>input_sequence_78425
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-------------------------------------ATGTGCTCCATGAGAAGCAGCGGCAGCGGCGCGGCGGTGCCGG
TAGAGAGTGTAGACCCGGAGGCGGCGTGCGCG------------------------------------------------
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------------------------------------------------------------------------------CT
GCTGGCCTCGGAGCAGTACGGGTACGTGGACGTGCGCATGTGGGAGGACTTTGACAAGGGGCACGTCGCCGGCGCACGCA
ACGTACCGTATTACCTCTCCGTCACCCCTCACGGCAAGGAGCGCAACCCTCACTTCGTCGACCAGGTCGCCGCGCTCCAC
TCCAAGGAGGACCGGTTCCTCGTCGGCTGCCGCTCCGGAGTGCGGTCAAGGCTCGCCACCGCAGACCTCGTAGCCGCCGT
AAGTACTAA-------GTGGATCCGTGACACTTTGTTGGTTGCTTGCTG-------------------------------
--------------------------------------------------------ATTTATTGATGCGTCGGCCTGCTG
GCTTACGGGTTTGATGGCGCAGGGATTCACGAATGTGAAGAACCTGGAGGGTGGCTACCTCTCCTTGCTCAAGAGCGCAA
GCTACCCGCAGCCGACGGCCAGCCACCACTGA------------------------------------------------
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----------------------------------------------------------------------------
>chr6B_1_TraesCS6B01G011300
CAGTTTTGTCCATAAACTTGGTCTAAGTTCGTTAGGTTTGACTTTTCAAAAAACATATATGCACTACATTGCAGAACGGA
GGGAGCAAAAAAAA---CTTATTTTGTGGAAATGAGACAATACTTTGATTAATAAACTATAATAATTAAGATATAAAACT
ATTTTTTAAAGTATG--AAGAGAATATTTGCAAGGCATGTGAGAAATGAAATGTCCTCCATGATTGAATTGGAT------
---------------------------------GGGATAAGCAGACAAGTAGGAGGAGCCCCCACCAAGGCAATCCTTTT
CGTGTCCTCCGTGATTGAATTGTTTTTTCCCTCCGATGGAAAGAGAGACCACGCGTTGGGTCTTTTTCGAGCAACATATC
TTATCAGCACGCTCATCAGGAGCGTACGTGGCTCACACTAGATTCAGCTGTTTTGACCATTTGCTTATTCGTGTCCCCTG
GCCGTGTCGCCGCATCTTGGTGATGGC-AATGTGGACTTGCCCTCCCTC-------------------------------
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------CCTTA---GTCTTACACCTAACAT-----------GAGCCGTCCAACCAATCAATAATAGCTGGCTAG------
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--------------------------------------------------------------AATAATGCACCTCTAGCT
TTGGCATC--ACCATACACACGCAA--GCAGATGAGCTTGAAATAATAATATACTCCCTTCATCCCAAAATAAATGTCTC
AAGCTTAGTATAGTTTTGTAA-AGGGTGCAAAAGAAGATTCTTACGTGA---TTTGTTATTT-ATTCACGGGAAATAAAT
GTAC-----AATGTATGTATAT----------------------------------------------------------
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--------------------------------------CGTCTGACATTTCGGTATATAACTAGTTCCTGCGTCGAAG-A
AGATAAGGTCTACACG-ACAGAGACGAATGAGAATTAGGCGACTTTATAGGATGAGAAAGCAATGGATGCGGCTACCCGG
GCGTGAAGGCATCAACCACTGCCTCCTCTCCT------ATAAAGAAACACCCGTTGGTAGCACTTATCTTTCCA------
--TCAA--------CCAATCCACTCCACTGCCCCCGGAGCCAAACACAACAACAAGCTTCCCTG-------TT-------
-----TTCTTCTTCTCTGCTCAAATCCTATATCCACCATGTGCTCCATGAGAAGCAGCGGCAGCGGCGCGGCGGTGCCGG
TAGAGAGTGTAGACCCGGAGGCGGCGTGCGCG------------------------------------------------
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------------------------------------------------------------------------------CT
GCTGGCCTCGGAGCAGTACGGGTACGTGGACGTGCGCATGTGGGAGGACTTTGACAAGGGGCACGTCGCCGGCGCACGCA
ACGTACCGTATTACCTCTCCGTCACCCCTCACGGCAAGGAGCGCAACCCTCACTTCGTCGACCAGGTCGCCGCGCTCCAC
TCCAAGGAGGACCGGTTCCTCGTCGGCTGCCGCTCCGGAGTGCGGTCAAGGCTCGCCACCGCAGACCTCGTAGCCGCCGT
AAGTACTAA-------GTGGATCCGTGACACTTTGTTGGTTGCTTGCTG-------------------------------
--------------------------------------------------------ATTTATTGATGCGTCGGCCTGCTG
GCTTACGGGTTTGATGGCGCAGGGATTCACGAATGTGAAGAACCTGGAGGGTGGCTACCTCTCCTTGCTCAAGAGCGCAA
GCTACCCGCAGCCGACGGCCAGCCACCACTGATCCATAAATTCCGTGTCTAGAATAAGTA---CTCCCTCCGTCCCATAA
TGTAAGACGTTTTTTGACTCTATTGTAGTGTCAAAAAACGTCTTACATTACGGGACGGAGGGAGTACTACGATGTAGTAT
TATCCAACTTC-------TTATGAAGAATAAGAGGAAGAAGCGTGTTCAGAGCTGAGGAGGAATTAATTTCCAAGGAAAA
AGAAGGCACTATGTATGTATATGCACTTATGCATCCTGAGTTCTTGGCATGGACTATGTTCCAACCAATAGTGCTACTAG
CTGAATACTGATTTTCCCTTTTATGAATGTATCTTGCAAAAAGAAACCAAAGCAAATGTTTTATTCTTCAGGTCTGGAAA
ATGTCAACTACGTAACGTCCTAAATAATTTTACGGGTTAATAGTGCATATGAAGTTGACAAAGTGATCATGTGCTACCGA
TGTTAGTTAATTACAGAATGTGTATGGCACAGCATGCATTTACAAGTAGTATATGTGGGGTAAGAGCAAGATGCGGACAA
GTGGTCCAGATCGCCATGATGATGCGGCGCCACACACGGGCCTGACCAGCTTGTTAGAGATATATTTGGGTTACATATGT
TTGGTAGTCTAGGATTTGTAATCCGTTTTCTACCTTATCTCAAGGAGAGGCGTCTTGCCCTCCAAACCAAGTATTCAATA
TATATTCGGCCTCGAGGCTCAATAATACATCCATCATATTCCGCAACAACTATTCCACCAAATCCCTCTCTCCCTTCTAA
CATGGTCGTGGTA-------------------------------------------------------------------
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----------------------------------------------GAGCGCCTCTACTCCGACCCCGGCGCGACCAGCC
GGCCTCTCCTCCGACCAGC----------CGCCGTCCGCGCGTCGGTCCGCCCCTCGCCCTG------------------
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----------------------CGCCGGCCGTCACCGCCCTGCTCCGACCGGGACACCTGCATCGCCCCGACCCGGCAGC
CTCGCGCCATGCGACGGCCAATCATAGCCGTCGCTCGCGCGCACGGCGGC------------------------------
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---------------------------------------------------------------CCGGCGGTCTACCTCGC
CGGCCTCGTCCTCGGCTG--------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6D_2
AGTGTTGTT-CATAAACTTGCTCAAAGTTCGTTAGGTTTGACTTTTCAAAAATC-TATATGCATTACATTATGGAACAAA
GAGAGTATATAAAATATCTTATTTTGTGGAACTAAGACAATACTTTGATTAATAAACTACAATAATTAAGATATAATGCT
ATTTTTTAAAGGACATCAATAGAACATGTGCAAGGCATGTAAGGAATGAAATGTCCA------------TGGATAGGATA
AGCAGACAAGTCCCCGCCAAAAAAAGAAAGAAAGGGATAAGCAGACAAGTAGGAGGAGCCCC-ACCGAGGCTATCCTTTT
CATGTGCTGCATGATTGAATTGTTATCTCCCTCCGATGGAAAGAGAGACTACGCGTTGGGTCCTTTTCGAGCAACATATC
TTTTTACCTCGCTCATCGGGAGCGTACGTGGCACATACAAGATTCAACTGGTCTGACCATTTGGTTATTTA---------
----TGTCGCCGCATCTTCATCATGGC-AATGTGGACTTGTCCTCGACTACACACAACGGGAGTAACATAAATCGTAACA
TCATATATATCTAGGAAAAATAGATTGTGTGGCAAGTAATTAATAAAAAAAGAGAGTCATGTGTTAACATAGTTAGTTAC
TAATAGCATGAGTAACATCACACATATCAAGGGAAGATGAGTCTACAACCTAATAAATGAAATGTTGCACGACATCGCAT
ATATGTTACTCCCCACTATAAAGATGGTAACATAAACTAGTAATATATGTATGTTACTAGTCCAAGTTACTCCCCACTGT
GCCTAGTCTTA---GTCTT--ACCTAACAT-----------GAGCCGTCCAACCAATCAATAATAGCTGGCTAG------
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--------------------------------------------------------------AATAATGCACCTCAGGTT
TTGGCATCAAACCATACACACGCAA--GCACATGAGATTGAAATATAAGAATAAGA------------------------
---------------------GATGGTGTAAAAGGAGATTATTACATGA---TATGCTATTAAATTCACATGAAATAAAT
ATTA-----CAAGTATGTATAT----------------------------------------------------------
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--------------------------------------CGTCTGACATTTCCATATATAACT--CTCCTTGGTCGCAG-A
AGATAAGGTCGACACAGACCGAGACGATTGAGAATTAGGAGACTTTATACGATGAGAAAGTGATGGATGCGGCTACCCGG
GCGTGAAGGCATCAACCACTGCCTCCTCTCCT------ATAAATAAACACCCGTTGGTAGCACTTATCTTCCCATCAAGG
CATCAA--------CCAATCCACTCCACAGCCCCCGGAGCCAGACACACCAACAAGCTTCCCTG-------TCTTCA---
TCTTCTTCTTCTTCCCTGCTCAAATCTTCCATACACCATGGGCTCCCTGAGAAGCAGTGGCAGCGGCGCGGCGGTGCCGG
TAGAGAGTGTTGACCCTGAGGCGGCGTGCGCA------------------------------------------------
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------------------------------------------------------------------------------CT
GCTGGCCTCGGGGCAGTACGGGTACGTGGACGTGCGCATGTGGGAGGACTTCGACAAGGGCCATGTCGCCGGCGCACGCA
ACGTACCATACTACCTCTCCGTCACCCCTCACGGTAAGGAGCACAACCCTCACTTCGTCGACCAGGTCGCCGCGCTCCAC
GCCAAGGAGGACCAGTTCCTCGTTGGCTGCCGCTCCGGAATCCGGTCAAGGCTTGCCACTGCAGACCTCGTCGCCGCGGT
AAGTACTAACTACTAAGTGGTTTCACGACACTTTGTTGGTTGCTTGTTT-------------------------------
--------------------------------------------------------ATTGATTGATTCATCGACCTGCTG
GCTTACGGGTTTGATGGCGCAGGGATTCACGAGTGTGAAGAACCTGGAGGGTGGCTACCTCTCCTTGCTCAAGAGCGCAA
GCTACCCGCAGCCGACAGCCAGCCACCACTGATCCACCAATTCCGTATCTTGAATAAGTA---CT---------------
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----------------------------------------------------------------------------
>chr6D_89
ATTGA---------------------------------------------------------------------------
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------------------ATTGTTTGCTCCCTCCGAAGGAAAGATAAACCACGCGTTGGGTCGTTTTCGGGCAACATATC
TTATCAGCTCGCTTATCGGGAGCGTACGTGGCGCACATTAGATTCAGCTGGTCTGACCATTTGGTTATTTGTTTCGCCTG
GCCGTGTCGCCGCATCTTCATGATGGC-AATGTGGACTTGTCCTCCCTC-------------------------------
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------TCTTA---GTCTT--ACCTAACAT-----------GAGCCGTCCAACCATTCAATAATTGCTGGCTAG------
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--------------------------------------------------------------AATAATGCACCTCTAGTT
TTGGCATC--ACCATACACACGCAA--GCACATGAACTTGAAATAAT---------------------AATAAATGTCTC
AAGCTTAGTATAATTTTGTACGAGGGTGTAAAAGAAGATTCTTACGTGA---TTTATTATTT-ATTCACAGGAAATAAAT
GTACTATACAATGTATGTATAA----------------------------------------------------------
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--------------------------------------CGTCTGACATTTCCGTATATAACTTGCTCCTGGGTCGAAG-A
AGATAAGGTCGACACAGACCGAGACGAATGAGAATTAGGAGACTTTATACGATGAGAAAGTGATGGATGCGGCTACCCGG
GCGTGAAGGCATCAACCACTGCCTCCTCTCCT------ATAAATAAACACCCGTTGGTAGCACTTATCTTCCCA------
--TCAA--------CCAATCCAATCCACAGCCCCCGGAGCCAGACACACCAACAAGCTTCCCTG-------TCTTCA---
TCTTCTTCTTCTTCCCTGCTCAAATCTTCCATACACCATGGGCTCCCTGAGAAGCAGTGGCAGCGGCGCGGCGGTGCCGG
TGGAGAGTGTGGACCCAGAGGCGGCGTGCGTGCTGCTGGCCACGCAGCAGTACGGGTACGTGGACGTGCGCATGTGGGAG
GACTTCGACAAGGGGCACGTCGCGGGTGCACGCAACGTACCGTATTACCTCTCCGTCACCCCTCACGGCAAGGAGCGCAA
CCCTCACTTCGTCGACCAGGTCGCCGCACTCCACGCCAAGGAGGACAGGTTCCTCGTTGGCTGCCGCTCTGGTGTCCGTT
CAAGGCTCGCCACCGCGGACCTCTTGGCCGCAGTAAGTACTAAGTAGTTCCGCGGCACTTCGTTGGTTGCTTGCTGTTTA
TTGATTCGTCGACCTGCTGACCTACCGATTTGATGGTGCAGGGGTTTACCAATGTGAAGAACCTTCAGGGCGGCTACCTC
TCCTTGCTCAAGAGCGCAAGCTACTCGCAGCCAACAGCCAGCCACCAGTGATCCATCAATTCCATATCTAGAATAAGAAG
CGTGTTCAGAGCTCCCTGTGGAGGGGACGCGTCGAGCGGACACTACAAAGGCGGTAACCACGACGGTTGCTAAACTAAGC
AGAGATTATTAGGATCACAGTTAATCCTTAACACCCCTAATCTATGCTTGTCTTTGTGAATGCTCCATTATCTTGATAAA
GACTCCTCCAGACATGTTTATCATTAAGTATGTTCAGCATCTTCAACTTGAGAATGTCTCATCGAAAAACCCTGTGGGAA
AATATGAGGAGATAGGCCCCCGCGAATGAATGCGAGTGGGAGCAGTTTGCAATAGCATCAAAGTTTGCAATAACACAGGA
CAAAATAACTGCGAGGTTGACCTTAGAAACCCTCAGACCCACCTTTCATCTATGAAACTGGCCGATCAGACTGTCCACGA
CACGCTAATGGCCACGTAGGGCCACAAATCCCTCGTCGCCCCGCAAGAATCGCATGGACGGCAACAGCCAGTGCCAAACG
CGGCCGCCAGATGCGCATCGGATGACAAGCTATGAGTTTGGATTTGTTCCGATATTTGGAATGCTCACGAGTTAACAATT
TCATTTAATAATACAAGGGCAGCCAAAATTATCGAAGTCAAAAATATTTTCCATATATTTTCTGAGATAAATTATAGAAA
AAAGATCACGTTCGACAATCCAAAACTGGAATTGCTTCCAGAATTTGGTTGCACGTCCAAAAATCTTCTTATGTGGAACT
AAGACAATACTTTGATTAATAAACTAATAAGTAAGTTATAAATCCATTTTTAAAGGCCATCAAGAGAATA----------
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------------------------------------------------------TGTGCAAGGCATGGGAGGAATGGAAT
GTCCATGGATAGGATAAGTAGACAAGTAGGAGAAG---CCCCCACCGAGGCAATCCTTTTCATGTCCTCCATGATTGAAT
TGTTTGCTCCCTCCGATGGAAAGAGAAACCACGCGTTGGGTTGTTTCAGGCAACATATCTTATCAGCTCGCTTATCGGGA
GCGTAGGTGGCGCACACTAGATTCAACTTTGGTTATTCGTGTCCCCTG-------------------GCCGTGTCGCCGC
ATCTTCATCATGGTAAAGTGGACTTGTCCTCCCTCTCTTAGTCTTACCAGTCTTACCTAACAATAACATGATCTGGCCAA
CCAATCAATAATAGCTCGCCACAATAATGCACCCCGAGCTTTGGCATCACCATTCACACGCAAGCACACATGAGCTTCAA
TTAATAATAAGAGGGTGCAAAAGGAGATTCTTACTACAAGTAGGGATGAAAATGGAGTGGAAAGCTTCCGCTTTTCCGGA
GGAAAAATGTAAACGGAGAGGAAATATCAAAACGGAAATGGAAATTTGCAAAATGGAAATGGAAGTGGAATTTTTTATGC
GGAAACGGAAACAAAAACGGAACGGTGTTTTCCGGTGGAACAGACATGGAAACGGAACTTTCCGTTTCTGTGAATATGAA
ATTTCCGTTTCTACTGTAGGCCCATGGCTGCTTTGTAGCCCAATTACCAAGCAACACACAATGACACAATGAGCAGACTG
GATCATTTGAGGACCAACTTTTACTTCCACACACGTTCTCAACTAGACACAATACGGAATTGTCATGTACTATTAAAATA
CTACCCCATGTTGCCAACACAACCATATTATCATGTAGCCATATTAACAATTTCTTAAATTTCTTTGTTTTTTGTGTGTA
TTTCTCTATGATTCAAGGGGGTTTTAAGTTCCGGTCAACACACCGTTTTGTTTCCGCGTCCGTTCTGTATTCGCTCCGTG
TCTGTTTCCGGTAGTATTTGTTTCCGTATTCATTTCCGGAGTTTCCGTATTTGTTTTCGCTTCTGCAAAAAAATATGAAA
ACAAATGTGGTAGCACCCAGTTCCGTCCGTTTCCGCTCCGTTTTCATCCCTAACTACAAGTTTTGTTATTTAATTCACGG
CAAATAGATATAGTATGTATGTATATCCCGAGCTCACATGAGCTCGGACAAACAGTAATTTAAAAAAAAAATCTAAACAT
TCCGAATTTTTTTGTCTGAAGCTTTGACAAATGTTTCCATAGCTTGGAAAATTTTATCACCAGATGACGTTTATTTAAAA
TGTGGCAAAAGAAAGTTGATGCTCGAAAATGTGTTTGAAAATAACGTTTTAGAGCATCAATTTTTTTTTGAAAGTTAAAC
AAACTTTTGTCAAAGTTTCACACAAAAAAATTTGGAATTTCCTAATTTTTTTGAATTCCTTTTAATTTTATTGTTCGCCC
GAGCTCATGTGAGCTCGGGATCAGAACAACTGCGTCCATCTGACATTTCCATATATAACTTGCTCCTGCATCGAAACAAG
ATAGGATCGACACAGCGGAGACGAATGAGAATGAGGCGACTTTATACGGTGAGAAAGTGATGGATGCGGCTACCCGGACG
TGAAGGCATCAACCGCTGCC---------TCCTCTCCTATAAATAAACACCCT-GGTAGCGCCTATGTTTCCATCAAGGC
ATCAACCAATCCACTCCACAGCCCCCGGAGCCAAACACACCAACAAGCCCCCTTGTTTTCTTCTTCCCTGCTCAAATCGT
CCATACACCATGTGCTCCCTCAGAAGCAGCGGCACCGGCATGCCGGTACAGAGTGTGGACCCGGAGGCGGCATGCGCACT
GCTGGCCTCGGAGCAGTACGGGTACGTGGACGTGCGCATGTGGGAGGACTTCGACAAGGGCCATGTTGCCGGCGCACGCA
ACGTACCATACTACCTCTCTGTCACCCCTCACGGCAAGGAGCGCAACCCTCACTTCGTCGACCAGGTCGCCGTGCTCCAC
TCCAAGGAGGACCGGTTCCTCGTCGGTTGCCGCTCCGGGGTGCCGTCAAGGCTCGCCACCGCAGAACTCGTGGCCGCGGT
AAGTACTAA-------GGAG-------------TGTTGGTTTCTTGCGGATTAGTCCCTCCGCCCCACAATATATGATCA
TTTTTTAAGCTAACATAGGTTGAAAAACAATCTTATATTATGGGATGGACAGAGTAATTTATTGATTCGTCGACCTGCTG
TTGAT-CGGTTTGATGATGCAGGGGTTTACGAATGTGAAGAATCTCGAGGGCGGCTACCTCTCCTTGCTCAAGAGCGCAA
GCTACCCTGACAACT-----AGCCACCACTGGTTCTTCAGTTCCATATCTAGAATAAATACT------------------
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>chr6A_89
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--------AAAAAA---CTTCTTTTGTGGAACTAAGACAATACTTTTTTTAATAAAC--CAATAATTAAGTTATAAATCT
ATTTTTTAGAGGACATCAAGAGAATATGTGCAAGGCATGGGAGGACTGAAATGTCCA------------TGGAT------
---------------------------------AGGATAAGCAGACAAGTAGGAGGAGCCCCCACCGAGGCAATCCTTTT
CATGTCCTCCATGATTGAATTGTTTGCTTCTTCCGATGGAAAGAGAAACCACACGTTGGGTCGTTTTCAGGCAACATATC
TTATCAGCTCGCTTATCGGGAGCGTACGTGGCGCACACTAGATTCAAC-----------TTTGGTTATTCGTGTCCCCTG
GCCGTGTCGCCGCATCTTCATCATGGTAAAGGTGGACTTGTCTTCCCTC-------------------------------
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------TCTTACCAGTCTT--ACCTAACAATAACGCACCTCGAGCTGGCCAACCAATCAATAATAGCTGGCTAGCAAATC
AACCTGTGGTTGAGTTGGTTAGGTGGACAGTGATATCTCCAATTCATCAGGGTTCAAATCCTGGTGCTCACATTATTCTT
GGATTTATTTCAGAATTTCCGGCGATGCGCTTTCAGTGGGAGGAGACGTTTCCGTCGACGACGAGGCGCCTACGGTAACT
TCGTAAATCTCAAGATGATATGCCGGCTCAGTCTCTCGGAGGTGCTCATAGGGGATAGGGTGTGCGTGTGTGCGTTCATA
AGGGTGAGTGTATGCGCGTGTATATGAGCGCTTGTGTCTGTACTGATGCTATAGCTGGCTAGAATAATGCACCTCGAGCT
TTGGCATC--ACCATTCACACGCAAGCGCAGATGAGCTTCAATTAATAATA----A------------------------
---------------------GAGGGTGCAAAAGGAGATTGTTACTACAAGTTTTGTTATTTAATTCACAGGAAATAAAT
ATAG-----TATGTATGTATATCCCGAGCTCACATGAGCTCGGACCAATAGTAAAAAATAAAAAAAATCTGATTTTTTTT
GTCTGAAACTTTGACAAATATTTCCATAGCTTGCAAAATTTTATCACATGAAATAAATATAGTATGTATGTATATCCCGA
GCTCACATGAGCTGGGACGAACAGTAAAAAATTTAAAATTTAAAAAAATCCTAATTTTTTTTTGCTGAAACTTTGAGAAA
TGTTTCCAATAGCTTGCAAAATATTTCCATAACATTTTGGATCATCGATTTTGTTTTTTACGACATTTTCCACGAGTGTC
ATATGATGATGGAATTTTGAAAGCTATATAACTTTTGTCATAGTTTCACCCAATTTTTTTTGGAATTATTTGAATTCTTT
TTTATTTTATTTGAGCTCGGGATCAGGACAGCTGCGTCCGTCTGACATTTCCATATATAACTTGCTCATGCATTGAAACA
AGATAGGATCGACACA-GCGGAGACGAATGGGAACGAGGCGACTTTATACGATGAGAAAGTGATGGATGCGGCTACCCGG
ACGTGAAGGCATCAACCGCTGCCTCCTCTCCT------ATAAATAAACACCTGTTGGCAGCACCTATCTTTCCA------
--TCAAGGCATCACCCAATCCGCTCCACAGCCCCCGGAGCCAAACACATCAACACGCCCCCCTG----------------
---TCTTCTTCTTCCCTGCTCAAATCCTCCATACACCATGGGCTCCCTGAGAAGCAGCGGCAGCGGCGCGGCAGTGCCCG
TAGAGAGTGTTGACCCCGAGGCGGCTTGCGCA------------------------------------------------
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------------------------------------------------------------------------------CT
GCTGGCCTCGGGGCAGTACGGGTACGTGGACGTGCGCATGTGGGAGGACTTCGACAAGGGCCATGTCGCCGGCGCGCGCA
ACGTACCATACTACCTCTCCGTCACCCCTCACGGCAAGGAGCACAACCCTCACTTCGTCGACCAGGTCGCCGCGCTCCAC
GCCAAGGAGGACCGGTTCCTCGTTGGCTGCCGCTCCGGGATCCGGTCAAGGCTCGCCACCGCAGACCTCGTCGCCGCCGT
AAGTACTAA-------GTGGATCCGTGACACTTTGTTGGTTACCTTCTG-------------------------------
--------------------------------------------------------ATTTATTGATTCGTCGACCTGCTG
GCTTACCGGTTTGATGGCGCAGGGATTCACGAATGTGAAGAACCTGGAGGGTGGCTACCTCTCCTTGCTCAAGAGCGCAA
GCTACCCGCAGCCGGCAGCCAGCCACCACTGATCCATCAATTCCGTATCTAGAATAAGTACTACTCTCTCTGTAAACTAA
TATAAAAGTGTTTAGAACACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACT---ATGTAGTAT
TATCCAACATCCTATGAGTTATGAAGAATAAGAGGAAGAAGCGTGTTCAGAACTGAGG---AATTAATTTCCATGGAAAA
AGAAGGCACTATGCATGTATA--------TGCATCCTGAGTTTTTGGCATGGACTTTGTTCCAACCAAAAGTGCTACTAG
CTGAATACTGATTTCCCCTTTTATGATTGTAGCTTGC-AAAAGGAACCTAAGAAAATGTATTATTCTTCAGGTC------
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>chr6D_314
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-------------------------------------GGAAAGAGAAACCACGCGTTGGGTCATTTTCGACCAACATATC
CTTTCATCTTGCTTATCGGGAGCGTACGTGGCGCACACTAGATTCAGCTAGTCTGACAATTTGGTTATTCGTGTCCCCTG
GCCGTGTCGCCACATCTTCATCATGGC-AATGTGGACTTGTCCTCCCTC-------------------------------
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------TCT-------CTT--ACCTAATAT-----------GAGCCGTCCAACCAATCAATAATAGCTGGCTAG------
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--------------------------------------------------------------AATAATGCACCTCGAGCT
TTGGCATC--ACCATACACACGCAA--GCACATGATCTTGAAATTAT---------------------AAT---------
-----------------GTACGAGGGTGCAAAAGGAGATTATTACCTGA---TTTGTGATTTAATTCACGGGAAATAAAT
GTAG-----TAGGTATGTATAT----------------------------------------------------------
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--------------------------------------AGTCTGACATTTCCATATACGACTTGCTCCTCCGTCGAAG-A
AGATAAGGTCGACACC-ACGGAGACGAATAAGAATTAGGTGACTTTGTACGACGAGAAAGTGATGGATGCGGCTACCCGG
GTGTGAAGGCATCATCCACTGCCTCCTCTCCAATATAAATAAATAAACACCCGTTGGTAGCACTTATCTTTCCA------
--TCAA--------CCAATCCACTCCAGAGCCCCCGGAGCCAAACACACCAACAAGCTTCCCTG----------------
---TCTTCTTCTTCTCTGCTCAAATCCTCCATACACCATGGGCTCCATGAGAAGCAGCGGCAGCGGCGCGGCGGTGCCGG
TAGAGAGTGTGGATCCG---------------------------------------------------------------
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>chr6D_802
AGGTG---------------------------------------------------------------------------
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------------------------------------------------------AGAAAGCGATGGATGCGGCTACCCGG
CCATGAGAAGCGTCGACCATT----CTCTCTC------TATAAATAAGACACGTAGGTAACACTTATCTTTC--------
-----A--------CCAATCCAGTCCATAGCCCCCGGAGCCAGACCCACCCTGCATACCTCCCCTTCATCATCATCACCA
TCTTCTTCTTCTTCTCCTCGCACA---TCCATCATCCATGGGCTCCCTGGGAAGCAGCGACGGAGAGAAGCGACTGCCGG
TGGAGAGCGTGAACACGGAGGCGGCATGCGCACTGCTGGCGTCGGAGCAATACGGGTACGTGGACGTGCGCATGTGGGAG
GACTTCGACCGCGGCCATGTCGCCGGCGCGCGCAACGTGCCCTACTACCTTTCCGTCAACCCCCACGGCAAGGAGCGCAA
CCTGGACTTCGTGGACCAGGTCGCCGCGCTCCACTCGACACATGACCGGCTTATCGTTGGCTGCCGCTCCGGGGTGCGAT
CCAGGCTCGCCACCGCCGACCTCGTTGCCGCCGTAAGTAGTAGTTCTGCGACCGATTGGTCGAACTTACTTACTTATTGA
TGTGTGGATCGATTTACTGATTTGTTGGTCT----GTGCAGGGGTTCACGAAGGTGAAGAACCTGGAGGGTGGCTACCTC
TCCTTGCTCAAGAGCGTCAGTTACAAGCAGCAGGCAGCACTAGCCAACCTTCACTAGTTTTCCTTTTGTTTCTAAGGCTC
TCAGGAATAAGTTAATTGGTGATCTATCGTTGATGATGTACAGAGTAAATTTCCAAGGAAAAGAAGGCATTTTGTACGTA
TTAAAACCATATATGAATCTTCGACTTGGATTTGGTCTTCTTCGAG----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AATGTATGGACAAGCAAGGGA
GAAAATAATGGCAGGCACAGTTGGTTACTTAGGGATTTGGTTGACTAAGCTGAGTATTTCTCTACCTGTTCTGTCCTTTC
ATACAGCTGATCAAGTTGAAAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAATGCATTTTTAAACTAGAGAAATTGAGGCATTAACTTTT
TATTTTCATCGAACACAACTAATACAAAATGAGTTACCAGTTGTGTGATTAGGTCCTCTTTATGCTGAAAATACAACAAT
ATTTGAGCTAAATTTGTGAATTAATACAAATGGAATATAAATAAGTATAAAATTTGGTATAAACAGGCTCACAGGCTGGT
TGTCCCAACAGCATCGCAACCAAGATCCAGACTATCAATGTCATTGTTGTGGCTGAGGGCCCAGACGGTATTTTGTCCAT
GGTCCTCGCGATAATGGAAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGATAAACCGAATTGCAAAGC
ATAGGCTCGGATGGCGAGGCACCACTGGCATAACCAGTCAACTCTTATGGACCAAGCCATAAGAGGGTAACTCTTATGGG
CCAACCAGTAGCATGACTTGCCTGCTCTTTTTTTTGTTTTGAAAATGGATACTAATGATTTGTATTTTAGTGAAAGAGTC
CTAGATCGATTATAAAAGTTCACCAGAAATACAATGCACCTGAAATATAATAGAAATTACATCATGGTCCCTAGACGACC
CAAACAACGCCTACCACTGGGAGAGACGTCGACACGCTGCTGCCGCCGCTTCCCTAATAGAGCCAGCCTTACCCACTGAT
GACAGCCGAGAAGTCTTCATGCACGTGCCCCTAAAAACCAGTCCCCCTAGAGACACAGTCGTCGTCATTGAACCATTGAA
CTGGTCTCAAGCATCTATCACCAGATCTCGCCATCACGCACGCACGACGAGAGTCCTAACCTCGCCACCCCAAGGATACA
ACATAATCCATGTCGGAGCTCCGTCGACTCTGTCTAAACGAACTATATTAGAAGGACCGGAGCATGGAAGAGCATCTCGA
AGAAAAAGGGCCGCCCATGCAAGGAATAAAGAACTCTAATCTAACCTACTAGTTGGAGCTGAGGAACTATAATAAAAAAC
ATAGCTAATAAAATGGAAAACGAAAATGTTCACATACCCTAGTAGAAATGTTCACTTGTATAACAAAATTATTCATCATG
GATAGAAAACAAATATTTTGGTACTAAAAGTGTCCATGTGTTTGAAAAAAAAAATCATGGTTTGAGAAATGTTGTCCGAA
TATGCATGAATATATGCTCATAAACATTTAATAAAATGTTGCTCGTTGCATTTTGTGTGTGTATTATACTCCCATGATTT
GATGGATAAAGGTATATATTGGATATTCTTTTTGTCAATAGATATATATTGGATATTTACACATTCATGGAAATAAAGTT
GGCAACCAAAGCGTTCGAAAAATATACTTTGGAAAAAAGGAGATATGTACCGTCTGTGCAAGGCATGGTGAAATAA-AAT
AGCCATGAATAGGATAAGGGGACAAGGAGGAGGAGGAACCCCCACCGATGCAATCCTTTTCATCCCCTCCATGATTGAAT
TGTTTGCTCCCTCCGATGGAAAGGAACCGTTGTGTCGTTGTTGATCAACAGGATCCTTTCCCTCCACC----TATCAGTG
GAGTACGTGGAGCACACTAGACAAGGAGATAATTCAACTGATCTGAGCATTTCTTTATTATCGCTCTGCCGTGTCGCCGC
GTCATCATGGAAATCAGGACCACTTGTCCTCTTCTTTACCAAACATATATACATATTCTTGCATCTGTAGACAACTGCCA
GATCATGGCTGGCTAGCTATAATTTCGTATCAACAATACCCATGAACATGACCTCTTGCCACAAAACCCTTAA-------
-----AAAAATAGGGTGCAAAAGGAGATTCTTATACACCA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGTCATTTCATAGAAAA
CAAATACAGCAACTACGTGTGTAGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGACATTTCCATATATGTAACTTATGTAAGGTT-------
----------------------------------GGCGACTTTAGACGATCATGAAGTGATGGATGCGGCTACCCGGGTG
TGATATGTTCGACCGCTGCCATGGCATCATCTTCTCCTATAAATAACACCAGTAGGTAGCGCCTATCCTTCCATCAC---
-----CCAATCCACTCCACAGCCTCTGGAGACCACCTCACACAGAAACAGAGGCCCCTTCTTCCTAGCTGCTCAATCCTC
CATAG----ATGGGCTCCCTGCGAAGCAGCACGAGCGCGG---CGGTGGAGAGCGTGGACGCCGAGGCGGCGTGCGGGCT
GCTGGCCTCGGAGCAGTACGGGTACGTGGACGTGCGGATGTGGGAGGACTTCGAAAAGGGCCACGTTGCCGGTGCACGAA
ACGTGCCCTACTACCTCTCTGTCACGCCCCATGGCAAGGAGCGCAACCCGGACTTCGTCGACCAGGTTGCGGCGCTCCAC
TCCAAGGAGGACCGGTTCCTTGTTGGCTGCCGCTCTGGGGTCCGGTCCAGGCTCGCCACCGCAGACCTCGCCGCCGCTGT
AAGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr6A_817
--------------------------------------------------------------------------------
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----------------------------------------------------TGAGAAAGTGATGGATGCGGCTACCCGG
CCATGAGAAACATCGACCATT----CTCTCTC------TATAAATAAGACACGTAGGTAACACTCATCTTTC--------
-----A--------CCAATCCACTCCACAGCCCCCGGAACCAGACCCACCCTGCATACCTCCCCTCCTTCATCATCA---
TCTTCTTCTTCTTCTCCTCGCACA---TCCATCGTCCATGGGCTCCCTGGGAAGCAGCGACGTCGAGAAGAGACTGGCGG
TGGAGAGCGTGAACACGGAGGCGGCATGCGCACTGCTGGCGTCG------------------------------------
--------------------------------------------------------------------------------
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-------TCGGAGCAATACGGGTACGTGGACGTGCGCATGTGGGAGGACTTCGACCGGGGCCATGTCGCCGGTGCGCGCA
ACGTGCCCTACTACCTCTCCGTCAACCCCCACGGCAAGGAGCGCAACCTGGACTTCGTGGACCAGGTCGCCGCGCTCCAC
TCTAAACAGGACCGGCTCCTCGTCGGCTGCCGCTCCGGGGTGCGGTCCAGGCTCGCCACCGCCGACCTCGTCGCCGCCGT
AAGTTGTAGTCTTGCGACTGATTGGTTGAACTCA------------CTG-------------------------------
--------------------------------------------------------ACTTATGGATGTGTGGATCGATTT
ACTGATTGGTTGGTCTGTGCAGGGGTTCACGAAGGTGAAGAACCTGGAGGGTGGCTACCTCTCCTTGCTCAAGAGCGTCA
GTTACCCGCAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6D_2056
TGACCAGTC-----------------------------------------------------------------------
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-----------------------------------------------------TTAGAGATATATTTGGGTTACATATGT
TTGGTAGTTTAGGATTTGTAATTCGTCTCCTACCTTATCTCTAAGAGAGGCGTCTTGCGCTCCAAGCCATGTATTCAATA
TATACTCACCCTCAAGACTCAATAATACATCTATCATATTCCACAACAACTATTTCACCAAATCCCTCTCTACCTTCTAA
CATGGTATCTATCGCAAGTCGATCCTAAACCCTAGCCGCCGCCGCTTCCGCACTTGCGCGCCGCCCCCGGGGCGGTAGGC
CTCCATGACCGCCGCAGGGGCCGCGCCGCCCGTACCTAGGGTTCGTCCGCCGGCCGTGTTGGCCGGCTGCCCTAGAGAGT
CTTTTTCCCGAGCCCTCGTTTCGGATTTTTTTTCACTTTCTTGCCGGTCGTTTTGATAGGCGTTTTCTTTTTGGTTTCTG
ATCTATACTTGATCGGTTTGCATCGCCCACCGTCGCCGTCGACCCCGAGCGCCTCTACTCCAACACCGGCGCGATCAGCC
GGCTTCTTCATCGACCCGGCGACCACGTGCGTCGTCCGCGCGTCTGCCCGCCGGTCGCCCTGACCCGGCGGCCTCGCGCG
TCGTCCGCGCGTCTGCCAGCCGATCGCCCCAACCCGGCGGCCTCGCGTCATGCGGCGGCCCTTCACCGCCGCCGTTCGCG
CGCCGGCCCGTCCGTCGATCTACGCCGGCCGTCACCGCCCTGCTCCGACCGGGACTCCTGCATCACCCCGACCCGGCGGC
CTCGCACCATGTGGCGGCCAATCATAGCCGCCCTGCCGCCCGCTGTCGCCGGCTTCATCTCGGACTCCGCCGCCACCCCG
CCTCCATCGAGCGGCATCCCCGACCTCGTGTGTGATCCGATTGATCACCCGCCCGCCGCCGCAATCTGCCTCAGCTACGC
AATGCGACCGACCTGGCCCGTCGGTTGCACGCGCCTTCGCAGGCCCCGTGAAGATCGTCCCCGAGTTCAGCGCGCCTCTC
CACCGATCGAGCATCGGGCTGCCGCTGTGTCGCCCCGTCGGGCCGCAGCGCCGCCGCCCCGTGGTTCTTCTCCCGGCTGC
ACCGACCCGCGTCACCGCTGCGTCGCCCCTTCGGGCCGTAGTGTCGCAGCCCGCGGTCCACCGCCGCCCCGAGGCCGTCC
GCTCCAGGTCGTCCCCGTGGCAGCTCCGACCCTCGCGCCGCCGCTGCGTCGCCCCGTCGGGCCGTAGCGAGCATGGCACG
CGGTCCCGAGGCCGTCCCCGCGGCTGCACCGACTCGCGAACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGGCCACCGCGTCGCGGCCCGCGGTCCCCGCCGTCGCCCCGACCCGCCTGCCGCCGCTGCGTC
GCCCCTTCAGGCCGTAGCGCCGCGGCCCACGGTCCACTCCGCCGTCCCCGCGCGTCGACCTCCCGTGGTATGCGCCGCGC
CGTCTCCCTTGGCGCGGGAATGCCACCGTCCGCGCCGGTCTTCGTGACGCTGTCAGGGTTCTTCGCCTACTTCGAGCACC
GCCGCCGTCGTCAGGGCTGCCGCCGCCGCTCTTCTTCGGCCGCCGCCGCTACCCCCGTAGCCGCCGCCCGTCCACCCCTT
CGTCTTCGTCCAAGCACCAACATGTCGCCGGCGTCGCCGTCATCTATCCCGAACACTTCGTCTACTCAGACAACCACGGG
CGACATCGACCCCGCGTCGATGGACGCCGCAACGTCGTTGAGTCCTTCTCTGCTGGCCTCTCCGACTCCTCGACATGGCA
TACAGCTCGTGCAGGTCCCTCGTCTACGCATGCCGGTGCTGGCAACACCGACGCGTGCCTTCCTCCACGACATGTCCCCG
GGCCTGGCAAGCCTGGAGCGGCGCTTCGTCAACTTGCTCTTTGTCCGTCTACGCATGCCCGGTGCTGGCAACACCGATGC
GTGCCTTCGTCCACGACGTGTCCCCGGGATTGGCAAACCTGGCGCGACGCTTCGTCAACACCGTCTACCTCTCGGCGCAC
CCTTACTTCGACATCATTGCGCCCATGCTAACTCGGCGCCTCCTAGCGCCTGCGGCTCCAAGGCATTTTCCTCGACACCG
GCTACCCCGACTCGACATCGACCACGGCATTCTTCGCACGGCTACCTCAACCATGCCTACACCACCCTACGCTCTCGGCT
ACCTCGACATCGGCACAAAGGGTTATCATCCGCTTGAGCAACTCGTCGGCTTCCTCTACAGTCAACGCGTCCGCGACGCG
ACACCATCCACGACGCTCCCGCTAGGACTGCGGGGGGATGTCAGTCCGTCGGCTGCTATTTTCTGCAGTCTGACCGTCCG
CGTCGCTCCTGTTGTTCGCCACGCTACCGCTACGACTGCGGGGGATGTTAGAGATATATTTGGGTTACATATGTTTGGTA
GTCTAGGATTTGTAATCCGTCTCCTACCTTATCTCTAGGAGAGGCATGTTACCCTCCAAGCCATGTACTCAATATATACT
CACCCTCGAGGCTCAATAATACATCCATCATATTCCGCAACAACTATTCCACCAAATCCCTCTCTCCCTTCTAACA
>SNPs
SS----SS-S----------S--S----------------------------S-S--------S------SSS----SS-
-S---S-S-----------------------S-S-------------------------S-----------------S--
-----------S-SS------------S---------------S------------SSSSSSSSSSSSS-----------
------------------------------------------------------------------S-------------
-S--------S---------------S-----------------------------------S-----------------
--------S--------S--------------S-----------------S-S----------S----------------
------------------SS--------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S------------SS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSSSSSSSSSSSS------------
------------S-------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------S-S---------------
----------S----S---S-----------------------------S-----------S------------------
-------------------------------------------S------------------------------------
----------------------------S-------------------S-----------------------S-------
----------------------------SS----------S---------------------------------------
----------S---------------------------------------------------------------------
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---------------------------------------------------S--------S-------------------
-------S--S---------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
----------------S--------------------S--------S-------------------S---S--SSSS---
-S---S-SSS---SSS--S---SSS-----SSSS---SSS-----S----SSSS--------------SSS---------
--------S------------------------------------------S------SSS------------S------
-------------S-------SSSSSSSS-------------S------------S------------S-----------
--------------S-----------S----S-----S-----S----S---S------S--------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
--------S-------------S---S-S------------S-S--------------S------S---S----------
----S--SS----S--S--------------S----------S-----------S----------------S--------
------SSSSS-S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S--S---------S-----
---S---S-SS-----S-S------------S------------S-S-----SS--------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S--------S------------S--
-----S-----S-S----------------S-SSS-SSS-SSSS-S--S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-S---S---S-SS
--S-S------SS-SSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_521
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------TGATGGCAATGTGGACTTGC---------------------------------------
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>reverse_7682
--------------------------------------------------------------------------------
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-TGGTCCAGATCGCCATGATG-----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
