>input_sequence_78279
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----------------------------------------------------------------------------ATGG
GTAAGAGTTCCATGGTGATCTTTGAGCCAGAGGAGACCAAGCATTTGGTCTATCTAAAAGCTGCCCTCTACGAGACTCTC
AGGTTGTACCCATCAGCACCAATAGAGCGCAAGACAGTGGCTACCACTGATATCATGCCGAGTGGCCATGAGGTGCACAC
CGGCGATACCATCCTTATTTCTCTCTACTCCATGGCGAGAATGGAGGGCGTGTGGGGTAAAGACTGTCGCGACTATAACC
CACATAGGTGGCTCTCAGAGGATGGCAACAAGCTGGTGTATGTACCGTCCCACAAGTTCTTGTCCTTCAACTCAGGCCCA
AGGATGTGCCCTGGAAAGGACATCGCTGTTGTGCAGATGAAAACCGTTGTTGCGGCAGTGGTTTGGAACTTCGACATGGA
GGTGGTGGAAGGGCAGAGCATCCAGCCCAAGCTATCTTGTACACTACAAATGAAGAATGGGCTTATGATGATCCTGAAGA
AGCGAGAAATATAA------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G307700
CCGTTGTATTTGTCTTTCTTGCATTCCTCTACATGTACTCCAGGTCTAGTAGTCGATCACATGGCCAATCAGTGCTCCCC
GCAGACTGGCCAATAGTGCACATGTTGCCTGGAGTCATTGCCAACCTCCATAATGCACATGACTATTTCGCTGCTATCCT
TACTGAAGCAGGCCACAACTTCAGGCTACATATTCCCCAAAGGCACATATTTC---------TCACTTGTGACCCTGGGA
ACGTCCGGCACATCTTCACAACGAACCACGCAAACTTCCCCAAGGGCCTCGAGTTTGCAGCCATCTTCGACATAATGGAT
GGAGGCATCTTCACAGTCGACGGTGAGCCATGGCGACGGCAGCGTACAAAATTCCAGAGCGTGCTCAGCAGCCCAGGGTT
GGTTTCCAGTATGGCGGCATGCTGCCTCGACAAGGTAGAGAATGGCCTCCTCCCCTTTTTTACCCACATGGCAAGCACCA
ACACTCCATTTGACATGCAAGAAGTGATTTCGAGGTTTGTGTTTGACTTGGCTGCCACGCCTCTCTTCGGCGTGGACCCT
AGCCTCCTCTCTTCGGAC------------ATGCCGTCCATGGATGTTGCAGTTGCCATGGACACGGTCATGGAGGTAGG
CTTTTTTCGGCACGTCATGCCGGTCTCTTGTTGGAAAGCTATGAGGAGGCTAAATATCGACCCGGAGAGAAAGCTTGATG
AGGCGCACAAGGTGATACGAGGCTTTTTCATGGAGATGATCGAGAAGAAAAAGATCAAT---------------GGAACA
TGTGTTTGTATTAACGGGGAGAAAGAGCGTGTGGATGTTCTGTCCTCCTACATCAATGACCCAGACTACGCAGACGATGA
CTTGCTCCGTGCGAAGCTCCTTAGCCTCATGCTCGGTGGGAGGGACACAATTGGCACCACGAGTTGCCATGGATCTTCTA
TATCCTTGCCAAGAATCCTAACATCGTTTCAATCATACACAATGAACTCTCACCCATTGCATCACACAAAGTAGCCATGG
GTAAGAGTTCCATGGTGATCTTTGAGCCAGAGGAGACCAAGCATTTGGTCTATCTAAAAGCTGCCCTCTACGAGACTCTC
AGGTTGTACCCATCAGCACCAATAGAGCGCAAGACAGTGGCTACCACTGATATCATGCCGAGTGGCCATGAGGTGCACAC
CGGCGATACCATCCTTATTTCTCTCTACTCCATGGCGAGAATGGAGGGCGTGTGGGGTAAAGACTGTCGCGACTATAACC
CACATAGGTGGCTCTCAGAGGATGGCAACAAGCTGGTGTATGTACCGTCCCACAAGTTCTTGTCCTTCAACTCAGGCCCA
AGGATGTGCCCTGGAAAGGACATCGCTGTTGTGCAGATGAAAACCGTTGTTGCGGCAGTGGTTTGGAACTTCGACATGGA
GGTGGTGGAAGGGCAGAGCATCCAGCCCAAGCTATCTTGTACACTACAAATGAAGAATGGGCTTATGATGATCCTGAAGA
AGCGAGAAATATAAAAGTAGACTCT--GTTTATAAATTGCATATGAATAACGCATCCATCATGGATGCTTTATTACAGAC
CATTAAGTTATATGTTTGGTTATGTTTGACACTTTGCTTGGAAGTTATTATATTCCTCATGTGCATGAAATGTGTTATAT
ATTTGTAAAAAAGGGTTCTTGACCACGTGAGATGTTTGTAAAATCTCTAGTATATATGAGGCATCCAAATATTATACATC
GATGCATACTCTGGGTCATGTACTTCATCCTTTCTCCGTTGGGTCTCGTTGCCACAATGCTGCACTATTGTTTGCAGATG
TGAGGGTACAATTCAGAAAGAAAAGAACC-TTTTTCAAGTATTTTGTTAAAAATGTTGTTCTTATTCGCTTACCAATCTT
CTTCGTTTGATTCCGCAAGGTATTATCTTTCTTCTTATTCTGGCAGTAGCTACAACATCCTGGTTCATCATAAGTTCTTC
CTTCACAAATGTCGCAACAAAAGATCAAGTTTAATTTACGTAGATGTGGATGCATATCACGCCAGCTGCCTACATGACTG
TTGGA-CAGTCCATCACCTACGCTGCCCTCGTCTTCCGTCCCGCTGCACGCCCACCCCAGGGCGTCGGAGCTTCTGTACG
TGATTTGGGATGTTGTGAAAGCAGGCCGTAGCTTCAACTCGCTGTGATCACCATAGTTCAAAAGTACTTAACAGTCACGA
ATAAGCTAATTCAAATGTTCAATGAATTTAAATATGATTTTTTTAGGCCA-------CCCATTCACGGGAAATGTACTTG
AATTTGTA------------------------------------------------------------------------
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---------------GTAACAGGCTTATCTAGTGC-AAACAAATATGCGCATCTAAGTATTCTTTAGATGATGATTCTTG
AAGTCAACATGTCCATGCATACATTTTGATCAGTTGGATTGTTCAGCCATTAAACGATGCAACTGTTATTTTCAAGAATG
CATTGCAGTTCAACTGTAAGGAAAGCGTATACGCAATTGTTCCTTTGTCTTCATTATATAAGACATGATATTT
>chr4B_1
CCGTTGTATTTGTCTTTCTTGCTTTCCTCTACTTGTACTTCAGGTCTAGCAGTAGATCACATGGCCAGTCAGTGCTCCCC
GCAGACTGGCCAGTAATGCACATGTTGCCTGGAGTCATTGCCAACCTCCATAATGCACATGACTATTTCGCTGCTATCCT
TACTGAAGCAGGCCACAACTTCAGGGTACATATTCCCCAAAGGCACATATTTC---------TCACTTGTGACCCTGGGA
ACGTCCGGCACATCTTCACAACCAACCACGCAAACTTCCCCAAGGGCCGCGAGTTTGCAGCCATCTTTGACATAATGGAT
GGAGGCATCTTCACAGTCGACGGTGAGCAATGGCGACGGCAGCGCACAAAATTCCAGAGCGTGCTCAGCAGCCCAGGGTT
GGTTTCCGGTATGGCGGCATGCTGCCGCGACAAGGTAGAGAATGGCCTCCTCCCCTTCTTTACCCACATGGCAAGCACTG
ACACTCCATTTGACATGCAAGAAGTGATTTCGAGGTTTGTGTTTGACTTGGCTGCCACGCCTCTCTTCGGCGTGGACCCT
AGCCTCCTGTCCTCGGAC------------ATGCCGTCCATGGACGTTGCAGTTGCCATGGACACGGTCATGGAGGTAGG
CTTTTTCCGGCATGTCATGCCAGCCACTTGTTGGAAAGCTATGAGGAGGCTAAACATCGGCCCAGAGAGAAAGCTTGATG
CGGCGCACAAGGTGATACGAGGGTTCTTCATGGAGATGATAGAGAAGAAAAAGATCAAT---------------GGAGGA
CGTGTTTGTAATGACGGGGAGCAAGAGCATGTGGATGTTCTGTCCTCCTACATCAATGACCCAGACTACGCAGACGATGA
CTTGCTCCGTGCGAAGCTCCTTAGCCTCATGCTCGGTGGGAGGGACACAATTGGCACCACC--TTGCCATGGATCTTCTA
TATCCTTGCCAAGAACCCTAACATCCTTTCAATCATACGCAATGAACTCTCACCCATTGCATCACACAAAGTAGCCATGG
GTAAGAGTTCCATGGTGATCTTTGAGCCAGAGGAGACCAAACATTTGGTCTATCTAAAAGCTGCCCTGTACGAGACTCTC
AGGTTGTACCCATCAGCACCAATTGAGCGCAAGACAGTGGCTACCGATGATATCATGCCGAGTGGCCATGAGGTGCACAC
CGGCGATACCATCCTTATTTCTCTCTACTCCATGGCGAGAATGGAGGGTGTGTGGGGTAAAGACTGTCGCGACTATAACC
CACATAGGTGGCTCTCAGAAGATGGTAACAAGTTGATGTATGTACCGTCTCACAAGTTCTTGTCCTTCAACTCAGGCCCA
AGGATGTGCCCTGGAAAGGACATCGCTGTTGTGCAGATGAAAACCGTTGTCGCGGCAGTGGTTTGGAACTTTGACATGGA
GGTGGTGGAAGGGCAGAGCATCCAGCCCAAGCTGTCTTGTACACTACAGATGAAAAATGGGCTCACGATGATCCTGAAGA
AGCGAGAAACATAAAAGTAGACTCTTTGTTTATAAATTTCATATGAATAACGCATCCATCATGGATGTTTTATTGCAGAA
CATGAAGTTATATGTTTGGTTATGTTTGACACTTCGCTTGGAAGTTATTATATTCCTCATGTGCATGAAATGTGTTATAT
ATTTGTAAAAAAAGGTTCTTGACCACGTGAGACATTTGTAAAACCTCTGGTATATATGAGGCATCCAAACATTATGCATC
GATGCATACTCTGGGTCGTGTACTTCATCCTTTCTCCATCGGGTCTCGTTGCCACAATGTTGCACTATTGTTTGCAGAGG
TGAGAGTGCAATTCAGAAGAAGAAAAACATTTTTTCAAGTATTTTATTAAAAATGTTGTTCTTATTCGCTTAGCAATCTT
CTTCCTTTGATTCTGCAAGGTATTATCTTTCTTCTTGTTCTGGCATAAGTTACAACATCCTGGTTCAACATAAGTTCTTC
C-------------------AAGATCAAGTTTAATTTAGGTAGATGTGTATGCATATCACGTCAGCTGCTTACACGACTG
CTGGATCAGTCCATCCCCTATGCTGCCCTCGTCTTCCGCCCCACTGCACGCCCACCCCAGGGCGTCGGAGCTTCTGTACA
TGATTTGGGATGTTGTGAAAGCCGGCTGTAGCTTCATCTTGTTGTGACCACCATAGTTCAAGAGTACTTAACAATCACGA
ATAAGCTATTTCAAGTATTCAACAAATTTAAATAAATAGGTTGATTTTAAGGGCCAGCCCATTCACGAGAAATGTACTTG
AATTTGTTTTTGTTTTGAAATGGAGGCATAAGATTTGCCTCATCAATTAGAGTTTTGAGTTTTACATAACACCCCACGCA
AATGGCATGGCAATTAATCACACAAAATTACAGTCCCAAGTTTCTTTGCGCCGGTAGTAACACATAACTTTGCTTCTTCA
AGAATGGATCTAAGGAGAACAGGCGTAGAGTAAAGTTTTCATGAAACACTCTAGCATTCCGCTCGTTCCAAATGGTCCAT
GAGATGAGCATGGTGAGAGAGGTCATGACATGCCAATTTGGGTTTTGGTTATCTATTCGTTTGTCCCACCACTCGTTGGC
GGATTCATCAAGATGCATGCCACTCTGAGGTGTTGACGTGAGGTAGCCCAAGCTTCTCGATGATAGATCTCTATAGCCTA
AGTGTGTACCGAGACTTGAAGAAGAGGTATGGACCCGTTTCTTGTTCTCTCTTGCATAGTTGGCAAAGGCCACAGTTTGC
TCATCCACGCCTCTCGAGCCAATCGGCGGTCCAAATACGGTCTTGTAGAGCTAACCAAGTAAAGAATTTAACCTTGGGGG
AGGGGGGAGCCTTCCAAACCATGCGCCATGGGTGAGAGAGTCAAACGAACGAATTGAGCCTTATACGCGGTGGCCGCTGA
GTACTTGAATTTTTTGTAACAGGCTTACCTAGTGCAAAACAAATATGTGCATCTAAGTATTCTTTAGA---TGATTCTTG
AAGTCAACATGTCCATGCATACATTTTGATCGGTTGGGTTGTTCAGCCATTAAACGATGCAACTGTTATTTTTAAGATTG
CATTGCAGTTCAATCGTAAGGAAAGCGTATACACAATTTTTCCTTTGTCTTCGTGAC--AAGACATGATATTT
>chr2B_34
---------------------------------TGTATCTCAGGGCTAGTTGTAGATCAAAGAACCCAGCCGTGCTTCCC
ACAAACTGGCCAATACTGCACATGTTCCCTTCCTTCATGGCCAACCTCCACAACCTCTATGACTATTTCACCCTGGTCCT
CGCAAGATCAGGCCACAACTTCAGGGCGCATGGACCACCTGGCACTGGGATGCGCTTCTTCATCACATGTGACCCTGCGA
ACGCCCGACACATCTTCACGACAAACCATGCCAACTTCCCCAAGGGCACGGAATTCGCCGATATCTTTGAAATCATGGGT
GGCAGCCTCTTCACCATCGACGGTGAGCCGTGCCGCCGACAACGTGCGAAAGCCAAGAGCATGCTCAGCAGCCCGCGGAT
CGTTGCCAGTATGGCAGCCTACCTCTGTGGCAAGGTGGAGAACAACCTCCTCCCATTGTTCACCCGCATGGCGATCACCG
GCACTTCATTCGACATGCAAGAATTGATGTCGAGGCTTATGTTTGACCTGGCTGCTACGCCTCTCTTCAGTGTGGATCCA
GGGCTCCTATCCTTGGAC------------ATGCCACCCATGGACGCAGCGGTTGCCCTTGACACGGTGATGGAGGTGGG
ATTTTTTAGGCTCATGATGCCAGCATCTTGTTGGAAGTCGATGAGGTGGCTAAATATCGGCCCTGAGAGAAAGCTTGACA
CGGCACGCATGGTGCTACGAGAGCTCGTCCAGGAGATGATGGAGAAGAGGAAGATCACCT---------------CATGT
CGTTTTGGACATGGCAAGGAACAAGAGAGTGTGGATATTATTTCTTCCTTCCTCGAAGACCCAGACTACGCTAATGTTGA
CTTGCTCCATGCGGTGATCATTAGCTACATGCTCGCTGCGAGGGACACAATTGCCACAACC--CTAACATGGATCTTCTA
CAACCTTGCCCAAAACCCTAACATCGTGTCAATCATCCGCAACGAACTTTCACCCATTGCATCACGCAAAGTAGCGGTAG
GCGTGTGTACCCCGGTGATCTTTGAGCCAGACGAGACCAAATCTCTAGTATATTTGACAGCCACCTTGTACGAGACTCTC
AGGCTGTACCCACCAGCGCCTGTCTTGCGCAAGACGGTGGCCGTAGATGACATCATGCCGAGTGGCCATGAGGTGCATGC
CGGTGACACCATTTTTATTTCTGTCCACTCCATGGGGAGAATGGAGGCTGTGTGGGGTAAAGACTGCCTCGACTATAACC
CACATAGGTGGCTCTCGGATGATGGCAACAACCTGCGATACATACCATCTCACAAGTTCTTGGCATTCAACTCAGGCCCG
AGAATGTGCCTCGGCAAGGACATTGCAATTATGCAAATGAAGACTGTCATTGCTACAACGGTGTGGAACTTCGATGTGAA
TCTGGTGGAAGGGCAGAGCATCCAGCCCAAGCCGTCCATTATACTGGAAATGGAAAACGGGCTCATTGTTAAGTTGAAGA
AGAGAGAAATATAA------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_42
-----------------------------------------AGGTATAGTAGTAGATCAAAGAACCCAACAATGCTTCCC
ACAAACTGGCCAATATTGCACATGTTACCTTCCTTCCTGGCCAACTCCCACAACTTGCATGACTATCTCTCCGTAGTGCT
TGCCGAATCAGGCCACAACTTCAAGGCGCATGGCCCGGTTGGGAGCGGGATGCGGTTGCTCATCACCTGCGACCCCGCGA
ATGTATGACACATCTTCACCACAAACTACACCAACTTCCCCAAGGGAGCAGAGTTTGCCGCCATCTTTGACATCATGGCC
GGTAGCCTCTTCACCATTGATGGTGCACCCTCTCTTCGGCCGCGCGCAAAAATCCAGAGCGTGCTTAGCAGCCCACGGTT
GGTTGCTAGTATGGCAACTTGCTGCCGTGACAAGGTGGAGAATGGCCTTCTACCATTATTTTCCCACCTGGCAAGCACCG
GCACTCCGTTCGACATGCAAGAAATGTTTTCCAGGTTTATGTTTGACTTGGCTGCCACACCTCTCTTTGGCGTGGACCCT
GGCCTCCTGTCCTTCTCCTTAGACATGTCGATGTCACCCATGGATGCCGCGGTCGCGATGGACACGGTCATGGAGGTGGG
ATTTATCCGACACTTAATTCCAGTCTCTTGCTGGAAGGCAATGAGGCGCCTAAACATCGGCTCCGAGAGGAAGCTTCGCA
CGGCGCACACGGTGCTAAGAAGATTTGCTGCAGAGATGATCGAGGAGAGGAGTAAGATAACTCTCAATAGGGGAAGATGT
GCATTGAGTAATGATGATGAACACGA------GGATATTCTATCTTCCTACATAAATGACCCAGACTACACAGACAATGA
CTTGCTCCATGCGGTGCTCCTCAGCTTCATGCTTGCTGGGCGGGACACGATTGGTACCACT--CTACCCTGGGTCTTCTA
CAACCTCGCCCAGAACCCTGGCATTGTATCAATTATCCACAGTCAACTCTCACCCATTGCATCGCGCAAAGTACCCGCGA
GTACGGGTGCCATGATGATCTTTGAACCAGAGGATACAAAACCTCTGGTCTATCTCAGAGCTGCGTTGTACGAGACTCTT
AGGTTGTACCCATCGGCACCTATTGAGCGCAACACAGTGGCTGCTGGTGATATCATGCCGAGTGGCCATGAGGTGAAGGT
CGGGGACACCATCCTTATATCTCTCCACTCCATGGGGAGAATGGAAGACCTATGGGGTAAAGACTGCCTTAACTATAACC
CGAATAGGTGGTTGTCAAAGGATGGCAACACCCTAAGGTACGTACCATCTCACAAGTTCTTGGCCTTCAACTCAGGCTCG
AGGATCTGCCCTGGCAAGGAGATTGCGGTTATGCAGATGAAGACCGTCGTTGCGACTGTGTTGTGGAACTTTGATGTTGA
GGTGGTGGAAGGGCAGATCATCCAGCCCAAGCCATCTTGTATACTACAGATGAAAAATGGATTTATAGTTAAACTGAGGA
AGCGAGAATTGTAA------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_42
-----------------------------------------AGGTATAGTAGTAGATCAAAGAACCCAACAATGCTTCCC
ACAAACTGGCCAATATTGCACATGTTACCTTCCTTCCTGGCCAACTCCCACAACTTGCATGACTATCTCTCCGTAGTGCT
TGCCGAATCAGGCCACAACTTCAAGGCGCATGGCCCGGTTGGGAGCGGGATGCGGTTGCTCATCACCTGCGACCCCGCGA
ATGTACGACACATCTTCACCACAAACTACACCAACTTCCCCAAGGGAGCAGAGTTTGCCGCCATCTTTGACATCATGGCT
GGTAGCCTCTTCACCATTGATGGTGCACCCTCTCTTCGGCCGCGCGCAAAAATCCAGAGCGTGCTTAGCAGCCCACGGTT
GGTTGCTAGTATGGCAACTTGCTTCCATGACAAGGTGGAGAATGGCCTTCTACCATTATTTTCCCACCTGGCAAGCACCG
GCACTCCGTTCGACATGCAAGAAATGTTTTCCAGGTTTATGTTTGACTTGGCTGCCACACCTCTCTTTGGCGTGGACCCT
GGCCTCCTGTCCTTCTCCTTAGACATGTCGATGCCACCCATGGATGCCGCGGTCGCGATGGACACGGTCATGGAGGTGGG
ATTTATCCGACACTTAATTCCAGCCTCTTGCTGGAAGGCAATGAGGCGCCTAAACATCGGCTCCGAGAGGAAGCTTTGCA
CGGCGCACACGGTGCTAAGAAGATTTGCTGCAGAGATGATCGAGGAGAGGAGTAAGATAACTCTCAATGGGGGAAGATGT
GCATTGAGTAATGATGATGAACACGA------GGATATTCTATCTTCCTACATAAATGACCCAGACTACACAGACAATGA
CTTGCTCCATGCGGTGCTCCTCAGCTTCATGCTTGCTGGGCGGGACACGATTGGTACCACT--CTACCCTGGGTCTTCTA
CAACCTCGCCCAGAACCCTGGCATTGTATCAATTATCCGCAGTCAACTCTCACCCATTGCATCGCGCAAAGTACCCGCGA
GTACGGGTGCCATGATGATCTTTGAACCAGAGGATACAATACCTCTGGTCTATCTCAGAGCTGCGTTGTACGAGACTCTT
AGGTTGTACCCATCGGCACCTATTGAGCGCAAGACAGTGGCTGCTGGTGATATCATGCCGAGTGGCCATGAGGTGAAGGT
CGGGGACACCATCCTTATATCTCTCCACTCCATGGGGAGAATGGAAGACCTATGGGGTAAAGACTGCCTTAACTATAACC
CGAATAGGTGGTTGTCAAAGGATGGCAACACCCTAAGGTACGTACCATCTCACGAGTTCTTGGCCTTCAACTCAGGCTCG
AGGATCTGCCCTGGCAAGGAGATTGCGGTTATGCAGATGAAGACCGTCGTTGCGACTGTGTTGTGGAACTTTGATGTCGA
GGTGGTGGAAGGGCAGATCATCCAGCCCAAGCCATCTTGTATACTACAGATGAAAAATGGATTTATAGTTAAACTAAGGA
AGCGAGAATTGTAA------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_42
-----------------------------------------AGGTATAGTAGTAGATCAAAGAACCCAACAATGCTTCCC
ACAAACTGGCCAATATTGCACATGTTACCTTCCTTCCTGGCCAACTCCCACAACTTGCATGACTATCTCTCCGTAGTGCT
TGCCGAATCAGGCCACAACTTCAAGGCGCATGGCCCGGTTGGGAGCGGGATGCGGTTGCTCATCACCTGCGACCCCGCGA
ATGTATGACACATCTTCACCACAAACTACACCAACTTCCCCAAGGGAGCAGAGTTTGCCGCCATCTTTGACATCATGGCT
GGTAGCCTCTTCACCATTGATGGTGCACCCTCTCTTCGGCCGCGCGCAAAAATCCAGAGCGTGCTTAGCAGCCCACGGTT
GGTTGCTAGTATGGCAACTTGCTGCCGTGACAAGGTGGAGAATGGACTTCTACCATTATTTTCCCACCTGGCAAGCACCG
GCACTCCGTTCGACATGCAAGAAATGTTTTCCAGGTTTATGTTTGACTTGGCTGCCACACCTCTCTTTGGCGTCGACCCT
GGCCTCCTGTCCTTCTCCTTAGACATGTCGATGCCACCCATGGATGCCGCGGTCGCGATGGACACGGTCATGGAGGTGGG
ATTTATCCGACACTTAATTCCAGTCTCTTGCTGGAAGGCAATGAGGCGCCTAAACATCGGCTCCGAGAGGAAGCTTCGCA
CGGCACACACGGTGCTAAGAAGATTTGCTGCAGAGATGATCGAGGAGAGGAGTAAGATAACTCTCAATAGGGGAAGATGT
GCATTGAGTAATGATGATGAACACGA------GGATATTCTATCTTCCTACATAAATGACCCAGACTACACAGACAATGA
CTTGCTCCATGCGGTGCTCCTCAGCTTCATGCTTGCTGGGCGGGACACGATTGGTACCACT--CTACCCTGGGTCTTCTA
CAACCTCGCCCAGAACCCTGGCATTGTATCAATTATCCACAGTCAACTCTCACCCATTGCATCGCGCAAAGTACCCGCGA
GTACGGGTGCCATGATGATCTTTGAACCAGAGGATACAAAACCTCTGGTCTATCTCAGAGTTGCGTTGTACGAGACTCTT
AGGTTGTACCCATCGGCACCTATTGAGCGCAAGACAGTGGCTGCTGGTGATATCATGCCGAGTGGCCATGAGGTGAAGGT
CGGGGACACCATCCTTATATCTCTCCACTCCATGGGGAGAATGGAAGACCTATGGGGTAAAGACTGCCTTAACTATAACC
CGAATAGGTGGTTGTCAAAGGATGGCAACACCCTAAGGTACGTACCATCTCACAAGTTCTTGGCCTTCAACTCAGGCTCG
AGGATCTGCCCTGGCAAGGAGATTGCGGTTATGCAGATGAAGACCGTCGTTGCGACTGTGTTGTGGAACTTTGATGTTGA
GGTGGTGGAAGGGCAGATCATCCAGCCCAAGCCATCTTGTATACTACAGATGAAAAATGGATTTATAGTTAAACTGAGGA
AGCGAGAATTGTAA------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr2A_211
TTCG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TCACATGCGACCCTGCCA
ACATCCGGCACATCTTCACGACCAACTACACCAACTTTCCCAAGGGTGCGGAGTTCGCCGCGATCTTCGACATCATGGGT
GGCAGCATCTTCACCATCGACGGTGAGCCAGCCCGTCGACAGCGTGCGAAAATCAAGGGCGTACTCAGCAGCCAGCGGTT
GCTTGCAAGGATGGAGGCTTGCTGCCGCGACAAGGTAGAGAACATCCTCCTCCCGTTGTTTGCGCACATGGCGAGCACCG
ACACTCCATTCAACATGCAAGAACTCATGTCAAGGTTTATGTTTGACATGGCTGCTACTCCTCTCTTCGATGTGGACCCT
GGTCTCCTATCTTGGGAC------------ATGCCGCCCATGGACGCTGCCGTTGCCATGGACACGGTCATGGAGGTGGC
CTTATTCCGAGTCATGATGCCAGCTTCTTGTTGGAGGTTGATCAGGTGGCTAAACATGGACCCTGAGAGGAAGCTCAAGG
CAGCACACACGGTGCTATGTGCCTTCGTCATGGAGATGATGGATAGGAGGAAGGTCAAC---------------ACATGT
CGTGTTGGCAATGACGAGGAACAAGAAGGTATAGATATTTTTTCTTCCTTCCTCAACGACCCCGATTATGACGATGATGA
CTTGCTCCGTGCGATGATCATTAGCTACATGCTCGCTGCCAGGGACACAGTTGGAGCAACA--TTGACATGGATTTTCTA
CAACCTTGCCCAACACCCTAAAATTGTGTCAATCATCCGCAAAGAACTCTCACCCATTGCATCACGTAAAGTAGCGGCCG
GTGTGGATTCCATGGTGATCTTCGAGCCGAATGAGACCAAATCTCTGGTCTATCTAAGAGCCGTCTTGTACGAGACTCTC
AGGTTGTACCCAGCGGCGCCTCTTGAGCGCAAGGTAGTCGCCGCTGATGATATCATGCCGAGTGGCCATGAGGTGCACAC
CGGCGACACCATCTTTATTTCTCTCCATTCCATGGGGAGAATGCAGGGCATATGGGGTAAAGATTGCCTGAACTACAATC
CAGATAGGTGGTTCTCGGAGGATGGCAACAAGCTAAGGTACATACCATCTCACAAGTTCTTGGCCTTCAACTCGGGCCCG
AGGATGTGCCTCGGGAAGGACATCGCGGTTATGCAGATGAAGACAGTCATCGCCTCAACATTGTGGAACTTCGATGTGGA
GGTGATGGAAGGGCAAAGCATCCAGCCTAAGCCGTCTTGTATACTGGAGATGAAAAATGGGCTTATGGTTAAGCTGAAAA
AGCGAGAAATGTAACATTAGACTCT-------------------------------------------------------
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-------------------------------------------------------------------------
>chr5D_211
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTCATCACCTGCGACCCTGCCA
ACATCCAGCACATCTTCACGACCAACTACTCCAACTTCCCCAAGGGCGCCGAATTCGCCGCCATATTCGACATCATGGCT
GGTGGCTTCTTCACCATCGATGGCGAGCTGTGGCGCTTGCGCCGCATGAAGTTCGTGGGCGTGATCAGCAGCCCACGGTT
TGCTGACCGTGTGGCAGCTCATTGCCATGACAAGGTGAAGGACCACCTCCTCCCGTTGCTTGCCCGCATGGCGAGCACCA
GCACTTCGTTCGACATGCAAGAAGTAATGGCGAGGTTAATGTTTGACATCACCGCCATGACAGTCTTTGGCGTTGACCCT
GGCTTCCTGTCCTTGGAC------------ATGCCTCCGATTGACGCCTCCCTTGCCATGGACACGGTCATGGAGGTGGG
ATTTCTCCGACACACCATGCCGGCCTCTTTGTGGAAGACATTGAGGTGGCTAAATATTGGTCCCGAGAGAAGGCTCCACG
AAGCGAACAGAGTGCTCCGCAGGTTTGTCGTGGATACGATGGAGAGGAGGAAGAACAAC---------------AGAGGC
CAAGATGAGGATGAAGAGGTTGTGGG------GGATATTTTATCTCTCTACATCAATGACCCAGACTACGCTGACGATGA
CTTGCTCTGTGGGACACTCATTAGCTTCATGCTCGCTGGGAGGGACACAATCGGCACGACC--CTGCCATGGATATTCTA
CAGCCTCGCCCAGAACCCTAACGTTGTGTCAATCATCCGCAATGAACTCTCACCTATTCTATCGCACAAAGTAGCCCGCG
GCATGGGTGCCACGGTCATCTTTGAGCCGGAGGAGACCAAATCTCTGGTCTATCTAAGAGCCACCTTGTACGAGACTCTC
AGGCTATACCCACCAGCGCATATGGAGCGCAAGACGGTGGTTGCCGATGATACCATGCCAAGTGGCCATGAGGTGTATGC
CGGTGATGCCATCTACATCTCTCTCTACTCCATGGGAAGAATGGAGAGCTTGTGGGGTAAAGACTGCCTCGACTTTAACC
CAGACAGATGGCTCCTGGGGGATAGCAACAAGCTCAAGTATGTGCCGTCTAACAAGTTCTTGGCCTTCAACTCAGGCCCA
AGGATGTGCCCAGGCAAGGAAATCGCAGTTGTGCAGATGAAGACCATCATCGCCGCAGTCGTGTGGAACTTTGACCTGGA
GCTGGTGGAAGGCCAGAGCATCCAACCCAAGCTATCTTGTTTACTGCAGATGAAAAATGGGCTCATGATGAAGCTGAAGA
AACGAGAA------------------------------------------------------------------------
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>chr5A_214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TCACCTGCGACCCCGCGA
ATGTATGACACATCTTCACCACAAACTACACCAACTTCCCCAAGGGAGAGCAGAG----------TTTGACATAATGGCT
GGCAGCCTCTTCACCATGGATGGTGCACCCTCTCTTCGGCCGCGCGCAAAAATCCAGAGCGTGCTTAGCAGCCCGCGGTT
GGTTGCTAGTATGGCAACTTGCTGCCGTGAAAAGGTGGAGAATGGCCTTCTACCATTATTTTCCCACCTTGCAAGCACCG
GCACTCCGTTCGACATGCAAGAAGTGTTTTCCAGGTTTATGTTTGACTTGGCTGCCACACCTCTCTTTGGCGTGGACCCT
GGCCTCCTGTCCTTCTCCTTAGACATGTCGATGCCACCCATGGATGCCGCGGTCGCGATGGACACGGTCATGGAGGTTTG
ATTTATCCCACACTTAATTTCAGCCTCTTGCTGGAAGGCAATGAGGCGCCTAAACATCGGCTCTGAGAGGAAGCTTCACA
CGGCGCACACGGTGCTAAGAAGATTTGCTGCAGAGATGATCGAGGAGAGGAGTAAGATAACTCT-AATGGGAGAAGATGT
GCATTGAGTAATGATGATGAACACGA------GGATATTCAATCTTCCTACATAAATGACCCAGACTACATAGACAATGA
CTTGCTCCATGCGGTGCTCCTCACCTTCATGCTTGCTGGGCGGGACACGATTGGTACCACT--CTACCCTGGGTCTTCTA
CAACCTCGCCCAGAACCCTGGCATTGTATCAATTATCCGCAGTCACCTCTCACCCATTGCATCGCACAAAGTACCCGCGA
GTACGGGTGCCATGATGATCTTTGAACCAGAGGATACAAAACCTCTGGTCTATCTCAGAGCTGCATTGTAAGAGACTCTT
AGGTTGTACCCATCGGCACCTATTGAGCGCAAGACAGTGGCTGCTGCTGATATCATGCCGAGTGGCCATGAGGTGAAGGC
CGGGGACACCATCCTTATTTCTCTCCACTCCATGGGGAGATTGGAAGACCTATGGGGTAAAGACTGCCTTGACTATAACC
TAAATAGGTGGTTGTCAAAGGATGGTAACACCCAGAGGTACGTACCATCTCACAAGTTCTTGGCCTTCAACTCAGGCTCG
AGGATCTGCCCTGGCAAGGAGATTGCGGTTATGCAGATGAAGACCATCGTTGCGACTGTGTTGTGGAACTTTGATGTCGA
GGTGGTGGAAGGGCAGATCATCCAGCCTAAGCCATCTTGTATACTACAGATGAAAAATGTATTTATAGTTAAACTGAGGA
AGCGAGAATTGTAA------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_222
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GACCCTGCAA
ACATCCGCCACATCTTCACGACAAACTACACCAACTTCCCCAAGGGCGCGGAGTTCGCTGCCATTTTCGACATCATGGGT
GACAGCCTCTTCAACGTCGACGGCGCACGAGCTCTTCGTCCACGAGTGAAGATCCATACTGTACTCAGCAGCCCGCGGTT
GGTTGCCAGTATGGAGGCTTGCTGCCGCGACAAGGTGGTGAACAACCTTCTCCCGTTGTTTTGCCACATGGCAAGCACCA
ACGCTCTATTTGACATGCAGGAACTAATGTCAAGGTTTATGTTTGACTTGGCCACTACGGCTCTATTTAGCGTGGACCCT
GGCCTTCTTTCCACAGAC------------ATGCCGCCCATGGACATCGCAGTTGCCATGGATACGGTCATGGAAGTAGG
CTTTTTTCGGCACATGATGCCAGCCTCTTGCTGGAAGGTGATGAGGTGGCTAAACATTGGGCCTGAGAGAAAGCTTGGTG
CAGCGCACACAGTACTACGAGTGTTCATCGCAAAGATGATCGAACGGAGGAACATCGAC---------------AAAGTA
CATGTTAGTAATGATGAGGAACAAGAGGGTGTGGATATTCTGTCTTCCTACATCAACGACCCAGACTTCGCCGACTACGA
CTTTCTCTGTGCGGGGCTCATTGGCCTCATGCTCGCTCTGCGGGACACGGTTCGCACGACC--CTGACATGGATCTTCTA
CAACCTCGCTCAGAACCCTGACATCGTGGCAACTATCCGTAATGAATTGTTACCAATTGCATTACAAAAAGCACCCACGG
GTGCGGGTGCCATGGTGATCTTTGAGCCAGAGGAGATCAAGTCTCTGGTCTATCTACGAGCCACCTTGTATGAGACTCTC
AGGCTCTACCCACCGGCGCCCTTGGAGCGCAAGACGGTGGCCACTGAGGATATCATGCCGAGTGGCCACAAGGTGCATGC
AGGTGACACAGTCTTTGTTTCCATCTATTCCATGGGAAGAATGAGGGACGTGTGGGGTGAGAATTGTCTGGACTATAACC
CACACAGATGGCTCTCAAAGGACGGCAACACGCTGAGGTACGTACCGTCTCACAAGTTCTTGTCCTTCAACTCAGGCCCG
AGGATATGCCCTGGCAAGGACATTGCGGTTATGCAAATGAAGATCATCATCGCCACAGTGTTGTGGAACTTCGATGTGGA
GGTATTAGAAGGGCAGAGCATCCGGCCCAAGTCGTCCTGTATACTGCAAATGGAAAATGGGCTCATTGTGAAGCTGAAGA
AGCGACAAGCATAACACTAGTCTGTTTAT---------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
----------------------S---------S------S-------------S--------------------------
---------------S----------------------------------------------------------------
-------------------------S------------------------------------------------------
----------------------S-------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------S------------------------------S----------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------------------------------------------------------------------------SS-
S---------S-S--------S----------------------------------------------------------
------------------------------------------------------------SSS-----------------
---------------S----------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------S---------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------S------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------S----------------------------S------S----S
---S------------------------------S---------------------------------------------
------------S-------------------SS---------S----S--------------------S-----S----
-----------------S-------------------S-S-------------------S------------------S-
----S--S----------SS-S--S---S----------------S--------------------------S-------
----S--------S----------------------S--------SS--S-----------------S------------
-SSSSSSSSSSSSSSSSSSS------------------S---------S------------S-------S----S-----
S--------------S----S-----------------S---S------------------------------------S
----------------------S---S---------S--S-S-----S-------------S-----------S------
--------S-----S-S-----SS----------SSSSSS--SSSSSSS------------------S------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-------------------S--------------------SSS---------
-------------------------------S-----S----------------------------------S----S--
-------------SS-----------------S-----S-------------S-S-SSS--------------
>forward_943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GACACAATTGGCACCACGAG-----------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>reverse_2062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------CCAGCTGCCTACATGACTG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
