>input_sequence_78313
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---------------------------------------------------ATGCCTCCCAAGCTCGACCCGTCCCAGAT
CGTGGAGGTGTATGTCCGCGTCACCGGCGGGGAGGTCGGCGCTGCGTCGTCCCTGGCCCCCAAGATCGGTCCGCTCGGTC
TCTCCCCAAAGAAGATCGGAGAAGACATCGCCAAGGAGACGGCCAAGGACTGGAAGGGCCTCCGCGTCACCGTCAAGCTC
ACCGTCCAGAATCGCCAGGCCAAGGTGTCCGTCGTCCCCTCCGCCGCAGCCCTCGTCATCAAGGCGCTCAAGGAGCCCGA
GAGGGACCGCAAGAAGGTCAAGAACATCAAGCACAGCGGCAACATCAGCCTCGACGACGTCATCGAGATCGCCAAGATCA
TGAAGGTCCGCTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTCGGCACCTGCGTCAGCGTCGGCTGCACC
GTTGACGGCAAGGACCCCAAGGATCTGCAGACGGAGATCGACGACGGCGAGGTGGAGATCCCCGCTTAA-----------
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>chr6B_1_TraesCS6B01G295500
GAAGATGCTAAAGAGGAGGCCTGGTGTAATTCGCTATACTTTTTTGGGAGGAACTAATTAAGGTTTACCTTTTGGAGGCC
TCCAACATAGATCATTTTCTTGGTTCGGGAGTGCACCAAGTGATGCGCCCTATTCGGCGCCACATGTTGCGTGCTAGGTG
CACCCTCGGGATTTCTGTTCTGCACCCGTTTTTGGGGTTCATTTGGTTTTTTGGCCCTTTGCTTGGTTTTCCCGAGGTTT
TGGCTGGTTTTTTCGGGAAGCATTACTTTTTCGCGAGAAGCATAGCACAACTATGCTTCCACAAGAAACATAAATGTGCT
TCTTGAAAATTTAAAAGAACATTTGTGCTTCCAAAAAAAGTTG-AAAAGGCATAGTTGTGCTTCGCCCCGAAAGTAGAAA
AGCACAACTATGCTTTCAAATTATGGTTTTTGATTTTTCCTAATTTTTGGTCTTTTTTA----TCTCTGATTTTTTGTCT
TTGTTTCTTTTCTGGTTTCTGTTATTTTATTTCCGGTATCCAATGGTGAAAATGAC-CATGATTTAGACTCAAGGTGCAA
GAGATAAAATTCATTGAAAAAATGAATCATCTATGTAAAAGGGCAAAACTCTCAGGTAGCGACAAGTTGGTGCACATGCA
GTGCGTCATTTGTCACCATCATAAAAGGTGGGAGTGAGCTTTGTAACGTACCCCTTCTAGAAAAATTAATTAGGGGTACC
CCTAATTACTGATTTCATACATTT--TATATTCTTATTAAAAGCATCCACTACTTCAGCCCAACAGGTGCGGTGCAGCCC
ATTTA---ATCTCCCAAAGGGCCTAACTCTGACGATCCTTGACGGCCCAATACACCCACACCACCGAGTAAACCACCAAA
CCCTAACCCCCATCCACCCCAGACAGTATATAATCTCAACACAAGCTCGCGGCTCAAACCCTAGCATCTCCAACTCCAGC
CGCCGCCACACACTCCCCGCAGCCAATCCTCCCCAACCCAAGCTCGCAGCCATGCCTCCCAAGCTCGACCCGTCCCAGAT
CGTGGAGGTGTATGTCCGCGTCACCGGCGGGGAGGTCGGCGCTGCGTCGTCCCTGGCCCCCAAGATCGGTCCGCTCGGTC
TCTCCCCAAAGAAGATCGGAGAAGACATCGCCAAGGAGACGGCCAAGGACTGGAAGGGCCTCCGCGTCACCGTCAAGCTC
ACCGTCCAGAATCGCCAGGCCAAGGTGTCCGTCGTCCCCTCCGCCGCAGCCCTCGTCATCAAGGCGCTCAAGGAGCCCGA
GAGGGACCGCAAGAAGGTCAAGAACATCAAGCACAGCGGCAACATCAGCCTCGACGACGTCATCGAGATCGCCAAGATCA
TGAAGGTCCGCTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTCGGCACCTGCGTCAGCGTCGGCTGCACC
GTTGACGGCAAGGACCCCAAGGATCTGCAGACGGAGATCGACGACGGCGAGGTGGAGATCCCCGCTTAAGAAGGTAATGA
CCAAATTCTTGTTTGGCAGTAATTATTTGTTGCTTTGCTGGTACCAGAAATGCTGTTATGGTCTGCCAACTTGTTAGGGG
GAGAGTGGCGTGTAATAGCATGTCGTATGTACTTCAATTATT--------AGCTAGGTAGAATGTGGGAAGATTATCTGT
TGATTCAGTGTTCTTGCTAGTAACTATAGACGATTGTAGGTAGATTCCGTGGATTGTGAACTTGTATTGTTAGGATGAAT
GTTGCTCATGCTAGTCCATTTTATACTTTTATCTGATCACACTGTATTCTTAGCTATGAATTTAACATTCTGTAATTAAA
GTGCGAATGAATCCATTGTAACAGCTTTATGTTTAATCATGCAGGCTTGGCTTTGGGCAGGTTGTTATGTGAGGCTGCTG
AAGTAGTTTCTCCTATCTAGATGCTTCCTGATGCATTTGAGAGAATGGATGTGATATCTTCACTTGTTCTACTCTTGCTG
AAGAAGAAACTTTTGTCATGCTTTACTGGTTCCATTGTGAGACTATTTTTTACTGGTTTAATGAGTACCTTGCGGAATCA
ATCAATGTTATTATGGCAGCTAGAATATCATATGTTGAGTTTTGTCATTGATGTTTTGAGCGATTCTTATATATTGTTAG
TCGCTGCATTTGCTTTGCTGTCTTGTTGCTTAGGGCAGTTGATTGCCGCTGGATTATTTCATCACTAGATACATTGAATT
CAGTTATCATGATGAAAATTGCCTTATTTGAACTTAACCAAATTGAAAATTCAGATTTCAAAATGAACTGCAAAAAAGTC
TTGTATTTTGATACGGAGAAGTATGAATGGAAAGGAATTCAGACATGGATTCTACATTGATAGAATGACAGAACTGTAGA
TTGTACTG--------TTGCATCCTTCGACAGCCATTTTGCATTTGGAATTAGGTTTGCCCAATTTTCTGAAAGACTTGA
ATTTTGCTCTGTCTTGA-CTGCTACTGTTTGAAAATTTGTCGGTCT
>chr6D_339
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------------------ACAATTGTGCTTCCAAAAAAAGTTGGAAAATGCATAGTGGTGCTTCCCTTT-----------
-GCACAATTGTGCTTTCAGGTTTGGTTTTCGA--TTTTCCTGACTTTTGGTCCTTTTTTCTGGTTTATGATATTTTTTCT
TTGTTTTTGTTT---------TTTTTATATTTTTGGTATCTCACGGTGAAAATTGTTCATGATTTGGATGCAAGGTGCAA
GAGATAAAACGTTTTGAGAAAATGAATCTACGGAAAAGG--------ACTCTCAAGTAGCGAAAAGTTGGCACACATGCA
GTGCG-CACTTGTCACCATCGTAGAAGGTGGGAGTGAGCTTTGTAA---------------------------GGGTACC
CCTAATTACTTATTTCATATTATATATATATTTTAATAAAAAACACCCACTACTTCAGCCCAACATGTGCGGCGCAGCCC
ATTTA---ATCTCCCAAACGGCCTGATTCTGACGATCCTTCACGGCCCAATACACACACACCACCGAATTAGCCACCAAA
CCCTAACCCCCATCCACCCCAGACAGTATATAATCTCAACACAAGCGCGCCGCTCAAACCCTAGCATCTCCAACTCCAGC
CGCCGCCACACACTCCCCACAGCCAATCCTCCCCAGCCCAAGCTCGCAGCCATGCCTCCCAAGCTCGACCCGTCCCAGAT
CGTGGAGGTGTATGTCCGCGTCACCGGCGGGGAGGTCGGCGCTGCGTCGTCCCTGGCCCCCAAGATCGGCCCGCTCGGTC
TCTCCCCAAAGAAGATCGGAGAAGACATCGCCAAGGAGACGGCCAAGGACTGGAAGGGCCTCCGCGTCACCGTCAAGCTC
ACCGTGCAGAATCGCCAGGCCAAGGTGTCCGTCGTCCCCTCCGCCGCAGCCCTCGTCATCAAGGCGCTCAAGGAGCCCGA
GAGGGACCGCAAGAAGGTCAAGAACATCAAGCACAGCGGCAACATCAGCCTCGACGACGTCATCGAGATCGCCAAGATCA
TGAAGGTCCGCTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTTGGCACCTGCGTCAGCGTCGGCTGCACC
GTCGACGGCAAGGACCCCAAGGATCTGCAGACGGAGATCGACGACGGCGAGGTGGAGATCCCCGCTTAAGAAGGTAATGA
CCAGATTCTTGTTTGGCAGTAATTATTTGTTGCTTTGCTGGTACCAGAAATGCTGTTGTGGTTTGCCAACTTGTTAGGGA
GAGTGTGGCATGTGATAACATCTCATATGGACTTGAATTATGATAATTAAAGCTAGGTAGAATGTGGCAAGATTATTTGT
TGATCTAGTGCTCATGCTAGTAACTATAGATGATTGTAAGTAGATTCCCTGGATTGTGAACTTGTATTGTTAGGATGAAT
GTTGGTCATGCTAGTCTATTTTATTCTTTTGTCTGGTCACATTGTATTCTTTGCTATGAATTTAACATTCTGTTCTTAAA
CTGCGTACAAATCCATTGTAACAGCTTTATGTTTAATCATGCAGGCTTGGCTTTGGGCAGGTTGTTATGTGAGGCTGCTG
AAGTAGTTTCTCCTATCTAGATGCTTCCTGATGCAGTTGAGAGAATGGATGTGATATCTTCACTTGTTCTACTCGTGCTG
AAGAAGAAACTTTTGTCATGCTTTAGTGGTTCCATTGTGAGACTATTTTTTACTGGTTTAATGAGTACCTTGCGGAATCA
ATCAATGTTATTATGGCAGCTAGAATATCATATGTTGAGTTTTGTCATTGATGTTTTGAGCGATTCTTATGTATTGTTAG
TCGCTGCATTTGCTTTGCTGTCTTGTTGCTTAGGGCAGTTGATTGCCGCTGGATTATTTCATCACTAGATACATTGAATT
CAGTTATCATGAAGAAAAATGCCTTATTTGATCTTAACCAAATTGAAAATTCAGTTATCAAATTGAATTGCAAAATCATC
TTATATTTAGATACGGAGGAAGT--AATGTAAAAGAATTCAGACATGGATTC---------AGAATGACTGGACTGTAGA
TTGTACCATTTTTCTTCATCCTT----GACAGCCATTTTGCATTTGAAGTTAGGTCTGCCCAATTTTCTGAAAGACTTGA
ATTTTGCTCCGTCTTGACCTGCTATTGTTTGAAAATTTGTCTGTCT
>chr6A_743
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------------------------------TTTTTATTAAAACCATCCACTACTTCAGCCCAACATGTGCGGTGCAGCCC
ATTTAGTAATCTCCCAAAGGGCCTGATTCTGACGATCCTTGACGGCCCAATACACTCATACCACTGAATAAACCACCAAA
CCCTAACCCCCATCCACCCCAGACAGTATATAATCTCAACACAAGCGCGCCGCTCAAACCCTAGCATCTCCAACTCCAGC
CGCCGCCACA-----CCCACAGCCAATCCTCCCCAGCCCAAGCTCGCAGCCATGCCTCCCAAGCTCGACCCGTCCCAGAT
CGTGGAGGTGTATGTCCGCGTCACCGGCGGGGAGGTCGGCGCTGCGTCGTCCCTGGCCCCCAAGATCGGTCCGCTCGGTC
TCTCCCCAAAGAAGATCGGAGAAGACATCGCCAAGGAGACGGCCAAGGACTGGAAGGGCCTCCGCGTCACCGTCAAGCTC
ACCGTCCAGAATCGCCAGGCCAAGGTGTCCGTCGTCCCCTCCGCCGCAGCCCTCGTCATCAAGGCGCTCAAGGAGCCCGA
GAGGGACCGCAAGAAGGTCAAGAACATCAAGCACAACGGCAACATCAGCCTCGACGACGTCATCGAGATCGCCAAGATCA
TGAAGGTCCGCTCCATGGCCAAGGAGATGGCCGGCACCGTCAAGGAGATCCTCGGCACCTGCGTCAGCGTCGGCTGCACC
GTCGACGGCAAGGACCCCAAGGATCTGCAGACGGAGATCGACGACGGCGAGGTGGAGATCCCCGCTTAAGAAGGTAACGA
CCAGATTCTTGTTTGGCGGTAATCATTTGTTGCTTTGCTGGTACCAGAAATGCTGTTGTGGTCTGCTAACTTGTTAGGA-
-AGAGTGGCGTGTAATAGCAGGTCATATGGACTTGAATTTTGACAATTAAAGCTAGGTAGAATGTGGTAAGATTGTCTGT
TGATTCAGTGCTCATGCTAGTAACTATAGATGATTTTAAGTAGATTCCTTGAC---TGAACTTGTATTGTTAGGATGAAT
GTTGCTCATGCTAGTCCATTTTATTCTTGTATCTGATCACACTGTATTCTTCGCTATGAATTTAACATTCAGTAATTAAA
CTGCGTACGAATCCATTGTAACAGCTTTATGTTTAATCATGCAGGCTTGGCTTTGGGGAGGTTGTTATGTGAGGCTGCTG
AAGTAGTTTCTCCTATCTAGATGCTTCCTGATGCAGTTGAGAGAATGGATGTGATGTCTTCACTTGTTCTACTCTTGCGG
AAGAAGAAACTTTTGTCATGCTTTAGTGGTTCCATTGTGAGACTAT-TTTTACTGCTTTAATGAGTACCTTCCGGAATCA
ATCAATGTTATTATGGCAGCTAGAATATCATATGTTGAGTTTTGTCAATGATGTTTTGAGCGTTTCTTATATATTGTTAG
TTGCTGCATTTGCTTTGCTGTCTTGTCTCTTAAAGCAGTTGATTGCAGCTGGGTTATTTCATCATTAGGTCCATTGAATT
CAGTTATCTTAATGAGAATTGCATTATTTGATCTGAACCAAATTGAAAATTTGGTTGTCAAATTGAACTGCAAAAACGAC
TTATGTTTAGATATGGAG-AGTATAAATGAGAAAGAGTTCAGATATGGATTCTACATTGATAGAATGACAGAACTGTAGA
TTGTACTATCTTTCTTTTGCATCCTTCGACAGTCATTTTGCATTTGGAATTAGGTCGGCCCAATTTTCTGAAAGACTTGA
ATTTTGCTCCGTC-----CTGCTATTGTTTGAAAATTTGTCGGTCT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS---S--------------------------S-------S-------S-SSSSSSSSSSSSSS
S------S-S--------SS--SS-S---SSSSS-------S-S--------S-----S-----S-S----S----S---
------S-S--SSSSSSSSSS--S--S-----SS------SS-S---------SSS---------S--SS----------
---------SSSS----S----------SS-SSSSS-SSSSSSSSSS-------S-------S-------SS--------
-----S--S-----------S--S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-------
----------S--------SSS-S--------S---------S----------------------S--------------
------------------------S-S----------------------------S-----------S------------
----------------------------------------------S---S-----------------------------
------------------S----------------S--------------------------------------------
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--S-----------------------------------------------------------------------------
---S-----------------------------------------------------S---------------------S
------------------------S----S----S------S-------------------------S------------
----------S--S----------------S-------S---------S-------------------------------
------------------------S--------------------------S----------------------------
S----S-S------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------S------------------------------------------------------
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-------------------------------S----------------------S-S-----S-------------S---
--S-----S---------S-----S----S---S----------------------------------------------
-------S-----------------------------------------------S------------------------
---------S--------------S---------------------
>forward_149
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-------------------------------------------------CTATTCGGCGCCACATGTTG-----------
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>reverse_1600
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-------------------------------------------------------------------------------G
GAGAGTGGCGTGTAATAGCA------------------------------------------------------------
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