCGAGCACCGCCACAAGCGCTGGACCTTGGC
GTGCAAGCGGCACACCGGCTCCTTCCCTCCGCCGGCAGGGCCCGACCGCTCTGTA------GTAATGGCGATGGCCAGGG
TGTGCCGCCGCATCGGGACGCCGAACCTCTGGTAGCCCTTCTCGCGGATCTCAGCGGTAACATGTCGTGCATC-------
------------GCCGTCGACCTGTAATCGGTGGCGATGCACGACATCGGCCACCTGCTCGGCCACTCCCAATGGGCCTT
GCCTTGTACATGTACAGCGTGAAGGCCGAGAGGAAGATGGATCGGAGCCGGAGGCGCAGAAGAGCGAGTTGATGCAGCAG
CAGGTGGCGAGGAAAAGCGTGAGACCTGGAGACCCGAATCTGTTTCCATGCTCG------AGGAGCAGATCAGGTCCGCT
TGGAGCAACCTTGGTCGATTCATTCTTTGCAGCTTGACCATGAACTCCATAAGATA----TCCAAGGTGTGTGCCGACTG
CCGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr1B_210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGCTATGATCTCTTTGGGATTTGCTTGTTG
GGTCAAACGTTGTTCTTATCTGGGATGTCAGGAGCTGCAGGATTTTTGGCAGCATGCATGCGCTGGTCCGCCATGATTTT
CTAATCATGTGTATGGCATGTGGGGTTGCATGCATGATATAACTAC-GTTGCGTGGGTGTGATGTGACCACGTGCATGCC
ATGATTGTG-TCCCGGCTATTCCGGATGGCCCCTTGGGCTAGGCGGTTTTGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTTGTTTTTCTCTCTTTCTTCTCTAATTTATGTCGCGTATTG------------TGTGTCATTGTTCTATTGTTTGG
CTGCTATTTTTACCCACTGCTTGATTGGTTCCTTTTGGATCGTTCGCC-CTT-AATAGGTGTTTTCCA---GATCAACGA
CCCGCTTAATTTGTGCATGGTCGGTTATTGCCCTATAAATAGGAAGATTTAGTTTGGATTTGCTTCACGGATCACGGT--
TGTAGTTGGCTGCTTTGTGCTCTGATGGTTCGTGGTGACCGCGATGCTCCCCGCCGTCCGGGTCGCCCTCGTGGAAACCA
TCTTGGCGTTCTTGGTCATGCCTGTGGTGGTTATGTTGATTGGCGGAATGGTTTTGCATATGCCGAAAATCTTGGTGGGT
GCGCTGCCGAGCTGCCGTGCTGCCCGACGAGTGACATGGGGCACCAGCCGAGTCCGAGCAGCCCGGCCGCTCCGACGAAG
AGGCCGTGTTTGCGGTGGCCGCAGTCGATGGTGACGCCCTGCACTGACGTTTTGTCCTCGAAGGTGAGCATCTCCAATGC
GTACGAGCCGTTGCCGTACGACATCTGTTACCCACATGCGCAGCCGGAGGATCCGTCGGCCAGCGTCGGGCAGACGCCGG
AGCCATAAGGCACGACGGTGAAGGAGACTGACGTGGCTGGGTCGGTCTGTTGATAGGAGTAGAACTCCGCGCAGGGAGGT
ACAACACCCAGATGGCGTCGCTTCCGGAATGCATGACCAACTACTACTCCATGGGCGGCGACTCCATGTCCACGCGGACG
AAGTCCTCGCCGTCG--------------------------CCACCTCTGGCTCTCTTGCATCGTTGTCCATGATGGCAA
GAAGCGA----------------CGCCCACCGTCCCATGTCGCGAGGACGAGTAAGGCGTGTTACCTCGATGGGTTGCAA
AGGCCGTCGCGGTGCAGCAGGGCGAGCGAGGAGCATATGCCATCGTGTCGTGAGTCGTGACGACGGCGAGGATTATCTTC
GTTTTCATATGGTGTTGGCAAACGAGCAAAAGGAGATGAGACCATCGATCGGGCGACGCCGATGAAGGTGTTCGCGACCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAAGCTTCATGGAGACGG-GTACGCGTATGAAGCCGAAATCA--------
----------GCCTCCACATGATGGCGGGGCATTCGACGGGGCCTTGGG-CACGCTTGCGCGGGCCTTCTCGCCTATCGA
CGGGC------GGCTCGACCTGGATGCATTTGCTGCGGAAGGAGGCGCTGTGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGATGTGCTCGACGACACGAGCGACCCCTCCAACGTCGTCGGGTCAGCCAAGAAATTCCAC
GCAGGCGTCAAAGCCCTGATCATCTGCAGCGGGGAGGTTGACCACCTCACGAACGCCATCAACGTGCTATCAATCGCCTC
GCCGGCCCGGGTCTCGACTTGGACATCTTCTTGA---AGGTTCTCCAGCTCGATGTGG-----------------ACGGT
GCTTTT-GTG-----------------CCCG-CCTAGTGCGCTCATTACATGGACTAGGGCAGCTACTCCGTCGCTACCG
TGCCCGGTGCCAAGAGGAAGCGCGCGGGGAGCTCCGGCGTCGGCCAGGCCGGAGACGGCGACAGCGACGCGGATGGC---
---------GAGGCCGCGTCTCACTCCCACGACCAGGGCGTCGTTGACCGCGAGCACCGGCACAAGCGCTGGGCCTTGGC
TTGCAAGCGGCACACCGGCTCCTTCCCTCCGCCGGCAGGGCCCGACTGCTCCATAGTAGTGGCGACAGCGATGGGCAGGG
TGTGCCACCGTATTGGGACGCTGAACCTCCGGTAGCCCTTCTCGCGGATCTCAGCGGTAATGTGTCGTGCGCGTCCTT--
-----GGACGCGGCCGTCGACCTGCAGTCGGTGGCGGTGCACGAGATTGGCCACCTGCTCGGCCTCTCCCAATGGGCTTT
GCCTTGTACATGTACGGCGGGAAGGCGGAGGGGAAGATGGATCA------GAGGCGCAGAAGAGCGAGTTGATGCAACTG
CAGGTGGCCAGGAAAAACGGGAGACCCGAGGCCCCGAGCACGTTTCCACGCTT------CAGGAGCAGATCAGGTCCGCT
CGGAGGAACCTTGGTTCTTTTATTCTTTGCAGCTCGACCATGAACTCCATAAGATA----CCCAAGGTCTGTTCCGACTG
CCG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3A_210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TGCTAGGATCTCTTTGGGATTTGCTTGCTG
GGCCAAACATTGTTCTTATCTGGAATTTCAGGAGCTATAGGATTTTTGGCAGCATGCATGTGCTGGTCCGCCATGATTTT
CTGATCATGTGTATGGCATGTGGGCTTGCATGCATGATATAATTAG-GCCGC------GTGATGTGACCATGTGCTTTCC
ATGATTTTC-TCCCATGTATTTTGGATGGCCGCTTGGCTTAGGCGGTTTTGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TTTGTTTTCCTTACTTTCTTCACTAATTTATGCCATGTATTGATGTTGTGTTTATGTGTCATTGTTCTATTGTTTGG
CTGCTATTTTTACCCACCGCTTGATTGGTTTCTCCTCGGTCGTTCACC-GTTGAATATGTGTTTTCTA---GAT---CGA
-CCGCTTAATTTGTGCATGGTCG-TTATTACCCTATAAATAGGAAGATTTGGTGTGGATTTGCTTCATAGAGCACAAT--
TGTAGTTGGCTGCTTTGTGCTCTCATGGTTCGTGGC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------AATCACGA-----
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr3A_717
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CG
AAGTCCTTGCCACTGCCCTCAGAGATGTCCC-------ACACCACCTCCGACTCTCCTATGTCGTTGTCCTTGATGGCAA
GAAGCTACACTGCAAACTCTGCTCACCCATTGTCCCATGCCACGAGGACGAGTATGGCATGTTACCTCGATGGGTTGCAA
-GGCTGTCGCGGTGCAGTATGGTGAGAGAGGGGCATCTGCCATCACATCA-------TGACGACAGTGAGGATTATTTTC
GCTTTCATATGGTGTTGGCAAACAAGCAAAAGGAGATGAGACCACCGATCGGGTGACGCCGATGAATGTGTTGACGACCA
TGTTCGAATGGTGGGCGGCAATGACAACACTAAGATTCATGGAGATGGTGTATGCATACGAAGCCGAAATCACGACCGGG
TTCCATGCCGGCGTCCACATGATGGCGGGGCATTCGATGGGACCTTGGG-CATGCTTGCGTAGGCGAAGGCATGGGTAGG
AGG---------------------TGCAGCTGCTGCGAAAGGAGGCGCTATGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGTAGGAGGTGCTTGATGCCGCGAACGACCCCTCCGACGTCGTCGGGTTGGCCAAGAAATTCCAC
GCATGTGTCAAAGGCTTGATCGTCTGCAGCGGGGAGGTCGACCAACTCACGAACGCCGACAACGCGCTCTCGATCGCCTC
ACTGGCCCGGGTGCCGACCTGGACATCTTCTTGA---AGGTGCTCTAGCTCGATGTGGCCATG-----GACGTGAACGGG
GCTATTGTG-------------------CCCACCTGGTGCGCACATTACATGGACTAGGGTAGCTACTCCGTCACTACC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------
>chr2D_764
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------TCTCCTGCGTTGTTGTCCTCGATGGCAA
GAAGCGACGCTGCAAACTCTGCTCGCCCACCGTCCCATGCCGCGAGGACG------GCGTGTTACCTCGACGGGTTACAA
AGGCCGTCGCGGTGCAGTAGGGCGAGCGAGGGGCATCTTCCATCGTGTCGTGACGACGGCGAGGATCGAGGATTATCTTC
GTTTTCATATGGTGTTGGCAAACGAGCAAAAGGAGATGAGACCATCGATCGGGCGACGCCGATGAAGGTGTTCGCGACCA
CGTTCGTATGGTGGGCGGCGACGACAACACTAAGCTTCATGGAGACGGCGTACGCATATGAAGCAGAAATCACGACCGGG
TTCCATGGTGGCGTCCACATGATGGCGGGACATTCGACGGGCCCTTTGG-CACGCTTGCGCAGGCCTTCTCGCCTATCGA
CGGGC------GGTTCCACCTGGATGCAGCTGCTGCGGAAGGAGGCGCTGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCGACGCCACGAGCAACCCCTCCGACGTCGTCGGGTCGGCCAA-AAATTTCAA
GCAGGCGTCAAAGCCCTGATCGTCTGCAGCGGGGAGGTCGACCACCTCACGAACGCCGTCAACGCGCTCTCGATCACCTC
ACCGGCCCGGGTGCCGACCTGGACATCTTCTTGAAGCAGGTGCTCCAGCTCGATGTGGCCATG-----GACGTGGACGGT
GTTATT-GTG-----------------CCCG-TCTGGTGCGCGCATTACCTGGACTAGGGCAGCTACTCCGTCGCTACCG
TGCCCGGCGCCAAGAGGAAGCACGCGGGGAGCTCCGACGTCAGCCATGCCGGACACAGCGACGGCGACGCGGACGGC---
---------GAGGCCGCGTCTCACTCCCACGACCAGGGCGTCGTTGGCCGCGAGCACCGGGACAAGCACTTGGCCTTGGC
ATGCAAGCGGCACACCGGCTCCTTCCCTTCGCCGGCAGGGCCTGACCGCTCCGTAGTAGTGGTGATGGCGACGGCCAGGG
TGTGCCGCCGCATGGGGACGCCGAACCTCCGGTAGCTCTTCTCGCGATTCTCAGAGGTAACGTGTCGTGCGCGTCCTT--
-----GGACGCGGCCGTCGACCTGCAGTCGGTGGCAATGTACGAGATCGGCCACCTGCTCGGCCTCTCCCAATGGGCTTT
GCCTTGTACATGTACGACGTGAAGGCCGAGAGGAAGATGGATCGGAG------GCGTAGAAGAGCGAGTTGATGCAGCAG
CAAGTGGCGAGGAAAGACGGGAGACCTGGAGACCCGAGCATATTTCCACGCTCCAGGAGCAGGAGCAGATCAGGTCCGCT
CGGAGCAACCTTGGTTCTTTCATTCTTTGCAGCTCGACCATGAATTCCATAAGATA----TCCAAGGTGTGTGCCGACTG
CCGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr7A_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------CAAACTCTGCTCGCCCACCGTCCCATGCCGCGAGGACG------GCGTGTTATATCGACAGGTTGCAA
AGACCGTCGCGGTGCGGTAGGGCAAGCAAGGGGCATCTGCCATCGCATCGAGA------ACGACGGCGAGGATTATCTTC
ATTTTCATATGGTGTTGGCAAACAAGCAAAAGGAGATGAGACCATCGATCAGGCGACACCGATGAAGGCGTTCGTGACCA
TGTT------------GGCAACGACAACACTAAGCTTCATCGAGACGGCGTACGCGTATGAAGCCGATATCACGACCGGG
TTCCATGCCGGTGTTCACATGATGACGGGCCATTCGACGGGCCC-TTGG-CACGCTTGCGCGGGCCTTCTCGCCTATCGA
CTGGC------GGTTCCACGTGGATGTAGCTGCTGCGAAAGGAGGCGCTGCGAGGGAAGGAGCAAAGTTTTAAATAGCGC
GCTAAGCCTCTTAGCGGCGGACCTCTTCTAAATGCTATAGCATGCTATAGCGGTGCTATAGCGAGCTATTTAAAATATTT
GCTCATGTGTTTGAACAAAAGATCCTTGACGCAGGACCTCTTCTAAACGCTATAGCGTGCTATAGCGGAGCTATAGCGGG
CTATTTAAAACCACGGGAAGGAGGTGCTCGACGCACCAGCAA----CTCCGACGTCGTCGGATTGGCCAAGAAATTTCAC
GCAGGCGTCAAAGCCTTGATCGTCTACAGCGGGGAAGTCGACCACCTCACTAACGCCGTCAACGCACTCTCGATTGCCTC
GCCAGCCCGAGTGCCGACCTGGACATCTTCTTGA---AGGTGCTCCAGCTCGATGTGGCCATG-----GACGTGGACGGT
GCTGTTGTG-------------------CCC-CCTGGTGCGCGCATTACGTGGACTAGGGCAGCTACTCCGTCGCTCCCG
TGCCCGGCGCCAAGAGGAAGCGTGCGGGGAGCTCCCGCGTCGGCCAGGACGGAGACAGCGAC------------GGC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr1B_977
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------GAGACCATCGATCGGGTGACGCCGATGAAGATGTTCCCGACCA
CGTTCGTATGGTGGGCGGCAACGACAACACTAATCTTCATGGAGACGATGCACGCGTATGAAGCCGAAATCACGACCGGG
TTCCATCCCGACGTCCACATGATGGCAGGGCATTCGACGGGCCA-TTGGGCACGCTTGCGCGGGCCTTCTCGCCTATCGA
CGGGC------GGTTCGACCTGGATGCAGCTGCTGCGGAAGGAGGCGCTGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGAGGTGCTCGGCGCCACGAGCGACCCCTCCGACGTCGTCGGGTCAGCCAAGAAATTCCAC
GCAGGCGTCAAAGCCCTGATCGTCT----CGGGGAGGTCGACCACCTGACGAACGCCGTCAAC-CGCTCTCAATCGCCTC
ACCGGCCCGGGTGCCGACCTGGACATCTTTTTGA---AGGTGCTCCAGCTCGATGTGGCCATG-----GACGTGGACGGT
GCTGTTGTG-------------------CCTGCCTGGTGCGCGCACTACATGGACTAGGGCAGCTACTCCGTCGCTACCG
TGCCCGGCGCCAAGAGGAAGCGCGCGGGGAGATCCGGCATCGGCCAGGCCGGAGAAGGCGACGGCGACGCGGATGGC---
---------GAGGCCGCGTCTCACTCCCACGACCAGGGCGTCGTTGACCGCGAGCACCGGCACAAGCGCTGGGCCTTGGC
GTGCAAGCGGCACACCGGCTCCTTCCCTCCGCCATCAGGGCCCGACCGCTCCGTAGTAGTAGCGATGGCGATGGCCAGGG
CGTGCCACCGCATCGGGACGCTGAACCTC---------------------------------------------------
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>chr1D_1130
--------------------------------------------------------------------------------
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------------------------------CATTCGACGGGCCC-TTGGGCATGCTTGCACGGACCTTCTTTCTTATCGA
CGGGT------GGTTCCACCTGGATGCAGCTGCTGTGGAAGGAGGCAATGCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GGGCAGGACGTGCTCGACGCCACGAGCGACCCCTCTGATGTCGTCGGGTCGGCCAAGAAATTCCTC
GCAGGCGTCAAAGCCCTACTTGTATGCAGTGGGGAGGTCGACCACCTCACGAATGTCGTCAACGCGCTCTCGATCGCCTC
ACCTGCCTGGGTGCCGACCTGAACATCTTCTTGA---AGGTGCTCCAGCTCGATGTGGCCATT-----GACGTGGACGAT
GTTGTTGTG-------------------CCTGCCTGGTGCATGCATTACGTGGACTAGGGTAGCTACTCCGTAGCTATCG
TACCCAGCGCCAAAAGGAACCGCACGGGGAGCTCTGGCCTTGGCTAGGCCGGAGATGGCGACGGCGACGCGAACGGT---
---------GAGGCCGCGTCTCACTCCCATGACCAGGGCATCGTTGAACGTGACCACCGCTACAAGCGATGGGCCTTGGC
ATGCAAGCGACACACCGGCTCCTTCCCTCCGCCCGCAGGGCCTGACCGCTCCAAAGTAGTGGCGATGG------------
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>chr3B_1193
TCCACCG-------------------------------------------------------------------------
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-------------------CTGGCTGCAGCTGCTGCGGAAGGAGGCGCTGCGG---------------------------
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--------------GGGCAGCAGGTGCTCGACGCCACCACCGACCCCTCCGCCGTCGTCGGCTCGGCCAAGAAGTTCCTC
GCCGGCCTCAAGTCCCTCTTCGTCTGCAGCGCCGAGGTCGACCGCCTCACCGACGCCGTCGACGCGCTC--GAGCGCCTA
GCCGGCCCCGGCGCCGACCTCGACATCTTCTTGA---AGGTGCTCCAGCTCGACGTCGACATG-----GACGTCGACGAC
GCCGCCGCCGCTCCGGCCCCGGCCGCCCCCT-TCTCGGCCGCGCATTACGTCGACCAGGGCAGCTACTCCGTCGCCACCG
CGCCCGGCGCCAAGAGGAAGCGCGCGGGGAGCTCTAGCGTCGACCAGGCCGGGGACGCCGAC------------GGCGAC
GCGGACGGGGAGACCGCGCCTCACTCCCACGGCCGGGGCGTCCTCGACCGCGCGTACCGGCACAAGCGCCGGGCCCTGGC
GTGCAAGCGGCACACCGGCTTCTTCCCTCCGCCGGCGGGGCCAGACCGCTCCGTGGCGGTGGCGATGGCCATGGCCAGGG
TGCGCCGCCGCATCGGGACGCCGAGCCTCGGGCAGCCCTTCTCCCGGAT-------------------------------
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>chr7B_1301
TGCTC---------------------------------------------------------------------------
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---------AAAGCCCTGATCGTCTGCAGCGGGGAGGTCGACCACCTCAGGAACGCCGTCAACGCACTCTCGATCGCCTC
ACCGGCCCGGGTGCCGACCTGGATATCTTCTTGA---AGGTGCTCCAGCTCGATGTGGCCATG-----GACGTGGACGGT
GCTGTTGTG-------------------CCCGCCTGGTGCGCACATTACGTGGACTAGGGCAGCTACTCCGTCGCTCCAG
TGCCCGGCACCAAGAGGAAGCACGCAGGGAGCTCCGGCGTCGGCCAGACCGGAGACAGCGAC------------GGCGAC
GCGGATGTCGAGGCCGCGTCTCACGCCCACGACCAGGGCGTCGTTGACCGCGAGCACCGGCACAAGCGTTGGGCCTTGGC
GTGCAAGCGGCACACCGGCTCCTTCCCTCCGCCGGCAGGGCCCGACCGCTCCGTAGTAGTGGTGATGGCGACGGCCAGGG
TGTGCCGCCGCATGGGGACGC-GAACCTCCGGTAGCCCTTCTCGCGGTTCTCAGCGGTAATGTGTCGTGTGCGTCCTT--
-----GGATGCGGCCGTCGACCTGCAGTCGGTGGCGGTGTACGAGATTGGCCACCTTCTCGGCCTCTCCCAATGGGCTTT
GCCTTGTACATATACGGCATGAAGGCCGAGAGGAAGATGGATCGGAG------GCGCAAAAGAGCGAGTTGATGCAGCAA
CAAGTGGCGAGGAAAAACGGGAGACCTGGAGACCCGAGCACGTTTCCACGCTCA------AGGAGCAGGTCAGGTCCGCT
CGGAGCAACCTTGGCTCTTTCATTCTTTGCAGCTAGACCATGAATTCTATAAGATATATATCCAAGGTGTGTGCCGACCG
CCGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>SNPs
----------------------------------S-------S----------------S--------------------
--------------S------------S-------------------S--------------------------------
-------------------S------S----------S---------S--------------------------------
-------------------------------------------------------------------------S------
-------------------S--------------------------S---------------------------------
------------------------------------------SS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S----------S--------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------------------------------S-----S----------S--------------------------
---S------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------------------------------------------------------S---------
------S-------------------------------------------------------------------------
---------S-------------------------------------------------------------------SS-
--------------S-----------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
S----------------S---------------S----------------------------------------------
--------------------------------------------------------------------------------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------GATGGCCGCTTGGGTTAGAT------------------------------------
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>reverse_3410
--------------------------------------------------------------------------------
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-------------------------------------------------AGGGGCAACTCCTATCGCTA-----------
----------------------------------------------------------
