>input_sequence_78250
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---------------------------ATGGCCGAGGACGCCCCCAACGCCGGCGCTGAGGACATCCACCCCGCGCCCAC
TGAATCCTTCGCCGACGCAGCTGCCCCTTCGGCGTCGGCAGAGAAGTCCTCGTCGGAGACGCTGCTCCCGTCGCTCAGCA
TCTGGCCGCCGTCGCAGCGCACGCGCGACGCCGTTGTCCGGCGCGTCGTGCAGACCCTGTCCGCGCCCAGCGTCCTCTCT
CAGCGCTACGGCGCCATCCCCGAGCCCGAGGCCGAGGTCGCCGCAGCCGCCGTCGAGGCCGAGGCCTTCGCCGCCGCCTC
GGAGTCCGCCGCCGCCTCCCCCGCCTCCCTGGAGGACGGGATCGAGGTCCTCCAGGCCTACTCCAAGGAGGTCAGCCGCC
GCCTCCTCGAGCTCGCCAAGTCGCGCGCCGCTGCCGCCGCCGCAGCTCCAGAGACCCCCGCGGAACCGAGCGGTGAAGAG
TCGGAGGGTTCGTCGGTGACTGCTCCGCCCCCCACGGAGGAGTAA-----------------------------------
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>chr2A_1_TraesCS2A01G183600
GGGGCTCACGCCGGTGAAGAAGTAGTCGGCCGCGCCGGTGAAGACGGATCTCGACGACGACGACGCGGCCCTGGAATGGG
GGCGCAAGGACTCCATAGCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCACCAGTGCGCCGCCCTGCACCACTTT
GCAGAGCGCCGGCGCGGCCGCGACGAAGGCGG-GTCGTTGTCATCTGCGACAGCGACGACGACGACG---CGCCG---CC
GCCACCAGCCCGCGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACGGCCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGACGGC---------------GGCGAC---GACGGCGACTACTCGGCGTTCAGCCAGTTTCTTTTTTAG
---ATT-AGTT-ATCTATTTTG-----C----TATGTAATGAAAATCCGCGAACATGGCT--AATATATGTCCAAGTTTG
CCGAAGTTTA-TCGTGTTTAGCCGAACTTCGTCGAACCGTGCCGAAATTTGCTATATAAATTTTATTTTTAAACGCATCT
-GTTGGCGGCCCTGGGACCGGCGGCTGGGGACCAACTCGCCCCTAGACTCAACTTTT-GCGCTGACTCA-CCCCAGGCGG
CGATTTTAGGCG-TCCCTGGAAGGCCAACGGCTGGAGATGCTCTAAAACCCATGGCGCACACGAATCAACTTGTGGTTGA
GTTGGTTAGGTGGACAGTGATATCCCCAACCCACCAGGGTTCAAATCCTGATGCTCGCATTATTCCTGAATTTATTTTGG
AATTTTCGGCGATATGCTTTCAGTTGGAGGAGACGTTCTCGTCGACGACGAGGCAATGCTAAAAAAACCCATGGCGCACG
CGGCACGCTGGTCGTCTTCACGTGACGTGACACGTGAGCCGTAACCCTCACCCGTGACGCGAACCAAACCAGACCCAACC
ATCCAAGTCTCCAACCCACAGAAGCACACCTCGCTCTCCTCCCACTCCACGCCACAGATCTCTC--CCTCTCCGCCCCCT
C-CCCCTTGCTCTCCGCTCTCCACGCCATGGCCGAGGACGCCCCCAACGCCGGCGCTGAGGACATCCACCCCGCGCCCAC
TGAATCCTTCGCCGACGCAGCTGCCCCTTCGGCGTCGGCAGAGAAGTCCTCGTCGGAGACGCTGCTCCCGTCGCTCAGCA
TCTGGCCGCCGTCGCAGCGCACGCGCGACGCCGTTGTCCGGCGCGTCGTGCAGACCCTGTCCGCGCCCAGCGTCCTCTCT
CAGCGCTACGGCGCCATCCCCGAGCCCGAGGCCGAGGTCGCCGCAGCCGCCGTCGAGGCCGAGGCCTTCGCCGCCGCCTC
GGAGTCCGCCGCCGCCTCCCCCGCCTCCCTGGAGGACGGGATCGAGGTCCTCCAGGCCTACTCCAAGGAGGTCAGCCGCC
GCCTCCTCGAGCTCGCCAAGTCGCGCGCCGCTGCCGCCGCCGCAGCTCCAGAGACCCCCGCGGAACCGAGCGGTGAAGAG
TCGGAGGGTTCGTCGGTGACTGCTCCGCCCCCCACGGAGGAGTAAGGTGCTGACCCCGAGCCTTGATCCACCGAGGAGTG
CTGCTATTTTGGCATTTCATTGGGGATTATCTATTGTTATTACTACTACTTTATTAGAGATGCCTATGCGATGGGGAATT
GATGTTTGTTTCATGAACCTGGTACCTTGCTACAAACTTTAAGCTATTATCAGCCTATCAAGGGTGCATCATTGTCCTTA
AGGTGTGCATGAATGATTCATCAGGTCATCTGTACTGGCTGCAGTAGATTGCAAGCAGACTGTACCAATGAATATTCATA
GCAATGGTGCCAATTGTATGCTTGTTCCTTCCGTGTTGACTTTGTTCTCGTTTGGATGGTGCAGCAGTATGTGCTTTCGC
TCATTTTTACCTTATGCACTTGGACTGCGTTAGTTCTTAGGTAGGTTTCATTCTGTTAAATAGTACGTTTTAGAGACGTG
ACACAAGTCTCTAAAACGTCTTATATTTATGTACAGAGAGGATAGTATATTGCTGAGCTGATTAAGTAAATACTACATAA
GTACCATCTATTTTGGGTTGAAAATAGGCACATATTGTTTTCTAAAAGTAAAAGGCCACACTCATAG-TTTAGAAGTGTT
TTTTAGGTATTTATGTAACTTTAAACTACAGTTGTTTTTCTAAATCACTCCCTCCGTCCCATAATATAAGAGCGTTTTTG
ACACTACAGGGAGTACAATAGATCAATGATAGTCAATTTTTGGATGACTGAATGGAGCTGCTAGCATTGCAACCAAGACA
ACAACTAACATAGTAACATGCACTACTAGTAGTTGGCACTCCAATGAAGACTACCCGATTGCAATGCTAGGTTTGCACTA
TGCAGCTACGTCTGCATACAGAATTGAGCCATTTTAATTTAGTCGGTCATGTGTTGCTAGATGGGAAGTGCAGTTTACCA
AATACTAAATTGTGAAGCTTCAGTTTCTTCTACCTATGCTTTATGCTAGCTGTCAAGAATATTTCTTTTCATCTAGAAAG
ATGGCT
>chr2A_1
GGGGCTCGTGCCGGTGAAGAAGGAGCCGGCCGCGCCGGTGAAGACGGAGCTCGACGACGACGACGCGACCCTGGAATGGG
CGCGCAGGGACTCCATAGCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGTGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGCGGGGTCGTCGTCATCTGCGACAGCGACGACGACGACG---CGCCA---CC
GCCACCAGCCCGCGTTGGCGACGCCGGTCAGAGGTCCACCAGGGACGGCCGCGTCAAGGAGGAAAAGTC-----------
-C------GATGACGGC---------------GGCGACGACGACGGCAACTACTCGGCGTTCAGCCAGTTTCTCTTTTAG
TTTATT-AGTT-ATCTATTTTT-----C----TATGTAATGAAAACTGGCGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTA-TCATGTTTCGCCGAACTTCATCGAACTGTGCCGAACTTTGCTAAACAAATTTTATTTTCAAACGCGCCT
-GG-GACGGCCCTGGGGCCGGCGGCTAGGGACCAACTCGCCCCCAGGCTCAATTTTT-GCGTCGGCTCACCCCCAGGCGG
CGA-TTTAGGCGCCCCCTGGGAGGCCAACGGCTGGAGACGCTCT------------------------------------
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>chr2A_1
GGGGCTCGCGCCGGTGAAGAAGGAGCCGGCCACGCCGGTGAAGATGGAGCTCGACGACGACGACGTGGCCCTGGAATGGG
CGCGCAGGGACTCCATAGTGATGGAGAAGGAGCGTCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGCGGAGTCGTCGTCATCTGCGACAGCGACGACGACGACG---TGCCG---CC
T-CACCAGCCCGCGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACGGCCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGACAGC---------------GGCGAC---GACGGCGACTACTCGGCGTTCAACAAGTT-CTCTTTTAG
---ATT-AGTT-ATCTAGTTTG-----C----TATGTAATGAAAACCGGCGAACATGTCT--AATATATGTCAAAGTTTA
CCGAAATTTA-TCGTGTTTAGCCGAACTTCGCCGAACTGTGCCGAAATTTGCTATACAAATTTTATTTTTAAACGCGTCT
CGG-GGCGGCCTTAGGGCCGGCTGCTAGGAACCAACTCACCCC-AGGCCCAATTTTT-GCGCCGGCTCACCCCCAGACAG
CGATTTTAGGCGCCCCCTGAGGGGCCAACGACTGGAGATGCTCT------------------------------------
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>chr6A_1
GGGGCTCGCGCCGGTGAAGAAGGAGCCGGCCGCACCGGTGAAGACGGAACTCGACGACGACGACGCGGCCCTGGAATGGG
CGCGCAGGGACTCCATAGCGATGGAGAAGGAGCGTCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGTGGAGTCGTCGTCATCTGCGACAGCGACGACGACGACG---CGCCG---CC
GCCACCAGCCCACGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACGACCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGATGGC---------------GGCGAC---GACGACGACTACTCGACGTTCAGCCAGTTTCTCTTTTAG
---ACT-AGTT-ATCTATTTTG-----C----TACGTAATTAAAATCCGCGAACATGTCT--AATATATGCCTAAGTTTG
CCGAAATTTA-TCGTATTTAGCCGAACTTCGCCGAACTGTGCCGAAATTTGCTATACAAATTTTATTTTTAAACGCACCT
-GG-GGCGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCC-AGGCCCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
CGATTTTAGGCGCATCCTGGGAGGCCAACGGCTGGAGATGCTCTAA----------------------------------
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>chr6A_1
GGGGCTCATGCCGGTGAAGAAGGAGCCTGCCGCGCCGGTGAAGATGGAGCTCGACAACGACGACGCGGCCTTGGAATGGG
CGCGCAGGGACTCCATAGCAATGGAGAAGGAGCGCCTGGAGAAGGCAAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGCCGACGCGGCCACGACGAAGGCGGGGTCGTCGTCATCTGCGATAGCGACGATGACGACG---CGCCA---CC
GCCACCAGCCCGCGTCGGCGACACCGGTCAGGGGTCCACCAGGGACGGTCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGACGGC---------------GGCGAC---GATGGCGACTACTCGGCGTTCAGCCAGTTTCTCTTTTAG
TTTATT-AGTT-ATCTATTTTC-----C----TATATAATGAAAACCGGCGAACATGTCT--AATATATGCCTAAGTTTG
CCGAAATTTA-TCGTGTTTCGCTGAACTTCGCCGAACTGTGCCGAACTTTGCTAAACAAATTTTATTTTCAAACGCGCCT
GGG-GGCGGCCCTGGGGCCGACGGCTGGGGACCAACTCGCCCCCAGGCCCAATTTTT-ACACTGGCTCACCCCCAGGCGG
CGATTTTAGATGCCCCCTGGGGGGCCAACGGCTGGAGATGCTCT------------------------------------
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>chr3A_1
GGGGCTTGCGCCGGTGAAGAAGGAGCCGGCCGCGCCGGTGAAGATGGAGCTCGACGACGACGACGCGGTCCTGGAATGGG
CACGAAGGGACTCCATAGCGATGGAGAAGGAGCACTTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGCGGAGTCGTCGTCATCTGCGACAGCGACGACGACGACG---CGCCG---CC
GCCACCAGCCCGCGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACAGCCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGACAGC---------------GGCGAC---GATGGCGACTACTCGGCGTTCAGACAGTTTCTTTTTTAG
---ATT-AGTT-ATCTATTTTTCTTTTC----TATGTAATGAAAATCCGGGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTA-TCGTGTTTAGCCGAACTTCGCCTAACTGTGCCGAAATTTGATATACAAATTTTATTTTTAAACGCGTCT
GGG-GGCGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCC-AGGCCCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
CGATTTTAGGCGCCCCCTAGGGGGCCAACGGCTGGAGATGCTCT------------------------------------
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>chr7A_1
GGGGCTCGCGCCGGTGAAGGAGGAGCC-GCCGCGCCGGTGAAGACGGAGCTCGACAACGACGACGCGGCCCTGGAATGGG
CGCGCAGGGACTCCATAGCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCACCAGTGCGCCGCCCTGCGCCGC-TC
GCGGAGCGCCGACGCGGCCACGACGAAGGCAGGGTCGTCGTCATCTGCGACAGCGACGACGACGACG---CGCCA---CC
GCCACCAGCCCGCGTTGGTGACGCCGGTCAGGGGTCCACCAGGGACGACCGCGTCAAGGAGGAGAAGTC-----------
-C------GACGATGGC---------------GGCGAC---GACGGCGACTACTCCGCGTTCAACCAATTTCTCTTTTAG
TTTATTAAGTT-ATCTATTTTG-----C----TATGTAATGAAAACCGGCGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTA-TCGTGTTTCGCCGAACTTCGCCGAACTGTGCCGAACTTTGCTAAACAAATTTTATTTTCAAACACGCCT
GGG-GATGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCCCGGGCCCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
CGATTTTAGGCGCCCCCTGAGGGGCCAACGGCTGGAGATGCTCT------------------------------------
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>chr7A_1
GGGGCTCGCGCCGGTGAAGACGGAGCCGGCCGCGCCGGTGAAGATGGAGCTCGACGACGACGACGCAGCCCTGGAATGGG
CGCGCGGGGCCTCCCTAGCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCAGTGTGCCGCCCTGCGCCGCTTC
GCAGAGCACCGACGCGGCCGCGACGAAGGCGGGGTCGTAGTCATCTGCGACAATGACGACGACGACG---CGCCG---CC
GCCACCAGCCCACGTTGGCGACGCCAGTCAGGGGTCCACCAGGGACGGCCACGTCAAGGAGGAGAAGTC-----------
-C------GACGACGGC---------------GGCGAC---GACGGCGACTACTCGG-GTTCAGCCAGTTTCTCTTTTAG
---TTT-AGTT-ATCTATTTTG-----C----CATGTAATGAAAACGGGCGAACATGTCT--AATATATGCCCAAGTTTA
CCGAAATTTA-TCGTATTTAGTCGAACTTCGCCGAACTGTGCCAAAATTTGCTATACAAATTTTATTTTTAAACGCGCCT
GGG-GGCGGGCCTGGGGCCGGCGGCTGGGGACCAACTCGCCTC-AGGTCCAATTTTT-ACGCCGGCTCACCCTCAGACGG
CGATTTTAGGCGCCCCCTGAGGGGCCAATGGCTGGAGATGCTCT------------------------------------
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>chr7A_1
GGGGCTCGTGCCGGT---GAAGGAGCCGGCCGCGCCGGTGAAGACGAAGCTCGACGACGATGACGCGGCCCTGGAATGGG
CGCGCAAGGACTCCATGGCGATGAAGAAGGAGCGCATGGAGAAGACGAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGCGGAGTCGTCGTCATCTATGACAGCGACGACGACGACG---CGCCA---TC
GCCACCAGCCCGTGTTGGCGACGCCGGTCAGGGGTCTACCAGGGACGGCCGCGTCAAGGAGGAGAAATC-----------
-C------GACGACGGC---------------GGCGAC---AATGGCGACTACTCGGCGTTTAGCCAGTTTCTCTTTTAG
TTTATT-AGTT-ATCTATTTTC-----C----TATGTAATGAAAACCGGCGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTA-TCGTATTTCGTCAAACTTCGCCGAACTGTGCCGAACTTTGCTAAACAAATTTTATTTTCAAACGCACCT
GGG-A-CCGCCCTGGGGCCGGCGGCCGGGGACCACCTCGCCCCCAGGCTCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
GGATTTTAGGCG-TCCCCT-GAGGGCAACAGCTGGAGATGCTCT------------------------------------
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>chr1A_1
GGGGCTCGCGCCGGTTAAGAAGGAGCCGGCCACGCCGGTGAAGATGGAGCTCGACGACGATGACGCGGCCCTGGAATGGG
TGCGCAGGGACTCCATAGCGATAGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGCGCCGCTTC
GCGGAGCGTCGACGCGGCCGCGACGAAGGCAGAGTCGTCGTCATCTACGACAGCGACGACAACGACG---CGCCG---CC
---ACCAGTCCGCCATGGCGACGCC------GGGTCTAGCAGGGGTGCCCGCGTCAAGGAGGAGAAGGC-----------
-C------GACGACGACGACGGCGGTGAGGATGGCGGC---GACGGCGGCGAC------TTCTGCCAGTTTCTTTTTTAG
---ATT-AGTTTATATA-TGTG-----C----TATGTAATGAAAATCCGCAAACTTTGTCGAAATATATGCCCAAGTTGG
CCGAAATTTA-TCGTGTTTAGCCGAACTTCGCCGAACTGTGCCGAAATTTGCTATACATCTTTTATTTTTAAACGCGCCT
GGG-GGCGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCCTAGGCCCAATTTTT-GCGCCGGCTC--CCCCAGGCGG
CGATTTTAGGC-CCCCCTGGGGGGCCAACGGCTGGAGATGCTCT------------------------------------
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>chr5A_1
GGGGCTCGCGCCGGTGAAGAAGGAGCTGGCCGAGGCGGTGAAGACGGAGCTCGACGATGACGACGTGGCCCTGGAATGGG
CGCGCAGGGACTCCATAGCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTGTGCCGCTTC
GCGGAGCACCGACGCGGACGCGACGAAGGCGGAGTCATCGTCATCTACGATAGCGACGATGACGACG---CGCCG---CC
---ACCAGTCCGCCATGGCGACGCC------GGGTCCAGCAGGGGCGCCCGCGTCAAGGAGGAGAAGGT-----------
-C------GACGACGACGACGGCGGTGAGGATGGTGGC---GACAGCGGCGAC------TTCAGCCAGTTTCTTTTTTAG
---ATT-AGTTTATATA-TGTG-----C----TATGTAATGAAAATCCGCAAACTTTGTCGAAATATATGCCCAAGTTGG
CCGAAATTTA-TCGTGTTTAGCCGAACTTCACCGAACTGTGCCAAAATTTGCTATACATCTTTTATTTTTAAACGTGCCT
GGG-GGCGGGCCTGGGGCCGGCGGCTGGGGACCTACTCGCCCCCAGGCCCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
TGATTTTAGGCG-CCCCTGGGGGGCCAACGGCTGGAGATGCTCTTATACCACTGGAGCAC--------------------
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>chr3A_98
--------------------------------------------------------------------------------
-----------------GCGATGGAGAAGGAGCGCCTGGAGAAGGCGAAGGAGCGCCAGTGCGCCGCCCTACGCCGCTTC
GCGGAGCGCCGACGCGGCCGCGACGAAGGCGGAGTCATCGTCATCTGCGACAGCGACGACGACGATG---CGCCG---CC
GCCACCAGCTCGCGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACAGCCGCGTCAAGGAGGAGAAGTC-----------
-C------AACGATGGC---------------GGCGAT---GACGGCGACTACTCGGCGTTCAGCCAGTTTCTCTTTTAG
---ATT-AGTT-ATCTATTTTG-----C----TATGTAATGAAAACCGGCGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTA-TCGTGTTTAGCCGAACTTCGCCGAACTGTGCCGAAATTTGCTATACAAATTTTATTTTTAAACGCTCCT
GGG-AGTGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCCCAGGCCTAATTTTT-GCGCCGGCTCACCCCCAGGCGG
CGATTTTAGGCGCCCCCTGGGGGGCCAACGGCGGGAGATGCTCTAA----------------------------------
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>chr6A_115
--------------------------------------------------------------------------------
----------------------------------CCTGAAGATGGCGAGGGAGCGCCACTGCGCCGCCCTGCGGCGCTTC
GTGCAGCGCCGTCGGGGCCGCGACGAAGGAGGAGGGGTCGTTATCGATGACAGCGC--------------TGCCG---CC
GCCACCAGTCCGCCATGGCGACGCC------AGGTCTAGCAGGGGCACCCGCGTCAAGGAGGAGAAGGC-----------
-C------GACGATGACGACGACGGTGAGGATGGCGGC---GACGATGACTACTCGGCTTTCAGCCAGTTTCTTTTTTAG
---ATT-AGTT-ATATA-TTTG-----C----TATGTAATGAAAATCCGTGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTAGTCGTGTTTAGCCGAACTTCGCCGAACTTTGCCAAAATTTGCTATATATTTTTCTTTTTTGAATGCGCCT
GGG-GGCGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCCCAGGCCGATTTTTT-GCGCCGGCTCACCCCTAGGCGG
CGATTTTAGGCGCCCCCTGAGGGGCCAACGGCTGGAGATGCTCTGAAAC-------------------------------
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>chr5A_115
--------------------------------------------------------------------------------
----------------------------------CCTGAAGATGGCGAGGGAGCGCCAGTGCGCTGCCCTACAGCGCTTC
GCACCGCGCCGCCGGGGCCGCGACGAAGGAGGCGTCATCGTCATCGAAGACAGCGACGACGACGACG---CGCCA---TC
GCCACCAGCCTGCGTTGGCGACGCCGGTCAGGGGTCCACCAGGGACGGCCACGTCAAGGAGGAGAAGGC-----------
-C------GACGACGGC---------------GGCGAC---GACGGCGACTACTCGGTGTTCAGCCAGTTTCTTTTTTA-
---ATT-AGTT-ATCTATTTTG-----C----TATGTAATGAAAATTCGCGAACATGTCT--AGTATATGCCCAAGTTTG
CCGAAATTTAGTCGTATTTAGTCGAACTTCGTCAAACTTTGCCGAAATTTGCTATAC-----TTTTTTTTAATCGTGCCT
-GG-GGCGGCCCTGGGATCGGCGGCTGAGGACCAACTCGCCCCCAGACTCATTTTTT-GCGTCGACTCACCTTCAGGCGA
CGATTTTAGACGCACCCCTGAGGACCAACGGCTAGAGAGGCTCTTAGACC------------------------------
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>chr5D_115
--------------------------------------------------------------------------------
----------------------------------CCTGAAGATGGTGAGGGAGCGCCAGTGCACCGCCCTGCGGCGCTTC
GCACAGCGCCGCCGGGGCCGCGACGAAGGAGGAGTCGTCGTCATCGACGACAGCGACAACGACGACG---CGCCGTCGCC
GCCACCAGTCCGCCATAGCGACGCCGGGGAGGGGTCTAGCAGGGGCGCCCGCGTCAAGGAGGAGAAGGCCGACGATGATG
ACGACGGTGAGGATGGC---------------GGCGAC---GACGGCGACTACTCGGCGTTCAGCCAGCTT----TTTAG
---ATT-AG-TTATATA-TTTG-----C----TATGTAATGAAAATCCGCGAACATGTCT--AATATATGCCCAAGTTTG
CCGAAATTTAGTCGTGTTTA--------------------GCCGAAATTTGCTATATATTTTTCTTTTTTGAACGCGCCT
GGG-GGCGGCCCTGGGGCCGGCGGCTGGGGACCAACTCGCCCCCAGGCCGATTTTTTTGCGCCGGCTCA-CCCCAGGCGG
CGATTTTAGGCGTCCCCTGGGGGGCCAACGGCTGGAGATGCTCTAAATCCC-----------------------------
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>chr2B_116
--------------------------------------------------------------------------------
-----------------------------------CTGAAGATGGCGAGGGAGCGCCAGTGCGCCGCCCTGCATCGCTTC
ACGCAGCGCCGCCGAGGCCGTGACAAAGTAGGAGTCGTCATCATCGAAGACAGCAACGACGACGACGATGCGCCGCCGCC
GCCACCA---------------GCCAGGGAGGGGTCCAGCAGGGGCACCCGAGTCAAGGAGGAGAAGGC-----------
-C------GACGATGGC---------------GGCGAC---GACGGCGACTACTCGGCGTTCAGCCAGTTTTTTTTAGA-
---TTA-AGTTTATATA-TTTG-----CTATGTATGCAATGAAAATCCGCGAACATGTCT--AATATATGCCCAAGTTTG
CTGAAATTTG-TCGTGTTTAGCCGAACTTCGCCGAAATTTGCCTAAATTTGCTATACATTTTTATTTCTTTAACGCGCCT
CGG-GGTGGTCCTGGGGGCGGCGGCTGGAGATCAACTCGCCCCCAGGCCCATTTTTT-GCGCCGGGTCACCCCCAGGCGG
CGATTTTAGGCGCCCCTTGGGGGGCCAACGGCTGGAGATGCTCTAATACCC-----------------------------
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>chr4A_132
--------------------------------------------------------------------------------
---------------------------------------------------AGCGCCAGTGCGCCGCCCTGCGCCACTTC
ACGGAGCGCCGACGCGGCCGCGACGAAGGCGGAGTCGTCGTCATCTGCGACAGCGACGACGACGACG---CGCCG---CC
GCCACCAGCCCGCGTTGGCAACGCCGGTCTGGGGTCCACCAGGGACGGCCGCGTCAAGGAGGAGAAGTCCGACGACGCCG
GC------GACGATGGC---------------GGCGAC---GACGGTGACTACTCGGCGTTCAGCTAGTTTCTTTTTTAG
---ATT-AGTT-ATCTATTTTG-----C----TATGTAATGAAAATCCGCGAACATGTCT--AATATATGCCCAAGTTTG
CCAAAATTTA-TCGTGTTTAGCCGAACTTCGCCGAACTATGCCGAAATTTGCTATACAAATTTTATTTTTAAACGCGCCT
GGG-GGCGGCCCTGGGGCCGGCAGCTGGGGACCAACTCGCCCCCAGGCCCAATTTTT-GCGCCGGCTCACCCCCAGGCGG
CGATTTTAGGCGTCCTCTGGGGGGCCAACGGCTGGAGATGCTCTTACAAACCC---------------------------
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>chr2D_809
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------------------------------------------------------------------------GGCGCACG
CGGCACGCTGGTCGTCTTCACGTGACGTGACACGTGAGCAGTCTCCCTCACCCGTGACGCGAACCAAACCAGACCCAACC
TTCCAAGTCTCCAACCCACAGAAGGACACCTCGCTCTCCTCCCACTCCACGCCACAGATCTCTC--CCTCTCCGCCCCCT
T-CCCCTA-------GCTCTGCACGCCATGGCCGAGGACGCCCCCAACGCCGGCGCTGAGGACATCCACCCCGCGCCTAC
CGAAGCCTCCGCCGACGCCGCTACACCTCCGGCGTCGGCAGAGAAGTCCTCGTCGGAGACGCTGCTCCCGTCGCTCAGCA
TCTGGCCGCCGTCGCAGCGCACGCGCGACGCCGTAGTGCGGCGCGTCGTGCAGACCCTGTCCGCGCCCAGCGTCCTCTCC
CAGCGCTACGGCGCCATCCCTGAGCCCGAGGCCGAGGGCGCCGCAGCCGCCGTCGAGGCCGAGGCCTTCGCCGCCGCCTC
GGAGTCCGCCGCCGCCTCCCCCACCTCCCTGGAGGACGGGATCGAGGTCCTCCAGGCCTACTCCAAGGAGGTCAGCCGCC
GCCTCCTCGAGCTCGCCAAGTCGCGCGCCGCTGCCGCCGCCGC---AACAGAGACCCCCGCGGAACCGAGCGCTGAAGAG
TCGGAGGGTTCGTCGGTGACTGCTCCGCCCCCAACGGAGGAGTAAGGTGCTGACCCCGAGCCTTGATCCACCGAGGAGTG
CTGCTATTTTGGCATTTCGTTGGGGATTATCTATTGTTATTACTACTACTTTATTAGAGATGCCTATGAGATGGGGAATT
GATGTTTGTTTCATGAACCTGGTGCCTTGCTACAAACTTTAAGCTAT-ATCAGCCTATCAGGGGTGCATCATTGTCCTTA
AGGTGTGCATGAATGATTCATCAGGTCATCTGTACTGGCTGCAGTAGATTGCAAGCAGATTGTACCAATGAATATTCGTA
GCAATGGTGCCAATTGTATGCTTGTTCCTTCTGTGTTGAGTTTGTTCTCGTTTGGCTGGTGTAGCAGTGTTTGCTT-GGT
CCATTTTGACCTTATGCACTTGGATTGCGTTAGTTCTTAGGTAGGTTTCATTCTGTTGAATAAGTACGTTTCTAGTA---
----------------------ATATTTATGTACAGAGAGGATAGTATATTGCTGAGCTGATTAAGTAAATACTACGTAC
GTACTATCTATTTTGGGTTGAAAATAGGCACATATTGTTTTC------CAAAAGGCCACATGCATAAATTTGTAAGTGCT
TTT-AGGTGTTTAT------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GTAACATGTACTGCTAGTAGTTGGCACTCCAGTGAAGACTACCCGATTGCAATGCTAGGTGTGCACTA
TGCAGCTACGTCTGCATACAGAATTAAGTCATTTTAAATTAGTTGGTCATGTGTTGCTAGATGAGAAGTATAGTTTACCA
AATACTAAATTTTGAAGCTTCAGTTTCTTCTACCTATGCTTCATGCTAGCTGTCAAGAATA-TTCTTTTCATCTAGAAAG
ATGGCT
>chr2B_846
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ACACGTGAGCAGTCCCCCTCACCCGTGACGCGAACCAAAC--GACCCAACC
ACGCAAGTCTCCAACC----------CACCTCGCTCTCCTCCCACTCCACGCTACAGATCTCTCTCCCTCTCCGCCCCCC
GCCCCCTT-------GCTCTCCACACCATGGCCGAGGACGCCCCCAACGCCGGCGCTCAGGACATCCACCCCGCGCGTAC
TGAAGCCTCCGCCGACGCTGCTACCCCTCCGGCACCAGCAGAGAAGTCCTCGTCGGAGACGCTGTTTCCGTCGCTCAGCA
TCTGGCCGCCGTCGCAGCGCACGCGCGACGCCGTTGTCCGGCGCGTCGTGCAGACCCTGTCCGCGCCCAGCGTCCTCTCC
CAGCGCTACGGCGCCATCCCTGAGCCCGAGGCCGAGGGCGCCGCCGCCGCCGTCGAGGCCGAGGCCTTCGCCGCCGCCTC
GGAGTCTGCCGCTGCCTCCCCTGCTTCATTGGAGGACGGGATCGAGGTCCTCCAGGCGTACTCCAAGGAGGTCAGCCGCC
GCCTCCTCGAGCTCGCCAAGTCGCGCGCCGCTGCCGCCGCCGC---TCCAGATACTCCCGCGGAACCGAGCGCTGAAGTG
TCGGAGGCTTCGTCGGTGACTGCTCCGCCCCCCACGGAGGAGTAAGGTGCTGACCCCGAGCCTTGATCCACCTGGAAGTG
CTGCTATTTTGGCATTTCGTTGGGGATTATGTATTGTTACTACTACTACTTTATTAGAGATGCCTATGAGATGGGGAATT
GATGTTTGTTTCATGAACATGGTACCTTGCTACAAACTTTAAGCTATTATCAGCCTGTCAGGGGTGCATCATTGTCCTTA
AGGTGTGCATGAATGATTCGTCAGGTCATCTGTACTGGCTGCAGTAGATTGCAAGCAGATTGTACCAATGAATATTCGTA
GCAATGGTGCCAATTGTATGCTTGTTCCTTCTGTGTTGAGTTTGTTCT-GTTTGGCTGGTGTAGCAGTGTTTGCTTTGGT
CCATTTTAACCTTATGCACTTGGATTGCGTTAGTTCTTAGTTAGGTTTCATTCTGTTGAATAGTACGTTTTAGAGACTCT
GT-CAAGTCTCTAAAACGTCTTATATTTATGTACAGAGAGGATAGTATATTGCTGAGCTGATTAAGTAAATACTACGTAC
ATACCATCTATTTTGGGTTGAAAATAGGCACATATTGTCTTC------TAAAAGGCCACATGCATACTTTTATAAGTGTT
TTT-AGGTATTTATGTAACTTTAAACTACAGTTGTTTTTCTAAAT-----------------------------------
-------------TACAATAGATCAATGATAGTCAATTTTTGGATGACTGAATGGAGCTGCTAGTTTTGCACCCAAAACA
ACAACTAACATAGTAACATGTACTACTAGTAGTTGGCATTCCAATGAAGACTACCCGATTGCAATGCTAGGTGTGCACTA
TGCAGCTATGTCTGCATACAGAATTAAGTCATTTTAATTTAGTTGGTCATGTGTTGCTAGATGAGAAGTGCAGTTTACCA
AATACTAAATCGTGAAGCTTCAGTTTCTTCTACCTATGCTTTATGCTAGCTTTCAAGAATATTTCTTTTCATCTAGAAAG
ATGGCT
>SNPs
----------------------S--S----------------------S-------------------------------
S------------------------------------------------------------------------------S
-----------S--------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-------------------------------S------------------------------------------
--SS------------------------------------------------S---------------------------
---------------------------------------------------S---S----SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------------------------------------S--SS------------------------------------
------------------------S-------------------------------------------------------
S-------SSSSSSS--------------------------------------------------------------S--
----S---S---------S---S-----S---------------------------------------------------
-------------------------------------------------------------------------------S
--------------------S----------------S------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSS--------------------------S-------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------S-----------
------------------------------------------------------------S-------------------
-----------------------------------------------------------S-----------------S--
-------------------------------S-------S---------------S-----S------S-S------S-S
S------S----------------S--------------------------------S-------------------SSS
SSS-------------------------------------------------------------------------S--S
------------------------------------------SSSSSS------------SS----S-----S-------
---S-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---------------------------------------------------SS-----S----S---
--------------------S---------------------------------------------------S-------
-------------------------S--S--------------S-------------------S----------------
--------------------------------------------------------------------------------
------
>forward_714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCGCACACGAATCAACTTGT------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_2206
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------CACTCCCTCCGTCCCATAAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
