>input_sequence_78277
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----------------------------------------ATGGTTTCACGTTCAGCCTCCCTCGCCCTCAAGGCGGCCG
CCGTCGCCGCCCTCATCGCCATGCTTTTCGTGCCTTCCTTTGGGCGCTGCGGATCGGCACCACCACCGCCACCGCCCACA
CCACCACCGCCAATGCCTACATCACCACCGCCGGCGCCGGCGCCGGCGCCGGGACCGATGCCGGCGATGACATGCGGCAA
CTGTGTTTCGCAGTGCTATCGGCCGTGCGTCGACGACATTCCCAAGAAATGCTTCGTGCCGTGCAAAAGAGACTGCGAGA
GGTGCCATACAAGTGCGATGGAGGATTGCATGTCCCGTAGCTGCAACGGCCCCTGTACAGAGGAGTACTGCAGGAGTAAC
TACAACTTCGAGGCCAGGTGCCGCAGTGAGTGCAGCAGCCGAAACTGCCGCGATTGCACGCTTTCATCTGAGTACAAGTG
TAGGTTCTCGTGCATCGACTACTGCAACGCGACCAACTGCATGAATCCATATCCATAA----------------------
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--------------------------
>chr4A_1_TraesCS4A01G031300
GTGTGATCATGCACAACATGCAGCTCACAAGCGACTGGAGGAAGATTTTGTTGAGTATCTGTGGGCGGTCAAGAGGGACA
ACAATATTGGAGTGTAATATTTAAACCTTTTAAATTAGAACAAACGCTGCATTTGAACATTTCAACTATATATATATGCG
GCTATTCAAACATGCGGACTTTAAAAAAAATTGGTCGATGTATGCGGGCAGCGTGGGATGGCGGCCTTCGGCATCAATGT
CCGCCAACTAGTCCCCTCCTATTCACGAACGGACGCCGGAGCAAATTTACGAGTCAGCGTTGGAGATGCCCTAACACAAG
ATAAAAGTCAACATATATTATTTATAGCTTTCAAGTCAACTTCTAACATGCATGTACCCGCAAAAAAGAAAAAAAAACTT
CTAACATGCATGGGTGGCGTAGATCTCGGCCCTAACATGGTGCAATATTGTCATATTTAGCCATACAAAATGTTTTAATG
TTATATATACTTTTACTACTATTTAGGCACATTTTCAATAGAAATCATATGCAAAGTTGTGCACCGGAGCTTTCACACAC
AAAAAAGGTTGTGCATTGGAGACTCGAGAACTCAAAGATAGTACATTTTATTTCCACGATTGGGAGAGTACACACCCCGG
TGCTCTGCATCGTCTAAAATAAGGCTGTGAAGACTTAGTCAACACACGTTGGTGTAACTAATTTTACCCATCTAGATCTA
ACCCAGGATGGGAAGTCAACATCTCTTAAAGTCAACTTTTAACATGCATGGATGGAATAGATCTCGACTGTAACATGGTG
CAAGTTGCATAGATATAACACCTCACCCATCTTGATCCATGATTTTTTTACCTCCAGTGAGATTTCAGGATCGTATGTGC
ACTAGTTTAGTAATAATAGCTATGCAGGGTTCTTGGTGGAGTGCCTACAAGTAGCATCATTTGTAAGTCGTGACATTGTA
TCCCGTCGCCAGTTTGCTTGCTTGCCGTGTCCACACAACAATGGTTTCACGTTCAGCCTCCCTCGCCCTCAAGGCGGCCG
CCGTCGCCGCCCTCATCGCCATGCTTTTCGTGCCTTCCTTTGGGCGCTGCGGATCGGCACCACCACCGCCACCGCCCACA
CCACCACCGCCAATGCCTACATCACCACCGCCGGCGCCGGCGCCGGCGCCGGGACCGATGCCGGCGATGACATGCGGCAA
CTGTGTTTCGCAGTGCTATCGGCCGTGCGTCGACGACATTCCCAAGAAATGCTTCGTGCCGTGCAAAAGAGACTGCGAGA
GGTGCCATACAAGTGCGATGGAGGATTGCATGTCCCGTAGCTGCAACGGCCCCTGTACAGAGGAGTACTGCAGGAGTAAC
TACAACTTCGAGGCCAGGTGCCGCAGTGAGTGCAGCAGCCGAAACTGCCGCGATTGCACGCTTTCATCTGAGTACAAGTG
TAGGTTCTCGTGCATCGACTACTGCAACGCGACCAACTGCATGAATCCATATCCATAAAAAGTAGGCGAGCCAGCTAGCC
GAGCATGTGTCGCATCCCATGGTCGATCATGTCAGCTTGTCCGTGCATCTAAATATGCATGTGGTAGGCACGGAGTAATA
TGGAAGTCGTCGGAGTGTCACGTGTATCTTGTTGCGATTAATTCAACTTATTAGAGTTTACGACAAGAGTTTCCACCCAC
GGTTTCGCCATTTCTAACTTGTTTGTCTATGTAGATGAAGTTGTACAGAACACGTTAATGTAGATCTACCTTGTTTTCAT
TGGATAGATACATAAAAGCATCTACAACCAAACCCTTT-AAATCCGTCTTAAACACCCGTACAGGCAGCCCGGTCATAAA
ATTTGGACTCAGACGGGCCCCTCAGACGGCCATCAAA-CACCCGGACTGACCGATACCCC-CCATATCTAGCCTAAATAT
GGGGCGGATATG---------------C-----ACACGCCCGCCACGTCGGACTCGGCCCATACTGGTCCACCCGACCGC
ACTTATATTCGTCCCCATCCTCTCG-TCGAAGC-AAACCCTAGCCACTTCA----------CTCCACTCCACTCCACTCC
CCTCT-----GCC----------ACCCCAGCTCACCTCCGGCAGTTTGCGGCTTTCTCCGCCAAGGCAAGCAGTGGATCG
GAGTCCAACTAGTCCGGATCCGTCGACTGGGATATCGTCCCGTGTGG-GTAGGAGGAGGCAAATGCAGTCCACATT-GCA
CTCTGCTGCTA-CAGGGAGGACAGCGCCCGGGCGACGGACAGATCCGTC----CGCCGAAACGCCATAGCGTC---GGCT
C-AC-CAAGCGTTCGGGTCCTCTGGTGCTGGATCCTCGCAGTCC---CG---TCCGGA---ACACCTCTCCTTCCCCATC
CCCGG-TC-GGGCAGAGT-ATGAGTCCCACCGGGAACGGGCGGCCCGCCGTTGGAAGGAGAGGATAAGGGTCGT------
----ATCGCGGCGGAA----ATGGCGGCGACGGAGGCGGCTGATGCGGCGGCGCGGGCGGCCGCAGAGGAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAACATCA
>chr2A_1777
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----------------AGCATCTACAACCGGACCCCTT-AAATCCGTCTCAAACGCCCGGGCAGGCTGTCCGGTCATGAT
TTTTTGACTCAGACAGGCCTCTCAAATGGCCCTCAAA-CGACCAGGCTAACCGGTACCCT-TCATATCTAGCCCAAATAT
GGGTCGCATATGGGGC----------CGCCCGGGCACACCCGCCACGTCGGTCCCGGCTCATGCTGGCCCACCCGACCCC
ACTTACATTCGTCCCCATCCTCTCG-TCGAAGC-AAACCCTAGTCATTCCA----------CTTCACTCCCCTCCACTCC
CCTCT-----ATC----------GCCCGAGCTCATCTCCGGCGGTTTGCGACCTTCTCCGCCATGGCAGGCAGCGGATCG
GACTTCGACCAGTCCGGATCCGTCGACTGGGGTATCGTCCCGTGTGG-GTTGGAGGTGGCAATGACAGTCCGCATT-GCA
CTCCGCCGCTC-TCGGGAGGACAGCGCCCGGCCGACGGACGGATCCGTC----TGCCGCGACACCATAGCATC---GGCT
C-AC-TGGGCGCTTGGGTCCTTTGGTGCTGGATCCTCGCGGTCC---TA---GCCGGA---ACACCTCTCCTTCTCCCTC
ACCGG-TC-GGGCAGAGT-ATGAGTCCCACCGGGAACGGGCGGCCCAGCGTGGGAAGGAGAGGATAAGGGGCGTTGAGGC
CCGTATCGCGGCGGAA----ATG---------------------GCGGCGGCGCGGGCGGCCGCAGAGGAGGAAGCCATC
TGCGCCCGTATTGTGAGGAAAC----
>chr5A_1777
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----------------AGCACCTACAGTCAAACCTCTCAAAATCCGCCTCATACACCTGGACAGGCTGCCCGGTCACGTT
TTTTCAACCGAGACAGACGCCTCAAACGGGCATCAAA-CGCTCTGTCTGACCGGCA--CC-CCATATCCAGCCCAAATAT
GGGG----------G-----------TGCCCGGGCACGCCCGTCACGTCGGACATGGCCCATGCTGACTCACCCAACCCC
ACTTATATTCGTCCCCATCCTCTCG-TAGGAGC-AAACCCTAGCCACTTCA----------CTCCACTCCC-TCCACTTT
CCTCC-----GCC----------ACCCGAACTTACCTCCGTTGGTTTCTGGCCTTCTCCGTCATGGCAGGCAGCGGATCA
GACTCCGACCAGTTCGGATCAGTCGACTGGGGTGTCGTCCCGTGTGG-GTTGGAGGAGTCAATGCCAGTCCGCATT-GCA
CTGCGCCGCTC-CCGGGAGGACAGCGCCCGGCCGACGGACAGATCCGTC----CGCCGTGACGCCATAGCGTC---GGCT
C-AC-TAGGCGCTCGGGTCCTCTGGTGCTGGATCCTCGCTGTCC---CGGC---TGAA---ACACCTCTCCTTCCCCATC
ATCGG-TC-GGGCAGAGT-ATGAGTCCTACCGGGAACGGGCGGCCCATCGTGGGGAGGAG--------------------
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>chr6D_1825
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-----------------------------------------------------------------CAGCCCGGTCATGAA
ATTTGGACCCAAAGGGCCC----------CCCTCAAA-CGCCCGGACTGACCGACACCCC-CCATATCCAGCCCAAATAT
GGGGGAATATGGAGG-----------CGCCCGGGCACGCCCGCCACGTCGGACCCGACCCATACTGGACCACCCTACCCC
ATTTATATTCGTCCCCATCCTCTCG-CCGGAGC-AAACCCTAGTCACTTCA----------CTCCACTCCCCTCCACTCC
CCTCC-----GCC----------ACCCGAGCTCACCTCCGGCGGTTCGCGGCCTTCTCCGCCATGGCAGGCAGCGGATCA
AACTCCGACCAATCCGGATCCGTCGACTGGGGTGTCCTACCATGTGG-GTTGGAGGAGGCAATGGCAGTCCACGTT-GCA
CTCCGCCGCTCAC-AGCAGGACAGCGCCCGGCCGACGGACGGATCCGTC----CACCGTGACGCCATAACGTC---AGCT
C-ACCCGGGCGCTCGGGTCCTCTGGTGCTAGATCCTCACGGTCC---CG---GCCGGA---ACACCTCTCCTTCCCCATC
ACCGG-TCGGGGCAGAGT-ATGAGTCCCACCGGGAACGGACGGCCCGCCGTGGGAAGGAGAGGATAAGGGCCGCCGAGGC
CCATGTCGAGGCGAAA----ATGGCGGCGGCGAAGGCGGCTGATGCGGCGGCGCTGGCGGCCGCAGAGGAGGAAGCCATC
CGTTCCCGCTTTGTGAAGAAAC----
>chrUn_1829
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---------------------------------------------------------------------CCGGTCACAAT
TTTTCGA-TCAGACGGACGCCTCAAACGGGCCTCAAAACACCCGGGCTGACCGGCACCCC-TCATATCCAGCCCAAATAT
GGGGCGGATATG---------------G-----GCGCGCATGTCACATTGGACCCGGCCCATGCTGGCCCACACGACCTC
ACATATATTCGTTCCGATCCGCTCG-ACGGAGC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
CCTCC-----GCC----------ACCCGAGCTCACCTCCGGCGGTTTTCGGCCTTCTCCGGCATGGCAGACAGCGAATCG
GACTCTGACCAGTCCGGATCCGTCGACTGGGGTGTCATCCTGTGT-GGGTTGAAGGAGGCAATGGCAGTCCGCATT-GCA
CTCCGCCGCTC-C-AGGAGGACAGCGCCCCGCCGACGGACGGATCCGTC----CGCCGCAATGCCATACCGTC---GGCT
C-AC-CGGGCGCTCGGGTCCTCTGGTGCTGGACCCTCACAGTCC---CGGTAGCCGGA---ACACCTCTCCTTCCCCATC
ACCGG-TG-GGGCAGACT-ATGAGTCTCATCGGGAACGGGCTGCCCGTCGTGGGATGGAGAGGATAAGGGCCGCCGAGAC
CCGTATCGCGGCGGAA----ATG---------------------GTGGCTGCGCGGGCGGCCGTAGAGGAGGAAGCCATC
CGCCCCTGCATTGTGAAGAAAC----
>chr2B_1829
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---------------------------------------------------------------------CCGGTCATGTT
TTTTCGACCCAGACGAAAGCCTCAAACGGGCCTCAAA-CGCAAGGGCTGACTGGCACCCC-CCATATCCAGTCCAAATAT
GGGGCGGATATGATG-----------CGCCCGGGCACGCCCACCACGTCGGACCCGGCTCATGCTGGCCCACCCGACCCC
ACTTATATTCGTCCCCATCCGCTCG-CCGAAGC-AAA----------TCCA----------CTCCACTCCCGTCCACTCC
CCTCT-----GCC----------ACGCGAGCTCACCTCCGGCAGATTCCGGCCTTGTCCGCCATGGCAGACAACGCACCG
AACTTCGACCAGTCTGGATCCGTCGACTGGGGTGTCATCCAGTGT-G-GTTGGAGGAGGCAATGGCAGTCCACATT-GCA
CTCCTCCGTTC-CTGAGAGGACAGCGCCCGACCGATGGACGGATCCGTC----CGCCGCGACGCCATATCATC---GGCT
C-AC-CTGGCGCTCGGATCCTCTGGT-CTGGATCCCCGCGGTCC---CGGTAGCCGAA---ACGCCTCTCCTTCCCCATC
ACTGG-CCGGG-TAGACT-ATGAGTCCCATCGGGAACGGGCGGCATGTCGTGGGAAGGAGAGGATAAGGGTTGCTGAGGG
TCGTATCACGACGGAA----ATGGCGGCGGCGGAGGCGGCTGATGCGGCGGCGCGGGCAGCCGCAGAGGAGGAAGCCATC
CGCGCCTGCATTATGAAGAAAC----
>chr3D_1829
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---------------------------------------------------------------------CCGGTCACGAT
TTTTCGACCCAGACAGCTCCCTCAAAAGGGCTTCAAA-CGCCTGGACTGACCGGCACCCC-TCATATCCAGCTCAAATAT
GGGGCGGATATG---------------GCCCGGGCACGCCCGTCACGTCGGACCCGGCCCATGCTGACCCACCCGATCCC
ATATATATTCGTCCCCGTCCGCTCG-CCGAACC-AAA----------CCCTAGCTCCTTCCCTTCACTCCCCTCCACACC
CCTCC-----GCC----------ACCCGAGCTCACCTCCGACGGTTTCCGGTCGTCTCTGGCATGGCAGGTAGCGGATCT
GACTCCGACCAGTCTGGATCCGTCGACTGGGGTGTCATCCCGTGCGG-GTTGGAGGGGGCAATAGTGGTCTGCATT-GCA
CTCCGCCGCTC-CCAGGAGGGCAGCGCCCGACCGGTGGACGGATCTGTC----CATCAAGACTCCGTAGCGTC---GGCT
C-AA-CGGGCGCTCTGGTCCTCTGGGGCTGGATCGTCGCGGTCC---CGGCAGCAGGA---ACCCCTCTCCTTCCTCATC
ACTGG-TCGGG-CAGACT-ATGAGTCCCACCGGGAACGGGCGGCCCGCCGTGGGAAGGAGAGCATAAGGGCTACCGAGGC
TCGTATCGCAGCGGAT----ATGGCGGCGGCG---------GATGCGGAGGTGCGGGTGGCCGTAGAGGAGGAAGCCATC
CACGCCCGCATTATGAAGAAAC----
>chr1D_1830
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----------------------------------------------------------------------CGGTCATATT
TTTTTGACCCAGACGAACGACTCAAACGGGCCTCAAA-TGCCCGGGCTGACCGGCA-CCC-CCATATCCAGCCCAAATAT
GGGGCAGATATGGGG-----------TGCCCGGGCACGCCCGCCACGTCGGACCCGGCCAATGCTAGCCCACCCGACTCC
ACTTATATTCGTCCCCATCCGCTCA-TCGGAGC-AAACCCTAGTCACTTCA--------------------CTCCACTCC
CCTCC-----ACTCCTCTCCGCCACCCGAGCTCACCTCCAGCGGTTTTCGGCCTTCTCCGCCATGGTAGGCAGCGGACCG
GGCTCCGACCAGTACGGATCCGTCGACTGGGGTGTCATCCCATGTGG-GTTGGAGGGGGCAATGGCAATCGGCGTT-GCA
CTCCGCCGCTC-CCGGGAGGACAGCGCCCGGCCGACGGAGAGATCCGTC----CGCTGCGACGCCATAGCGTT---GGCT
C-AC-CGTGCGCTCGGGTCCTCTAGTGCTGGATCCTCGCAGTCC---CGGCAGTCGGA---ACACCTCTCCTTCCCCATC
ACCGG-TCGGG-CAGACT-ATGAGTCCCACCGGGAACGGGCGGCCCGTCGTGGGAAGGAGAGGATAAGGGACGCCGAGGC
CCGTATCACGACGGAA----ATAGTGGCAGCGAAGGCGGCTGATGCGGCGGCGCGGACGGCCGCAAAGGAGGAAGCCATC
CGCGCCCGCATTGTGGAGAAA-----
>chr2D_1831
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-----------------------------------------------------------------------GGTCACGAA
ATTTCGATCCAGCCGGACACCTCAAACGGGCCTCAAA-CA-----GCTGACCGGCACCCC-TCATATCCAGCCCAAAAAT
GGGGCGTATATGGGA-----------CGCCCGAGTGCGCCCGTCATGTCGGTCCCGACCCAAACTGGTCCACCCGACCC-
ACATATATTCGTCCCCATCAGT--G-TCGGACG-AAACCATAGCCACTCCA--------------------CTCTCCTCT
TCACTCCACT----CCCTCAGCCACCCGAGCTCACCTCCGGTGATTTCCGACCGTCTCCAGCATGGCGGGCAACGGATCT
GACTCCGACTAACCCGAACCCGCCGATTGAGGTGTCATCCCGTGCGA-GTTGGAGGAGGCAATGGTGGTTCACATT-GCA
CTCCGCCGCTC-CCGGGTGGACAGCACCCAGCCGACGGACGGATCTGTC----CGGCGCGACACCATAGCGTC---AACT
C-AA-TGGGCGCTCGGGTCCTTTGGGGCTGGATCATCGTGGTCC---CGGCAACCGGA---AAATCTCTCCTTCCTCATC
ACCGGATCAGG-CAGACT-ATGAGTCCCACCGGGAACGAGCGGCCCGCCGTGGGAAGGAGAGGATAAGGGCCGCCGAGGC
CCGTATCGCGGCGGAA----ATGGTGGCGGCGGAGGCGGCTGATGCGGCGGCGCGGGTGGCCGCAGAGGAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAA-----
>chr4D_1841
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-TTTCGATTCAGACGGACGCCTCAAACGGGTCTCAAA-CGCCCGGGCTAACCAGCACCCC-CCATATCCAACCCAAATAT
TGGGCGGATATGAGG-----------CGCCCGGGCACGCCCGCCACGTCGGATCCGGTCCATGCTGGCCCACCGGACCCC
ACTTATATTCGTCATCATCCTCTTG-CCGGAGC--AACCCTAGCCACTTCA--------------------CTCCACTCC
ACTCT-----ACTCCCCTCCGTCACCCGAACTCACCTCCGGCGGTTTCCGACCTTCTCCGTCATGGCAGGCAGCGGATTG
GACTCCGACCAGTCCGGATCCGTCGATTGGGGTGTCATCCCGTGTGG-GTTGGAGGAGGCAATGGTAGTCTGCATT-GCA
CTCCGCT---C-CCGGGAGGACAGCGCCCGACCGACGAACGGATCCGTC----CGCCGCGTCGCCATAGCGTC---AGCT
C-AC-CCGACGCTCGGGTCCTCTGGTGCTGGATCCTCGTGGTCC---CGGC---CGGA---ACACATGTCCTTCCCCATC
ATCGG-TCGGG-CAGAGT-ATGAGTCCCACCGGGAACGGGCGACCCGCCATGGGAAGGAGAGGATAAGGGCCGCTGAGGC
CCGTATCGCGGTAGAA----ATGGCGGCGGCGGAGGCGGCTGATGCGGCGGCGCGGGCGGCCGCAGAGGAGGAAGCCATT
CGCGCCCACATTGTGAAGAAAC----
>chr3B_1841
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-TTTCGACCCAAACGAACGCCTCAAACGGGCCTCAAA-CGCCTAGGCTGACCGACACCCC-TCATATCCAACCCAAATAT
ATGG----------GCCGCTCGTGTACGCCCTGGCACGCCCGCCACATCGGACCCAGCCCATGTTTGTCCATCCGACCCC
ACATATATTCGTCCCCATCTGTTCG-CCGAAGC-AAACCCTAGCCACTTCA--------------------CTCCATACC
CCTCC-----GCT----------ACCCGAGCTCACCTCCGGCGGGTTCCGGCCTTCTTCGTCATGGCAGGCAGTGGATCG
GACTCCGACTAGTCTGGATCCGTCGACTAGGATGTCATCCCGTGTGG-GTTGGAGTATGCAATGGCAGTCCGCATT-GCA
CTCCGCCGCTC-CCGAGAGAACAACGCCCGGCCAAAAAACGGATCCGTC----CGCCGCCACGCCATAGTGTG---GGCT
C-AC-AGGATGCTCGGGTCCTCTGGTGCTGGATCCTCGCGGTCC---CGGCAGCCAGA---ACACCTTTCCTTCCCCACC
ACCGG-TTGGG-CAGACT-TTGAGTCCCACCGGGAACGGGTGGCCCGCCGTGGGAAGGAGAGGATAAGGGCTGCCGA-AC
CCGTATCGCAGCGAAA----TTGGTGGCGGCGGAGGCGGCTAATGCGGCGGCGCGGGCGACCGTAGAGGAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAAC----
>chr5B_1841
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-TTTCGACCTAGACGGACGCCTCAAACGAGCCTCAAA-CGCCCGGGCTAATCGGCA-CCC-CCATATCCAGCCCAAATAT
GGGATGGATATGGGG--------------------ACGCACGTCATGTCGGACTCGCCCCATATTGGCCCACCCGACCCC
ACTTATATCCGTCCTCATCCGCTCG-CCGGAGC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
CCTCT-----GCC----------ACCCGATGTAACCTCTAGTGGTTTCCGGCCTTCTCCGCCATGGCAGGCAGCGAATTG
GACTTCAATCAGTCGGGATCCGTCGACTGGGGTGTCATGCCGTGTGG-GTTGGAGGAGGCAATGGCAGTCCGCATT-ACA
CTCCGTCGCTC-TCGGGAGGTCAGCGCCCGGGCGACGGACGGATCCATC----CACCGCGACGCCATAGCATA---GGCT
C-AT-CGGGCACTCCGGTTCTCTAGTGCTGGATCCCCGCGGTCC---CTGTAGTCGGG---ACACCTCTCCTTCCCTATC
ACCGG-TCGTG-CAGACT-ATGAGTTCCACTGGGAACGGGCGACCGGCCGTGGAAAGGAGAGGATAAGGGTCGTTGAGAC
CCGTGTTGCGGCGGAA----ATGGCGGCGGCGGAGGCGGCTGATGTGGCAGGCGGGCA--CCACAGAGGAGGAAGCCATC
ACCGCCCGCATTGTGAAGAAA-----
>chr7D_1852
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------------ACGGACGCCTCAAACGGGCCTCAAA-CGCCCGGGCTGACCGGCACCCC-TCGTATCCAGCCCAAATAT
GGGCGAATATGGGGG-----------CGCCCGGGCACG-CCGCCACGTCGGACCCGGCCCATCCTGGCCCACCCGACCCC
ATATATATTCGTCCCCATCCGCTCG-CTGGAGC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
ACTCC-----CCTCCCCTCCGCCACCCGAGCTTGTCTCTAGCGAGTTCCGGCCGTCTCCGGCATGGCAGGCAGCGGATCA
GACTCCGACCACTCCGAATCCATCGACTGGGGTGTCATCCCGTGTGG-ATTGGAGGAGGCAATGGCAGTCCGCATT-GCA
CTCCGCTACTC-CCGGGAGGACAGGGCCCGGCCGACGGACAGATCCGTC----CGCCGCGACTCCATAGCGTC---GGCT
C-AC-CGGGTGCTCGGGTCCTCTGGTGCTGGATCCTCGCGGTCC---CGGC---CGGA---ACACCTCTCCTTCCCCATC
ACCGG-TTGGG-CCGAGT-ATGAGTCCCACCGGGACCGGGTGGCCCGCCGTGGGAAGGAGAGGAAAAGGGCCGCCGAGGC
CCGTATCGAGGCGAAA----ATGGCGGTGGCGGAGGCGGCTGATGCGGCGCCGCGGGCGGACGCAAAGGAGGAAGCCATC
CGCGCCCGCATTGTGAAGAAAC----
>chr7D_1852
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------------ACGGACGCCTCAAACGGGCCTCAAA-CGCCCGGGCTGACCGGCACCCC-TCGTATCCAGCCCAAATAT
GGGCGAATATGGGGG-----------CGCCCGGGCACG-CCGCCACGTCGGACCTGGCCCATGCTGGCCCACCCGACCCC
ATATATATTCGTCCCCATCCGCTCG-CTGGAGC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
ACTCC-----CCTCCCCTCCGCCACCCGAGCTTGTCTCTGGCGAGTTCCGGCCGTCTCTGGCATGGCAGGCAGCGGATCA
GACTCCGACCACTCCGAATCCATCGACTGGGGTGTCATCCCGTGTGG-ATTGGAGGAGGCAATGGCAGTCCGCATT-GCA
CTCCGCTACTC-CCGGGAGGACAGGGCCCGGCCGACGGACAGATCCGTC----CGCCGCGACTCCATAGCGTC---GGCT
C-AC-CGGGTGCTCGGGTCCTCTGGTGCTGGATCCTCGCAGTCC---CGGC---CGGA---ACACCTCTCCTTCCCCATC
ACCGG-TTGGG-CCGAGT-ATGAGTCCCACCGGGACCGGGTGGCCCGCCGTGGGAAGGAGAGGAAAAGGGCCGCCGAGGC
CCGTATCGAGGCGAAA----ATGGCGGTGGCGGAGGCGGCTAATGCCGCGGCGCGGGCGGACGCAAAGGAGGAAGCCATC
CGCGCCCACATTGTGAAGAAAC----
>chr7D_1854
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--------------GGGCCTCTCAAACGGCCCTCAAA-CGTCCAGCCTGACCGGCA-CCC-CCATATCCAGCCCAAATAT
GGGGCGGATATGGGGG----------CGCCCGGGCACGCCCGCGACGTCAGACCCGGCCCATGCTGGCCCACCCGACCCC
ACTTATATTCGTCTCCATCCGCTCG-CCAGACC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
CCTCC-----ACTCCCCTCCATCACCCGAGCTCACCTCCAGCGGCTTGTGACCTTCTCCACCATGGTAGGCAGCGGACCA
GACTCCGACCAGTCCGGATCCGTCGACTGGGGTGTCGTCCCGTGTGG-GTTGCAGGAGGCAATGGCAGGCCGCATT-GCA
CTCCGCCGCTC-CCGAAAGGACATCGCCCGGCCGACCGACGGATCCGTA----CATCGCGACGCCATAGAGTC---GACT
CAAC-CAGGCGCTCGGGTCCTCTGGTGCAGGATCCTCGCGGTCC---CAGC---CGGA---ACACCTCTCCTTTGCCATC
ACCGG-TTGGG-CAGAGAATTGAGTCCCACCGGGAACGGGCGGCCCGCCGTGGGAAGGAGATGATAAGGGTCACCGAGGC
CCGTATCA-------------------CGGCGGAGGCGGCTGATGTGGCGGCGCGGGCGGCCGCAGAGGAGGAAGCCATC
TGCGCCCGCATTGTGAAGAAAC----
>chr7A_1860
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--------------------CTCAAACGGGCCTCAAA-CGCCCAGGCTGATCAGCA-TCCACCATATACAGGCCAAATAT
GGGGCACA----------------------CGGGCACGCCTACCACGTCGAACCCGGACCATGCTGGCCCACCCGACCCT
ACTTATATTCGTCGCCATCCTCTCG-CCTGAGC-AAACCCTAGCCACTTCA--------------------CTCCACTCC
TCTCC-----GCC----------ACTCCAGCTCACCTCCGGCGGTTTCCGGCCTTCTCCGCCATGGCAGGCAGTGGATCA
GACTCCGACCAGTCAGGATCCGTCGATCTGGGTGTCATCCCGTGTGG-GTTGGAAGAGGCAATGGCAGTCCGCATT-GCA
CTCCGCCGCGGAC---AATGATAGTGCCCGGCAGGCAGACGGATCCGTCCGCGCGCCGCGACGCCTTAGCATC---GCCT
C-AC-CGGGCACTCGGGTCCTCTGGTGCTAAATCCTCGTTGTCCCGGCAGC---CGGA---ACACCTCTCCTTCCTCATC
ACCGG-CCGGG-CAGGCT-ATGAGTCCCACCGGTAACGGGTGGCCCGCTGTGGGAAGGAAAGGATAAGGGCCGCCGAGGC
CCGTATCGCGGCGAAA----ATGGCGGCGGTGGAGGCGGCTGATACGGCGGCGCAGGCGGCCGCACAGGA-GAAGCCATC
TGCACCCGCATTGTGAAGAAAC----
>chr1B_1872
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--------------------------------TCAAA-CACTCAGATTGACCGACACCTC-TTATATCTAACCTAAATAT
GGGGCGTT----------------------TGGGCGCGTTCACCACGTCGGATCAGGCCCAC-TTTGCCCACCCGACCCC
ACATATATTCCTCCTCATATGCTAGCC-GGATC-AACCCCTAGCCACTTCA--------------------CTCCACTCC
ACTCCTCTTCACTCCCCTCAGCCACCCAAGCTCACCTACAGCTGT----------CTTCGGCATGGCGGGCAGCAGATCT
GACCCCGACCAGTCCGGATCCGTCGACTGGTGTGTCATCCCGTGCGG-CTTGGAGGAGGCAATGTCCATCCGCAT-TGCA
CTCCGCCGCTC-CAAGGAGGACAGCGCCCGACCGACGACGGGATCTGTT----CGGCGCGACTCAATAGTGTC---GGCT
C-AA-CGGGCGCTTGGATC----GGGGTTGGATCATCGCGATCCCGGCGGC---AGCCTTCAGATTTCTCCTTCCCCATC
TTCGG-TCGGG-CGGAGT-ATGAGTCCCACCGGGACCGGAGTGCCCGTTGTGGGAATGAGAGGATAAGGGCCGCCGAGGC
CCGAGTCATTACAGACATGCATGGCCGCGGCAGAGGCGGCAGATGCAGCGGCGCGTGCGGGCGCAGAGGAGGAAACCCTT
CGCGCCCACATTTTGAAGAA------
>chrUn_1894
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-------------------------------------------------------ACCCC-TCATATCCGGCCTAAATAT
GGGGCGGATATAGGG-----------CGCCCGGGCACGCCTGTCACGTCGGATCCGGTCCATTCTGGCCCACCCGACCCC
ACATATATTCGTCCCCATCTGCTCG-C-GGAGC-AAACCCTAGCCACTTCA--------------------CTTCACTCC
CCTCC-----CCTCCCCTCCGCCACCCGAGCTTGTCTCCGGCAAGTTTCGCCCGTCTCCAGCATGGCAGGGAGCGGATCA
GACTCCGACCACTCCGGATCCATTGACTGGGGTGTCATCCCGTGCGG-GTTGGAGGAGGCAATGGCGATCCGCAT-TGCA
CTCCGCCGCTC-CCGGGAGGACT------GACCGACGGACGGATCCGTCT---TGCCGCTACGCCATAGCGTC---GGCT
C-AC-CGGGCGCTCGGGTCCTCTAGTGCGGGATCCTCGCGGTGC---CGGC---TGGA---ACACCTCTCCTGCCCCATC
ACCGG-CCGGG-TAGAGT-ATGAGTCCCACCGGGAATGGGCGGCCCGCCATGGGAAGGAGAGGATAAGGGCCACTGAGGC
ACGTATCAAGGTGGAA----ATGGCGGCGGTGGAGGCGGCTGATGCAGCAGGGCGGGCGGCCACAGAGGAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAA-----
>chrUn_1894
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-------------------------------------------------------ACCCC-TCATATCCGGCCTAAATAT
GGGGCGGATATAGGG-----------CGCCCGGGCACGCCTGTCACGTCGGATCCGGTCCATTCTGGCCCACCCGACCCC
ACATATATTCGTCCCCATCTGCTCG-C-GGAGC-AAACCCTAGCCACTTCA--------------------CTTCACTCC
CCTCC-----CCTCCCCTCCGCCACCCGAGCTTGTCTCCGGCAAGTTTCGCCCGTCTCCAGCATGGCAGGGAGCGGATCA
GACTCCGACCACTCCGGATCCATTGACCGGGGTGTCATCCCGTGCGG-GTTGGAGGAGGCAATGGCGATCCGCAT-TGCA
CTCCGCCGCTC-CCGGGAGGACT------GACCGACGGACGGATCCGTCT---TGCCGCTACGCCATAGCGTC---GGCT
C-AC-CGGGCGCTCGGGTCCTCTAGTGCGGGATCCTCGCGGTGC---CGGC---TGGA---ACACCTCTCCTGCCCCATC
ACCGG-CCGGG-TAGAGT-ATGAGTCCCACCGGGAATGGGCGGCCCGCCGTGGGAAGGAGAGGATAAGGGCCACTGAGGC
ACGTAACAAGGTGGAA----ATGGCGGCGGTGGAGGCGGCTGATGCAGCAGCGCGGGCGGCCACAGAGGAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAA-----
>chr4B_1932
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----------------------------------CACGCCCGCCATGTTGGACCCGGCCCATGCTGGCCCACCGA--CCC
ACTTATATTCGTACCTATCCTTTCGCC-GGAGC-AAACCCTAGCCACTACA--------------------CTCCACTCC
CTTC------ACTCCCCTCCGCCGCCCGAGCTCACCTCCGGCGGTTTGCGGCCTTCTCCGCCATGGCAGGCAGTGGATCG
GACTCCGACCAGTCCGGATCCGTCGACTGGGGTGTCGTCCCGTGTGG-GTTGGAGGAGGCAATGGCAGTCCGCATTTGCA
CTCCGCCGCTC-CCGGGAGGACAGCGCCCGGCCGACGGACTGATCCGTCCGC----CGTGATGCATTAGCGTC---GGGT
C-AC-GGGGCGCT-CGGTCCTCTGGTGCTGGATCCTCGCGGTCC---TTCC---CGGA---ACACCTCTCCTTCCCCATC
ACCAG-CCGGG-CAGAGT-ATGAGTCCCACCGGGAACGGGCGGTCTGCCATGGGAAGGAGAGGATAAGGGCCACCGAGGC
CCGTATCGCTGCGGAA----ATGGCGGCGGTGGAGGTGGCTGATGCGGCGGCGTGGGTGGCCATAGAGGAGGAAGCCATC
CGCACCCGCACTATGAAGAAAC----
>chrUn_1962
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----------------------------------------------------------------TGGTCCACCCGACCCT
ACATATATTCGTCCTCATTCGTTCGCC-GGAGCAAAACCCTAACCACTTCG--------------------CTCCACTCT
---------------CCTCCGCCACCCGAGCTCACCTCCGGCGGTTTCCATCCTTCTCCGACATGGCAGGCAGCAAATCG
GACTCCGACCAATCCGAATCCGTTGATTGGAGTGTCATTCCGTGCGG-GTTGGAGGAGGCAATGGCAGCCCGCATT-GTA
CTCCGCCGCTC-CCGGGAGGATAGCGCCCGGCCGACGGACGGATTTGTC----TGCCGCGACTCCATAGCGTCAGTGGCT
C-AC-CGGGCGCTCGGGTCCTCCAGGGCTGGATCCTCGCGGTCCCGGCAGC---CGGA---ATCCCTCTCCTTCCCCATC
ACCAG-TCGGG-CAAACT-ATGAATCCCACCGGGACCAGGCGGCCCACCGTGGAAAGGAGAGGATAAGGGCCGCCGAGGC
CCGTATCGCGGCGGAA----ATGGCGGCGGCGGAGGTGGCTGATGCGGCGGCGCGGGCGGTCGTAGAGAAGGAAGCCATC
CGCGCCTGCATTGTGAAGAAA-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------------S-------------S---------S--------------------
------------------------S-------------------------------------------------------
---------------------------S-----S--------------------------------------------S-
----------------------------------------------------------------------S---------
----------------------------------------------------S----------S----S-----------
--S-----------------------------------------------S-----------SS----------------
---S------S---------------------------------------------------------------------
-------S---S----------------------------------------S---------------------------
S--------------------------------------------------S----------------------------
-----------------------------S--------------------------------------------------
----------------------SSSS
>forward_293
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---------------------------------CGCCGGAGCAAATTTACGAG---------------------------
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--------------------------
>reverse_1189
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--------------------------------------------------------------------GACATGCGGCAA
CTGTGTTT------------------------------------------------------------------------
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--------------------------
>forward_1070
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----------CCTCATCGCCATGCTTTTCG--------------------------------------------------
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--------------------------
>reverse_2211
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--------------------------------------------------AGGAGGAGGCAAATGCAGTC----------
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--------------------------
