>input_sequence_78324
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGCAAGGCCCTCCTGGTCTGCGTCCTCCGGCTCCATTC
TACCCCGGTGGATACCCTCCCCCGCCGGGCTGGCCTGGTTACCCTATGCCATTTGTTCCGGTGCAAGGGTACGGAGCTCC
ACCTGGTGCGTATCCTCAACCCGGAGGATACCCTCCAGCTGGGTATCCACAACAACATGGCCATGCGCCGCAAGCTGGTT
ATGCCGTCCATGATAAATCGAAGAAGAAGTCTTCAAAGAAAGGTATTTTTCATATCTTTCACATTCTCCATGTCATTGCT
TGT----CATGGTTACCTTGCTAGAAAGGGCTGGAATGCAAAACCTTATTTTGGGACATATATATAAGACACGTATTGAA
A-------TACCATGTATGCAGGAAAAAAAGGTAAGGGTGGTGGCTTCGGCTCATTCCTCGCCGGTGCCGCTAGCGGTGC
AGTTACGGTACTTGGAGCTGTATTGGCTGAAGATGAAGAACAGTCTTCTGGCAAGTTCAAATGGAAGTGA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr7D_1_TraesCS7D01G462900
AATTTGACTTTTCAAAAGGATATATGAATCGTGCAATTATGACAAGAAGCCTTGTGTAATTTTGTGCTATAGTAGGGCTG
AATGTACCTGCACCAGAATAGTAAAGCGGTGCAGCTCTAAGCCTCTAACCTGGAATGATTCGCACGATTTGTTTAAATGA
AATGCACATATTATATTTTATTTTGCGGCAAGTGTAACACGATCAATGTTTTAGCACGACCAACTCCAGAAAAATATGAA
GAGAAAAAACAAC-TTTTTGTACCAAAAATGTAGGATTTTGAAAAAAAGAAACGTCGCAGGCTCTATTCCTTATAAAAGT
ACTCCTACTTATATTTTTCTGGAGTACTGAAATTCCCCAAAACAGTTTTTCCCCTGTCAGTTAGAGAAATGATACTCCTT
G-------------------------------------------------ACAGTCCATCAACTTTTTTTTTTTTTGAGA
TTTTGACAGTCCATCAACTTCTTTTAACGGGCGATACAAGTTTGGGCTCGGAATCTTGGATCGGCCGGTAAAGAAGTATG
GGAAAAATAAAGTAAATGGAGACGATCAGACCAACACGGGTGTGCACAAAACCCAG------------------------
---TCAAAAGCCCTAAAAATGAAGTCTGGGTCAAAAAGGTTGTGCATGTTGAACAAGTCAAGATGAGCGCCCGG-GGGCC
CTATCTTGATGTGCATCCACATGAACAAATAGAATTTCTAAAGATAGTAAACTTTGCACTGACTGGTCCCTGGTTTTGCT
CTCAACCGTGCTCGCAAGTTGTTATTCCCGGCATGAGGAGAAGAAGAGACTAGCTACCGTATGAA-AAATCAGCACCGAT
CTCTCTCCCAAGTTTCAAGCCAATCTTCCCGTTTCATCGTTGCCGGCACCAACTTTTTCGGAGTTCTCCCCGCGTCGCCC
GACCGGTAACATCTTGTTATCTCTCGCAAATCGTCCATAGGCATTTCGAATCACCATGATCATAGCTTCATCCTTGCGAA
TTCTCTGGTCCATCCAGA--TAGTTACCAAAGGGGGAAGGCATGCAAGGCCCTCCTGGTCTGCGTCCTCCGGCTCCATTC
TACCCCGGTGGATACCCTCCCCCGCCGGGCTGGCCTGGTTACCCTATGCCATTTGTTCCGGTGCAAGGGTACGGAGCTCC
ACCTGGTGCGTATCCTCAACCCGGAGGATACCCTCCAGCTGGGTATCCACAACAACATGGCCATGCGCCGCAAGCTGGTT
ATGCCGTCCATGATAAATCGAAGAAGAAGTCTTCAAAGAAAGGTATTTTTCATATCTTTCACATTCTCCATGTCATTGCT
TGT----CATGGTTACCTTGCTAGAAAGGGCTGGAATGCAAAACCTTATTTTGGGACATATATATAAGACACGTATTGAA
A-------TACCATGTATGCAGGAAAAAAAGGTAAGGGTGGTGGCTTCGGCTCATTCCTCGCCGGTGCCGCTAGCGGTGC
AGTTACGGTACTTGGAGCTGTATTGGCTGAAGATGAAGAACAGTCTTCTGGCAAGTTCAAATGGAAGTGATAAACCAAGA
AAAAAAATGCAATTACCATTTTGTCTTTTGATCGGTGGAGCGAAAAACTACTACTTTTAAGATGTGGGAAG---------
---ATCATAATGCCAGTTATTTCTCTCTTATGGATTTGTAGTACAATTTGATGTATCGCAGATTTGTTCAACACAT--GA
CACAGATTCCGTGCTCAAATCTATA------CATCTATAGAAGGACAGAAAATCGGCTAAACATGAGTTTTGAACGCCCG
CAATTAATTCTATGGAAAATTCTTCAATGATTTTTAGGATGGATAATATGTTTC-CTGCCCGTGCACCATCTTGTAGTAA
TTACCGTCGTGCTCACGCCTCTCCGTCATTGGATTGACATCGTGCGGATGGACGGATGGTGACTGTTTGTGGGGGACTAT
G-TCGACTTCTCGCC-TGCGAAGGTGAGGGAAGACGCGAACATGTCTCGTAGTCAAGAAACACGCTTTCCTTATCCAAAA
TATGTGCTTCAATGGGAGAGCCATAGTCAGTGTACGTCAGTACATCACAAATTGATGAATTGGTTGTAATGGACGTCACT
TTGTCACCACACAAAATTGTTTGAGTGGTGCTAGGGGAGAGAGAGGTTAGTAAAACTCTACGTCTTTGTGCATGCATTTC
GGAGGTTTTAGCTTTCGAAAGTGTTGTTTTCGCTCCTTTCAGGTTATAACACTAACACTCGTAGACTCATCATCATGGAG
AGAAGGTAAGGTGGTGGTGAAGAGGGGGAAGGACGGTGGGAAGGTGTCGGTGGGAGGCGAACCCTCGTCCTCTAGTCGCC
TCTCAGGGCGATGTAAGGGCCTCTTGTTTTTTCGCTTGATCTATTCGGCCAGGAAAACTTATCTCCCCAGGCTAAGGCCG
CCAACAACATCAAGGACATCCCGTGTCGGACATCGTGGAACCCGAACCTATCTATGCGTGTGGGTATCTCCGAGTAGAAC
CCGCCGTTGGGGCGCTGGGGGACGCCGCGGTAGCCCGACGCTCCTCGGCGGCG
>chr7B_204
CAATGTTC------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TAGCACGACGAACTCCACAAAAATATGAA
GAGAAAAAACAACTTTTTTGTACCAAAAATGTAAGAATTTGATTTTTG---ACGTCGCGGCCTCTCTTCCTTATAAAAGT
ACACCTGCATATATTTTTCTGGAGTACTGAAATGCCCTTAAACAGTTTTTTCCCGGCCTGTTAGAGAAATGAAGAAGCTT
GTCAGGCTGGGAATTTCCTTCTTATCCCAGTAAGTTATCCTACACTTAGAACGGCCCATCAACCTTTTTTGACA------
-----------------------------TGCGATACAAGTTTGGGCTGGGAATCTTGGATCGGCCGGTAAAGAAGTACG
GGAAAAAATAAGTAAATGGAGACGAT---------------------------CAG------------------------
---TCAAAAGCCCTAAAAAAGAAGTCTGGGTCAAAAAGGTCGTGCATGGTGAAGAAGTCAAGATGAACCCCCCG-GGGCC
CTATCTTGACGTGCATCCACATGAACAAATAGGATTTCTAAAGATAGTAAACTTTGCACTGAATGGTCC-TGGTTTTGTT
CTCAACCATGCTCGCAAGTTGTTATCCACGACATGAGGAGAGGAAGCTACTGATCGCAACCGTATCAAATCAGCATCAAT
CTCTCTCCCAAGTATCAAGTCAATCTTACAGTTTCATCGTCGCCGGCACCATCTTTCCA-GAGTTCTCTCCGCGTCGCCC
CACCGGTAACATCTTATTATCCCTTGCAAATCGTCCATAGGCATTTCGAATTGCCATGATCATAGCTTCATCCCAGTGAA
TTCCCTGGTTCATCCAGATATAGTTATCAAAGGGGGAAGGCATGCAAGGCCCTCCTGGTCTGCGTCCTCCGGCTCCATTC
TACCCCGGCGGATACCCTCCTCCGCCGGGCTGGCCTGGTTACCCTATGCCATTTGTTCCGGTGCAAGGGTACGGAGCTCC
ACCTGGTGCGTACCCTCAACCCGGAGGATACCCTCCAGCTGGGTATCCGCAACAACATGGCCATGCGCCGCAAGCTGGTT
ATGCCGTCCATGATAAATCGAAGAAGAAGTCTTCAAAGAAAGGTATTTTTCATATCTTTCGCATTCTCAGTGTCATTGCT
TGTCATGCATGGTTACCTTGCTAGAAAGGGTA-GAATGCAAAACCTTATTTTGGGACA---ATATAAGACACGTATTGAA
AATTGAAATACCATGTATGCAGGAAAAAAAGGTAAGGGTGGTGGCTTCGGCTCATTCCTCGCCGGTGCCGCTACCGGGGC
AGTTACGGTACTTGGAGCTGTATTGGCTGAAGATGAAGAACAGTCTTCTGGCAAGTTCAAATGGAAGTGATAAAGCAAGA
AAAAAAATGCAATTACCATTTTGTCTTTCAGTCGGTTGAGCAAAAAATCACTTCTACTTCGAAGA-AAAAAAATGCAATT
ACCATCACAATGCCGGTTATTTCTCTCTTATGGATTTGTAGTACAATATGATCTATCGGAGATTTGTTCAGCACATAAGA
CAAAGATTAAATGCTCGAATATATATACATACATTAATAGAAGGACAGAAAGGCGGCTAAACATAAGTTATGCATGCCTG
CAATTACTGCTATGTAAAATTCTTCAATGATTTTTAGGATGGAAAATATGTTTC-CTGCCCGCGCACCATCTTGTAGTAA
TTACCGGCGTGCTCACGCCTCTCCGTCATTGGAT-CACATGGTGCA--------AATGGTGGCTGTTTGTGGGGGAGTAC
ACTCGACTTCTCTCTGTGCGAAGGCGAGGGACAGTGCGAACATGTGTCGTAATCAACAAACGTGCTTTGCTTGTCCAAAA
TATGTGCTTCAATAGGAGGGCCGCGATTAGTGTACGTGAGTACACCACGAATTGATGAATTGGTCGTAATGGACGTCACT
TTGTCACCACCCGAAATTGTTCGAGTGGTGCT-GGGG---GAGAAGTTAGTAAAGTTGTACGTATTTGTGCATGCATATC
AAAGGATTTAGCTTTCGATAGTGTTGTTT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr7A_445
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CAACTTTTTTTAACGTGCGATACAAGTTTGGGCTGGGAATCTTGGATCGGCCGGTAAAGAAGTACG
GGTAAAATGAAGTAAATGGAGACGAT---------------------------CAGACCAACACGGGTGTGCACAAGGCC
CAGTCAAAAGCCCC-AAAAAGAAGTCTGGCTCAAGAAGGTTGTGCATGGTGAAGAAGTCAAGATGAACCCCTCAAGGACC
CTATCTTGATGTGCATCCACATGAACAAATAGAATGGCTAAAGATAGTAAACTTTGCACCGACTGGCCC-TGGTTTTGCT
CTCAGCCGTGCTCACAAGTTGTTATCCCCGGCATGAGGAGAAGAACCTACTAGCTACCATATGAA-AAACCAGCACCAAT
CTCTCTCCCAAGTTTCAAGCCAATCTTCCAGTTTCATCATCGCCGGCACCATCTTTTTCGGAGTTCTCTCCCCGTCGCCT
CACCGGTAACATCTTATCATCTCTTGCAAATCGTCCACATGCATTTCGAATTACCATGATCATAGCTTCATCCTTGTGAA
TTCTCTGGTCCATCCAGG--TAGTTATCAAAGAGGGAAGGCATGCAAGGCCCTCCTGGTCTGCCTCCTCCGGCCCCATTC
TACCCCGGCGGATACCCTCCTCCGCCGGGCTGGCCTGGTTACCCTATGCCATTTGTTCCGGTGCAAGGGTACGGAGCTCC
ACCTGGTGCGTATCCTCAACCCGGAGGATACCCTCCGGCCGGGTATCCACAACAACATGGCCATGCGCAGCCCGCTGGCT
ATGCCGTCCATGATAAATCGAAGAAGAAGTCTTCAAAGAAAGGTATTTTTCACATCTTTCGCATTCCCCATGTCATTGCT
TGT----CATGGTTACCTTGCTAGGAAGGGCCGGAATGCAAAACCTTATTTTGGGACATAC--ATAAGACACGTATTGAA
A-------TACCATGTATGCAGGAAAAAAAGGTAAGGGTGGTGGCTTCGGCTCATTCCTCGCCGGTGCCGCTAGCGGTGC
AGTTACGGTACTTGGAGCTGTATTGGCTGAAGATGAAGAACAGTCTTCTGGCAAGTTCAAATGGAAGTGATAAACCAAGA
AAAAGAATGCAATTACCATTTTCTCTTTCGGTCGGTTCAGCAAAAAATTACTTATATGCTTCTAAGAAAAAAATGCAATT
ACCATCATAATGCCGGTTATTTCTCTCTTATGGATTTGTAGTACAATATGATCTATCGGAGATTTGTTCAGCACATAAGA
CAAAGATTAAATGCTCGAATCTATATACATGCATCAATAGAAGGACAGAAAGGCGGCTAAATATATGTTTTGCATGCCTG
CAGTTACTGCTATGTAAAATTCTTCAATGATTTTTTCGATGGAAAATATGTTTTGCTGCCCGCGCACCATCTTGTTGTAA
TTACCGGCATGCTCACGCCTCTCCGTCATTGGATTCACATCGTGCA--------GATAGTGGCTGTTTGTGAGGGACCAC
ACTCGACTTCTCGTTGTGCGAAGGCGAGGGAAAATGCGAACATGTGTCGAAATCAACAAACGTGCTTTCCTTATCCAAAA
TATGTGCTTCAATGGGAGGGCCGCGATTAGTGTACGTGAGTACACCACGAATTGATGAATTGGTCGTAATGGACGTCACT
TTGTCACCACCCAAAATTGTTCGAGTGGTGTT-GGGGAGAGAGAGGTTAGTAAAATTGTACGTATTTGTGCACGCATATC
GAAGGATTTAGCTTTTGATAGTGTTGTTTCCCCTCATTTC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
S-S-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-------S-----------
---------------------------------S--S-----SSSSSSSSS-------S-S----S--------------
--S---S-S------------------------S---SS-----------S---S-S-S-------------SSSSS---
----------------------------------------------------S-S--------S------SSSSSSSSSS
SSSSSSSSSSSSSS------S--------S------------------S-----------------------------S-
--------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
-------------------S----------------------------S----S------------S-S---S-------
---------------------------------------------------------------------S----------
-------------------------S--------------------SS----------S------------------S--
-----------------------------S----------S----------S----------------S-----------
S--------------S--------S--------------------------S------------------------S---
--------------------------S-----------------------------------------------------
--------S-----------S-----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------------------------S----------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-S-----S----S-----S----S--S--SS----S-SS--S---------
--------------S--------------------------------S----S-----S-----------S---------
--S-----SSS-----S------------------S---------------SS-----------S-------S-S---S-
------S-S-----S----------------------------S------------------S-----------------
------S----------------------------S---------SSSSSSSSS-------S-----------------S
S-------------S---------S-------S-S----------S-----S----S----SS-----------------
------------------S---SSSS-S---------S------S---S---------------S---------------
----------S----------S----------S----------------------S-S-----S-------------S--
-S---S------------S----------S-S---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_201
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTTGCGGCAAGTGTAACACG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1825
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GAGTTTTGAACGCCCG
CAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
