>input_sequence_78273
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-------------------------------ATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGTG---GGCATCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGCCCGGGCGGGATGCTGTTGCAGAAGCGCCGGGCGCCCGACGACGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGT
GAGAGTATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCAGCCTGTGGCCCAGAGAGCAGCGGCTGCTGTACCGTGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTACTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTC
CACCACCCTCGCGCAGCTCATGGGGGTGCCATGCCATTCCTTCATCCAAGTCTGA-------------------------
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>chr3D_1_TraesCS3D01G382800
GATCAAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCACTAGCATGATGACCGGGGTAGAGATCATGAAGG
TGGATCTCAATACCGTGTCGCCAAGGGAGAGGCCG-------------TGCAGGCTGATATGCTCAAGTTCGACGACGAG
TGATTT-ATGACGGCGAGTGCCATCC--TTTTTTGTATGCCGGCAGGTGTGCTGGC-ATGACCACGG-G-GCCGCGATGG
CGTGGTCGAACTCAAGTCCCACCCCTTT-T-TTGTGTGCTGGCATATGTGCCGGCCG-CTGGCGAGAGCGCCAGCATGAA
CTGTGTGGTGTTA--T--TTTGAAGCCGGCATTGTATGTCGGCGCTGGCACGATGCCGGCCTGAGACATG-GCCGCTAGC
ATGATCTATGA-CCGCAGG----C-CTTTTT--AAAAAATTATGTGCGAACATG-AAATGGGTCGGTGCGTTAGGCGCAC
TACCAACCCAAATGTAAAATAGGGCGGACGCTGGACGGGTGGTCGACCTAAATGGACAAAATCACTATTTGTTTGGGTCG
GCCGCCGTTGGAGTTGCTCTAAAGAAATGGGACGGAACGACAAAG----TAACTAACCTGCAGCCGGTGAGGCGATTCCG
TCGG-CCCC-GCCATTCATGCAG----ATGCA-----GAG------ACCG----CGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--CAGCCGTCTTGACAAAGAGCAGACAGGTGTCCCCTCACCCGCGGCGACTCAGCGTAT
ACAACACTCGATTAACTCTAATCTG-------------------------------TTCCTGCTATTCCTGCT-AAGCTT
CGCCTAGTCACCATC-CATATCTTAATTCTCCCTTTT------------CGCGCCCGCGC------------------AC
GGCTCTCG----TCCCTCTCTGTCGCCACTGCCG-------ACCCTGTCCTCA--------TCCTCGGCACCTTCTCCCC
CTTTAAAATCCCAACCATCT------C----TCCAACTCCATCAAGCCTCACGCACCACAACTCCAT-------------
------------------CCATCCATC----CAGTGATCATCCATCATCACGCGGC-----------------------A
GAGAAACAGAGAGAGCGCGGCAGAGGAGGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGTG---GGCATCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGCCCGGGCGGGATGCTGTTGCAGAAGCGCCGGGCGCCCGACGACGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGT
GAGAGTATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCAGCCTGTGGCCCAGAGAGCAGCGGCTGCTGTACCGTGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTACTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTC
CACCACCCTCGCGCAGCTCATGGGGGTGCCATGCCATTCCTTCATCCAAGTCTGAGAAACCC-ACGCATCCTCCTGATCG
ATCGATTTTTCTTTCTTTC----TCGCCGGCTGCTCTTGCTTGGGCGAAGATCGATCGGTTTCGGGTGTGTTAATTAAAA
GTC-TTAACTGCATTCCTTTCTTTCTTCAGAGTTTTATT---------GGTT-------TTAAC-TCAGAGCCTGGATTC
GGCCGGTTAAATCGAAACAT------------------------CTGCATCG---TTAGGACACACTTCCGTACAGAACA
GTACATATTGTAAATTACTGT--TG-----TAATTTGTA----TAAGGAGACAATGACAGCGACTGTGCTGTTTACCAAC
GTG-----------------------------------------------------------------------------
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-----------------------------------------------------------CACGTGTGT--GTGTCCATTC
TTTGTCCCTTGCTCCTTGTACAGTC---TTCTGATGGTGCATATACATTTATCCATGTATCCTTATGATAAAATTAGGGT
CGCTCCAACACCGTGCATCAAAACGCCCCTAAACATTCGGATAACTTAGTCCGAACACTCTTTGCTGTCTA-GCCCGTGG
ACCAGTCCGAATGTTTGAATTCCCCTAAAGCGAAAACTTGTGGGAGGTTTGGGGGAGTCCAGAGCCCGCCACGTTGGATT
CCGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATGATACATTGTGAAGCC
AGAATGCCGTAGGGCGTGGGCGTGGCGGGTGACGCCAGAGCGGATATCGCAAACTTCGCGTCGATAGCTACCATCCTAAA
ATTAGTCCAATAAATGCATATGGGGCAAAAAATCATTGAATTTAGTTGAGGAACTCTT
>chr3D_1
GATCAAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCTGTGGTTCGAGAAGATGCAGGCAGACATGCTCAAGTTCGTCGACGAG
TGATCTCGTGGCGGCGAGCGCCAT-CCTTTTTTTGTATGCCGGCAGGTGTGCTGGC-ATGACCACGG-G-GCCGCGATGG
CGTGGTCGAACTCAAGTCCCACCCCTTT-T-T-GTGTGCTGGCATGTGTGCCGGCCG-CTGGCGAGTGCGCCAGCATGAA
CTGTGTGGTGATCTTT--TTTGAAGCCGGCATTGTATGCTGGCGCTGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATCTATGG-CCGCGGG----C-CTTTTT--TAAAAATTGAGTGCGAACATG-AAATGGGCCGGCGCGTTGGGCGCAC
TGCCGACCCAAATCTAAAACAGGGCGGACGCCGGGCGGCCGACCAACCCAAACGGACAAATGCGCCGTCCGTTTGGGTCG
GC--CCGTTGGAGTTGCTCT------------------------------------------------------------
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>chr3D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTTGCGAGCATGATGACCAGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCCAGAAGATGCAGGCCGACATGCTCAAGTTCGCCGACGAG
TGATCT-ATGGCGGTGAGGGCCAT-A--TTTTTTGTATGCCGGCAGGTGTGCCGGC-ATGACCACGG-GAGCCGAGATGG
CGTGGTCGAACTCAAGTCCCACCTTTTT-T-T-GTGTGCTGGCATGTGTGCCGGCCGGCTGGCGAGTGCGCCAGCATGAA
C--TGTGGTGATATTT--TCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGATGCCGGCATGAGACATG-GCCGCTAGC
ATGATC---GG-CTGCGGGTCCTT-TTTATT--TAAAAGTTGAATGCGGGCATG-AAATGGGTCGGCGCGTTGGGCGCAC
TGCCGACCCAAATGCAAAACTGGCCGGACGCCGGGCGGGCAGCCGACCTAAACGGACAAATGCACCGTCCGTTTGGGTCG
GC--CCGTTGGAGTTGCTCT------------------------------------------------------------
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>chr6D_1
GATCGAGGCCGCCAATGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCATGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCAGTCCGACATACTCAAGTTTGACGACGAG
TGATCT-ATGGCGGCGAGCGCCAT-CCTTTTTTTGTATGCCGGCAGGTGTGCTGGC-ATGACCACGG-G-GCTGCGATGG
CGTGGTCGAACTCAAGTACCACCCCTTTAT-T-GTGTGCTAGCATGTGTGCTGGCTG-CTGGCGAGTGCGCCAGCATGAA
CTGTGTGGTGATATTT--TTTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGCCGGCATGAGACATG-GTC-CTGAC
ATGATCTATGG-CCGCGGG----C-CTTTTT--TAAAAATTGAGTGCGGACATG-AAATGGGTCGACGCGTTGGGTGCAC
TGCCGACCCAAATCTAAAACAGGGCGGACGCCGGGCGGGCGGCCGACCTAAACGGACAAAA-------------------
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>chr6D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAG
TGATAT-ATGGCGGCGAGGGCCAT-C--TTTTTTGTATGCCGGCAGGTGTGCCGGC-ATGACCACGG-GAGCCGCGATGG
CGTGGTCGAACTCAAGTCCCACCATTTT-G-T-GTGTGCTGGCAT-TGTGCCGGCCGGCTGGCGAGTGCGCCAGCATGAA
A--TGTGGTGATATTT--TCTGAAGCCGGCATTGTATGCCGGCGCTGACATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATC---GG-CCGTGGGCCTTT-TTTATT--TAAAAATTGAATGCGGACATG-AAATGAGTCGGCGCGTTGGGTGCAC
TGCCGACTCAAATGCAAAACTGGACGAACGCCGGGCGGACGGCTGACCCAAATGAACAAAA-------------------
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>chr5D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAATTGGCTCTCACGAGCATGATGACCGAGGTGAAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCGAGGAAGAGGCCGTGGTTCGAGAAGATGCAGGCCGACATGCTCAAGTTCGACGAC---
TGTTCT-ATGGCGGCGAGCGCCAT-C-TTTTTTTGTATGCCGACAGGTGTGCTGGC-ATGACCACGG-G-GCCGTGATGG
CGTGGTCGAACTCAAGTCCCACCCCTTT-TGT-GTGTGCTGGCATGTGTGCCGGCCG-CTGGTGGGTGCGCCGGCATGAA
CTGTG--TGGTGATAT--TTTGAAGCCGACATTGTATGCCGGCGCTGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATTGATGG-ACGCGGG----C-CCTTTT--TAAAAATTGCGTGCGGACATG-AAATGAGTCGGCGCGTTGGGCGCAC
AGCCGACCCAAATCTAAAACAGGGCGGACGCCGGGCGGGCGGCCGACCCAAACGGACAAAAGCGCCGTCCGTTTGGGTGG
GCT---GTTGAAGTTGCT--------------------------------------------------------------
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>chr2B_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAAAAGTGGCTCTCAGAAGCATGATGACCGGAGTGTAGATCATGAAGG
TGGATCTCAACACCGTGTCACCAAGGAAGAGGTTGTGGTTCGAGAAGATGCAAGCCGACATGCTCAAGTTCGACGACGAG
TGATCT-GTGGCGGAGAGCGCCAT-CCTTTTTTTGTATGCCGACAGGTGTGCTGGC-ATGACCACGG-G-GTCGGGATGG
CATGGTCGAACTCAAGTCCCACCCCTTT-T-T-GTGTGCTAGCATGTGTGCCGGCTG-CTGGCGAGTGCGCTAGCATGAA
CTATA--TGGTGTTAT--TTTGAAGCCGACATTGTATGTCGGTGCTGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATCTATGG-CCGCGTG----C-CTTTTT--TGAAAATTACGTGCGGACATG-AAATGGGTCGGTGCGTTGGGCGCAC
TGCCGACCCAAATCTAAAACAGGGCGGACGCCGGGCGGGCGGCCAACCCAAACGGACATAAA------------------
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>chr2D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAATACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCAGGCCGACATGCTCAAGTTCGACGGCGAG
TGATCT-ATGGCGGCGAGCGCCAT-C--TTTTTTGTATGCGGGCAGGTGTGCTGGC-ATGACCACGG-GAGCCGCGATGG
CGTGGTCGAACTCAAGTCCCACCCTTTT-T-T-GTGTGCTGACATGTGTGCCGGCTGGCTGGCGAGTGCGCTAGCATGAA
C--TGTGGTGATATTT--TCTGAAGCCGGCATTGTA-GCCGGCGCTGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATC---GG-CCGCGGA-CCTT-TTTTTT--AAAAAGTTGAGTGCGGACATG-AAATGGGTCGGCGCGTTGAATGCAC
TGCCGACCCAAATCTAAAAGGGTGCGGACGCCGG-CGGGCGGTCGACCCAAACGGACAAAA-------------------
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>chr6B_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCACGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCATGCCGACATGCTCAAGTTCGACGACAAG
TGATCT-ATGGCGGCGAGCGCCAT-C--TTTTTAGTATGCCGGCAGGTGTGCTGGC-GTGACCACGGTG-GCCGCGATGA
CGTGGTCGAACTCAAGTCCCACCCTTTT-T-TTGTGTGCTGGCATGTGTGCCGGCCGGCTGGCGAGTGCGCCAACATGAA
C--TGTGGTGATATTT--TTTGAAGCCGACATTGTATGCCGACGCTGGTATGGTGCCGACATGAGACATG-ACCGCCGGC
ATGATC---GG-CCGCGGG-CCTT-TTTTTAAAAAAAAATTGAGTGTGGACATG-AAATGGATCGACGCGTTGGGTGCAC
TGCCGACCCAAATCTAAA-CAGGGCGGACGCCGGGCGAACGGCCGACCCAAACAGACAAAA-------------------
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>chr4D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCAGGCCTACATGCTCAAGTTCGACGACGAG
TGATCT-ATGGCGGCGAGCGCCAT-C--TTTTTTGTATGCCGGCAGGTGTGCCGGT-ATGACCACTG-GAGCAGCGATGG
CGTGGTCGAACTCAACTCCCAT--CTTT-T-TTGTGTGCCGACATGTGTGCCGGCCGGCTGGCGAGTGCGCCAGCATGAA
C--TGTGGTGATATTT--TCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGCCGGCAGGAGACATG-GCCGCTGGC
ATGATC---GA-CCGCGGT-CCTT-TTCTTT--TTAAATTTAAATTCGGACATG-AAATGGGTCGGCGCGTTGGGCGCGC
TGCCGACCCAAATGCAAAACTGGGCGGACGCAGGGTGGGCGACCGACCCAAACGGGCAAAA-------------------
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>chr1D_1
GATCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGACCGGGCTAGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGCGGGTCGACATGCTCAAGTTCACCGACGAG
TGATCTCGTGGCCGCGAGCGCCTTCC--TTTTTTGTATGCCGACTTGTGTGCTGGC-ATGACCACGG-G-GCGGCGATGG
CTTGGTCGAACTCGAGTCCCACCCCTTT-T-C-GTGTGCTGGCATGTGTGCCGGCCG-CTGGCGAGTGCGCCAACGCGAA
CTGTGTGGTGATATTT--TTTGAGGCCGGCAATGTATGCCGGCGCTGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATC---GCGTCACATG----T-CTTTTT--TAAAATTTGAGTGCGGACATGAAAATGGGTCGGCGCGTTGGGCGGGC
GGCCGACCCAAATGCTAAACAGGGCGGACGCCGGGCGGGCGACCGACCCAAACGGACAAAA-------------------
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>chr7D_1
GATCAAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCACGAGCATGATGACCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTTGCCAAGGAAGAGGCCGTGGTTCGAGAAGATGTAGGCCGACATGCTCAAGTTTACCGACGAG
TGATCTCGTGGCCGCGAGCGCCTTCC--TTTTTTGTATGCCGGCTTGTGTGCTCGC-ATGACCACGG-G-GCCGCGATGG
CATGGTCGAACTCAAGTT-CACCCCTTT-T-T-GTGTGCTGGCATGTGTGCCGGCCG-CTGGCGAGTGCGCCAACGCGAA
CT-TGTGGTGATATTT--CTTGAAGCCGGTAATGTAGGCCGGCGCTGACATGGTGTCGGCATGAAATATG-GCCGCTAGC
ATGATCTATGCTCCACGGG----T-CTTTTT--TAAAAATTGAGTGCGGACATAAAAATAGATCGGTGCGTTGGGCAAGC
GGTCGACCCAAATGCAAAACAGGGCAGACACCGGGTGGGCGGGCGACCCAAACGAACAAATGTGCCGTCTGTTTGGGTCG
GC--CCGTTGAAGTTGCTCTAAA---------------------------------------------------------
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>chr5A_3
--TCGAGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGACTCTCGCGAGCATGATGAGCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCGTGTCGCCAAGGAAGAGGGCGTAGTTCGAGAAGATGCAGGTTGAC--------------CGACGAG
TGATCTCGTGGCCGCGAGCGCCTT-CCCTTTTTGGTTGACCGAC-TGTGTGCTGGC-ATGACCACGA-G-GCCACGATGG
CGTGGTCGAACTCAAGTCCCACCCCTTT-T-T-ATGTGCTGGCATGTGTGCCGGCCG-CTGGCGAGTGCACCAGCATGAA
C--TGTGTGGTGATATTTTTTGAAGCCGGCAATGTATGTCGGCGCTGGCATGGTGTCGGCGTGATCTACATGCCACTGGG
ACGATCTGTGG-CCGCAGG----CCTTTTTTTAAAA---TTGAGCACAAACATG-AAATGGGTTGGCGTGTTGGGCGCAC
TGCCGATCCAAATGCAAAACTGAACGAACACCGGGCGGGCGGGCAACCCAAACGAACAAAAT------------------
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>chr3B_6
-----AGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCAGGATGACCGGGATGGAGATCATGAAGG
TGGATCTGAACACCGTGTCGCCAAGGAAGAGGCCGCGGTTCGAGAAGATGCATGCCGACATGCTCAAGTTCGACGACGAG
TGATCT-ATGGCGGCGAGCGCCAT-CCTTTTTTCGTATGCCGGCAGGTGTGCTGGC-ATGACCACGG-G-GCCGCGATGG
CATGGTAAAACTCAAGTCCCACCCCTTT-T-T-GTGTGTTGGCATGTGTGCCGGCCG-CTGGCGAGTGCGCCAGCATAAA
C--TGTGTGGTGTTCT--TTTGAAGTCGGCATTGTATTTTGGCGCTGGCATGGTGCCAGCATGAGACATG-GCCGCTGGC
ATGATCTATGG-CCGCGGG----CCTTTTC----TAAAGTTATGTGCGGACATG-AAATAGGTCGGCGCGTTAGGCGCAC
TGTCGACCCAAATGTAAAACAGGACGGACGCCGGGCGGGCGGCCGACCCAAACAGACAAAA-------------------
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>chr5B_6
-----AGGCCGCCAACGCCAAGACCAAGGCGAAAGAAGTGGCTCTCGCGAGCATGATGATCGGGGTGGAGATCATGAAGG
TGGATCTCAACACCTTGTTGCCAAGGAAGAGACCGTGGTTCGAGAAAATGCAGGCCGACATGCTCAAGTTCGACGACGAG
TGATCT-ATGGCGGCGAGCGCCAT-CCTTTTTTTGTATGCCGGCAGGTGTGCTGGCAATGACCACGG-G-GCCGCGATGG
TGTGGTCAAACTCAAGTCCCACCCCTTT-T-TTGTGTGCTGGCATATGTGCCGGCCG-CTGGCGAGTGCGCCAACATGAA
C--TGTGGTGATATTT--TTTGAAGCTGTCATTGTATGCTGGCGATGGCATGGTGCCGGCATGAGACATG-GCCGCTGGC
ATGATCTATAA-CCGCGGG----CCTTTTTAAAAAAAAGTTGAGTGCGGACATG-AAATGGGTCGGCGCGTTGGGCGCAC
TGCTGACCCAAATCTAAAACTGGGCGGACGCCGGGCGGGCGGCTGACCCAAACGGACAAAA-------------------
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>chr7A_7
------GGCCGCCAACGCCAACACCAAGGCCAAAGAAGTGGCTCTCGTGAGCATGATGACC-GGGTGGAGATCATGAAGG
TGGATCTCAACACCATGTCGCCAAGGAAGAGGACGTGGTTCGAGAAGATGCAGGCCGACATGCTCAAGTTAGGCGATAAG
TGATCT-ATGGCGGCGAGCGTCATCC--TTTTTTGTATGCCGGCAGGTGTGCTGAC-ATGACCACGG-T-GCCGCTATGG
CGTGGTCGAACTCAAGTCCCACCCCTTT-T-T-GTGTGCTGGCATGTGTGCCAGCCG-CTGGCGAGTGCGCCAGCATGAA
C--TGTGTGTTGTTAT--TTTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGCCGGCATGAGACATG-CCCACTGGC
ATGATCTATGG-CCGCGGG----CCTTTTTTAAAAA---TTACGTGCAGACATG-AAATGGGTCGGTGCGTTGAGCGCAC
TGCCGACCCAAATCTAAAACAGGGCGGACGCCGGGCGGGCGGCCGACCCAAACGAACAAAAATGTCGTCCATTTGGGTCG
CC--CGGTTGGAGTTGCTCT------------------------------------------------------------
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>chr3D_544
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-------------------TAAAGAAATGGAACGAAACGGCAACAAAACAAACCAAACTGCAGCTGCTGAGAGGATTCCG
TGGG-CCCC-GCCGTTCATGCAGGCAGTTGCAGGGCGGAG------ACCG----CGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--TCGCCGTCGCAGC-AACAGCACACAGGTGTCGCCTCACCCGCGGCGACCCGGCGTGT
ACAATACTCGATTAACCCTGCT----------------------------------------CTATTCCCGCT-AAGCTT
CGCCTAGTCACCACC-CATATCTTAATTCAACCCTTTCGCTCCCGCGCCCGCGCCCGTGC------------------AC
GGCTCTCG----TC----TCTGTCGCGACTGCCG-------ACCTTGTCCTCA--------TCCCCAACGCCTTCTCCCC
CTTTAAAATCCCAACCATCT------C----TCCA------TTAAGCCTCACGCACCACAACACCCAGAGAGCAG-----
--------CT--AGCTATCCAT---------CATCGACCATCCATCATCACGCA-----CACACACACGAGGCAGGCAGA
GAGAAACAGAGGGCGCGC-GCAGAGGAGGAGATGGTGAAGATTCCCAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGA
GCAC---GGCG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGCCCGGGCGGGATGCTCGTGCAGAAGCGCCGGGGGCCGGACGACGACG---------CCGTGGTCGAGGCCATCCTGGT
GAAGGTCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTATACCGTGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTGCAGGACAAGGACAAGGTGCTGCTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTC
CACCACCCTCGCGCAGCTCATGGGTGTGCCCTGCCATTCCTTCATCCAAGTCTA-GCATAGAACCCAC------------
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>chr3A_544
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-------------------TAAAGAAATGGGACGGAACGACAAAG----CAACCAACCTGCAGCCGGTGATGCGATTCCG
TCGG-CCCC-GCCATTCATGCAG----ATGCA-----GAG------ACCGCGTTCGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--CGGCCGTCTTCGCAACAAGAAGACAGGTGTCCCCTCACCCGCGGCGACTCAGCTTAT
ACAACACTCGATTAACTCTAAT----------------------------------------CTGTTCCTGCT-AAGCTT
GGCCTAGTCACCACC-CATATCTTAATTCTCCCTTTT------------CGCGCCCGCGCCC------------GCGCAC
GGCTCTCG----TCCCTCCCTGTCGCCACTGCCG-------ACCTTGTCCTCA--------TCCTCGGCACCTTCTCCCC
CTTTAAAATCCCAACCATCT------CCCTCCCCA------TCAAGCCTCACGCACCACAACATCCA-------------
-------------------------TCGATCCAGCGATCATCCATCCTCACGCA-------CACACACGAGGCAGGCAGA
G------AGAGAGAGCT---AGGAGCA-GAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGCG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTGGTGCAGAAGCGCCGGGGGCCGGACGACGACG---------ACGTGGTCGAGGCCATCCTGGT
GAAGGTCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTCTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGGCTCTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCGGCCTTCACCGAGAGGAAGCTAAGGTC
CACCACCCTCGCGCAGCTCATGGGGGTGCCATGCCATTCGTTCATCCAAGTCT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAAAGAAATGGAGACGAACGACAACAAACCTAACCAATTTGCAGCCGGTGAGAGGATTCCG
TCGG-CCCC-GCCATTCATGCAG----ATGCA-----GAG------ACCG----CGTT-----------GCCACCTCCAC
ATGTGCTG-------CCGATC--TCGCCGTCTCAGC-AACAGCAGACAGGTGTCGCA----------CAACTCAGCGTAT
ACCACACCCGATTAGCGCTAAT----------------------------------------CTATTCCCGCT-AAGCTT
CGCCTAGTCAGCACC-CATATCTTAATTCTCCCTTTT------------CGCGCCCGCGCCC------------GCGCAC
GGCTCTCG----TCCCTCCCTGTCGCCACTGCCG-------ACCTTGTCCTCA--------TCCTCGGCACCTTCTTCCC
CTTTAAAATCCCAAGCATCT------C----TCCG------TCAAGCCTCACGCACCACAACATCCA-------------
-------------------------TCGATCCAGCGATCATCCAGCATCACGCA-------TACACACGAGGCAGGCAGA
GAGAAGCAGAGAGGACTCGGCAGAGGAGGAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GACC---GGCAGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTGGTGCAGAAGCGCCGGGGGCCGGACGACGACG---------CCGTGGTCGAGGCCATCCTGGT
GAAGGTCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGAACTCAAGGTGC
TGCTGTCGCTGGCCACCGGGCTCTGGCCCAGGGAGCAGCGGCTGCTGTACCGAGGCAGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACGGAGAGGAAGCTCCGGTC
CACCACCCTCGCGCAGCTCATGGGGGTGCCCTGCCATTCCTTCATCCAAGTCT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3D_560
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACAACAAAACTAACTAACCTGCAGCTGGTGGGACGATTCCT
TCGGCTCCA-GCCATCCATGCAG----ATGCAGGGCGGAG------ACCG----CGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--TCGTCGCCTCAGT-AACAGCAGACATCTGTCGCCTCACTCGCGGCGACTCAGCGTA-
ACAACGCTCCGTTAACGCTAAT----------------------------------------CTATTCCCGCT-AAGCTT
CGCCTAGTCACAACC-CAAATAT---------------------------------------------------------
------------------CCTGTCGCGACTGCCG-------ACCTTGTCCTCG--------TCCTCGACACCTTCTCCCC
CTTTAAAATCCCAAGCATCT------C----TCCT------TCAAGCCTCACGCAGCACAACACCCACAGAGCAGAC---
---------------------------------------------------------------------AGGCAGTGAGA
GAGAAGCAGAGAGAGCT---AGGAGCA-GAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGA
ACAC---AGTG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGCATCGAGTGGGAGGTG
CGGCCGGGCGGGATGCTGGTGCAGAAGCGCCGGGCGCCCCACGACGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGT
GCGGGTCTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACAGGGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCCAGAGGAAGCTCCGGTC
CACCTCCCTCGCGCAGCTCATGGGAGTGCCCTGCCATTCCTTCATCCAAGTCTAAGAAATCT-ACACATCCTCCTGATCG
ATCGATTTTTCTTTCTTTCTTTCTCGCCGGCTGCTCTTGCTTGGGCGAAGATCGATCGGTTTCAGGTGTGTTAATTAA--
GTGTCG-ACTGCATTCCTTTCTTTCTTCAGAGATTTCTTTTAGGTTTAGGTA-------TTAAC-TAAGAGCCTGGATTC
GGCCGGTTAAATCGAAACATATGTACTCTAGAAAATTGAAACATCTGCATCG---TTAGGACACAA-----TACAGTACA
GTACATATTGTAAATTGTATTACTG-----TAATTTGTG----CAAGGACACAATGAGAGTGACTGTGCTGTTTATAAAT
GTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAC--GTGTCTGTCTCCATTC
TTCGTCAATGGCTCCTTGTATAGTC---TTCTGATGGCGCATATACATTTATCAGCGTATCCTTACGATGAAATTAGGGC
CACCCCAACTCCGTGCATCAAAATACACAGCCAGT-----------------GAACACTCTTTGCATTAAATGCCCGCAG
ACCAGTCCAGACGTCTAAATTTCCACAAACCGAAAACTTGTGGGAGGTTTGGGGAGTCCAACCGCCCGCCACATTGGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_565
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CAAAGCTAACCAACCTGCAGCCGGTGAGAGGATTCCG
TCGG-CCCC-GCCATTCATGCAG----ATGCA-----GAGGGAGAGACCGTGCTCGTT-----------ACCACCTCCCC
ATGTGCCTGCTCCGTCCGATC--CCGTCGCATCACC-AACAGCAGACAGATGTCGCCT----------AACTC-GCGTAT
ACCACACTCGATTAACGCTAATCTATTCCTTTCTGTCAGAAAAAAACGCTAATCTATTCCTGCCATTCCTGCT-AAGCTT
CGCCTAGTCACCACA-CATATCTTAATTCTCCTTTTT------------CGCGCCAGCCC------------------AC
GGCTCTCGTCCCTCTCT----GTCGCGACTTCCA-------ACCGTGTCCTCGTCCTCGCCTCCTCGGCACCTGCTCCCC
CTATAAAATCCCAGGCGTCT------C----CCCG------TCAGGTCTCACGCAGCACAACACCGAGAGGCCAGAGAGC
AG-------CTTAGCTAGCCATCCATCGG-------------CATCGTTAGTTC-------ATCACACACGCGAGGCAGA
GAGGACAAGAGAGAGCGCGGAGGAGCA-AAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCAAGGA
GCAC---GCTG---GGCGGCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTGGTGCAGAAACGCCGGGGGCCGGAAAACGACGGCTGCGACGCAGAG---GAGGCCATCCTGGT
GAGGGTGTCCACCGCCGGCGGCGGGTGGCAGCACGACGTGCCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TTCTGTCGCTGGCCACCGGCCTCTGGCCGAGGGAACAGCGGCTACTGTACCGAGGCCGAGAGCGGGACGACGGTGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCGAGCGGAAGCTCCTGTC
CACCAGCCTCGCGCAGCTCATGGGGGTGCCCTGCCATTCCTTCATCCAAGTCTAAGAAACCC-ACGCCCCATCAGCTGTT
CTCGCTGTTTA-T---------------------------TTGGGCC-AA---GATCGGTTTGAGGTGCGTTAGTTAA--
GCGTTTAACTGCATTCTTTTCAATCTTTAGAGTTTTTTTTGGG----------------TTCAA-TCAGGGCTTGGATTT
GGCCGATTGAATCGAAAAAC------------------------GGGCAGCT---TTAGGATACAA-----TACACTACA
GTACATGTTGTAAAATA---T--TG-----TAATTTGTG----TAAGCAGACAATGACAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3B_568
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------AG----TAACTAACCTGCAGCTGGTGGGACGATTCCG
TCGG-TCCA-GCCATTCATGCAG----ATGCAGGGCGGAG------ACCG----CGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--TCGTCGCCTCAGC-AACAGCAGACATGTGTCGCCTCCCTCGCGGCGACTCAGCGTA-
ACAACGCTCCAGAAACGCTAAT----------------------------------------CTATTCCTGCTAAAGCTT
CGCCTAGTCACCA-----------------------------------------CCGCGCCC------------GCGCAC
GGCTCTCG----TCCCT----GTCGCGACTGCCTGAGCTTCACCTTGTCCTCA--------TCCTCGACACCTTCTCCCC
CTTTAAAATCCCAAGCATCT------C----TCCA------TCAAGCCTCACCCACCACTACACCCACAGAGCAGAGAGC
AG-------CT-AGCTATCTATCCATCGTGTGATCGATCATCCATCGTCCCGCACACTGCACACACAAGAC---------
-------------AGCGCGGCAGAGGAGGAGATGGTGAAGATTCCTAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGTG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTTGTGCAGAAGCGCCGGGCGCCGGACGACGACG---------ACGTGGTCGAGGCCATCCTGGT
GCGGGTGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGGTTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGAGACGACGGTGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTGCTCCTGGAGGACCCTGCCATGACCGAGAGGAAGCTCCGGTC
CACCACCCTCGCGCAGCTCATGGGGGTGCCCTGCCACTCCTTCATCCAAGTCTAAGAAAAGAAACACATCCTCCTGATCG
ATCGATTTTTCTTTCTTTC----TCGCCGGCTGCTCTTGCTTGGGCGAAGATCGATCGGTTTCC----------------
------------------TTCTTTCTTCAGAGTTTTATT---------GGTTTTAACTTTTAAC-ACAGAGCCTGGATTC
GGCCGGTTAAATCGAAACAT------------------------CTGCATCGTTATTAGGACACACTTTCGTACAGTACA
GCACATATTGTAAATTA---T--TATTTTATAATATGTA----TAAGGAGACAATGACAGTGGCTGTTTTGTTTATATGA
GAAAGCTAATTTCCTACCGGCAGGAATTTAGCGACAGACACGTACGATTCGTGCCTCGTCCGATTCCCATCGCGTGGTGC
ACCACCACAGTAACCAACTAATCCAGACTTTGTTGTTGTCAAAAGCACCAGACTATGAATGTATTGCGTAGTGGCTTTTT
GTTTAAGATTTAAATTGTGAACGACTTCCTAATTTGATAACGAATTTAGGGCTTCTTTGGATCACAGGATTAGAAAACAA
AGGAATTCAAAAAACACAGAAATTTGACGGGATTGTAGGTGCAAAACAGAGGATTACAAAATATAGGAAAACTAAAAGAA
TGGTCATTTGGATGGAACACAGGAAAAATACAGGAAAAATGCCTCGATCCTACGCGAATCAGTGTAAAAAAGAGGTTATA
GTGGATGTTGAAATTCCTATAGGATTGAGGTGTAGGAATGCATCCATAGGAATTTTGGAGGT--GTGG--TTCCTTTGAT
CCAAAGGGCTTCTTTAGGAAAAAATCCAATGAATTGGAATCCTTCAATATTTCTATGAAAATCCATCAATCCAAAGAGGC
CCTTAA--------------------------------------------------------------------------
------------------------------------------------TGGGAAGAATCCAGAGACTATGACATTGGCTG
CCGTGAATTTTTTTTTGAATTGGATCTGTCATTATTTTAGGTGCTAGATCTATTGGCACGCTCTGGTTATATTTTTAGTC
AAAAATAAAAATGATGCTGAATATGGGATTTGACACAGAGCCTGGATTCGGCCGGTTAAATCGAAACATCTGCATCGTTA
TTAGGACACACTTTCGTACAGTACAGCACATATTGTAAATTATTATTTTATAATATGTATAAGGAGACAATGAGAGTGGC
TGTTTTGTTTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3D_571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AACTAACCTGCAGCCGGTGAGGCGATTCCG
TCGG-TCCC-GCCATTCATGCAG----CTGCA-----GAG------ACCG----CGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--CAGCCGTCTTAGCAAAAAGCAGACAGGTGTCCCCTCACCCGCGGCGACTCAGCGTAT
ACAACACTTGTTTAACGCTAATCTATTT-------------------------------CTGCTATTCCTGCT-AAGCTC
CGCCTAGTCACCACC-CATATCTTAATTCTCCCTTTT------------CGCGCCCGCGCCCTCGACCGCGCAGGCGCAC
GGCTCTCG----TCTCT----GTCGCCGCTGCCG-------ACCTTGTCCTCA--------TGCTCGGCACCTTCTCCCC
CTTTAAAATCACAAGCATCCCTCCAAC----TCCA------TCAAGCCTCACGCAGCACAACACCCAGAGAGCAG-----
--------CT--AGCTATCCAT---------CATCGACCATCCATCATCACGCACACTGCACACACACGAGGCAGGCAGA
GAGAAGCAGAGAGAGCT---AGGAGCA-GAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGCGGGCGGCATCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCGGGCGGGATGCTGGTGCAGAAGCGCCGGGGCCCGGACGACGATG---------CGGTGGTCGAGGCCATCCTGGT
GAAGGTCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTCTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGCCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAAGACCCCGCCGTCACGGAGAGGAAGCTCCGGTC
CACCAGCCTCGCGCAGCTCATGGGGGTACCCTGCCATTCCTTCATCCAAGTCTA-GAAACCC-ACG-CCCATCAGCTGTT
CTCGCTGTTTA-T---------------------------TTGGGCGAAA---GATCGGTTTCAGGTGTGTTAATTAA--
GTC-TTAACTGCGTTGCTTTCATTCTTCAGAGTCGTTTTAGGT----------------TTTAACTCCGAGCCTGGATTC
GGCCGGTTAAATCGAAACAT------------------------GTGCATCG---TTAGGACACACTTCCGTACAGTACA
GTACATATTGTAAATTACTGT--TG-----TAATTTGTA----TAAGGAGACAATGACAGTGACTGTGCTGTTTACAAAT
GTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAC--GTGT--GTGTCCATTC
TTTGTCTCTTGCTCCTTGTACAGTCCTCTTCTGATCGTGCATATACATTTATCAATGTATCCTTATGATGAAATTAGGGC
CACCCCAACGCGGTGCATC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3A_571
AACTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ACCTGCAGCTGGTGGGATGATTCCG
TCGG-CTCCAGCCATTGATGCAG----TTGCAGGGCGGAG------ACCGCGTTCGTT-----------GCCACCTCCCC
ATGTGCTG-------CCGATC--TCGTCGCCTCAGC-AACAGCAGACATGTGTCGCCTCACTCGTGTCGACTCAGCGTCA
ACAACGCTCGATTAACGCTAATCTG----------------------------------------TTCCCGCT-AAGCTT
CGCCTAGTCACCACC-CATATGGCCATATAGGAGTATCTTTT-------------CGCGCCG------------GCGCAT
GGCTCTCG----TCCCT----GTCGCGACTGCCG-------ACCTTGTCCTCGTCCTTTTAGGATCCGCG------TCCC
CTTTAAAATCCCAAGCATCT------C----ATCA------TCAAGCCTCAGACAGCACCACACCCAGAGAGCAGAGAGC
AGAAGCAGCT--AGCTATCTATACATCGAGTGATCGACCATCCATCGTCACGCACACTGCTCACACGCGAGGCAGGCAGA
GAGAAACAGAGAGAGCT---AGGAGCA-GAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCAC---GGCG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGCCCGGGCGGGATGCTGGTGCATAAGC---------CCGACGACGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGT
GAAAGTATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCGTCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACTGGGCTCTGGCCCAGGGAGCAGCGGCTCCTGTACCGGGGCCGGGAGAGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTCCAGGACAAGGACAAGGTGCTGCTCCTGGAAGACCCTGCCGTGACCGAGAGGAAGCTGAGGTC
CACCAGCCTCGCGCAGCTCATGGGGGTGCCCTGCCACTCCTTCATCCAAGTATA-GAAACCC-ACACATCCTCCTGATCG
ATCGATTTTTCTTTCTTTC----TCGCCGGCTGCTCTTGCTTGGGCGAAGATCGATCGTTTT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3D_581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAGCCGGTGAGAGGATTCCG
TCGG-CCCC-GCCATTCATGCAG----ATGCA-----GAG------ACCG----CGTTCGTTACCACTTACCACCTCCCC
ATGTGCTG-------CTCCGTTTCCGTCGCATCAGC-AACAGCAGACATGTGTCGCCT----------AACTCAGCGTAT
ACCACACTCGATTAACGCTAATCTATTCCCT-------------------------------CCATTCCCGCT-AAGCTT
CGCCCAGTCACTCGTGCATATCTTAATTCTCCTTTTTT-----------CGCGCCAGCCC------------------AC
GGCTCTCGCCCCTCTCT----GTCGCGACTTCCA-------ACCGTGTCCTCA--------TCCTCGGCACCTTCTCCCC
CTTTAAAATCACAAGCATCT------C----TCCA------TCAAGCCTCACGCAGCTCAACACCCAGAGAGCAG-----
--------CTT-AGCTAGCCATCCATCGG-------------CATCACCAGTT------------CACACGCGAGGCAGA
GAGGAACAGAGAGAGCGCGGAGGAGCA-GAGATGGTGAAGATTCCTAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGA
GCATGGTGGTG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGGATCGAGTGGGAGGTT
CGGCCGGGCGGGATGCTGGTGCAGAAGCGCCGGACGCCGGACGAT---------GACGACGTGGTCGAGGCCATCCTGGT
GCGGGTGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTC
CACCAGCCTCGCGCAGCTCATGGGGGTGCCCTGTCACTCCTTCATCCAAGTCTAAGAAACCC-ACGCCCCATCAGCTGTT
CTCGCTCTTTGTT---------------------------TTGGGCG-AA---GATCGGTTTCAGGTGTGCTAGTTAA--
GTGTTAG-CTGCATTCTTTTCTTTCTTTAGAGTTTTTTTTGGG----------------TTCAA-TCAGGGCTTAGATTT
GGCCGATTGAATCGAAAA-C------------------------GGGCACCT---TTAGGATAAAA-----TACAGTACA
GTACATGTTGTAAAATT---T--TG-----TAATTTGTA----TAAGCAGACAATGACAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3A_775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCACCACA-CATATCTTAATTCTCCTTTTT------------CGCGCCCGCGC------------------AC
GGCTCTCGTCCCACTCT----GTCGCGATTTCCA-------ACCGTCTCCTCA--------TCCTGGGCACCTTCTCCAC
CTTTAAAATCCCAAGCATCT------C----TCCAACTCCGTCAAGCCTCACGC--CACAACACCCAGAGAGCAG-----
--------CCT-AGCTAGCCACCCATCGG-------------CATCACCAGTTC-------ACCACACACGCGAGGCAGA
GAGGAACAGAGAGAGTGCGGAGGAGCA-GAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGA
GCAC---GGTG---GGCGGCATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTGGTGCAGAAGCGCCGGGCGCCCGACGACGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGT
GAGAGTATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCGTCGACGCCACCGCCACCTTCGGCGACTTCAAGGTTC
TGCTGTCGCTGGCCACTGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGAGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACGGAGAGGAAGCTCAGGTC
CACCAGCCTCGCGCAGCTCATGGGGGTGCCCAGCCATTCCTTCATCCAAGTCTAAGAAACCC-AC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr3A_782
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------C-CATATTTTAATTCTCCTTTTT------------CGCGCCCGCGC------------------AC
GGCTCTC---------------------------------------GTCCTCA--------TCCTCGGCACCTTCTCCAC
CTATAAAATCCCAGGCGTCT------C----TCCA------TCAAGCCTCACGCAGCACAACACCCAGAGAGCAC-----
--------CTT-AGCTAGCCATCCATCGG-------------CATCATCTGTTC-------ATCGCACACGCAAGGCAGA
GAGGAACAGAGAGAACGCGTCAGAGGAGGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCCGGAGCCGGTCCAAAA
GCAC---GGTG---GGCATCGGCGGCGGGGTCGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTG
CGGCCCGGCGGGATGCTGGTGCAGAAGCGCCGGGGGCCGGACGACGACG---------GCGTGGTCGAGGCCATCCTGGT
GCGGGTGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCTCCACCTTCGGCGACCTCAAGGTGC
TGCTGTCACTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCAC
CTGCACATGACCGGCGTGCAGGACAAGGACAAGGTGCTGCTCCTGGAAGACCCCGCCGTCACGGAGAGGAAGCTCCGGTC
CACCAGCCTCGCGCAGCTCATGGGGGTGCCCTGCCATTCCTTCATCCAAGTCTAAGAAACCC-ACGCTCCATCAGCTGTT
CTCGCTGTTTA-T---------------------------TTGGGCC-AA---GATCGGTTTAAGGTGTGTTAGTTAA--
GCGTTTAACTGCATTCTTTTCAATCTTTAGAGTTTTTC-TGGG----------------TTCAA-TCAGGGCTTGGATTT
GGCCGATTGAATCGAAAAAC------------------------GGGCGCCG---TTAGGAGACAA-----TACAGTACA
GTACATGTTGTAAAATA---T--TG-----TAATTTGTACGTATATGCAGACAATGACAGTGTCACAGTGATAGTGTTTT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TACGAATTGTGTACAT--GTGT--GTCTTTATTC
TTTGTTGCTGGCTCCATGTACATTC---TTCCGATGG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>SNPs
------------------------------------------------S-------------------------------
--------------------------S-------------------------------S---------------------
----S-----S-------S-------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------S---------S-------------------
--------------------------------------------------------------------------------
-S--S--------------S-----------S--S----S-------------------------SS-S-----------
--SS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SS----S----------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------S-----------------------------------
----------------------------------------S---------------------S--SS-------------
----------------------------------S------------------SSS------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------S------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------------S--------------SS
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
------------------------------------------------------------S---------------S--S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------SS----------------
------S----------------------------------------------S---------------S---------S
-S-------S-------------SS-S-SSSS-SSSSSSSSSSSSSSSSSSS-------------SS-SS-------SS-
--------SS-S--S-S----S--SS---S--------------------------S---------------S------S
---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_564
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CTATTTGTTTGGGTCG
GCCG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_3114
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TGAAGCC
AGAATGCCGTAGG-------------------------------------------------------------------
----------------------------------------------------------
