>input_sequence_78266
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-----------------ATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGAGCAC---GGTGGGC
GG---CATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTGGTGCAGAAGCGCCGGGCGCCCGACGA---------CGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGTGAGAG
TATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCGTCGACGCCACCGCCACCTTCGGCGACTTCAAGGTTCTGCTG
TCGCTGGCCACTGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGAGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACGGAGAGGAAGCTCAGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCAGCCATTCCTTCATCCAAGTCTAA------------------------------
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-------------------------------------
>chr3A_1_TraesCS3A01G390500
AAAAAAATACAATAGTGACGCACTCCATGGCTGGTGCACCATTACTAGTTAGAACTACTAATGACGCACTTTGCCAGGAT
GCGCCGTTAGTATGTTTGGAAAAATGAAAAAAAATGTTACTTGTGGCGTACCTTGTGCCTGGTGCGTCATTAATATCTTC
CACACTAATGATGCATCACCACATGATGCGTCATTAATATATAGTAATGACACACCACTTCTCTGGTGCGTCATTAGTGT
CAATTTCATTTATAGCTTTTTTCTTAGTAGTGTAAATGGCCCGGGTAAGGAGATGAATTCCAACTAGGGTCTGCGGAGCA
GCGGCCCGGTTAATGTGGGCCGAGCAGGCCATACGAGTGAAAGAGTAAATAATTGGCAGAAGTCAGCGGGGGACGACCGA
GGGATCCAACCGTAGGGTGAGCGAGATCTAACGGCTACCAAGCTCAAAGCGCTGTGGTGGGCCCTAGGTGGCTCGGTTTA
CTTCCTTTGTAATGTACGGAGTACAATGTTTCAGCGCCGTGGTTTGAGACGCACGCTTC---TAAATCACTCGACCAACT
TTATCACCGGACACGGACGTATGTGGTTAGAGACGAAACACATTTTAACAGTAC-GTAGCCTTCAATTCAGGGAAAAAGT
TGTCGATAATACGGGTACGGTATCACAATTAGGAT--ACAATACAGTATCTTAATTCTCCACACATATCTTACTTGTCCA
CACATATTTTACAAAAAGTTGTCGATAAAAGTTTTTCGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCACCACA-CATATCTTAATTCTCCT-TTTTCGCGCCCGCGC------ACGGCTCT
CGTCCCACTCTGTCGCGATTTCCA-------ACCGTCTCCTCA--------TCCTGGGCACCTTCTCCACCTTTAAAATC
CCAAGCAT----CT--CTCCAACTCCGTCAAGCCTCACGC--CACAACAC-------CCAGAGAGCAGC------CTAGC
TAGCCACCCATCGG----------------CATCACCAGTTCACCACACACGCGAGGCAG--AGAGGAACAGAGAGAGTG
CG---G-AGGAGCAGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGAGCAC---GGTGGGC
GG---CATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTGGTGCAGAAGCGCCGGGCGCCCGACGA---------CGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGTGAGAG
TATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCGTCGACGCCACCGCCACCTTCGGCGACTTCAAGGTTCTGCTG
TCGCTGGCCACTGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGAGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACGGAGAGGAAGCTCAGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCAGCCATTCCTTCATCCAAGTCTAAGA----AACCCACA-CCCATCA--------
GCTGGTCTCGCTGTTTG-TTTGGGCGAA-GACCG----------------------GTTTAACTGCATTCTTTTCTTTCT
TTAGAGTTTTTA-TGGG----TTCAATCAGGGCTTAGATTTGGCCGATTGAATCGAAAAA-CGGGCACCGTTAGGAT---
-ACAATACAGTACCTTACTTGTTGTAAAATATTGTAATTTGTA----TAAGCAGACAATGACAGTGTCGCAGTGATTGTG
TTTTCTAGTACAAATGTGTACATGTGTGTCTTTATTCTTTGTTGCTGGCTCCTTGTACATTCTTCCGCTGGAATTAGCT-
--------------TGC---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTACATGTACATCTCTTGCAATT---TACTTGT
GTTTAAGCATTCTTTCATACATTTATGTTTAAGCAAGATGTACACATTAATTAGAATTGAGAATATATTTTCT--GAAGG
TAACGGCCAAC-----TATATTTAAGACATGACTTAACCTGGATTACAGTCAGTTCCACACATGCGAAGGCACTGTCTTT
CTTTTAGGTAAATGTCGCCGCTTTATTAACTTAAAAGAAGTTCGGAATCTCGTCCGCAATCACGTCTAGAATGCAT--TG
GAGGTACACCTAGCCAAACTTTACAAAGTTTCTCACCTACATCTACTTTTGCTAATTTATGCGCGACAACATTAGCTGAA
CGCATAACCCAAGAAACTCTAAAATCATCAAAAGAACGGAGCAAAGTCTTGATTTCCTCAATCCAAGGTCGTACTGCTGA
CAAGTCCTTCTCTGGCTGTTTGATCATGTGTACCAGAGACTGGCTG----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------TCCAGTTCAACATGTACCTTTTGCTCATTGATTT
CCGCTGCTACCAGAAGAGCTCTTTTGCACGCCATAATCTCGGACGCATCGGGATCGACCACATTTGGAAACAGGTGGCAC
GCACCCGCCAAGAAACCTCCATTCTCATCTCGAAGCACTGCTCCTCCACCAGCTTTTCCGCCTTGCCTTGAGATAGCCCC
ATCTGAATTTGCTTTGACCCACCCCTCATCTGGAGCT
>chr3D_501
--------------------------------------------------------------------------------
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--------------------GTACAATGTTTCAGCGCCATGGCTTGAGACGCACGCTTCTAGTAAATCACTCGACCAACT
TTATCATCGGACACGGACGTATGTGGTTAGAGACGAAACAG-TTTTAGCAGTAC-GTAGACTTCATTTTGGGGCAAAAGT
TGTCGACAATACGGTACACCAGTTCGGTTCCAGATGAACAGTACAGTACT--TACATAGATAGAGTAAACAAATGGAAAC
AAACGACAACA-----------------GCCGGTGAGAGGATTCCGTCGGCCCCGCCATTCATGCAGATGC------AGA
GACCGCGTTCGTTACCACTTACCACCTCCCCATGTGC-TGCTCCGTTT----CCGTCGCATCAGCAACAGCAGACATGTG
TCGCCTAACTCAGCGTATACCACACTCGATTAACGCTAATCTATTCCCT-------------------------------
CCATTCCCGCTAAGCTTCGCCCAGTCACTCGTGCATATCTTAATTCTCCTTTTTTCGCGCCAGCCC------ACGGCTCT
CGCCCCTCTCTGTCGCGACTTCCA-------ACCGTGTCCTCA--------TCCTCGGCACCTTCTCCCCCTTTAAAATC
ACAAGCAT----CT--CTCCA------TCAAGCCTCACGCAGCTCAACAC-------CCAGAGAGCAGC------TTAGC
TAGCCATCCATCGG----------------CATCACCAG-----TTCACACGCGAGGCAG--AGAGGAACAGAGAGAGCG
CG---G-AGGAGCAGAGATGGTGAAGATTCCTAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCATGGTGGTGGGC
GG---CATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGGATCGAGTGGGAGGTTCGGCCGGGCGGGAT
GCTGGTGCAGAAGCGCCGGACGCCGGACGA---------TG---------ACGACGTGGTCGAGGCCATCCTGGTGCGGG
TGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCTGTCACTCCTTCATCCAAGTCTAAGA----AACCCACGCCCCATCA--------
GCTGTTCTCGCTCTTTGTTTTGGGCGAA-GATCGGTTTCAGGTGTGCTAGTTAAGTGTT-AGCTGCATTCTTTTCTTTCT
TTAGAGTTTTTTTTGGG----TTCAATCAGGGCTTAGATTTGGCCGATTGAATCGAA-AA-CGGGCACCTTTAGGAT---
-AAAATACAGTACAGTACATGTTGTAAAATTTTGTAATTTGTA----TAAGCAGACAATGACAGTGTCACAGTGATTGTG
TTTTCTACAGATGCGTACTACATGTGTGTCTTTATTCTTTGTTGCTGGCTCCATGTACATTATTTCGATGGAATTAGCAA
TACAGTCCACCCACTGT---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTACATATACATTTCTTGCAATT---TACTTGT
GTTTAAGCATTCTTTGATACATTTATGTTTAAGCAAGATGTACACATTAATTAGAATTGAGAATATTTTTTCG--GAAGG
CAACGGCCAAC-----TATATTTAAGACATGACTTAACCTGGATTACAGTCAGTTTCACACATGCCAAGGCACAGTC---
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-------------------------------------
>chr3B_503
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----------------------ACAATGTTTCAGCGCCATGGCTTGAGACGCACGCTTCTAGTAAATCACTCCACCAACT
TTGTCACCGGACACGGACGTATGTGGTTAGAGACGAAACACAATTTAGCAGTAAAGTAGACTTCAATTCAGGGAAAAAGT
TGTCGAGAATACGGTACACCAGTTTAGTTCCAGATGAACAGTACAGTAGTAGTACTTATATAGAGTAAACAAATGGAAAC
AAACGACAGCAAAGCTAACCAACCTGCAGCCGGTGAGAGGATTCCGTCGGCCCCGCCATTCATGCAGATGCAGAGGGAGA
GACCGTGCTCG-------TTACCACCTCCCCATGTGCCTGCTCCGTCCGATCCCGTCGCATCACCAACAGCAGACAGATG
TCGCCTAACTC-GCGTATACCACACTCGATTAACGCTAATCTATTCCTTTCTGTCAGAAAAAAACGCTAATCTATTCCTG
CCATTCCTGCTAAGCTTCGCCTAGTCACCACA-CATATCTTAATTCTCCT-TTTTCGCGCCAGCC------CACGGCTCT
CGTCCCTCTCTGTCGCGACTTCCA-------ACCGTGTCCTCGTCCTCGCCTCCTCGGCACCTGCTCCCCCTATAAAATC
CCAGGCGT----CT--CCCCG------TCAGGTCTCACGCAGCACAACACCGAGAGGCCAGAGAGCAGC------TTAGC
TAGCCATCCATCGG----------------CATCGTTAGTTCATCACACACGCGAGGCAG--AGAGGACAAGAGAGAGCG
CG---G-AGGAGCAAAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCAAGGAGCAC---GCTGGGC
GG---CGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTGGTGCAGAAACGCCGGGGGCCGGAAAA---------CGACGGCTGCGACGCAGAG---GAGGCCATCCTGGTGAGGG
TGTCCACCGCCGGCGGCGGGTGGCAGCACGACGTGCCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTTCTG
TCGCTGGCCACCGGCCTCTGGCCGAGGGAACAGCGGCTACTGTACCGAGGCCGAGAGCGGGACGACGGTGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCGAGCGGAAGCTCCTGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCTGCCATTCCTTCATCCAAGTCTAAGA----AACCCACGCCCCATCA--------
GCTGTTCTCGCTGTTTA-TTTGGGCCAA-GATCGGTTTGAGGTGCGTTAGTTAAGCGTTTAACTGCATTCTTTTCAATCT
TTAGAGTTTTTTTTGGG----TTCAATCAGGGCTTGGATTTGGCCGATTGAATCGAA-AAACGGGCAGCTTTAGGAT---
-ACAATACACTACAGTACATGTTGTAAAATATTGTAATTTGTG----TAAGCAGACAATGACAGTGTCACAGTGATTGTG
TTTTCTAGTACAAATGTGTACATGT-TGTTTTTATTCTTTGTTGCTGGCTCCATGTACATCCTTTCCATGGAATTAGCAA
CATAGTTCACAC----TGTACAGTGATTGTAATTTGTGTAAGCAAGCAATGACAGTGCCACAGTGATTGTGTTTTTTACT
TCCTCCGTTCCAAAATAGATGACTCAACTTTGAGTCATCTATTTTGGAACGGAGGGAGTACAGATGTGTGCATATGTGCC
TTTATTCTTTGTTGCCGAGTCCAGTTTCATTCTTCTGATGGAATTAGCTACATATACATTTCTTACAATTTACTACTTGT
GTTTAAGCATTCTTTGATACATTTATGTTTAAGCAAGATGTACACATTAATTAGCATTGAGAATATATTTTTTCAGAAGG
TAATGGCCAATTATTATATATTAAAGGCATGACTCAACCCGGAATACAGTCAGTTTCACTCATGCGAAGGCACAGTC---
--------------------------------------------------------------------------------
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-------------------------------------
>chr3A_754
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------------------------TCACCACC-CATATCTTAATTCTCCC-TTTTCGCGCCCGCGCCCGCGCACGGCTCT
CGTCCCTCCCTGTCGCCACTGCCG-------ACCTTGTCCTCA--------TCCTCGGCACCTTCTCCCCCTTTAAAATC
CCAACCATCTCCCT--CCCCA------TCAAGCCTCACGCACCACAACAT-------CCATCGATC--------------
-----------C-----AGCGATCATCCATCCTCACG-------CACACACACGAGGCAGG--------CAGAGAGAGAG
AG---CTAGGAGCAGAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCAC---GGCGGGC
GG---CATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTGGTGCAGAAGCGCCGGGGGCCGGACGA---------CG---------ACGACGTGGTCGAGGCCATCCTGGTGAAGG
TCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTCTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGGCTCTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCGGCCTTCACCGAGAGGAAGCTAAGGTCCACCA
CCCTCGCGCAGCTCATGGGGGTGCCATGCCATTCGTTCATCCAAGTCTA-GTATAGAACAGATGAGCA------------
-----TCTCGCGGTTTG-TTTGGGCGAC-GATCTGCTAGGTGTGTTAACTGAGTG---TTAGCAGCGCTCATTTCTTTCT
TCAGAGTTTTTC-TTGGGGGTTTAATTCAGGGCTTGGATTCGGCCGGTTGAATCAAA-ACATGTGTATCGTTAGGATACA
AAAAATACAGTACAGTACATGTTGTAAATTACTCTAATTTGTA----TAAGGAG--------------------------
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>chr3D_754
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------------------------TCACCATC-CATATCTTAATTCTCCC-TTTTCGCGCCCGCGC------ACGGCTCT
CGTCCCTCTCTGTCGCCACTGCCG-------ACCCTGTCCTCA--------TCCTCGGCACCTTCTCCCCCTTTAAAATC
CCAACCAT----CT--CTCCAACTCCATCAAGCCTCACGCACCACAAC--------------------------------
--TCCATCCATCCATCCAGTGATCATCCATCATCACGC---------------------GGCAGAGAAACAGAGAGAGCG
CG---GCAGAGGAGGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCAC---GGTG---
GGCATCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGCCCGGGCGGGAT
GCTGTTGCAGAAGCGCCGGGCGCCCGACGA---------CGACGGCTGCGACGACGCCGTCGAGGCCATCCTGGTGAGAG
TATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCAGCCTGTGGCCCAGAGAGCAGCGGCTGCTGTACCGTGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTACTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTCCACCA
CCCTCGCGCAGCTCATGGGGGTGCCATGCCATTCCTTCATCCAAGTCTGAGA----AACCCAC-----------------
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>chr3A_762
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---------------------------------CATATTTTAATTCTCCT-TTTTCGCGCCCGCGC------ACGGCTCT
C-----------------------------------GTCCTCA--------TCCTCGGCACCTTCTCCACCTATAAAATC
CCAGGCGT----CT--CTCCA------TCAAGCCTCACGCAGCACAACAC-------CCAGAGAGCACC------TTAGC
TAGCCATCCATCGG----------------CATCATCTGTTCATCGCACACGCAAGGCAG--AGAGGAACAGAGAGAACG
CG---TCAGAGGAGGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCCGGAGCCGGTCCAAAAGCAC---GGTGGGC
AT---CGGCGGCGGGGTCGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTGGTGCAGAAGCGCCGGGGGCCGGACGA---------CG---------ACGGCGTGGTCGAGGCCATCCTGGTGCGGG
TGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCTCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCACTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGACCGGCGTGCAGGACAAGGACAAGGTGCTGCTCCTGGAAGACCCCGCCGTCACGGAGAGGAAGCTCCGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCTGCCATTCCTTCATCCAAGTCTAAGA----AACCCACGCTCCATCA--------
GCTGTTCTCGCTGTTTA-TTTGGGCCAA-GATCGGTTTAAGGTGTGTTAGTTAAGCGTTTAACTGCATTCTTTTCAATCT
TTAGAGTTTTTC-TGGG----TTCAATCAGGGCTTGGATTTGGCCGATTGAATCGAA-AAACGGGCGCCGTTAGGAG---
-ACAATACAGTACAGTACATGTTGTAAAATATTGTAATTTGTACGTATATGCAGACAATGACAGTGTCACAGTGATAGTG
TTTTCTACG--AATTGTGTACATGTGTGTCTTTATTCTTTGTTGCTGGCTCCATGTACATTCTTCCGATGGAATTAGCAA
TACAGTTCACAC----T---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTACATATACATTTCTTGCAATT---TACTTGT
GTTTAAGCATTTTTTGATAAATTTATGCTTAAGCAAGATGTACACATTTATTAGGATTGAAAATATTTTGTTTCCGAAGG
TAAGGGCCAATTATATT---------------------------------------------------------------
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>chr3D_783
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-------------------------------------------------------CGCGCAGGCGC------ACGGCTCT
CGTCTCTGTC----GCCGCTGCCG-------ACCTTGTCCTCA--------TGCTCGGCACCTTCTCCCCCTTTAAAATC
ACAAGCATCCCTCCAACTCCA------TCAAGCCTCACGCAGCACAACAC-------CCAGAGAGCAGC------T----
-AGCTATCCATC-----ATCGACCATCCATCATCACGCACACTGCACACACACGAGGCAGGCAGAGAGAAGC--AGAGAG
AG---CTAGGAGCAGAGATGGTGAAGATCCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCAC---GGCGGGC
GGCATCGGCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCGGGCGGGAT
GCTGGTGCAGAAGCGCCGGGGCCCGGACGA---------CG---------ATGCGGTGGTCGAGGCCATCCTGGTGAAGG
TCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTCTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGCCTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTGCAGGACAAGGACAAGGTGCTCCTCCTGGAAGACCCCGCCGTCACGGAGAGGAAGCTCCGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTACCCTGCCATTCCTTCATCCAAGTCTA-GA----AACCCACG-CCCATCA--------
GCTGTTCTCGCTGTTTA-TTTGGGCGAAAGATCGGTTT------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_783
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-------------------------------------------------------CGCGCCCGTGC------ACGGCTCT
CGTCTCTGTC----GCGACTGCCG-------ACCTTGTCCTCA--------TCCCCAACGCCTTCTCCCCCTTTAAAATC
CCAACCAT----CT--CTCCA------TTAAGCCTCACGCACCACAACAC-------CCAGAGAGCAGC------T----
-AGCTATCCATC-----ATCGACCATCCATCATCACGCA-----CACACACACGAGGCAGGCAGAGAGAAAC--AGAGGG
CGCGCGCAGAGGAGGAGATGGTGAAGATTCCCAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGAGCAC---GGCGGGC
GGCAT---CGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGCCCGGGCGGGAT
GCTCGTGCAGAAGCGCCGGGGGCCGGACGA---------CG---------ACGCCGTGGTCGAGGCCATCCTGGTGAAGG
TCTGCACCGCCGGCGGCGCGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTATACCGTGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTGCAGGACAAGGACAAGGTGCTGCTCCTGGAGGACCCCGCCGTCACCGAGAGGAAGCTCCGGTCCACCA
CCCTCGCGCAGCTCATGGGTGTGCCCTGCCATTCCTTCATCCAAGTCTA-GCATAGAACCCACA-CCCCTCTTGCCGCCG
GCCGTTCTCGCGGTTTG-TTTGGGCGAT-GATCTGCTAGGTGTGTTAACCGAGTG---TTAGCAGCGTTCATTTCTTTCT
TCAGA---------------------------------TTCGGCCGGTTGAATCGAA-ACATGTGCAACGTTAGGAT---
-ACAATACAGTACAGTACATGTTGTAAATTACTCTAATTTGTA-------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr3B_783
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CGCGCCCGCGC------ACGGCTCT
CGTCCCTGTC----GCGACTGCCTGAGCTTCACCTTGTCCTCA--------TCCTCGACACCTTCTCCCCCTTTAAAATC
CCAAGCAT----CT--CTCCA------TCAAGCCTCACCCACCACTACAC-------CCACAGAGCAGAGAGCAGCTAGC
TATCTATCCATCGTGTGATCGATCATCCATCGTCCCGCACACTGCACACACAAGAC--------------------AGCG
CG---GCAGAGGAGGAGATGGTGAAGATTCCTAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCAC---GGTGGGC
GGCAT---CGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGGCCCGGCGGGAT
GCTTGTGCAGAAGCGCCGGGCGCCGGACGA---------CG---------ACGACGTGGTCGAGGCCATCCTGGTGCGGG
TGTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGGTTGTGGCCCAGGGAGCAGCGGCTGCTGTACCGGGGCCGGGAGCGAGACGACGGTGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTGCTCCTGGAGGACCCTGCCATGACCGAGAGGAAGCTCCGGTCCACCA
CCCTCGCGCAGCTCATGGGGGTGCCCTGCCACTCCTTCATCCAAGTCTAAGA----AA----------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr3A_956
--------------------------------------------------------------------------------
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----------------------------------------------CACACGCGAGGCAGGCAGAGAGAAAC--AGAGAG
AG---CTAGGAGCAGAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCCAAGAGCAC---GGCGGGC
GGCAT---CGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGAGGATCGAGTGGGAGGTGCGCCCGGGCGGGAT
GCTGGTGCATAAGC---------CCGACGACGACGGCTGCG---------ACGACGCCGTCGAGGCCATCCTGGTGAAAG
TATCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCGTCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACTGGGCTCTGGCCCAGGGAGCAGCGGCTCCTGTACCGGGGCCGGGAGAGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTGCTCCTGGAAGACCCTGCCGTGACCGAGAGGAAGCTGAGGTCCACCA
GCCTCGCGCAGCTCATGGGGGTGCCCTGCCACTCCTTCATCCAAGTATA-GA----AACCCACA-C--------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr3D_969
G-------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------AGAGAGAAGC--AGAGAG
AG---CTAGGAGCAGAGATGGTGAAGATTCCGAGCCCGAGGAGGCTGTTCAGGAGCCGGTCGAGGAACAC---AGTGGGC
GG---CATCGGCGGGGTGGACATGTGCGCCATGGTGGCCGAGCACGAGCGCATCGAGTGGGAGGTGCGGCCGGGCGGGAT
GCTGGTGCAGAAGCGCCGGGCGCCCCACGACGACGGCTGCG---------ACGACGCCGTCGAGGCCATCCTGGTGCGGG
TCTCCGCCGGCTGCGGCGGGTGGCAGCACGACGTGTCCATCGACGCCACCGCCACCTTCGGCGACCTCAAGGTGCTGCTG
TCGCTGGCCACCGGGCTGTGGCCCAGGGAGCAGCGGCTGCTGTACAGGGGCCGGGAGCGGGACGACGGCGACCACCTGCA
CATGGCCGGCGTCCAGGACAAGGACAAGGTGCTCCTCCTGGAGGACCCCGCCGTCACCCAGAGGAAGCTCCGGTCCACCT
CCCTCGCGCAGCTCATGGGAGTGCCCTGCCATTCCTTCATCCAAGTCTAAGA----AATCTACAC---------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr6B_1979
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---------------------------------------------------------------------------TCTTT
TTTTAAGTTAAATGTCGCCGCTTTATTACCTCAAACGAAGTTTGGAATCTCGTCCGCAATCACATCCAGAATGCATTCTG
GAGGTACACCTAACCAGACCTTACAAAGTTTTTCACCTACACCTACCTTTGCTAATTTATGCGCGGCAACATTTGCTGAA
CGCCTAACCCAGGAAACTCTAAAATCATCAAAAGAACGGAGCATCGTCTTGATTTCCTCTAGCCATGGTCACATTGCTGA
CAAGTTCTTCTCTGGTTGTTTGATCATATGTACAAGAGACTGGCTGAGGCATGGTGGCGGCGAGTCTCGCGGCCTCTGGG
CATCATGGAGGTGCCGGCGGCGGTGAGTGCTTAGCCTGGTGGTGGCGGCGGCCGTGCACGGGAGTTGGATTCCTTTGAAC
AGATCTGGGTGAAAACTTGCTTTTGGCTATTGCCAAGGCCGGCGGTGGCTACGCTATCTGCATCGTTCCCTTCTTGAAGG
CATCACCGTGGGGAAGTTCAAGGCCACTCTCTGCTACCTCTAGGGGAAATCCTAGATCGGATGTTCGGATGACGGCGGCG
CTCTAGTGTCGTTCCCCCCTTTGAGGCATCATTTTTGGAGGTGCACATGTGATCGAGGGACCAGAGGACAGATTCTTTGG
TGGAGCGGTGCTTCATCTCACTCATTGATGGCGGCGGATCTCGACGGCATGGCGTTGGGGTGACTCGGCATCCGATGCAC
GGAGATGGACTCGCGCAGGAGGATGACACGGTCTGGCGTCGTGGTGGCGTCGACGGCAGCTAGACCGGACAAGGTAGATG
CAGTAGTACAGTTCTGAAGATGGATTGGTGGTAGGTGGCTGCGGCGGCCTCATACCAGGCAGGTGTCCGGGTTGAGCAGT
GCGTCAGACCAGTGGGTGCCCCATACCCGGCAGGCGTCCTGGATGGGACCTCGGGTCTTAGATGGTAGGTTTGGCTGCGA
GGTCTGTTGGTATTAGGCCCAGACTATCAGCATCCCTTCATCAAATGGATAGGAGTAGCGACAGATGTTGCCTAGACGGT
GGCTTTAGTCTTACTGTTGTATTACTTTGTAAGGTCTTGTTTGAACAATTAATAAAATGGCTGCATGCATCGTCCAGATG
CAAAGGCTGGGGGTCTTCCTCCATTTCTAAAAAAAGAGACTGGTTGTCCAGTTCAACATGTACCTTTCGCACGTTGATGT
CCGCTACTACCAGAAGAGCTTGTTTGCATGCCATGATCTCGGCTGCTTCAGGATCGACCAGCTGCGGGAACAAGTAGCAC
GCACTCGCTAGGAAGCCTCCATTCTCATCTCGCAGCACTACTCCTCCTCCAGCTTTTCCACCATACCTTGAGATCGCCCC
ATCTGAATTTGCTTTGACCCACCCCTCGTCTGGAGC-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------S---S-------------------------------------
-----------------------------------------------S-----------S--------------------
------S-------SSSSSSSS-SSSSS-SSS--------S-------SSSSS-S-SSSSSSSSS--SSSS-S-S-SSSS
S-SSS-SSSS-S-SSS-SSSSS-SSSS-SSSSS-SSSSS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-----------S-----------------S------------------S------------------------
--------------------------S-----------------------------------------------------
------S------------------------------------S----------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
----S--------------------------S------------------------------------------------
-----------S---------------------------------------------S----------------------
-------------SS---S-------------------------------------------------S-----------
----------------------------------------------------S--------------S----------S-
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-----S--------------------
---------------S----------------------------------------------------------------
-------------------------------------------------------S-----------------S------
S---S--S--------------------S--S---S------S--------------------S--S-------------
------------S---S--S-----------S---------S----S------------------S-------S------
---S-------S-------------------------------SS--------------S-S---S----SS-S------
-----S---------S-----------S-----S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S--S-S-----S-
-----S--------------SS------S-----S-------SS--S--S----------SS-SS--S----S--S----
----S---S-S---S-----------------S------S-------S-----------S--S-S---------S-----
---------------------------S--------S
>forward_434
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------GGGTGAGCGAGATCTAACGG----------------------------------------------
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-------------------------------------
>reverse_1845
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----GTCTCGCTGTTTGTTTGGGC--------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
