>input_sequence_78482
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------------------------------------------------------------------------------AT
GACAATGAGGCCGCTCGTCCTTCTTGCCCTGGCCGCCGTGCTCGCAGCCGGTATCGGCAGCGCTGAGGGAGCTGGCGAGT
GCGC--------GAGGGCCATCGCCAGGGTCCCGCAACTGGCTCGGTGCGCCCCGGCGGGGCGCAACCCGCAGTCCGCGC
CGACGGCCATCTGCTGCGTGGCGGTGCGCAAGGTCAGCATGGCGAGCCCCGATTGCGTGTGCGCCGTCTTCCTGAACGAC
GCCTTCAAACTGTTGGGAGTGAAGCCTGAGGTCGCACTCACGATCCCCAAGCGCTGTGGCATAGCCGACTGCGGAGGTAC
GTGCGCACATAC-------ATACGTAGGCGTATGCTAGTAGATTAGTACTAGTATACTCCTACTTCTCAACGAGATAT--
----------AATAATGCCTAGCTTTTCTTTCTTGGAGC---TGAATATTGTTCTGAAATTGTTGGCAATATATTGCTCA
ATCCAGCTTATTTGATTTCGCAGATAACACGTTTCCTTGA----------------------------------------
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---
>chr2B_1_TraesCS2B01G452100
GCGGGAACCCGTGCGAGTGAGTGAGGAGGGTGGTGGGTGGGTCGGGGTGGTCAGAAGCGGGGTGATGTCCGGACACTCGC
AAAGCCCTCATATAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTCGCTAAAACTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACGTAAAGAATACGACAAAAAGATTAACCGGGAATTTAACA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGGTTGGGCCTTGTGCTTGAACGCAA
GGTGTTTAGTGGCTGT-TT--TT-ACTACCCATCAAGAAACACTGATTCTTTTACCGAGCCTAGCGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGTCCTGCAAACGATCTTAAACTAAAGCTCG-GCTCGACTCGTTATTGTTCGAGTTC
GAGTCAATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTACCCTCATACAT
TTGTCTCCGATTTTCGGGAGAAAGTGCGTCCAAACCAGCTTGTGGACCAATCGCTTTGGATGGCATAACACGTCCGGGTC
GTGAGGATGGTTTGAGGGTCGGATTGAAGATGCCATAAGGGGACGCGGAAATAATAACTCGCAAACGTGTTCTGCATTGT
GGA--AAAACGGAGAAACCATTAGCACAGTCAGCATGCAATCAGAGA--GCCTGCGGTGCTTCCTCCTACTTGCCACAAC
GGCAGTACGGCTATATAAGAAGCACCACCCATGTAT--------ACCCACGGCAAGCAGCTAGCTACG-------AGCGA
TCCGCACTAACGTTGTACAGTAAGAACTACTAGTACAG---------GTGAAGCCATCAGAGCAACACGGGGAGATCGAT
GACAATGAGGCCGCTCGTCCTTCTTGCCCTGGCCGCCGTGCTCGCAGCCGGTATCGGCAGCGCTGAGGGAGCTGGCGAGT
GCGC--------GAGGGCCATCGCCAGGGTCCCGCAACTGGCTCGGTGCGCCCCGGCGGGGCGCAACCCGCAGTCCGCGC
CGACGGCCATCTGCTGCGTGGCGGTGCGCAAGGTCAGCATGGCGAGCCCCGATTGCGTGTGCGCCGTCTTCCTGAACGAC
GCCTTCAAACTGTTGGGAGTGAAGCCTGAGGTCGCACTCACGATCCCCAAGCGCTGTGGCATAGCCGACTGCGGAGGTAC
GTGCGCACATAC-------ATACGTAGGCGTATGCTAGTAGATTAGTACTAGTATACTCCTACTTCTCAACGAGATAT--
----------AATAATGCCTAGCTTTTCTTTCTTGGAGC---TGAATATTGTTCTGAAATTGTTGGCAATATATTGCTCA
ATCCAGCTTATTTGATTTCGCAGATAACACGTTTCCTTGATGGCCTACCTATCAAAATTGCACGACGTACGTGCGTGGAA
GGCTTTGTGTGAGAATAAAAAACGAGTCATGCGCATGAATGGAATTGGCGGCGGATGTTA-GTCGTTGGCCTGCTCTG-T
TCCATCCTTATTCAAACTTGTAACAATGGATATCTTTT-ATATATTGCATCTTTCCAGTTTAGAACTTTAGAAGGTTCAC
GTGTATCTCTAGGTTGACGATTTAAGAGCACCTACACGTCTAGATAGCAAATCCAGTCTCTCAAACGCCCGCGCACGCCC
AGGTGCGGTCGGCACGACTCATTTATTGGCTTCCACACCCGTATCCCTTATATTCGAATTCTCAAAACCATGCTACCCAT
ACAACACTGCGTAAAACACGATCAACGCGCAGCTCATCGGATCAACATTGCATCGGCGGGCAAAAGGAGCATAGTTCATT
GGAGTTCAACGGTAAATCCATACTAAACAACTTAAAACATAGTTAAAATTTAAACAGAACAAGGAAGGGTGGAGGAGATC
ACCATTTCCTCACCGGCCCCTTCCCCTTCTGGTCGTCGGCGCGGTTGTGCCCCTCCTCTGACAACTCCAAGGCGAGTCGG
AGCATCTTGGCATTCTTGCGGCGGAGGACCGACACGAGGGGCGCAACCTCGGGATCGACCGGCGCGCTCACGCGCGAATG
GCACGCGGACATCGCCTCCCCCCTCTCCCTCGCCCGCTACTGCTCACGCTGGGTTGCACGTGCCTCGGACTTGGGCATCC
TCCTGTGCGTCGGCCCTAGCGCGGGCACGAGGACCCAGCGGTGGCCGGGTACCACTTTCGTACTAGTGGGTTGTGGAGGT
GGGCGGCATACCTGAAGGAGCAGAGTAGAGTTGTGCGCCGGGCGGGAAGGGCCAGCGACGTCGCCGGCGCTGCGTTGACG
GGCGACGGGCACTGAGGAAGACGATCCACTATTCTCGAGGCCGCCTTGCTCGAGCATCGACCTCCTCAAGGCGATGCGAG
GGC
>chr7A_87
CTCAGC--------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCTAGCTCGACTCGACTCGCTAAAGCTTGTTTCATTAACAAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTTAAATCCAAGATTGGCTCGACTCG--TATAACTCGTGAGCTGGCTCG
-TTTAGCATGTTAAGCTTGTTAAAGATATGAACATTAGA-CCTTACAAATACGATAAAAATATTAACTGAGAATTTAGTA
TGTGCATATGTGGTCATGTAC--GTGTGAGTCTCTTGGGTGACTCGGCC--GAGCGGCTGGGCCTTGTGCTGGGACACAA
GGTGTTTAGTAGCTATATT--TT-ACTACTCCTG--AAAATATTGATTTTTTTACCGAGCTTAACGAGTTACCCGAGTAC
TCATGAGATCAGCTCGTTTAACTTGGTGTGTAAACAATCTTAAACTAAAGCTCA-GCTTGGCTCGTTATTCTTCGAGTTC
GTGTCGATTCGAGTCAAGTCACAAGCTACTCATTTAGCTCGCGAGTTTCGAGTTTTTTT-CCAGTCCTACTCTCA-----
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---
>chr1B_88
TCATT---------------------------------------------------------------------------
-------------AGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGAATCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCTTGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTAAAGAATACGACAAAAAGATTAACCGGGAATTTAACA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGGTTGGGCCTTGTGCTTAGACGCAA
GGTGTTTAGTCGCAGT-TT-TTT-ACTACCCATCAATAAACACTAATTCTTTTACCGAGCCTAGCGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGTCATGTAAACGATCTTAAACTAAAGCTCG-GCTCGACTCATTATTGTTCGAGTTC
GAGTCAATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr3A_92
--------------------------------------------------------------------------------
-----------ATAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTTGCTAAAACTCGTTTCATTAATGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGTGAGCTGTCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATTAGA-CCTTGCAAATACGATAAAAAGATTAACTAAGAATTTAACA
TGTGCATATGTGGTCTTGTAC--GTGTGATTCCCCTGGGTGGCTCGGCCTTGAGCGGCTGGGCCTTGTGTTGGGACACAA
GGTGTTTAGAGGCTGT-AT-TTT-ACTATCCCT-AAAAAACATTGATTTTTTTATCGAGCTTAACGAGTTACTCGAGTAC
TCGTGAGATCGGCTCGTTTAACTTGGTATGTAAACAATCTTAAACTAAAGCTCG-GCTCGGCTCGTTATTCTTCAAGTTC
AAGTCGATTCGAGCCGAGTCACGAGCTACTCGTTTAGCACGCGAGCTTTGAGTTTTTTTTCCAGCCCTAGCCT-------
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---
>chr6A_92
--------------------------------------------------------------------------------
-----------ATAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATTCAAGATTGGCTCGACTCG--TATAACTCACGAGCTGGCTTG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATTAGA-CCTTACAAATACGATAAAAATATTAACTAAGAATTTAGCA
TGTGCACATGTGGTCATGTAC--GTGTGAGTCTCCTAGGTGGCTCGGCCTTGAGTGGTTGGGCCTTCTGCTGGGACGCAG
GGTGTTTAGTGATTGT-AT-TTT-ACTACCCCTAAAAACATTA-AATTTTTTTACCGAGCTTAACGATTCACCCGAGTAC
TCGTGAGATTGGCTCGTTTAACTTGGTATGTAAACGATCTTAAACTAAAGCTTTTGCTCGGCTCGTTATTCTTCGAGTTC
GAGTCAATTCGAGCCGAGTCATGAGCTACGTGTTTAGCTCACGAGCTTCGAGCTTTTTTTCCATCCCTACACTC------
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---
>chr5D_92
--------------------------------------------------------------------------------
-----------ATAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTTGACTCGCTAAAGCTCGTCTCATTAACGAG
CTAGCTCGAATCGACTCGTTACTATAACAAGCTCAAATCCAAGATTGGCTCAACTCG--TATAACTCGCGAGTTGACTCA
-TTTAGCTTGTTAAGCTTGTTAAAGATATGTACATAAAA-CCTTACAAATACGATAAAAAGATTATCTGGGAATTTAAAA
TGTACATATATGGTCATGTACCCATGTGAATCT--------------CCTC--GTGGTTGGGCCTTGAGCTGGGACACAA
GGTGTTTAGTGGTTGT-TTTTTT-ACTACCCCTAAAAAACAATCATTTTTTTTACCGAGCCTAACGAGTTACACGAGTAC
TCGTGAGATCGGCTCGTTTAACTTGGTCTATAAATGATATTAAACTAAAGCTCG-GCTCGACTCGTTATTGTTCGAGTTC
GAGTCGATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCTAGCTTCGAGCTTTTTT-CCAGCCCTA-----------
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---
>chr2B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCAACTCGCTAAAGCTCATTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTAAAGAATATGACAAAAAGATTAACCAGGAATTTAACA
TGGACATATATGGTCACGTAC--ATGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGATTGGGCCTTGTGCTTGGACGCAA
GGTGTTTAGTGGCTGT-TT-TTT-ACTACCCATCAAGAAACACTGATTCTTTTACCGAGCCTAGCGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGTCCTGTAAACAATCTTAAACTAAAGCTCG-GCTTGACTCGTTATTATTCGAGTTC
GAGTCAATTCGAGCCGAGTCACGAGCTACTCGTTTAAATCACGAGCTTCAAGCTTTTTTTCCAGCCCTA-----------
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---
>chr2B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTTGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTCACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
TTTTAGCTTGTTAAGCCCGTTAAAGATATGAACATAAA--CCTGAAGAATACGACAAAAAGATTAACTAGGAATTTAACA
TGGACATATATGGTCATGTAT--GTGTGAGCCTCCTAGGTGACTAGGCCTG--GCGGCTGGGCCTTGTGCTTGGACGCAA
GGTGTTTAGTGGCTGT-TTCTTT-ACTACCCATCAAGAAACACTGATTCTTTTACCGAGCCTAACGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGTCCTGTAAACGATCTCAAGCTAAAGCTCG-ACTCGACTCGTTATTGTTCGAGTTC
GAGTCAATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr6B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCAGAGTCGAGCCAGCTCGACTCAACTCGCTAAAACTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGTTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTAAAGAATACGACAAAAAGATTAACCGGGAATTTAACA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGGTTGGGCCTTGTGCTTGGACGCAA
GGTGTTTAGTGGTTGT-TT--TT-ACTACCCATCAAGAAACACTGATTCTTTTACCGAGCCTAGCGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGTCCTGTAAACGATCTTAAACTAAAGCTCG-GCTCGACTCATTATTGTTCGAGTTC
GAGTCAATTCAAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTAC----------
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---
>chr1B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCTAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATACAAGATTGGCTCGACGCG--TATAACTCACGAGCTCGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTAAAGAATACGACAAAAAGATTAACAGGGAATTTAAGA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGGTTGGGCCTTGTGCTTAGACGCAA
GGTGTTTAGTGGCTGTGTT--TT-ACTACCCATCAAGAAACACTAATTCTTTTACCGAGCCTAGCGAGTTATAAGAGTAC
TTGTGAGATCGGCTCGTTTAACTCATCATGCAAACGATCTTAAACTAAAGCTCG-GCTCGACTAGTTATTGTTCGAGTTC
GAGTCAATTCGAGCTGAGTCACGAGCTACTCGTTTAGCTCGTGAGCTTCGAGCTTTTTT-CCAGCCCTA-----------
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>chr3B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTTGACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTAGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAATATATGAACATAAAAATCTAAAAAATACGACAAAAAGATTAACCGGGAATTTAACA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGGTTGGGCCTTGTGCTTAGACGCAA
GGTGTTTAGTGGCTGT-TT-TTT-ACTACCCGTCAAGAAACACTAATTCTTTTACCGAGCCTAGCGAGTTATACGAGTAC
TTGTGAGATTGGCTCGTTTAACTTGTCATGTAAACGATCTTAAACTAAAGCTCG-GCTCGACTCGTTATTGTTCGAGTTC
GAGTCAATTCGAGCCGAGTCACGAGCTAGTCGTTTAGCTCGGGAGCTTCGAGCTTTTTTTCCAGCCCTAC----------
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>chr4B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGTTCAAATTCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-CTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTGAAGAATACGGCAAAAAGATTAACGGGGAATTTAACA
TAGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGCGCTTGGGCCTTGTGCTTGGACGCAA
GGTGTTTAGTGGCTGT-TT-TTT-ACTAGCCATCAAGAAACACTGATTCTTTTACCGAGCCTAATGAGTTATACGAGTAC
TTGTGAGATCGACTTGTTTAACTCGTCATGTAAACGATCTTAAACTAAAGCTCG-GCTCGACTCGTTATTGTTCGAGTTC
GAGTCATTTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr5B_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAATGAG
CTAGCTCGACTCGACCCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGTGAGCTAGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTAAAGAATACGACAAAAAGATTAACCGGGAATTTAACA
TGGACATATATGGTCATGTAC--GTGTGAGCCTCCTAGGTGACTAGGCCTTGAGAGGTTGGGCCTTGTGCTTAGACGCAA
GGTGTTTAGTGACTTT-TT-TTT-ACTACCCATCAAGAAACACTAATTGTTTTACCGAGCCTAGCGAGTTATACGAGTAG
TTGTGAGATCGGCTCGTTTAACTCGTTATGTAAACGATCTTAAACTAAAGCTCG-GCTAGACTCGTTATTGTTCGAGTTC
GAGTCAATTCGAGCCAAGTCACGAGCTACTCTTTTAGCTCGCGAGCTTCAAGCTTTTTTTCCAGCCCTA-----------
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>chr4D_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACAAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCA
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATAAAAACCTTACGAATACGACAAAAAGATTAACTGGGAATTTAACA
TGGACATATATGGTCATGTAC--ATGTGAGTCTCCTGGGTGACTAGGCCTTGAACGGTTGGGCCTTGTGCTTGGACGCAA
GGTGTTTAGTGGCTGT-TT-TTTTACTACCCATCAAGAAATGGTGATTCTTTTACCGAGCCTAACGAGTTATACGAGTAC
TTGTGAGATCGGCTCGTTTAACTCGGCCTGTAAACGATCTTAAACTAAAGCTCG-GATCGACTCGTTACTGTTCAAGTTC
AAGTCAATTCGAGCCGAGTCACGAGCTACTCATTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr3A_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTTGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCTAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAACTTGTTAAGCTCGTTAAAGATATGAACATTAGA-CCTTACACATACGATAAAAAGATTAACTAAGAATTTAACA
TGTGCATATGTGGCCTTGTAC--GTGTGAGTCCCCTGGGTGGCTCGGCCTTGAGCGGCTGGGCCTTGTGCTGGGACGCAA
GGTGTTTAGAGGCTGT-AT-TTT-ACTATCCCT-AAAAAACATTGATTTTTTTATCGAGCTTAACGAGTTACCCGAGTAC
TCGTGAGATCGGCTCGTTTAACTTGGTATGTAAACGATCTTAAATTAAAGCTCG-GCTCGGCTCGTTATTCTTCGAGTTC
GAGTCGATTCGAGTCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr3A_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCTACTCGACTCGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATTAGG-CCTTACAAATACGATAAAAAAATTAACTAAGAATTTAACA
TGTGCATATGTGGCCTTGTAC--GTGTGAGTCCCCTGGGTGGCTCGGCCTTGAGCGGCTGGGCCTTGTGCTGGGACGCAA
GGTGTTTAGAGGCTGT-AT-TTT-ACTATCCCT-AAAAAACATTGATTTTTTTATCGAGCTTAACGAGTTACCCGAGTAC
TTGTGAGATCGGCTCGTTTAACTTGGTATGTAAACGATCTTAAATTAAAGCTCG-GCTCGGCTCGTTATTCTTCGAGTTC
GAGTCGATTCGAGTCGAGTCACGAGCTACTCGTTTAGCTCGCGAGGTTTGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr3A_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTTGCTAAAGCTCGTTTCATTAACGAG
CTAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAAATTAGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATTAGA-CCTTACAAATACGATAAAAAGATTAACTAAGAATTTAACA
TGTGCATATGTGGCCTTGTAC--GTGTGAGTCCCCTGGGTGGCTCGGCCTTGAGCGGCTGGGCCTTGTGCTGGGACGCAA
GGTGTTTAGAGGCTGT-AT-TTT-ACTATCCCT-AAAAAACATTGATTTTTTTATCAAGCTTAACGAGTTACCCGAGTAC
TCGTGAGATCGGCTCGTTTAACTTGGTATGTAAACGATCTTAAATTAAACCTCG-GCTTGGCTCGTTATTCTTCGAGTTC
GAGTCGATTCGAGTCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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---
>chr3A_93
--------------------------------------------------------------------------------
------------TAGGGGTGGAATTCGAGCCGAGTCGAGCCAGCTCGACTCGACTTGCTAAAGCTCGTTTCATTAACGAG
ATAGCTCGACTCGACTCGTTACTATAACGAGCTCAAATCCAAGATTGGCTCGCGAGTTATATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCGTTAAAGATATGAACATTAGA-CCTTACAAATACGATAAAAAGATTAACTAAGAATTTAACA
TGTGCATATGTGGCCTTGTAC--GTGTGAGTCCCCTGGGTGGCTCGGCCTTGAGCGGCTGGGCCTTGTGCTGGGACGCAA
GGTGTTTAGAGGCTGT-AT-TTT-ACTATCCCT-AAAAAACATTGATTTTTTTATCGAGTTTAACGAGTTACCCGAGTAC
TCGTGAGATCGGCTCGTTTAACTTGGTATGTAAACGATCTTAAATTAAATCTCG-GCTCGGCTCGTTATTCTTCGAGTTC
GAGTCGATTCGAGTCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTA-----------
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>chr3B_115
TCGAGC--------------------------------------------------------------------------
---------------------------------------CCAGCTCGACTCGACTCGCTAAAGCTCGTTTCATTAATGAG
CTAGCTCGACTCGACTCATTACTATAACGAGCTCAAATCCAAGATCGGCTCGACTCG--TATAACTCGCGAGCTGGCTCG
-TTTAGCTTGTTAAGCTCATTAAAAATACGAAGATAAAA-CCTTATAAATATGACAAAAAGATTAATTAGGAAGTTAACA
TGTACATATATGGGCATGTAC--TTGAGAGTCTCCTAGGAGGCTGGGAATTGAGCGGCTCGGCCTTGTGCTGGGACGCTA
GGTGGTTATTGGCTGT-TA-TTT-ACTACCTCT-AAAAAACGTTGATTTTTTTACCGAGCCTAACGAGTTACACGAGTAG
CTCGTGACTCGGCTCGTTTAACTCGGTCAACAAACGATCTTAAACTAAAGCTTG-GCTCGACTCATTATTGTTCGAGTTC
GAGTCGATTCGAGCCGAGTCACGAGCTACTCGTTTAGCTCGCGAGCTTCGAGCTTTTTTTCCAGCCCTACACT-------
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>chr2D_760
AATACA--------------------------------------------------------------------------
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------------------------------------------------------TAACTTGCAAACGTGTTCTTCTGCAT
CGTGGAAAACGGAGAAACCATTAGCACAGTCAGCATGCAATCAGAGAGCGCCTGCAGTGCTTCCTCCTACTTGCCACAAC
GGCAGTACGGCTATATAAGAACCACCACACATGTGTAGA---AGACCCACGGCAAGCAGCTAGCTACA-------AGCGA
TCTGCACTAACCAG-------------TATTAGTACAGAGGAAGCCAGTGTGGCCATCAGAGCAACACAGAGAGGTCGAT
GACAATGAGGCCGCTCGTCCTTCTTGCCCTGGCCGCCGTACTCGCCGCCGGTACGGGCGGCGCTGAGGGAGCTGGACTGC
TGGAGAGTGCGTGAGGACCTCCGCCATGGTCCAGCAACTGGCTCTGTGCCTCCCGGCGTTGCGCAACTCGCAGTCCGCGC
CGACGAGCGGCTGCTGCGTGGGGGTGCGCAACATCGGTATGAGGAGCCCCGGTTGCGTGTGCGCCTTCTTCCAGTCCGAC
GTCTTCAAACTCGCCGGAGTGAAGCCTGAAGTCGCAATCGCAATCCCCAAGCGCTGTGGCATTGCCGACTGCGGAGGTAC
GTACGTAGTACTGCGTACGATGCGTAGGTGTATGCTAGTAG-----------TATATACGTACTTCTCAACGAGTAATAT
GTGTGCTATAAATAATGCCTACCTTTTCTTTCTTGGAGC---TGAATAGTGTTCTGAAACTGTGGGCAATATGATGCTCA
ATCCAGCTTTTTTGATTTCGCAGGTAACACGTTTCCTTGATGGCCTACTTATCAAGATTGAACGATGTGCGTGCGTGGAA
GGCTTTGTGTGGGAATAAAAA----GTCGTGCGGATAAATGGAATTGGCGGCGGATGTTA-GCCGTTGGCCTGCTCTGTT
TTCATCCTTATTCAAACTTGTAACAATGGATGTCTTTT-ATATATTACTCCTTTCCAGTTTAGAAGGT-------TTCAC
GTGTATCTCAC-GTTGACGATTT---------------------------------------------------------
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>chr2A_776
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-----------------------------------------------------------------CGTGTTCTGCATGGT
GGG--AAAACGGAGAAACCATTGGCGCTGTCAGCATGCAATCAGAGG--GCCTGCAGTGCTTCCTCCTACTTGCCACAAC
GGCAGTACAGCTATATAAGAAGCACCACACATGTGCAAAGAGAGACCCACGGCAAGCAGCTAGCTACAGCCAACAAGTGA
TCCGCACAG---------------------TAGTACAGGTGAAGACAGTGAT--CATCAGAGCAACACGGAGAGATCGAT
GACAATGAGGCCGCTCGTCCTTCTTGCCCTGGCCGTCGTGCTCGCCGCCGGTATCGGCGGCGCTGAGGGAGCTGGCGAGT
GCA-----GCGTGAGGGCCTCGGCCATGGCCCAGCAACTGGCTCCGTGCCTCCCGGCGGTGCGCAACCCGCAGTCCGCGC
CGACGAGCAGCTGCTGCGTGGGTGTGCGCAACATCAACATGAGGAGCCCCGGTTGCGTGTGCTCCGTCAT---GTCCGAC
GTCTTCAAACTGGCCGGACTGAAGCCTCAAGTCGCAATCGCAATCCCCAAGCGCTGTGGCATTGCCGACTGCGGAGGTAC
GTACCTAGTACTGCGTACGATGCGTAGGCGTATGCTAGTAG-----------TATACGTATACTTCTCAACGAGTAATAT
GTGTGCTA----------CTAGCTTTTCTTTCTTGGAGCTGATGAATAGTGTTCTGAAACTGTTGGCAATGGAGTATAAT
-----GCTTCTTTGATTTCGCAGGTAACACGTTTCCTTGATGGCCTACTTATAAAGATTGAACGACGTGCGTGCGTGGAA
GGCTTTGTGTGGGAATAAAAA----GTCCTGCGGATGAATGGAATTGGCGGCGGATGTTACGCCATTGGCCTGCTCTG-T
TTCATCCTTATTCAAACTTGTAACAATGGATGTCTTTTTATATATTACTCCTTTCCAATTTAGAAGGT-------TTCAC
ATGTACCTCAC-GTTGACGATTTAA-------------------------------------------------------
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>SNPs
S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
-------------------------------------------------------------------------S------
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---------------------------------------------------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------------S--
--S----------------------------------------------------S------------------------
----------------------------S-----S--------------------------------S------------
-----------SSSSSSSSSSSSSSSS--S---------------------S------------------S---------
---------------------------------------------S------------S---------------------
---S---------------SS-----S-----S-----------S----SS--------S--------------------
-----SS--S-----------S---------SS--------SS--------S--------------------S-SS----
-S----------SSS--------------S------S--S-S--------------------S-----------------
--S--S-SSSSS---------S-------------------SSSSSSSSSSS-----S-S--------------SS----
------------------------------------------------S----------S-------------S------
---------S-------------S------------------------S------S----S-------S-----------
-----------S---------SSSS---S----S----------------------------S-----------------
-S-----------------------------S--------------S-SS---------------SS-SSSSSSS-----
---------SSS-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_755
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---------------GGGTCGGATTGAAGATGCCA---------------------------------------------
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---
>reverse_2139
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----------------------------------------------------------TGACAACTCCAAGGCGAGTC--
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