>input_sequence_78494
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---------ATGGGGACGATGACAAAAGGTCGCAAACGCGAAGCAGAGGCGTGGCTAGACTGTAGCGACAGCAGGACGGC
GAATGATAAAGTGGCCGGCGTCGGCCTTGGCGCGAAGCAGGGGAGGCGAAGCTCCTGCTCGGGGAGGTGCGGCAAGGGGA
ACCGCGTGGAGGCGCGGAGGAAGGCGGCAGCGGCGAATCGAGTCGGAGGTGAGCACGAGATGGCATCAGAGAGGGTACAG
TTGTTGCTACTGCCGACTCTGACGGAGGAGAGATCTGGTGGCGGAGCTGGCGAGGCGGCGGCGCCGGGTAGACGAGGAGG
CAGGCGAGGAGTAGAGGGACGACGGAGCGGAGCAGAGCA---GCGCCTCGGGTCTCGTGTAGGAGGTGGGGTCATGGTCG
TGATCGACCTC------GACCTCGTCAAGGGGATCGGGCGTCTCCCCTGGAGGCGTTGGGTGCAGTTCGCAGCGCTCA-G
GGGGGAATCGACAGGAAGGAGCGGGGGTTAG-------------------------------------------------
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------------------------------------------------
>chr4A_1_TraesCS4A01G110500
TCCGCCTCATGGCGGCGGAGTCTCGTCCCGAAAGCTTGTTTATGATTTTTTTTCCTCAATGAAAGATCCCATATAGCAGA
AGATGGGCATCGGAGGGCCACCAGGGGACCCACGAGGCAGGGGGCGCGCCCAGGAGGGTAGGGCGTGCCCCCACCTGAGT
GGTCCCCCTTTGATACTTCTTGCGCTCAGTATTTTTTATATATTATGAAAATAACTTCCGTGAAGTTTCAGGACTTTTGG
AGCTGTGCAGAATAGGTCCCTAATATTTGCTCCTTTTCAGCCCAGAATCCTAGCTACCGGCATTCTCCCTCTTTATGTAA
ACGTTGTAAAATAAGAGAGAATAGGCATAAGTATTGTGACATAATGTGTAATAACAACCCATAATGCAATAAATATCGAT
ATAAAAGCATGATGCAAAATGGACGTATCAGCAACTGGGTTCCCACGTGCCGAGAGCAAGGCAACAAGGAACGCGCAAGG
---AACAACTCGGACATGATGCAAACACGGGCATCTCATACAACACACATGCATTTGTTCACGGGCGTCGTCTTGG-GGT
TATACCTTCGAAGCGTGCAATCGGGACGGTTAGGGTTCGATGGGAT-GTAGTTGTTCACGGGCCATCGTGTGGAGTAGTT
GTACACGATGAT-TGTAGTGGAAGTAGTGGTACACATT-----TCGGAGAGGAACTTGACGAATCCGAGTAACTTTGGGT
CAACGGTAGTTGTACACGGAGAAGGTAGTGGTACATAGGTC--------------------------------------G
TACACGTTTGGGTCTTTGGTAGATGTGCTTGACGCATCACCGGGTGTACTCGTACATGAGGGTTTTGACGAATCCGAAGG
GTACTTGGTGATCCAAAATTGCTCCTGTTTGGGCAGGTACCGTGACAACAGCTCGAGGCCGAGGCCACGTGTGGGACGCG
CAAGGAGGTGTGAGAGCTAATGGTTTTGCATCCAGTGATAGTAACATGGGTGGACAAGGGGTCTCGATGGTGATAGTCAC
CTCGGGTCGATGGGGACGATGACAAAAGGTCGCAAACGCGAAGCAGAGGCGTGGCTAGACTGTAGCGACAGCAGGACGGC
GAATGATAAAGTGGCCGGCGTCGGCCTTGGCGCGAAGCAGGGGAGGCGAAGCTCCTGCTCGGGGAGGTGCGGCAAGGGGA
ACCGCGTGGAGGCGCGGAGGAAGGCGGCAGCGGCGAATCGAGTCGGAGGTGAGCACGAGATGGCATCAGAGAGGGTACAG
TTGTTGCTACTGCCGACTCTGACGGAGGAGAGATCTGGTGGCGGAGCTGGCGAGGCGGCGGCGCCGGGTAGACGAGGAGG
CAGGCGAGGAGTAGAGGGACGACGGAGCGGAGCAGAGCA---GCGCCTCGGGTCTCGTGTAGGAGGTGGGGTCATGGTCG
TGATCGACCTC------GACCTCGTCAAGGGGATCGGGCGTCTCCCCTGGAGGCGTTGGGTGCAGTTCGCAGCGCTCA-G
GGGGGAATCGACAGGAAGGAGCGGGGGTTAGGGATAGCGAGCGACAGAGACGGGGGATCGAGCGTGGGGCTCTCTGGCAG
TGCTAGGAGGGACAAAGGGGAGAGAGGGGATCGGGCAGAGGGTTCGCTAGGGTTAAAAGGGCAGCGGCTGGGCCTTAGGT
GCAGATGGGCCGGCCTGAGTTCTTGGATGGGCT---CTCTCTCTCTCTCCCTCATATTCTTTAGTAGAAAAGAGTTAGAC
AGAAGAAAA-GAAAAGT---------------AGGGTTAGGGAAAGAATTTGTGCATGCGAATAATTTTCCCGGACTCAT
AAAAATGAGCTTGATCCAAGAAAATAGAAA-GTGAGCGTGGGCGTG-GAGTTGAATTCCACCTCGTTTGAAT-TAACT-C
AAATGGGTTTGAACTAGGACTAGGATTT-AGAAGTGCCCAAAAATGTTGAGAATTTGTAAAGAGCCTCGATAGATA-GG-
-AAAGAGTTATAGGCAAGGTTAGAGAGTCAAAACTTGAAGAAGGAAAGGCCAAGGGATTTAACATGCAC--GTGT-GTTG
TGGTAAATTCCAAATTAATGGAATAT--A-ATTTTATAGCTCCCAAATAATATTGGGAGGA----TATATGTTATAAAGA
GAAATCATCAT-CTACATTTCCCTCGATTTAAATGGACCGAAGGTCCATACAATTTATTTATGAGAAAACATTTAAGTTG
GTA---------ATGATGACATGATGCAATGCAAAAGATGCCATGATG-AATGCAACAAACAAAATAAAACACATGGCAA
CAA-CGAAAGAACTGGAAGGCTTCTGGAGCGTCGGTCTTGGTTCGTTACAACTCTCCTCCACTTACAAGAGATCTCGCCC
CGAGATC-TAGGGATGGCACCGGAGAGAAGCGGAAGAT-----GAATAGGTAAAACAAAGTTGCTTCTTCGACAAACAAG
TGAAACCA-TGAACCTTGAGAG-GTTGAAAAATCTTGCAAGAAAAGAATACAACGGAGACAAACAAGATTGCAAATGGTT
CGTTGGACAAGAGGAACATGGAATATGATGATAACCAAGAGCTTAGGG
>chr4A_431
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------------------------------GCAACCGGGTTCCCATGTGTCGACGGCAAGGCAACAAGGAACGCGCAAGG
---AACAACTCGGGCATGGTGCAAACGCGGGCATCTCATACAACACACATGCGTTCGTTCACGGGCGTCGTCTCGG-GGT
TATACCTTCGAAACGTGCAATCGGGACGGTTCGGGTTCGATGGGAT-GTAGTTGTTCATGGGCCATCGTGGGGAGTAGTC
GTACACGATGATG-GTAGTAGAAGTAGTGGTACACGTT-----TCGGAGAGGAACTTGATGAATCCGAGTAACTTGGGGT
CTACGGTAGTTGTACACGGCGAGGGTAGTGGTACACAGGCC--------------------------------------C
TAGACATTCGGGTCTTCGATAGAGGTACTTGACGCATCACCGGGTGTACTCGTACATGAGGGTCTTGACGAATCCGAAGG
GTACTTGGCGATCCAAAATTGCTCCTGTTCGGGCAGGTACCGTGACAATAGCTCAAGGCCGAGGCCACGTGTGGGATGCG
CAAGGAGGTGTGAGAGATGATGGTTTTGCATCCAGCGATAGTAACAGGGGTCGACAAGGGGTCTCATTGGTGATAGTCAC
CTTGGGTCGACGGGGACGACGACAGAAGGTCGCAGATGCGTAG-----------CTGGACTACAGCGGCAGCAGGATGGC
GAAGGACGAAGTGGCAGGTGTCGGCCTTGGCATGAAGCACGGGAGGCGGAGCTCCTGCTCGGGGAGGTGTGGCAAGGGGA
ACCGCGTGGAAGCATGGAGGAAGGCGGCGGCAGCGAATCGAGTTGGAGACAAGCACGAGATGGCATGGGAGAGGGTGCAG
TTGTTGCTGTTGCCGACTCTAATGGAGGCGAGATCCGGTGGCGGAGCTGGCGAGGCGGCGGTGCCGTGTAGACGAGGAGG
CGGGTGAGGAGTAGTGGGACGATGGAGCGGAGCAGAGCA-----------------------------------------
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>chr7D_434
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---------------------------------ACCGGGTTCCCACGGGACGACGGCATGGCAAACTAGGAGAAACGTGT
AATAACAACTCGGACATGATGCAACCACGGGCATCTCATACAAC--ACATGCATTCGTTCATGGCGATCGGCCCGACGGT
TATACCTTCGAACCATGCATTTCGGGGCGGACGGGTTCGAAGTGGAAGTAGTTGTTCACGGGTCGTCGTGGGAAGTAGTG
GCACACGTGGCGGTGTAGTGGAAGTAGTGGTACACGTTCGTTTTTGGAGAGGTATTTGAAGAATCCAACGTCTTCGG---
-----------------GGCGACGGTAGTGGTACACGCGACGTCGGGGTACTTGTCGGTCTGGTCTTGGCGGTGTAGATG
TACACGTTGTCGG----------GGTACTTGTCGCATCACCGGGTGTAGTTGTACATGAGGGTCTTGACGAATCCGAAGG
GTACTTGGCGATCCAAAATTGCTCCTTTTCGGGCAGGTACCGTGACAACAGCTCGAGGC---------------------
--------------------------------------------------------------------------------
-TCAGGTCGATGGGGACGACGACAGAAGGTCGCAGACGCGAAGTAGGGGCGCGGCTGGACTGCAGCGGCAGCATGACGGT
GAAGGATGAAGTGGCCGACATCAGCCTTGGCGCGAAGCAGGGGAGGCGGAGCTCCTGCTCGGGGAGGTGCGGCAAGGGGA
ACCGCGTGGCGGCGCGGAGGAAGGCGGCGGCGGCGAATCGAGTCGGAGG-------------------------------
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>chr1D_482
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----ACAACTCGGACACGATGCAACAACGGGCATCTCATACAAC--ACATGCATTCGCTCATGGCGATCATCTCGTCGGT
TATACCTTCTAAGCATGCGTTTGGAGGCGGACGGGTTCGAAGTGGAAGTAGTTGTTCATGGGTCGTAGTGGGAAGTAGTG
GCACACGTGGCGGCGTAGTGGAAGTAGTGCTACACGTTCGTTTTCAGAGAGGTACTTGAAGAATCCAACGTCTTCGA---
-----------------GGCGACGGTAGTGGTACACGCGACGTCGAGGTACTTGTCGGTCCGATCTTGGCGGTGTAGATG
TACACGTTGTCGG----------G-TACTTGTCGCATCACCGGGTGTAGTTGTACATGAGGGTCTTGACGAATCCAAAGG
GTAATTG-CGATCCAAAATTGCTCCTGTTTGGGCAGGTACCGTGACAACAGCTCGAGGC---------------------
--------------------------------------------------------------------------------
-TCAGGTCGATGGGGATGACAACAGAAGGTCGCAGACGCGAAGCAGGGGCGTGGCTGGACTACAGCGGCAGCAGGAAGGT
AAAGGATGAAGTGGCCGGCATCGGCCTTGGCGCGAAGCAGGGAAGGCGGAGCTCCTGCTCGGGGAGGTGCGGCAAGGGGA
GCCGCGTGGAGGCGCGGAGGAAGGCGGCGGCGGCGAATCAAGTCGGAGGTG-----------------------------
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------------------------------------------------
>chr1A_1311
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-------------------------------------------------------------------------------G
CGGGCGAGGAGTAGAGGGACGACAGAGTGGAGCAGAGCAGCAGCGCCTCGGGTCTCGCGCAGGAGGTGGGGTCGTGGTCG
CGGTCGACCTCAACCTCGACCTTGTTGAGGGGATCAATCGTCTCCCCTAGAGGCATTGGGTGCAGGTGGCAGTGCTCATG
AGGGGGATCAAAAGAACGGAGCAAGGGTTAGGCATAGCGCGCGAGAGAGA--GGGGATCGAGCGTGGGGCTCTCTGGCGG
CGCTAGGAGGGACGAAGGGGATAGAGGGGATCGGGCAGAGGGTTCGCTAGGGTCAACCGGGCAGCGGCTGAGCCTTATGT
GCAGATGGGCTGGCCTGAGTTCTTGGCTGGGCTGCTCTCCCTGTTTCTCCCTCCT----TTAAATCTCTTCCAAATACGG
AAAAGCAAA-GAAAGAAGAGGAGAGAAAAGAAATGGGTGTACAAAGAATTTGGGCATGGGGATTATTTTCCCGGACTCAC
AAAAATATGCTTTGTCTAAGAAAATAGAAG--TTGGCACGAATGCAAGATTTAAATTCAAACTCATTTGAATATGATT-C
TAATGGGTTTGAATTAGCACTAGGTTTT-TGGTGTGGCTAAAAATGCTGAGATTTTTGGAGGAGCCTCATTAAAA-G-GA
GAAACAATTATCGGCATGGTTT-GGAGACCAAACTTGGAGCAAAAAAGGCAAGGAATTATT--TTGCAA--GTGTGGTTA
AGGGTGATTCCGAAATTGTGGAAT------ATTTATTAGCTCCCTAAAAATATTGGGAGG------ATATGTTATAAAGA
GAAATCACCAT-GTG-AATTCCCTCGATTTCAATAGATCAACGATCTATGCAATTTATTTAGTTGGGTTTTAAAAAGGGT
TG---------TATGATGACATGATGCAATGAAAATGATGCAATGATG-AATGCAGCAAACAAACAAAA-CACACAATGA
AACTCGGAGTACGTGGAAGGCATCTGGAGCGTCGGTCTCAGGTCATTACAACTCTCCTCCACTTACAAGAGATCTCGCCC
CGAGATC-TAGGGATGACAAC---------CGGAAGAGGAAGAGAAGAGGTAAAACTAAGTTGCTTCTTAGACAAACGAG
TGAAACCA-TGAACCTTGAAAC-GTTGCAAA-------------------------------------------------
------------------------------------------------
>chr4A_1360
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---------------------------------------------------GTCTCGCGCAAGAGGTGGGGTCGTGGTCG
CGGTCGACCTC------GACCTCATCAAGGGGATCGGGCATCTCCCCTAGAGGCGTTGGGTGCAGTTGGCAGTGCTCA-G
GGGGGGATCGAGATGAAGGAGCGGGGGTTAGGTATAGCGAGCGAGAGAGATGGGGGGTCGAGCGAGGGGCTCCCTGGCAG
CGCTAGGAGGGATAAAGGGGAGAGAGGGGATCGGGCAGAGGGTTCACTAGGGTTAACAAGGCAGCGGCTCGGCCTTAGGT
GTAGATGGGCCGGCCTAAGTTCTTGGCTGGACT---CTCTCTCTCTCTTGCTCATATTCTTTAGTATAAAAGAATTAGAG
AGAGGAAAA-GAAAGAG---------------AGGGTTAGGGAAAGAATTTGCGCATGCGGATAATTTTCCCGGACTCAT
AAAAATAAGCTTGATCCAAGAAAATAGAAA-GTGAGTGTGGGTGTG-GAGTTGAATGCCACCTCATTTGAAT-TAATT-C
AAATGGATTTGAACTAGGACTAGGATTT-AGAAGTGCCCAAAAATGTTGAGAATTTAGAAAGAGCCACGATGGAT-GGG-
-AAAGAATTATAGGCAAGGTTGGAGAGTCAAAACTTGAAGAAGGAAAGGCCAAGGGATTTAACATGCAC--GTGT-GTTG
TGGTAAATTCCAAATTAATGGAATAT--A-ATTTTATAGCTCCCTAATAATATTGGGAGGA----TATATGTTATAAAGA
GAAATCACCAT-GTACATTTCCCTCGATTTAAATGGATCGGAGATCCATACATTTTATTTATGGGAAAACATTTAAGTTG
GTA---------ATGATGACATGATGCAATGCAAAAGATGCCATGATG-AATGCAACAAACAAACAAAAACACATGGCAA
CAA-TGAAATAACTGGAAGGCTTCTGGAGCGTCGGTCTTGGGTCGTTACAA-----------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr1A_1451
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--------------------------------------------------------------------GCAGCGGTCAGG
AGGGGGATCGAGAGGATGGAGCCGGGGTTAGGGATAGCGAGCGAGAGAGAT-GGGGATCGAGCGTGGGGCTCTTTGGCGG
CGCTAGGAGGGATGAAGGGTACAGAGGGGATCAGGCAGAGGGTTTGCTAGGGTTAACCTGGCAGCGGCTGGGCCTTAGGT
GCAGATGGGCTGGCTTGAGTTCTTGGCTGGGCTGCTCTCCCTCTTTCTTCCTCCT----TTAAATCTCATCGAAATACAG
AAATGCAAA-GAAAGAAGAGGGGAGAACAGAAATGGGTGGACAGAGAATTTGGGCATGGGGATTATTTTCACGGACTCAC
AAAAATATGCTTAGTCTGAGAAAATAGAAG--TTGGCACGAATGGAAGATTTAAATTCAAACTTATTTGAATATCATT-C
AAATGGGTTTGAATTAGGACTAGGTTTTTTGGTGTGGCCAAAAATGTTGAGATTTTTGGAGGAGCATCAATAAAT-G-GA
-TAAACAATATTCGCAAGGTTT-AGAGACCAAACTTGAAGCAGAAAAGGCACGGAATTATT--TTGCCA--GTGTGTTTA
AGGGTCATTCCAAAATAGTGGAATAT--T-TA---TTAGCTCCCTAA-AATATTGGGAGG------ATATGTTATAAACA
GAAATCACCAG-GTG-AATTCTCTCGATTCCAATAGATCAACGATCTATGCAATTTATATAGTTGTGTTTTAAAAAGGGT
TA---------CATGATGACATGATGCAATGCAAATGATGCAATGATG-AATGCAACAAACAAACAAAT-CACACAAAGA
AACTCGGAGTACATGGAAGGCATCTGGAGCGTCGATCTCAGGTCGTTACAACTCTCCTCCACTTACAAGAGATCTCGCCC
CGAGATC-TAGGGATGACAAC---------CGAAAGAGGAAGAGAAGAGGTAAAACTAAGTTTCTTCTTAGACAAACGAC
TGAAACCA-CAAACCTTGAAAG-GTTGCAAAGATG--AAG--AAATGACACAAAGGAGATGAACAAAGTTGAAAGC---C
TGTTAGAAAAGAGGAA--------------------------------
>chr5D_1549
AGGGAACAAGG---------------------------------------------------------------------
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---------------------GAGAGGGGGTCGAGCAGAGGGTTCGCTAGGGTTA-CAGGGCAACGGCTGGGCCTTTGGT
GCAGATGGGCCGGCCTGAGTTCTTGGCTGGGCT---CTCTCTCTCC--CCCTCATATTCTTTAGCAGAAAAGAATTAGAG
AGAAGAAAA-GAAAGAG---------------AGGGTTAGGGAAAGAATTTGCACATGCGGATAATTTCCCCGGACTCAT
AAAAATAAGCTTGATCCAAGAAAATAGAAA-GTGAGCGTGGGCATG-GAGTTGAATTCCACCTCATTTGAAT-TAATT-C
AAATGGGTTTGAACTAGGACTAGGATTT-AGAAGTGCCCAAAAATATTGAGACTTTAGGAGGAGCCTCAATAAAA-GAGA
-TAAGAATTATTGGCAAAGTTTGAGGCAGGG-AATTGAGTAG--AAAAAGCATGGAAGTTTAACTGCAG--GTGT-GTTA
TGGTGATTCCAAAGTTA--GGAATAT--T-TTAATATAGCTCCCTAATAATATTGGGAGACT-TTTATATGTTGTAAAGA
GAAATCACCAT-GTGCATTTCCATCGATTTAAATGGACCGAAGATCCATGCAATTTATTTAGCTGAGTTTTAAAGGGGGT
----------GCAACATGACATGATACAATGCACATGATGCAAAGATG-AATGCAACAAACCAAACAAATCTCACGACGA
ATCTCAAAATCCACGGAAGGCATCTGGAGCGTCGGTCTTGGGGCGTCACAACTCTCCTCCACTTACAAGAGATCTCGACT
CGAGATC-TAAGGATGGCACCGGGGAGAAACAGAAGAG-----GAAGAGGTAAGACAAAGTTGCTTCTTTGACAAACGAG
TGAAACCAATGAACCTTGAGAG-GTTGAAAACTTG--AAAGAA-------------------------------------
------------------------------------------------
>chr4B_1608
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------------------------------------------------------------------GCTTGGCCTTGTGT
GCAGATGGGCCGGCCTGAGTTCTTGGATTGGTTGCTCTCCCTCTTTCTCGATCCT----TTAAGTCTCTTGCATATATAG
AAAAGAAAA-TAAAGAAGAGGAGTGAAAAGAAATGGGTGGAGAAAGAATTTGGGCATGGGGATTATTTTCCCACACTCAC
AAAAATGCGCTTGTCCCAAGAAAATAGAAG--TGTGCATGTGTGTGAGGTTAGAATTCAAACTAATTTGAATTTAATT-C
AAATGAGTGTGAGGAAGAAGTGGGTATG-CGGTAGGTTGAAAAATGTTGAGAATTTTGGTGGAGCTCGGGAAAAT-GATG
-AAAGAATTTATTGCAAAGTTTG-GAGACCAAACTTGAAGCAGAAAAGGCACGGAATTATT--TTGCAA--GTGC-GTTA
TGGTGGATCCCAAATTAATGGAATAT--T-TTATTATATCTCCTTAATAATATTGAGAGACTCTGTATATGTTATAAAGA
GAAATCACCATTGTGAATATCCCTTGATTTAAATGGACCAAAGACCCATACGATTTATTTATTTGAGTTGCAAAAGTTAA
TGAGATGAA-GCATGATGACATGATGCAATGCAAATGATGCTATGATG-AATGCAACAAACAAATAAAT-CACATGGCGA
CAA-CGAAATACATGGAAGGCTTCTGGAGCGTCGGTGTCGGGTCGTCACAACT---------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr7A_1653
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-------------------------------CT---CTCTCTTTCTCTCTCTTATTTTCTTTAGCAGAAAAGAATTAGAG
AGAAGAAAAAGAAAGAG---------------AGGGTTAGGGGAAGAATTTGAGCATGGGGTTAATTTTCTCAGACTCGG
GAAAATGAGCTTAATCCAAGAAAATAGGAA--TGGGCATGGATGCAAGGTTTAGATTCAAACACATTTGGATTTAATT-C
AAATGGGTG--AATAGGGAGTGGGGGTT-TGGAAGGTCCAAAAATGTTGAGAATTTGGGAAGAGCCTTGATAAAA-GAGA
-TAAGAATAGTTGGCAAAGTTTGGGGATCAA-ACTTGAAGTAGAAAGGGCATGGGAATTCT--TTGCAAGTGTGT-TTAT
GGGTGATTCCAAAGTTAATGGGATAT--T-TTAATATAGCTCCCAAATAATAGTAGGAGACT-TGAATATGTTTTAAAGA
GAAATCACCAT-GTGCATTTCCCTCAATTTAAATAGATCAACAATCTATGCAATTTATTTATGAGAAAACATTTAAGTTG
GTA---------ATGGTGACATGATGCAATGCAAAATATGCAAAGATG-AATGCAACAAACAAAACAAATCACATGACGA
ATCTCGGAATACAAGGAAGGCACCTGGAGCGTCAGTCTTGGGGCGTTACAACTCTCCTCCACTTACAAGAGATCTCGCCC
CGAGATC-TAGGGATGCCACCAGAGAGAAGTGGAAGAG-----GAAGAGGTAAAACAAAGTTGCTTCTTTGACAACTGAA
TGAAACCA-CGAACCTTGAGAG-GTTGAACAAATTGAAAG--AAAGAATACAATGGAGATGAACGAAGTTGGAAACACAC
CGTTAGAAGAGAGGAACAAGGAATAT----------------------
>chr4D_1655
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------------------------------------CTCTCTCTCTCTCCCTCATATTCTTTAGCAGAAAAGAATTAGAG
AGAAGAAAA-GAAAGAG---------------AGGGTTAGGGAAAGAATTTGCGCATGGGGGCAATTTTCCCGGACTCAT
AAAAATGAGCTTGATCCAAGAAAAATAGAAAGTGAGCATGGGCGTG-AAGTTGAATTCCAACTCATTTGAAT-TATTTTC
AAATGAGTGTAGGAAGGAAGTGGGTATT-TGGTAGATCCAAAAATGTTGAGAATTTTGGAAGAGCCTCGATAAAT-GAGA
-TAAGAATTGTTGGCGAAGTTTGAGGCAAGG-AATTGAAGTAGAAAAATGCATGGAACTTAAACTGTAA--GTGT-GTTA
TGGTTTATTCCTAAAGGATGGAAGAT--T-TTATAATAGCTTCC---TAATATTGGGAGG------ATATGTTATAAAGA
GAAGTCACCC--------TTCCCTCGACTTAAATGGATCGAAGATCCATACAATTTATTTCAAAGTGTTATACAA-TTAA
TGATATGATGGCATGATGACATGATGCAATGCAAGAGATGACATGAAGCAATGCAACAAACAAATAAATACACACGACAA
TAA-CGAAACACATGGAAGTCGTCTGGAGCGTCGGTCTCGGGTTGTTACAACACTCCTCCACTACAAGAGGATCTCGTCC
TGAGATC-TAGG-ATGGCACCGGAGAGAAACGGAAGAGGAAGAGAAGAGGTAAAACTAAGTTGCTTCTTTGACAAACGAG
TGAAACCA-CGAACCTTGAGAG-ATTGAA---------------------------------------------------
------------------------------------------------
>chr1A_1664
TCTCCTCTC-----------------------------------------------------------------------
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------------------------------------------------------TATTCTTTATCAAAAAAGCATTAGAG
AGTAGAAAA-GGAAGAG---------------AGGGTTAGGGAAAGAATTTGAGCATGGGGTTAATTTTCCCGGACTCAT
AAAAATGAGCTTGATCCAAGAAAATAGAAG--TGAGTGTGGGCGTGAAGTTTGAATTCCACCTCATTTGAAT-TAATT-C
AAATGGGTTTGAACTAGGACTAGGATTT-AGAGGTTCCCAAAAATGTTGAGAATTTAGAAAGAGCCTTGATAGAT-G-GA
-AAAGAATTATAGGCAAGGTTAGAGAGTCAAAACTTGAAGAAGGAAAGGCCAAGGGATTTAACATGCAC--GTGT-GTTG
TGGTAAATTCCAAATTAATGGAATAT--A-ATTTTATAGCTCCCTAATAATATTGGGAGGA----TATATGTTATAAAGA
GAAATCACCAT-GTACATTTCCCTCGATTTAAATGGATCGAAGATCCATACAATTTATTTATGAGAAAACATTTAAGTTG
GTA---------ATGATGACATGATGCAATGGAAATGATGCAATGAAG-AATGCAACAAACAAAACAAATCACACGGCAA
CAA-TGAAATAACTGGAAGACTTCTGGAGCATCGGTCTTGGGTCATTACAAACTCCCCTTCA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr1B_1701
AAGGAGAGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------AAAGAA---------------GATGTTAGAGAAGCAATTTGGGAATGGAGT-AAATTTCCTGGGCTCAC
CAAAATGGGCTTGATCCAGAAAAATTGCAA--CGAGACGTGTCGAAGGGTTTGAATACAACCTCATTTGAATTACATT-C
AAAAGAGTTTAAATAGGAAGTGGGAGTT-TGGAAGGTCCAAAAATGTTCAGATTTTTGGTGGAGCTTGGATGTGAGA-CA
-AAAGAATTATCGACAAAGTTTGGGGACCAA-ACTTGAAGTAGGGAAGGCATGAGAA-TTAAATTGTAA--GTGT-GTTA
TCGTGTTTCCAAAGTTAATGGCATATTTT-TTAATATAGCTCCCTAATAATAGTAGGAGGCT-TGATTATGTTTTAAAGA
GAAATCATCAT-GTGCATTTCCCTCAATTTAAATGGATCAGAGATCCATGCAATTTATTTATGAGAAAACATTTAAGTTG
GTA---------ATGATGACATGATGCAATGCAAATGATGCAATGATG-AATGCAACAAACAAAACAAATCACCCAACGA
AACTCGGAATACTTGGAAGGCATATGAAGCGTCGGTCTTGGGGCATCACAACTCTCCCACACTAACAAAGGATCTCGACC
CGAGATCCTAGGGATGGCATCGGAGAGAAATAGAAAAG-----GAAGAGGTAAAACGAAGTTGCTTCTTTGACAAACGAA
TGAAATCAACAAACCTTTGAAATGTTGAACAACTTGAAAG--AAATAATACAACGGAGATGAATGAGATTGCAAACAATC
TGTTAGAAAAGAGGAACAAGGAACATTACGAGAACC------------
>chr6A_1717
--------------------------------------------------------------------------------
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----------------------------------GGTTAGAGGAAGAATTTGGACATGCGGTTAATTTTCCTGGACTA--
AAAAAAGAGTTTGATCCAAGAAAAATAGAA-GTGAGCACGTGCGTG-AAGTTGAATTCAAACTCATTTGAATATAATT-C
ATATGAGTTTGAACTAGGACTAGGATTT-AGAAGTGCCCAAAAATGTTGTGAATTTAGAAAGAGCCTCGATAGATGG-GA
-AAAGAATTATAGGCAAGGTTAGAGAGTCAAAACTCGAAGAAGGAAAGGCCAAGGGATTTAACATGCAC--GTGT-GTTG
TGGTAAATTCCAAGTTAATGGAATAT--AATTTTTATAGCTCCCTAATAATATTGGGAGGA----TATATGTTATAAAGA
GAAATCACCAT-GTACATTTCCCTCGATTTAAATGGATAGAAGATCCATACAATTTATTTATGAGAAAACATTTAAGTTG
GTA---------ATGATGACATGATGCAATGCAAATGATGCAATGATG-AATGCAACAAACAAAACAAATCACCTGACCA
AACTCGGAATACATGGAAGGCATCTGAAGCACCGGTCTCAGGTCGTTACAACTCTCCTCCACTTACAAGAGATCTCACCC
CGAGATC-TAGGGATGGCACCAGAGAGAAGCAGAAAAG-----GAAGAGGTAAAACAAAGTTGCTTATTTGACAAATGAG
TGAGACCA-TGAGCCTTGAGAG-GTTGAACAAATTGAAAG--AAAGAACACAATGTAGATGAACGAGAATGCAAACACTC
CATTAGCAAAGAGGAACAAGGAATACCACAAGAACCAAGAACT-----
>SNPs
--S--SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------S---SS-------------------------
-------------------------------------------------------S-----------------S------
-------------------------------S--------------------------------------S--------S
-----------------------------------S-----------------------S---------------S----
-S-----------------S--S------------S---S----------------------------------------
--------S-------S-S----S--S------------------------------------S----------------
--------S-------------------------------------------------------------------S---
----------------S-S----------------S----------S----S-------------SS-------------
-------------------S----S---------S-----------S---------S-----S----S------------
---S---S----------------------------------------S-------------------------------
----------------------------S-------------------------------------SS--------S---
--------SS----------S-S-----S------S-------------------------S----S-------------
-S-------------------------------------------------------S-S-------------S------
S-S---------------------------------------------S------------------S------------
-----S-----S--------------------------------S-----S-----------------------------
S-------------------------------------------------------S-----------------------
-------------------------------------------------------------------------S-----S
--------------SSS-----------------------------------S-------S-------------------
----------------------------------------------------------------S-----------S---
---------------------------------------------------------S-----------------S----
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------------------S------------------------------------
-----------------------------------------------------------------S--------------
---------S-------------------------------S--------------------------------------
-------------------------------------S--------S----------------------S-------S--
---------------------------------S-SSS---------------------SS--------------SSS-S
----S--S----------S-------S-S--S--------S--SSSSS
>forward_38
------------------AGTCTCGTCCCGAAAGCTTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_1277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACAG
TTGTTGCTACTGCCGA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_310
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAGCTACCGGCATTCTCCCT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_1420
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TAGGAGGTGGGGTCATGGTC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_1301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGTTGCTACTGCCGACTCTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_2556
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGGTT
CGTTGGACAAGAGGA---------------------------------
