>input_sequence_78382
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--------------------------------------------------------ATGTCGTCTGCCCTCTCGTTACCG
GCGACGGTGCGGCCGGCATCCACCGGGCCTGGGCGCCAGCTTTACGGGTCGCCGCAGC------GCCACGGTCCGGTGCT
CCGACCGAGGAGGCCGCAGGCCGTTCCGTGCCACGGTCTGCTGGCGCTGCAGCGGAGGACGAGGCGCTGCGGCGCTTCCG
GGCAGG---ACCACTACGGGGGCGCGCTGGTGGACGAGGGCATGGCGGTGCTCCGGCGGAGGATCCGGGAGGCGCGGATG
GCGGAGACAAACTACGAGGCGCCGGCGGGATGGGCGGACTGGGAGAAGCGCTACTACCCGGCCTACGTCTCCGACGTGTC
CGCGCTCGCCGGAGCACTGCAGCTGCTGGCCATGGGCACCAAGCCTGGCGTCGCTGCGGCCGTTGCCGCCATGCTGCTCG
CCGGAGTACCGATCTCCGCTCTAGCAGTCCTGCACCTCCTCGGCCAGGCGGCGGGATCCATTCTGCACCATGTGTC----
TTGA----------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr3B_1_TraesCS3B01G016700
TTATT---------------------------------------------------------------------------
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----------------------------------AGTCTCACTCCTATTTAGGGTCACATTTTGACCATGATTTTAATTA
ATAAAGTATAAGTTACACATAGCAAAATTAATATTGTCAAAAACTATGTTCAAATACGAATTCAATGATATATTTTCCTG
TGACATGTATTAACATTTCGTTAGTTAAATCTATGGTCAAAATTTGATATAAAAGACGAAGAGACCAATAAACTACAACA
GAGAAAATGACAGAGTAGTTGGACCCAAGTGCTA---------------------TTGGTGACGTATGCGATGATTATGA
TCATCTGCGCATGTTTTCTTAGTCGACGAAATTTAGAATTCGGTTCGTTGCAAGAAAAA-----TTCGTGTATTTAGCAT
GCCCTGGCCAGCTGCGTTCCTTCCATCAGAAAGAGATAAAGCAAAAAGA--AATCAATCTTACTCTAT----ATAAAGTC
AGGAACTCATTGTGGAAGACCAGCGTC--------------------------------CTAGATCATACAAAATTAATT
TATTAAGTAT---ATATACCCATCCAGAGAACATGTTGCTTGGACTTTTTT--CTTAAAATTATTAGCCCGCCGCCCAGT
GCCCATGCTAC-------CGAGGCACTACCAGTTCAACTCATATCAAAATG----------------ATATATACTCTTT
TAAATTATCGAGGCCCTACCAG---------TTCAACTCAACGATGATTGATCAA---TTAATCGATGAAACTGAGAG--
--GCGGTAGGCAGGCAGGTGTTAGTTGGAA-------TCCTTCGTGGTTGCCGTGTTGTTGCTTAAGGAGCTAGCTAGGT
GATTACCGCTCCATCCATCGTCAGCTGGACCCTAACCACAATT-AACAACGAGATTCCAAATCACCGGCCAAAACCCGCC
AAGGATAACCGTCCATGAAACCGCGTGAACTCTCTCCACCACTACCTATAAGAGGCAACACACACTCGATCGAGCCGCAT
CTCCCGCCATTATTCAGCATTCAC----CTCCATTGCTTCCTGCTCCTAGCTCCCTCCGTCGCTTTCTTGCTGTCTCATC
TTCTTGTC---------------------------TCAGCCGATTCGATTCCATCGATGTCGTCTGCCCTCTCGTTACCG
GCGACGGTGCGGCCGGCATCCACCGGGCCTGGGCGCCAGCTTTACGGGTCGCCGCAGC------GCCACGGTCCGGTGCT
CCGACCGAGGAGGCCGCAGGCCGTTCCGTGCCACGGTCTGCTGGCGCTGCAGCGGAGGACGAGGCGCTGCGGCGCTTCCG
GGCAGG---ACCACTACGGGGGCGCGCTGGTGGACGAGGGCATGGCGGTGCTCCGGCGGAGGATCCGGGAGGCGCGGATG
GCGGAGACAAACTACGAGGCGCCGGCGGGATGGGCGGACTGGGAGAAGCGCTACTACCCGGCCTACGTCTCCGACGTGTC
CGCGCTCGCCGGAGCACTGCAGCTGCTGGCCATGGGCACCAAGCCTGGCGTCGCTGCGGCCGTTGCCGCCATGCTGCTCG
CCGGAGTACCGATCTCCGCTCTAGCAGTCCTGCACCTCCTCGGCCAGGCGGCGGGATCCATTCTGCACCATGTGTC----
TTGATTGATTCATCATTCATTCGTACGCAGTGTGTGCTCTATG-TGTCTCTATAGTTTCTATACTACTATATAGTGTGCG
AATTTTGAATGTTTGAATTCAGGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCCATCTGACGGTTTATAACACATG
GATTCGCTGCTACAGTGCCATTCAGTGTTATCTGGGTCGTTCCAGAAATATCGATCGATTAGCGCCGAGCAGGG------
----------------------AAACAGTCACGGTGC-----TCGCATGGCCTGGAGTTGTACAAATTGTTTTATAATAT
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-------------------------------------------------------------------------TACTACC
TATGCTGACACCCGTAGAGCTACATGGCCTGTGTGGTCAGATAAACAAATCTGGCAGGAGGTGAAAAAGTA--GACG---
-----AGTAA-----AATGTAAACAAATAAAACCAGGTGCAGCGCCCACATTCGTACTTCCTTTTTAGCGTGCA------
--CATACGATACATGGCCTCAGTGCCGCATTCTGGGTGGAAGG-TTGTAATAAATACTA---------------------
----------------CAGTGAGACATAGCAATAGGTAGGGTAGGCATTACCTAAACCTAGCTATATATGTGTACCCGCT
TTTTCAAAATATATTTTAAATATGTTTGAAAGTGACAAAAA-GTACAAAACAAAATTTCATGCGTATATTTTCACAAAAT
ATGTGCGGAAAACAAAATTCTATGAATAATTGCCTTTTTA-TTTGGCCTCTGTACAAAAGATCAATTTTAGTGCTTCTAT
ATAGCGTTTCACAACATAT-TTTTT-TGT--CTTTTTTGCACGTGCAAAAAAAGTTGTTTAATTCTTCCGTGG-------
ACCTTTCTATTCGCATGTGGAACATGGTGGGAGATTAATGCGTGCAGCTTTTTTCAGAT---TTTTTTGTCATTTACAAA
TGTGTTTTTCAAAGTGAATTCATATGTACTTTTTTTAGAATGTGTTTTTCGAAGTGAACTAATATGTA-TTTTTCAGAAT
TTTTTGTCATTCAGAAATATATTTCTTGAAGAGGGCTCATCTATTTAATTTCCGCAATAGGTACCCCAA
>chr3A_1
TTGTT---------------------------------------------------------------------------
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----------------------------------AGTCTCAACCATATTTAGGGTCATATTTTAATCATGATTTTAATTA
ATAGAATATAAGTTATGCATAGCAAAATTATTATTGTAGAAAACTATGTTAAAAAACGAATCCAACAATATATTTTTTGG
TGACATGTATTAACATTTTGTTAGTTAGATTTATGTTTAAAATTTGGCATAAAATACGAAGAGACTAATACACTACGACG
G-GAAAATGATAGAGTAGTTCGACCCAAGGTGCTGGGATGGATCGGCACTATACGTTGGTGACATATGCGATGATTATGA
TCATCTGCGCATGTTTCCTTCGCTGACT--ATTTATAATTCAGTTCAATGCAAAAAA------GTTGGTGTATTCAGCAT
GC-CTGGTCAGCTGCGTTCCTTCCAATAGAAGGCAATAAAGAGAAAATG--AATCAATCTCACTCTCTATAAATAAAGTC
AGAAATTCGTTGTGGAAAAACCATAGTCTTTGATCATACAATTTCTTTTTTGAAGGGTGGTTGATCATACAAA-TTAATT
TAGTACTAAGTACATATACCCATCCAGAGAACATGTTGCTTGGACTTTTTCTCCTTAAAATAAATAACCCGCCGCCCAG-
------GCTAC-------CGAGGCACTACCAGTTCAACTCATAAGAAAACAGTATATATGTACGTACATATATACTCTTT
TTAATTACCTGGCGCTCTGGTAGGAGTACGATTCAACTCATCGATGATTGATCATTATTTAATCGATGAAACTGAGAG--
--GCGGTAGGCAGGCAGGTGTTAGTTGGAATCCATGGTCCTTCGTGGTTGTCGTGTTGTTGCTTAACGAGCTAGCTAGGT
GATTACCGCTCCATCCATCGTCAGCTGGATCCAAACCACAATTAAACAACGAGATTCCAAATCACCGGCCAAAACCCGCC
AAGGATGACCGTCCATGAAACCGCGTGAGCTCTCTCTACCACTACCTATAAGACGCAGCACCCACTCGATCGAGCTGCAT
CTCTCGCCATTATTCAGCATTCACTTCCCTCCATTGCTTCATTCCTGCTCCTCCCTCCATCGCTTTCTTGCTGTCTCATC
TTCGTGTCTGACAGATCACACGTTCGGCTCATTCTTCAGCCGATTCGATTCCATCGATGTCGTCCGCCCTCTCCTTACCG
GCGACGGTGCGGCCGGCATCCTCCGGGCCTGGGCGCCAGCTTTACGGGTCGCCGCCGC------GCCGCGGTCCGGTGCT
GCCACCGAGGAGGCCGCAGGCGGTGCCGTGCCACGGTCTGCTGGCGCTGCGACCGAGCACGAGGCGCTGCGCCGCTTTCG
GGCAGGACCACCACTACGGGGGCGCGCTGGTGGACGAGGGCATGGCGGTGCTCCGGCGGAGGATCCGGGAGGCGCGGATG
GCGGAGACAAACTACGAGGCGCCGCCGGCGTGGGCGGACTGGGAGAAGCGCTACTACCCGGCCTACGTCTCCGACGTGTC
CGTGCTCGCCGGAGCGCTGCAGCTGCTGGCCATGGGCACCAGGCCTGGCGTCGCTGCGGCCGTAGTCGCCATGCTGCTCG
CCGGCGTGCCGGTCTCCGCTTTCGCAGTCCTGCACTTCCTCGGTCAGGCGGCGGGATCCGTTATGCACCATGCTTCTTGA
TTGATTGATTCATTATTCATTTGTACGCAATGTATGCTCTCAGCTGTGTGTATAGTCTATAC------------------
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---------------------------------------------------------------------
>chr3D_1
ATCGATGTCGTCTGCCGTCTCATTGCAGTCGACGATGCGGCCGGCAGCCCCAGGACTTGGGCGCCAGCTCCACGGGTCGC
CGCCCTGCCATGGTCCGGTGCTGCGACCGAGGAGTCCGCGGGCGGTGCCGACGGCGACGGTGCGTTGCAGCGCGTTCCGC
CGGGACCACTACGGGGGCGCGCTGGCGGACGAGGGCATGACGGTGCTCCGGCGGAGGATCCGGGAGGCGCGGATGGCCGA
GACCAACTACGAGGCGCCGCCGGGGTGGGCCGCCTGGGAGAAGCGCTACTACCGGGCGTATGTCTCCGATGTGTCCACGC
TCGCCGGCGCTCTGCAGTTGCTGGCCATGGATACCAGGCCCGGCGTCGCGGCTGCTGTTGCCGCGCTGGTGCTCGCCGGA
GTGCCGGTGTCCGCCGTCTTCGCGCTGCACCTCCTCGGGCAGGCGGCGGGTTCCGTTTTGCACCTCGTTTCTTGATTGAC
TATCATTCATTCGCCCGCAGTGTGTGCTATCTGTGTCTATAGATAATTAGATACACAGTGCAATGGAGATATGTAATTCT
TTTGGCTTTAGCTTAGTCGATTACGCATACATGCAGATTAATAGTACTAGTACTTTTTTCTTGTTGCACTGGTTTCAGCG
AGCTAATAAAGTCAATGAGACAGCTTGTCAAATGGCCTGCTTCAACGACCCAAAGTCTAATGCTTTGTGGAATGTGATAA
CAACACCAGGCTGATCACTGACTATTGGCTCGCTGAAACCAGTGCAAAGTATATAATGACCCATATATAGTGATTTCAGT
GATTCCTATTTCATATTTTGTAAAAGATTGAGACCGATTATTTCAAAGGAGTGTCATACACATTTTTGTAAGTGATTCCA
GTTTCATATTTCACAAATTTCAGTGAAACTAGGTATTTTAAGAGAGTGACTAGTCTAAAAAATTCAAATTATATCACATA
TTTGAAAAGAAAAATGATTTCAAAAGTGGTTATTTCCAGTATTTCATAGATTGAATTGCTAACTTCAGCAATTGTAGTAG
GTTATTTCAATTATTTCACAGATTGGATCACCAATTTCACAAATTGAAATAACATTTTCGCACACTGCAAAACAAATTCC
ATCACATTCAATTTCACGAATTGTACTCCATCCATTCCCTTATATAAGCCCACTTCGTTTTTCGTGTCAAACATTGACTT
ATAATTTTGGTCAACAAAATATGGATTATATGTCATAAAAAATATAGCATCGGAAAGTTCTTTGAAATGTGCATTCAATG
AAATAATTTTTGTGACACATAACTCACTTTTTGTTGGTAAAATTACTGGTTAAAGTTAGACATAAAAATATGAAGTGGCC
TTGTAGATCTCCTCGACTATAGTCGCAAACCTCTTAGATGTGTTGACCGCCATGCTTTCTACACCGATGATCAGTGTATG
ACACATTAGTAGTATCATCATATTCCACAGATATTTTGTGCACTTGATATGCCCAACTGATTATCTTGTCACAAAGTGTA
AGAATGCACACTTTCAATGATCACAACTTTATTTGTGAGTGCACAAACAATGCATTTTGGAAAGCTTCATTGACACATGT
GATGCAACTTGAATTGATAATATAGCCTCGGCACTTCACTGCGGCGTATGTGATCTGTGGTGACACAATGGTGCCTTTGG
CAAACATTTTAGTAGAGGTGGACACCTTCCGATGCAGTGTCATGGGCAACAACCTCAACGTTTCTGGTTAGTCTCCCTCC
GTTCTGAAATATAGGTCGCTGGGGACCTTGTTCCGACTTGGTGAAAACATGCAAATTGACCTTAATACCAATCCGCCCCC
ATCTTCTTCCTTAGCCCGTCTTCTACCTCCGCCTCCGCCCTCCACCTCTAGTAGATGCATGTGTATGTAAAAAATCACAC
CAATATTTTACCGATCACAATGACACCTCACGCTATGATAAAAGTCTTACAAAATATATTTTGAGGCCATGGTTGAGCAA
GAACAAGGAGGGGACAACATCAAAACATGCAAACATTTAGTAATATAGAAAGTTTTTTGGAAACTACACCGGTTAAAACT
AGTCTCACACAGTTGCAAAAATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGCCCCCTAGGTTGAATGAAAGTTGTAGGTTATATAATAGTGCTAAAAAAATTCTCTCGTTG
CTAGGTTTATATAATAGTGTTGGTCTTGAATGTGGGCAGTTTCTACATTGAGTCACCGGAAAAAAAGTGTGCAGGTGTAA
GCCGTGAAACGGCTGATAGACCTCACGTCCTCGAGGCAATAGGCACAATTGGCATGTGCCAACCCTGCTATGCAGTCCGC
TGGACCGTAAGCCGTGTAGGCAGTTGGAACGATCCCCGATCTCCTCAACTGCAGTGGCGAACTCCCGACATGTTCACCGC
ATGCTTGCTGAACAAGTAATGAGTGCACCGCACGATAACAATATCAGCCTATTCCGCTAATATCTTGTGGGCATGTGATG
CCCGATTAATTATCTTGTCAAAAAGTTTAAGATTGCACACCATGTCAATGATGATCACTTATTTACGTGCCCACGGACAA
CATATGCCTCTTGGAGAGCTTCATTGATGCATGTGCTGCAAACTGGAAGTGTTCGTATCGCCTCTGCAACAACACTAGGG
CGTATGTGATCTTTTCTGCCACAACGGTGTTCGTCCACCAATCTCTCTCCTTCCTCTGTTTTCAACCATGGGCCTCCTGA
TTTCCAATTAGCTGATGCCATGTTAGCCTGTAGGTTCTAATCCGTGACATTGAGTCCGTAAGTGTAGCATCTCTCTTACA
GAATTTACAGAGGATACAATCCTCTGTAAGTCAAAATTTCTATTCCCATGTCTAGTAAATGTCATTTCTCTTCCCTTTTT
CAAGAACCCCGTGAATCGGAATTTCTCCTTAAACCGTCCATACATATACCACGTACTTGCAGTATATCACGTTGGGTGGA
AACCGTCTGGCTAAATGGCGCGTGAATTACTCACACAACGCGTCACACTTATTCACACCATGTGATCATCGTCAGAGGTG
ATCAAGTGGATATGAGAGCTGCAAATGGATGACTCGATTGATAGCAGCTGGTCGATATGGACGTCTCTGCTTGCCGGTGC
TAGCTATATATCCCTAGTAGCATTAGACTTTTCGAGAGCTCTTTTTGGGCCGAGGACTAATTCGTGGATTGATCAATTAA
AAAACCTAGAAAAGAGCCTCGAGGTAGCTGGGCGATGAGACGGTGACATATAATCAGAGAAAGAAAAATGATAAACCCAC
GTACAGTAGGTGATCGCTGGTTCCACCGGCGGCCAGCACACGATTTCTCGTGATGTACGCGATGATTAATTAATGTGCAC
GTGTTTATTGATATCTTCGTTGGCTGAAAAAAGAATTCACATCGATCCAGAATGCATAGCATCTTCTTCCAACAGTGCAT
CATATGAAGTCAAAATTGATCACTGAAAAAGCGTCGATAAATCGACGGGTTGGTATATATAGACGTCTCCGATGTGTTAT
CCTATGGTAGCTAGAAGCATTATACTCTCCCTCTATATCAAAATGTAAGATGTTTTTGATTTTGCATAGGGCATAAAAAA
CGTCGTGGTACATTTTGTTATAGAGAGCGTACTTTGCAATGCATGGATGAATGAACTAATTAGCCTTTTCTAGTAGGATA
CTTGGATGAATTATGATTTAATTAAATTCGAGGTACTACTGTACTTGTAGGATACTTGGATGAACTATGATTTAATTAAA
TTCGAGGTACCCTGTACCTCCGTCCTGGTTTATTAGTCTCACCCGTATCTAGGGTCATATTTTGACTATGATTTTAATTA
ATAAAATATAAGTTATACATAAAAAAAATAATATTGTCAAAAACTACGTTCAAATATAAATCCAACGATATATTTTTTGA
TGACATGTATTAATATTTTGATAGTTAAATATATGGTCAAATTTTGACATAAAATACGAAGAGACCAATAAACTAGGGTG
AAGAAAATGACAGAATAGTTCAACCCAAGTGTTGCGACTCGACAGGCCCTATACGTTGGTGACGTATGCGATGATTATGA
TCATCTGCGCATGTATTCTTAGTCAATGAAATTTAGAATTCAGGTCGATGCAAAAAAAAAAAAGTTGGTGTATTCAGCAT
GT-CCGGTCAACGGCGTTCCTTCCAACAGAAAGTGATAAAGGAAAAAAAATAATCAATCTTACTCTAT----ATGAAGTC
CGAAATCCATTGCGGAAGACCGGCGTC--------------------------------GTTGATCATACAAA-TTAATT
TAGTAAGTGT---ATATACCCATCCAGAGAACATGTTGCTTGGACTTTTTT--CTTAAAATTATTATCCCGCCGCCCAG-
------GCCCCAGGGTGTCGAGGCACTACCAGTTCAACTCATATCAAAATG----------------ATATATACTCTTT
TTAATTATCGAGGCCCTACCAG---------TTCAACTCATCGATGATTGATCATT---TAATCGATGAAACTGAGAGGT
GCGCGGTAGGCAGGCAGGTGTTAGTTGGAATCC-------TTCGTGGTTGCCGTGTTGTTGCTTAACGAGCTAGCTACGT
GATT------------------------------ACCACAATTAAACAACGAGATTCCAAATCACCGGACAAAACCCGCC
AAGGATAACCGTCCATGAAACCGCGTGAATTCTCTGTACCACTACCTATAAGACGCAACACCCACTCGAC----CTGCAT
CTCTCGCCATTATTCATTACTCAC----CTCCATTGCTTCCTGCTCCTAGCTCCCTCCGTCTCTTTCTTGGTGTCTCATC
TTCTTGTGCGAGAGATCACACGTTCCTTTCATTCTTCAACCAATTCGATTCCATCGATGTCGTCTGCCCTCTCCTTACCG
GCGACGGTGCGGCCGGCATCCTCCGGGCTTGGGCGCCAGCTCTACGGGTCGCCGCCGC------GCCACGGTCCAGTGCT
GCGACCGAGGAGGCCGCAGGCGGAGCCATGCCACGGTCTGCTGGCGCTGCGACCGAGGACGAGGCGCTGCGGCGCTTTCG
GGCAGGACCACTACGGT---GGCGCGCTGGTGGACGAGGGCATGGCGGTGCTCCGGCGGAGGATCCGAGAGGCGCGGATG
GCCGAGACCAACTACGAGGCGCCGGCGGGATGGGCGGACTGGGAGAAGCGCTACTACCCGGCCTACGTCTCCGACGTGTC
CGCGCTCGCCGGAGCGCTGCAGCTGCTGGCCATGGGCACCAGGCCTGGCGTCGCTGCGGCCGTAGCCGCGCTGCTGTTCG
CCGGCGTGCCGGTCTCCGCTCTCGCAGTCCTGCACTTCCTCGGTCAGGCGGCGGAATCCGTTCTGCACCATGTTTC----
TTGATTGATTCATCATTCATTCGTACGCAGTGTGTGCTCTACG-TGTCTCTATAGTTTATA-------------------
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>chr3B_997
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----------------------------------------------------ATCGATGTCGTCCGCCGCCTCATTGCAG
TCGACGATGCGGCCGGCAGCACCAGGACTTGGGCGCCAGCTGCACGGGTCGCCGTCGCCGCCCTGCCACGGTCCGGTGCT
GCGACCGAGGAGTCCGCGGGCGGTGCCGATGGC------------------------GACGGTGCGCTGCGGCGCGTTCC
GCCGGG---ACCACTACGGGGGCGCGCTGGCGGACGAGGGCATGGCGGTGCTCCGGCGGAGGATCCGCGAGGCGCGGATG
GCCGAGACCAACTACGAGGCGCCGCCGGGGTGGGCGGCCTGGGAGAAGCGCTACTACCGGGCGTATGTCTCCGATGTGTC
CACGCTCGCCGGCGCTCTGCAGTTGCTGGCCATGGACACCAGGCCGGGCGTCGCGGCTGCTGTTGCCGCGCTGGTGCTCG
CCGGATTGCCGGTGTCCGCCGTCTTCGCGCTGCACCTCCTCGGGCAGGCGGCGGGATCCGTTTTGCACCTTGTTTC----
TTGACGGACTAG-CATTCATTCGCCGGCAGTGTGTGCTGTCTG-TGTCT-------------------------------
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>chr5B_1541
TATAGTCATC----------------------------------------------------------------------
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-----------------------------------------------------------TATACTACTATATAGTGTACA
AGTTTCAAATGTTTGAATTCAGGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCCATCCAACGGTTTATAACACAGG
GATTCACTGCTACAGTGACATTCAGTGTTATTTGGGTCGTTGCAGAAATATCGATCGATTAGCGCCGAGAAGGG------
----------------------AAACAGTCGCCGTGA-----TCGTATGGCCTGGAGTTGTACAAATTGTTTTATACTAC
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-------------------------------------------------------------------------TAC----
----CTGACATCAGCAGAGCTACATGACATGTGCGGTCAGATAAACAATTCTGACAGGAGGTGAAAAAGTA--GAAGGAT
AAAAAAGTAA-----AATATAAATAAATCAAACCGGGTGCAGCGCCCACATTCGTACTTCTTTTTTAGCGTGCA------
--CATACGATGCATGGCCTCACTGCCGCATTCTGGCTGGAAGG-TTGTAGTAAATGCTA---------------------
----------------C----------------------------------CTAAACCTAGCTATATA--TGTACCCGCT
TTTTCAAAATGTATTTCAAATATGTTTGAAAATGACAAAAA-ATACAAAACAAAATTTCATGCGTATATTTTCACAAAAT
ATGTGCGGGAAACAAAATTCTATAAATAATTGCCTTTTTA-TTTTGCCTTTGTACAAAAGATCAATTTTAGTGCTTCTAA
ATAGTGTTTCGGAACACAT-TTTTT-TCTGTC-TTTCTGCACATGCAGAAAAAGTTGTTTAATTCTTCCGTGG-------
AACTTTCTATTCTCATGTGGAACATGGTGGGAGATTAATGCGTGCAGCTTTTTTCAGAA---TTTTTTGTCATTTACAAA
TGTGTTTTTCGAAGTGAATTCATATGTACTTTTTTCAGAATGTGTTTTTCAAAGTGAGATAACATGTACTTTTTCAGAAT
TTTTTGTCATTTAGAAATATATTTTTCGAAGAGGGTTCATCTATTTAATTCCCACAATAGGTACCCCAA
>chr3B_1545
----GTTATC----------------------------------------------------------------------
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-----------------------------------------------------------TATACTACTATATAGTGTACG
AGTTTTGAATGTTTGAATTCAAGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCTATCCGACGGTTTATAACACAGG
GATTCGCTGCTATAGTGCCATTCAGTGTTATCTGGGTCGTTCCAGAAATATCGATCGATTAGCACCGAGCAGGG------
----------------------AAACAGTCACCGTGC-----TCGCATGGCCTAGAGTTGTAC------TTTTATAACA-
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-------------------------------------------------------------------------TACTACC
TATGCTGACACCTGCAGAGCTACATGGCCTGTGTGGTCAGATAAACAAATACGACAGGAGGTGAAAAAGTA--GAAGGAT
AAAAAA-TAA-----AATATAAACAAATCAAACCAGGTGCAACGCCCACATTCGTACTTCTTTTTTAGCAATGCATGTAC
GTCATACGATACATGGCCTCACTGCTGCATTCTAGGTGGAAGG-TTGTAGTAAATGCTA---------------------
----------------CAGTGAGACATAGCAGTAGGTAGGGTAGGCATAATCTAAACCTAGCTATATATATGTACCCGCT
TTTTCAAA------------TATGTTTGAAAATGAC-AAAA-GTACAAAACAAAATTTCATGCGTATATTTTCACGAAAT
ATGTGCGGGAAACAAAATTCTATGAATAATTGCCTTTTTA-TTTTGCCTATGTACAAAAGATCAATTTTAGTGCTTCTAA
ATAGCATTTCACAACACGTTTTTTAA--T--CTTTTTTGCACATGCAAAAAAAGTTGTTTAATTCTTCCGTGG-------
AACTTTCTGTTTGCATGTGGACCATGGCGGGATATTAATGCGTGCAGCTTTTTTCAGAA---TTTTTTGTCATTTACAAA
TGTGTTTTTCGAAGTGAATTCATATGTACTTTTTTCGGAATGTGTTTTTCGAAGTGAGCTAATATGTACTTTTTCAGAAT
TTTTTGTCATCCAGAAATATATTTTTTGAAGACGGTTCGTCTATTTAATTACTGCAATGGGTACCCCAA
>chr4A_1548
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---------------------------------------------------------TCTATACTACTATATAGTGTATG
AGTTTTAAATGTTTGAATTCAGGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCCATCCAACAGTTTATAACACAGG
GATTCGCTGCTACAGTGCCATTCAGTGTTATCTGGGTCGTTCCAGAAATATCGATCGATTAGCGCCGAGAAGGG------
----------------------AA--------------------------------GTTGTACAAATTGTTTTATACTAC
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-------------------------------------------------------------------------TAC----
----CTGACATCCGCAGAGCTACATGACCAGTGTGGTCAGATAAACAATTCTGACAGGAGGTGAAAAAGTA--GAAGGAT
AAAAAAGTAA-----AATATAAATAAATCAAACCGGGTGCAGCGCCCACATTCGTACTTCTTTTTTAGT-----------
--------------------ACTGCCGCATTCTGGCTGGAAGT-TTGTAGTAAATGCTA---------------------
----------------C----------------------------------CTAAACCTAGCTATATA--TGTACCCGCT
TTTTCAAAATGTATTTCAAATATGTTTGAAAATGACAAAAATTTACAAAACAAAATTTCATGCGTATATTTTCACAAAAT
ATGTGCGGGAAACGAAATTCTATAAATAATTGCCTTTTTA-TTTTGCCTTTGTACAAAAGATCAATTTTAGTGCTTCTAA
ATAGTGTTTCACAACACGTTTTTTT-TCTGTC-TTTTTGCACATGCAGAAAAAGTTGTTTAATTCTTCCGTGG-------
AACTTTCTATTCTCATGTGGAACATGGTGGGAGATTAATCCGTGCAGCTTTTTTCATAA---TTTTTTGTCATTTACAAA
TGTGTTTTTCGAAGTGAATTCATATGTACTTTTTTCAGAATGTGTTTTTCAAAGTGAGCTAACATGTACTTTTTTAGAAT
TTTTTGTCATTTAGAAATATATTTTTCGAAGAGGGTTCATCTATTTAACTTCCCAAATAGGTACCCCAA
>chr7A_1550
TATACTTT------------------------------------------------------------------------
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------------------------------------------------------------------CTATATAGTGTACG
AGTTTTGAATGTTTGAATTCAGGCATTGAAATGTGTTTCTGGCCGTTCACTGGGCTCCATCCGACGTTTTATAACACAGG
GATTCGCTGCTACAGTGTCATTCAGTGTTATCTAGGTTGTTCTAGAAATATCGATCGATTGGCGCCAAGCAGGGACCCCA
CTGCATATCAGTTCGTTGAAGCAAACAGTCACCGTGCCATATTCGCATCGCGTGGAGCTGTCCAAACTGTTTTATACTTT
CTTCGTTCTATAATGTAGTGCTTCCTTTATCCCCGTGCTTTAACTTTGACCGTAAATTTAACTACCAAGACCGATTGCGG
CGGGAGCAAAAGTTATATCAGTGAATTCGTATTCAAAAGAAGTTTTCAATTATATAATTTTTTCTTCCGCCGCAGTTGAT
CTCGTTGGTTAAATTTATGATTAAAGTTGAACCTCAAAAAACGTGGACGCATTATATTTTGGAATGGAGGGAGTACTACC
TATGCTGACACCCGCAGGGCTACATGGCCTGTGTGGTCAGATAAACAAATCTGACAGGAGGTGACAAAGTA--GAAGGAT
AAAGAA-TAAAATATAATATAAACAAATCAAACCAGGTGCAGCGCCCACATTCGTACTTCTTTTTTAGCGTGCA------
--CATATA-----------CATGGCCGCATTCTGGGTGGAAGG-TTGTAGTAAATGCTAGTACTGTGAGACATACCAATA
GGTAGGGTAGGCATTAC----------------------------------CTAAACCTAGGCATATA--TGTATCCGCT
TTTTCAAAATGTATTTTAAACATGTTTGGAAAACTCAAAAA-GTACAAAACAAAATTTCACACGTATATTATCACAAAA-
ATGTGCAGGAAATAAAATTCTACGGATAATTGCCTTTTTATTTTTTTCTCTGTATAAAAGATAAATTCTAGTGCTTCTAA
ATAGCATATCACAACACGTCTTTTT-TGT--CTTTTTTGCACATGCAAAAAAAGCTGTTTAATTCTCCCGCAA-------
AACTTTCTATTCGCATGTGGAACATGGTGGGAGATTAATGCGTGCAACTATTTTCAGAA---ATTTTTGTCATCTACAAA
TGTGTTCTTCGAAGTGGGTTCATATGTATTTTTTTAAGAATGTGTTTTTCAAAATGAGCTCATATGTAAG-TTTCAGAAT
TTTTTGTCATTTAGAAATGTATTTTTCGAAG--------------------------------------
>chr7B_1555
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----------------------------------------------------------------TACTATATAGTGTGCG
AGTTTTGAATGTTTGAATTCAGGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCCATCTGATGGTTTATAACACATG
GATTCGCTGCTACAGTGCCGTTCAGTGTTATCTGGGTCATTCCAGAAATATCGATCAATTAGCGCCGAGCAGGG------
----------------------AAACAGTCACGGTGC-----TCGCATGGCCTGGAGTTGTACAAATTGTTTTATAATAT
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-------------------------------------------------------------------------TACTACC
TATTCTGACACCCGCAGAGCTACATGGCCTGTGTGGTCAGATAAACAAATCTGGCAGGAGGTGAAAAAGTA--GACG---
-----AGTAA-----AATATAAACAAATAAAACCAGGTGCAGCGCCCACATTCGTACTTCCTTTTTAGCGTGCA------
--CATACGATACATGGCCTCAGTGCCGCATTCTGGGTGAAAGG-TTGTAATAAATGCTACA---GTGAGACATAGCAATA
GGTAGGGTAGGCATTAC----------------------------------CTAAACCTAGCTATATATGTGTACCCGCT
TTTTCAAAATGTATTTTAAATATGTTTGAAAGTGACAAAAA-GTACAAAACAAAATTTCATGCGTATATTTTCACAAAAT
ATGTGCGGGAAACAAAATTCTATGAATAATAGCCTTTTTA-TTTTGCCTCTGAACAAAAGATCAATTTTAGTGCTTCTAA
ATAGCGTTTCACAACATA--TTTTT-TTT--CTTTTTTGCACGTGCAAAAAAAGTTGTTTAATTCTTCCGTGGACCTTGG
ACCTTTCTATTCGCATGTGGAACATGGTGGGAGATTAATGCGTGCAGC-TTTTTTCAGATTTTTTTTTATCATTTACAAA
TGTGTTTTCCGAAGTGAATTCATATGTACTTTTTTTTGAATGTGTTTTTCGAAGTGAACTAATATGTATTTTTTCAGAAT
TTTTTGTCATTCAGAAATATATTTCTTGAAGAGGGCTCATCTATTTAATTTCCGCAATAGGTACCCCAA
>chr4A_1578
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-------AATGTTTGAATTCAGGCATTGAAATGCGTTTCTGGCCGTTCATTGGGCTCCATCCAACGGTTTATAACACAGG
GATTCGCTGCTACAGTGCCATTCAGTGTTATCT-GGTCGTTCCAGAAATATCGATCGATTAGCGCCGAGAAGGG------
----------------------AAACAGTCGCCGTGA-----TCGTATGGCCTGGAGTTGTACAAATTGTTTTATACTAC
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-------------------------------------------------------------------------TAC----
----CTGACATCCGCAGAGCTACATGACCTGTGTGGTCAGATAAACAATTCTGACAGGAGGTGAAAAAGTA--GAAGGAT
AAAAAAATAA-----AATATAAATAAATCAAACCGGGTGCAGCGCCCACATTCGTACTTCTTTTTTAGCGTGCA------
--CATACGATGCATGGCCTCACTGCCGCATTCTGGCTGGAAGG-TTGTAGTAAATGCTA---------------------
----------------C----------------------------------CTAAACCTAGCTATATA--TGTACCCGCT
TTTTCAAAATGTATTTCAAATATGTTTGAAAATGATAAAAA-TTACAAAACAAAATTTCATGCGTATATTTTCACAAAAT
ATGTGCGGGAAACAAAATTCTATAAATAATTGCCTTTTTA-TTTTGCCTTTGTACAGAAGATCAATTTTAGTGCTTCTAA
ATAGCGTTTCACAACACG--TCTTTTTCTGTC-TTTCTGCACATGCAAAAAAAGTTGTTTAATTCTTCCATGG-------
AACTTTCTATTCTCATGTGGAACATGGTGGGAGATTAATGCGTGCAGC-TTTTTCAGAA---TTTTTTGTCATTTACAAA
TGTGTTTTTCGAAGTGAATTCATATGTACTTTTTTCAGAATGTGTTTTTCAAAGTGAGCTAACATGTACTTTTTCAGAAT
TTTTTGTCATTTATAATTAAATTTTTCGAAGAGGGTTCATCTATTTAATTTCCGCAATAGGTACCCCAA
>chr3A_1762
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----------------------------------------------------------------AATTATTTTATAATAT
ACGTACTGTGCG--------------------------------------------------------------------
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TATGCTGACACCCGCAGAGCTACCTGGCATGTGTGGTCAGATAAACAAATCTGACAAGAGGTGAAAAAGTATAGAAGGAT
--AAAAATAA-----AATATAAACAAATCAAACCAGGTGCAGCGCCCACATTCATACTTCTTTTTTAGCGTGCA------
--CATACGATACATGGCCTCACGGCCACATTCTGGGTGGAAGGTTTGTAGTAAATGCTACA---GTGAGACATAGCAATA
GGTAGGGCAGGCATAAC----------------------------------CTAAACCTAGGTATATA--TGTACCCGCT
TTTTCAAAATGTATTTTAAATATGTTTGGAAATGACAAAAA-GTACAGAACAAAATTTCACGCGTACATTTTCACAAAAC
ATGTGCGGGAAACAAAATTCTATGAATAATTGCCTTTTGA-TTTTGCCTCTGTACAAAATATAAATTTTAGTGCTTCTAA
ATAGCGTTTCACAACACG--TTTTT-TTTGTCTTTTTTGCACATGCAAAAAAAGTTGTTTAATTCTCCCGTGA-------
AACTTTCTATTGGCATGTGGAACATGGTGGGAGATTAATGCACGCAGCTTTTTTCAGAA---ATTTTTGTCGTTTACAAA
TGTGTTTTTCAAAGTGAATTCACATGTACTTTTTTCAGAATGTGTTTTTCGAAGTGAGCTCATATGTACTTTTTCAGAAT
TTTTTGTCATTTAGAAATGTATTTTTCGAAGAGGGTTCATCTATGTCATTTCCGCAATAGGTACCCCAA
>SNPs
--S-----------------------------------------------------------------------------
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------------------------------------------S-S------------S----------------------
-----S---------S---------------------------------------------S---S----------SSS-
------------------S-----------S----------------S------S---------------------S--S
--------------------S----------S-S----------------------------------------------
-----------------------------------------S-----S-----S------------S-------S-----
--S----S-----------------S-------S-------S-----S--------------------------------
--S--S---------------S-------------------------------------S-S-----------S------
--S---------------------------------------------------------------S------------S
SSSSSS--------------------------------------------------------------------------
-S--------------------------------------S-------------S-------------------------
------------------------------------------------------------------S-------------
-----------------------------S--S-----------------------------------------------
------------------------------------S----------------S-------S-------------S----
---S----------------------------------------------------------------------------
-------------------------------------------------------------------------S------
---------------------S---------------------------------S------------------------
S--------------------S--S-------------------------SS-S-----------------------S--
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---------------S-------------------------S--------------------------------------
-------S---S----------S--------------------S---------------S-------------S------
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-S------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
------------------S-------------------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------------S----------------S-S-----------------------------
----------S---------------------------------------------------------------------
--------S-----------------------------------S----------------------------------S
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>forward_4997
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-----------------AAACCGCGTGAACTCTCTCC-------------------------------------------
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>reverse_6255
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--------------TAGAGCTACATGGCCTGTGTG---------------------------------------------
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