>input_sequence_78167
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------------------------ATGAAGGCGAACGGCAGCAAGAGCATGTCGGCGCACCTGACGTGTAACATGGCGCC
CAGCCGCGGCGCCGGCGCCGTCGACGACGGCCCGCCGCAGCCGCAGACGGCCACCTGCTGCACGGCGCTGCAGCGGGGCT
TCCCGGCGGACGGGAAGCCGACGCAGTCGCGGTTCGCCCCCGTGAGGACGCCCGGCTCGGCGGCCATGATGCTGCACGCC
GACGACAACGGCCCTATAGAG---GAGGAGGAGCCGGAGGAAGGGGAGGGGCAG------------CATCAGCAGCAGAA
GCAGATGCAGAAGCAGGCCACAACGCCGACCAAGAGGGCGGCGGCGG---CGACCAAGACGATGATCAAGAAGATGGTGC
GCAAGTGCAAGTCGTCGGTGGCGGACGTGGACGTGGCGCGGCTCGGCGACGCGGCCCCGCAGACGCCGCGTCTCCGGCGC
AGCGGCGCCATCCGCCGGGAATGGAGCTTCGAGGACCTCCACGGCGGCAACAACGCCGCCTAA-----------------
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----------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G056100
GTTCATGTAAAACAACATCTTTGTTACAACGTGGTCTATGTTTCAACCATCTCGGCTGCTACCCTGTCCTTTGCAGCATG
CCTCGTGTTGCAACTACACATTGGCCATGTTGCAATTTCAGGCTGAGCCCCCACACACGCGTCAC-------A-------
CGCTACCCTCGTCCTTTGCAACATGAGCCATGTTGCAAGCACATGCTGAGCGCCCACACGGT------------------
--------------------------------------------------------------------------------
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-------CACACGGACACGTATAACACGCCTCGCACTGCCTGTTCCTTTGAACATGACCTGTGTTGCAATTGCAGCATGA
CCCGC--ATTGTAAAATCCGAATGAGCTCCCACAAAGACATGTGCCAGGCACACGGGGCAGCAGACGACACGACTTGCAA
CAC-----------------GTTGCAAAATCTGACTGAGCTCCTGCAAGGACATGTGTCAGGCGCGCGCGGCGGCGGACG
GCACGACGCAGCTGAGAGCTAGCCTTTTTCTAAAAGAAAATCTTTTTTTGCGGTAATCAAGAGAGCTTTACTAAATCACA
GCAGACCTAGGACAATCAACCATCAAGCTAGTCACTAGGAAGCTACGTATCACATCGAGCCAGCCAGCATTCGGTCACAT
TCAATGTGCAGGCATGTTTAACACAAAGATGAGCCGGAACGTTAGCTGAATGATTTATATGAAGTACATTAAACAAAGAG
AAATTGCTAACTAGCTCTCCAATTTCAAGTAAGATAGGAGCCATAATTGAACGAGAATTGTGGCGAGTATTTGGAGGAAC
GTTGTATATA-----CTCCTCTACTAAAGTGTATACTTTGAAAAAAAAAATAGAGACACGTGTTGCAGCTATGTCCATCC
AGATTTAGGTGCACACGTCCATAATTAGCCCGCGGAGGTCGGGTGTCGCCT-AGCATGCATGCAGAGGATAAAATGGATC
CATCCATGGAGCTCACCGGCCGGACGTTCCTCGTTCTGTCCAACTAATTACTACGCGCGTTCCTGTTCGACCCACGTACC
TGCGCAGGCGCGGCGCGGGGATCGATGAAGGCGAACGGCAGCAAGAGCATGTCGGCGCACCTGACGTGTAACATGGCGCC
CAGCCGCGGCGCCGGCGCCGTCGACGACGGCCCGCCGCAGCCGCAGACGGCCACCTGCTGCACGGCGCTGCAGCGGGGCT
TCCCGGCGGACGGGAAGCCGACGCAGTCGCGGTTCGCCCCCGTGAGGACGCCCGGCTCGGCGGCCATGATGCTGCACGCC
GACGACAACGGCCCTATAGAG---GAGGAGGAGCCGGAGGAAGGGGAGGGGCAG------------CATCAGCAGCAGAA
GCAGATGCAGAAGCAGGCCACAACGCCGACCAAGAGGGCGGCGGCGG---CGACCAAGACGATGATCAAGAAGATGGTGC
GCAAGTGCAAGTCGTCGGTGGCGGACGTGGACGTGGCGCGGCTCGGCGACGCGGCCCCGCAGACGCCGCGTCTCCGGCGC
AGCGGCGCCATCCGCCGGGAATGGAGCTTCGAGGACCTCCACGGCGGCAACAACGCCGCCTAAGCACCTATGTAAAATAA
ATAAATAATCTTGGATCCGTCTGGAAAAGCCATGCATGATCCCACAGTTCGAATCAAGATCGACATGCATGCAATGCAAG
TGTGTGTGACTGCCCAGCCAGGCAGCTTTGATCCGATTGGCCTGCATCAATCCTGATAGTATACAACAAATTTGATCATG
GTAAAAGATTCTCCATTCGGTTAACAACAAATTTGTCTACGTGGGGTAGTGGCTCGAGTATATATGTTATG--TATCTGT
ATAGTGCAAGGTAACTGTTCTCTATGGTGCAATGTACATATGAACATTATTCATTGTTGCGAACAATCGTCCATTTTTCA
TACCCAACTTGCTTTGGACCAGTGGCGAATCTACAAAGAAAATGAAGGGTAGGCTCAATTGAACGGCGAGAAAACTAGGC
TCTCTTTTAGAGAGAAAAATTAA-----------------------------------TCAAAATAAGCTCAGAATTTCC
CAAATTACTAAATTT-TTTG-----GCATTAACTAGATTTTTTCTAGTATTTTTGAAAAAT--------A-TATA--TGA
AATT-TTGAATCAAAATTTGAATATATCTTGCAAAATAACCATTATCTCCCCATCTTGTCGTCCATATAAGTG------G
GAGGGATTACACTCACAATAGCAAAGGGAAGGGTATCTAGGTTCATATTAGTTGGGATAGGTTCAGGTTCAGCGTGAAGG
GTACATACATGCATACTCATTTTTTGTACTCT-C-TT-TTTTGC------------------------AAATTGGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGAGGATGGATATTAGTTTGAGGTGCCTGTTCGTTGTGCATGT-------
------------CTC-GATAACATATGTAC----TATTGAGCTGGGATGAAAGTAGTAGTAGTA---CTA----------
-------GTAAAAAAGTATTGTTTATT-GGAGGGCAGGCTTGAGCCTGTTTAAGCCTGTCCAGTAGACTCGCCGCTGCTT
TGGACCAAAGATTGTTGTTGTTGTTGTTGGAATCCCAAAACAAGAAAAATCTGTAGACAGATCCTTTGGGCCTTTC
>chr1D_1
GTTCATGTAAAACAACGTCTTCGTTACAACGTGGTCTAT-----AACCGTCTTGGCTGCTACCTCGTTGTTTGCAGCATG
CCTCGTGTTGCGGCTACACATTGGCCATGTTGCAATTTCAGGCTGAGCTCCCACACACGCGTCAC-------ATGCCTCA
CGCTACCCTCGCCCTTTGCAACATGAGCCATATTGCAAGCATAGGCTCAGCTCCCACACAGACACGTATAACGTGCCTTG
CGCTGCCCGTTTCTTTGAACATGACCTATATATAGGATGATAGTTTGGGACACCTAGGTGCCCATGCTCCTTGACTTTCC
ACCACTCGATTGCATTTAGATGTGTGTTATTGTGATGACTGATTTGGAAATAATAATGATAGAATCACTAATTGGAAACG
TAATTAAGGCAGTGAGAGTAACATGCATGATAACAATTATGTAGTGGGTTAAATAGGAAAGAGAATGCCACTCATGGCAA
TGCTGCATATTTGAGAGATATTAATAGAAATAGGAGAGAGACAAATCAAAATTAATGCGTCATGATTTGTATAGGTATAT
GAATATATTTTTTCATATGTATATTAATAAAAGGTATGGTGTACTCTTCTGTGGGACGCAGTTTTATTTTTTAAAATTAG
GTATATGATACATTGGGTATATGATACCATGAGTATGATACCTAGGACAAATTATGAGTATATAAATTCTGAATATAATA
TTGTGGGTATATCATATTTATTTTTGGTACGTCCTATTTATTATCATCTTGGGGCATATCATATTTATTTTGAGTATACA
AATACCGAGTATGATACCTAGGACAAATTCTTGCGACATGCATGGCAAATTTATTCTGAGGTATCTCTATACTCATTATA
TTTTTGGGTATATACATTGTGTCTCGTTGGTAGGTATTTGATACCTAGAGCATGTGCCAATGATTTCGAGTATATAGGCT
CAGCTCCCACACAGACACGTATAATATGTCTCGCGCTGCCCGTTTCTTTGAACATGACCTATGTTGCAATTGCAACATGA
CCACCCTATTGTAAAATCCGAATGAGCTCCCACAAAGACATGTGTCAGGCACGC-GGGTAGCAGACGACACGACTTGCAA
CCCTAAAAAAAACAAGTTATGTTGCAAAATCTGTCTGAGCTACTACAAGGACATGTGTCAGGCGCGCGCGGACG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GTATACTTTGAAATAAA---TAGAGACACGTGTTGCAGCTATGTCCATCC
AGATTTAGGTGCACACGTCCATAATTAGCCCGCGGAGGCCGGGTGCCGCC---GCATGCATGCAGAGGATAAAATGGATC
CATCCATGGAGCTCACCGGCCGGACGTCCCTCGTTCTGTCCAACTAATTAGTACGCGCGTTTCTGTTCGACCCACGTACC
TGCGCAGGCGCGGCGCGGGGATCGATGAAGGCGAACGGCAGCAAGAGCATGTCGGCGCACCTGACGTGTAACCTGGCGCC
CAGCCGCGGCGCCGGCGCCGGCGACGACGGCCCGCCGCAGCCCCAGACGGCCACCTGCTGCACGGCGCTGCAGCGAGGCT
TCCCGGCGGACGGGAAGCCGACGCAGTCGCGGTTCGCCCCGGTGAGGACGCCCGGCTCGGCGGCCATGATGCTGCACGCC
GACGACAACGGCCCTATAGAGGAGGAGGAGGAGCCGGAGGAGGGGGAGGGGCAG------------CA------------
------GCAGAAGCAGGCCACGACGCCGACCAAGAGGGCGGAA---------------ACGATGATCAAGAAGATGGTGC
GCAAGTGCAAGTCGTCGGTGGCGGACGTGGACGTGGCGCGGCTCGGCGACGGGGCCCCGCAGACGCCGCGTCTCCGGCGC
AGCGGCGCCATCCGCCGGGACTGGAGCTTCGAGGACCTCCGCGGCGGCAACAACGCCGCCTAGGCACCT----AAAATAC
ATAAATAATCTTGGTTCCGTCCGG-AAAGCCATGCTTGATCCCACAGTTCGAATCAAGATCGACATGCATGCGATGCGAG
TGTGTGTGACTGCCCAGCCAGGCAGCTTTGATCCGATTGGCCTGCATCAATGCTGATAGTATACAA-AAATTTGATCATG
GTAAAAGATTCTCCATTCGGTTAACAACAAATTTCTCTGCGTGGGGTAGTGGCTCGTGTATATATGTTATG--TATCTGT
ATAGTGCAAGGTAACTGTTCTCTACGGTGCAATGTACATATGAATGTCATTCATTGTTGCGAATAATCGTCCATTCTTCA
TACCCAACTTGCTTGGGACCA-----------------------------------------------------------
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----------------------------------------------------------------------------
>chr1A_1
GTTCATGTAAAACAACGTCTCCGCTACAACGTGGTCTATG-TTCAACCGTCTCGGCTGCTACCCCGTCCTTTGCAGCATG
CCTCGTGTTGTGACTACACATTGGCCATGTTGCAATTTCAGGCTGAGCTCCCACACACGTGTCACACGCCTCA-------
CGCTACCCTCGTTCTTTGCAACATGAGCCATGTTGCAAGCATAGGCTCAACTCCCACACGGC------------------
--------------------------------------------------------------------------------
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-------CACA---------------------------------------------------------------------
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---CGACTCAGTTGAGCGCTAGTCCTTTTCTAAAAGAAAATCCTTTCTGGTAGTATTATCATAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGGAGGAAC
ATCGTATATATATATCTACTATACTGAAGTGTGTACTTTGAAATAAA---TAGAGACACGTGTTGCAGCTATGCCCATCC
AGATTTAGGTGCACACGTCCATAATTAGCCCGCGGAGGCCGGGTGCCGCCTAAGCATGCATGCAGAGGATAAAATGGACC
CATCCATGGAGCTCACCGGCCGGACGTCCCTCGTTCTGTCCAACTAATTAGTACGCGCGTTTCTGTTCGACACACGTACC
TGCGCAGGCGCGGCGCGGGGATCGATGAAGGCCAACGGCAGCAAGAGCATGTCGGCGTCCCTGACGTGTAACCTGGCGCC
CAGCCGCGGCG------------ACGACGGACCGCCGCAGCCGCAGACGGCCACCTGCTGCACGGCGCTGCAGCGGGGCT
TCCCGGCGGACGGGAAGCCGACGCAGTCGCGGTTCGCCCCGGTGAGGACGCCCGGCTCGGCGGCCATGATGCTGAACGCC
GGCGACAACGGCCCTATA------GAGGAGGAGCCGGAGGAGGGGGAGGGGCAGGCACAGCAGCAGCA------------
------GCAGAAGCAGGCCACGACGCCTACGAAGAGGGCGGCGGCGGCGACGACCAAGACGATGATCAAGAAGATGGTGC
GCAAGTGCAAGTCGTCGGTGGCGGACGTGGACGTGGCGCGGCTCGGCGACGGGGCCCCGCAGACGCCGCGTCTCCGGCGC
AGCGGCGCCATCCGCCGGGACTGGAGCTTCGAGGACCTCCGCGGCGGCAACAACGCCGCCTAGGCACCTGT---------
------------------------AAAAGCCATGCATGATCCCACAGTTCGAATCAAGATCGACATGCATGCAATGCAAG
CGTGTGTGACTGCCCAGCCAGGCAGCTTTGATCCGACTGGCCTGCGTCAATGCTGACAGTATACAACAAATTTGATCATG
GT-------------------TAACAACAAATTTCTCTGCGTGGGGTAGTGGCTCGAGTATATATGTCATGTATATCTGT
ATAGTGCAAGGTAACTGTTCTCTACGGTGCAATGTACATATGAATGTCATTCATTGTTGCGAATAATCGTCCATTCTTCA
TACCCAACTTGCT-------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr7B_1845
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--------TTGTTTCGGACCAGTGGCGAATCTAGGAAGAAAATGAAGGGTAGGCTCAAGTCAACGGCGAGAAAGCTAAGC
TCTCTTTTGAAAAAAA--------CA-------------TGATGTCCTAATCTTGATGTCAAACTAACCTTAGAATTTCC
CAAATTACTACTTAAAAAACATGTAGCATTAACTAGATTTTTTCAAGGATTTTTGAAAAA---------A-TATA--TGA
AATT-TTTAATCAAAATTTGAATTTATCTTGCAACATAACAATTATCTCCACATCCTGTTGTCCATATAAGTT---GTAG
GAGTGATTACAATCACAATAGATAAGGGAAGGGTATCTGGGTTCATATTAGCTAGGATGGGTTCAAGTTCAGCGTGAGAA
GTACATGCATGCATAGTCATTTTTGTA----CTCTTC-TTTTTTTGCAATTAAGTTGCATTGGACACTAAATTAGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGGGGCTGGGCATTCGTTTGTAGTGCCTGTTCGCTGTGCCTGTGTGGTGT
TGTGTGTTGCTACTC-AATAGTAGATGTACTATATATTGAGCTGGGATGAAAGTAGTAGTA-------------------
-----------AAAAGTATTGTTTTTC-GGAGGGTAGGCTTGAGCCTGTTTAAGCCTGTCTAGTAGACTCGCCGCTGTTT
CGGACCA---------------------------------------------------------------------
>chr1B_1846
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---------TGCTTCCGAACAGTGGCGAATCTACAAAGAAAATGAAGGGTAGGCTCAAGTGAACGGCGAGAAAACTAAGC
TCTCTTTTAGAGAGAAAAATTAA-----------------------------------TCAAAATAAGCTCAAAATTTCC
CAAATTACTAATTTT-TTTG-----GCATTAACTAGATTTTTTCTAGTATTTTTGAAAAA---------A-CATA--TGA
AATT-TTGAATCAAAATTTGAATATATCTTGCAAAATAACCATTATCTCCCTATCTTGTCGTCCATATAAGTG------G
GAGGGATTACACTCACAATAGCAAAGGGAAGGGTATCTGGATTCATATTAGTTGGGATAGGTTCAGGTTCAGCGTGAAGG
GTACATACATGCATACTCATTTTTTGTACTCT-C-TT-TTTTGC------------------------AAATTGGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGAGGATGGATATTAGTTTGAGGTGCCTGTTCGTTGTGCATGT-------
------------CTC-GATAACATATGTAC--TATATTGAGCTGGGATGAAAGTAGTAGTAGTA---CTA----------
-------GTAAAAAAGTATTGTTTATT-GGAGGGCAGGCTTGAGCCTGTTTAAGCTTGTCCAGTAGACTCGCCGCTGCTT
----------------------------------------------------------------------------
>chr2D_1852
GGAG----------------------------------------------------------------------------
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-------------------CAGTGGCGAATCTAGGAAGAAAATGAAGGGTAGGCTCAAGTCAACGGCGAAAAAACTAAAC
TCTCTTTTGGAGAAAAAAATTGACCA-------------TGATGTCCTAATCTTGTTGTCAAAATAGGTTCAGAATTTCC
CAAATTACT--ATTT-TTTT-----GCATTAACTAGATTTTTTCTAGTATTTTTGAACAA---------A-TATA--TAA
AATT-TTGAACCAAAATTTGAATTTATCTTGCAAAATAACCATTATCTCCCCATCTTGTTGTGCATATAATTT---GGAG
GAGGGATTACAATCACAATAGCAAAGGGAAGGGTGTCTGGGTTCATATTAGTTGGGATAGGTTCAGGTTCAGCGTGAGGG
ATACATGCATG-ATACTCATTTTTTGTACTCCTA-TT-CTTTTTTGCAAATAAGTTGCATTGGACACTAAATTGGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGAGGCTGGGCATTCGTTTGAGGTGCCTGTTCGCTGTGCATGT-------
------------CTG-GATAATATATGTAC----TATTGAGCTGGGATGAAAGTAGTAGTAGTAGTACTA----------
-------GTAAAAAAGTATTGTTTTTT-GGAGAGCAGGCTTGAGCCTGTTTAAGCCTGTGTAGTAGACTCGCCACTGC--
----------------------------------------------------------------------------
>chr2A_1855
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------------------CCAGTGACGAATCTAGGAAGAAAATGAAGGGTAGGCTCAAATCAACGGCGAGAAAACTAAGC
TCCCTTTTGGAGAAAAAA-TTAACCA-------------TGATGTCCTAATCTTGTTGTCAAAATAAGTTCAAA--TTCC
CAAATTACT--ATTT-TTTT-----GCATTAACTAGATTTTTTCTAGTATTTTTGAAAAA---------AA---------
---AATTGAACCAAAATTTGAATTTATCTTGCAGAATAATCATTATCTCCCCATATTGTTGTACATATAGGTT---GAAG
GAGGGGTTACAATCACAATAGCAAAGGAAAGGGTATCCGGGTTCATATTAGTTGGGATAGGTTCAGGTTCAGCGTGAGGG
GTACATGCATGCATACTCATTTTTTGTACTCCTC-TT-CTTTTTTCCAAATAAGTTGCATTGAACACTAAATTGGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGAGGCTGGGCATTCGTTTGAGGTGCCTGTTCGCTGTGCATGT-------
------------CTC-GATAATATATGTAC----TATTGAGCTGGGATGAAAGTAGTAGTAGTAGTACTA----------
-------TTAAAAAAATATTGTTTTTT-GGAGGGCAGGCTTGAGCCTCTTTAAGCCTGTCTAGTAGACTCGCCGCTGC--
----------------------------------------------------------------------------
>chr5D_1856
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-------------------CAGTGGTGAATCTAGAAAGAAAATGAATGGTAGGCTCAAGTGAATGGCCAGAAAACTAAGC
TATCTTTTGGAGAGAAAAATTAACCA-------------TG--------------TTGTCAAAATAAGCTCAGAATTCCC
CGAATTACTAT-TTT-TTTG-----GCATTAACTAGATTTTTTATAGTATTTTTGAAAAA---------AATATA--TGA
AATT-TTGAATCAAAATTTGCATATATCTTGTAAAATAACCATTATCTCCCCATCTTGTCGTCCATATAAGTT---G---
GAGGGATTACAATCACAATGGCAAAGGGAAGGGTATCTGGGTTCCTATTAGTTGGGATAGGTTTAGGTTCAGCGTGAGGG
ATACATACATGCATACTCATTTTTTGTACTCTTC-TT-TTTTGC------------------------AAATTGGTTAAC
AGTACATGAACTAGTAATTACACAGTAGATGGAGGTTGGACATTCGTTTGAGGTGCCTGTTCGTTGTGCATGT-------
------------CTT-CATAACATATGTAC----TATTGAGCTGGGATGAAAGTAGTAGTTACACAGTAGATGGAGGTTG
GACATTCGTAAAAAAGTATTGTCTTTT-GTAGGGTAGGATTGAGCCTGTTTAAGCCTGTCTAGTAGACTCGCCGCTG---
----------------------------------------------------------------------------
>chr2B_1856
--------------------------------------------------------------------------------
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-------------------CAGTGGCGAATCTAGGAAGAAAATGAAGGGTAGGCTCAAGTCAATGGCGAGAAAACTAAGC
TCTCTTTTGGAGAGAAAAATTAACCA-------------TGATGTCCTAATCTTGTTGTCAAAATAAGTTCAGAATTTCC
TAAATTACTAT-TTT-TTGG-----GCATTAACTAGATTTTTTCTAGTATTTTTGAAAAA---------A-TATATATGA
AATT-TTTAACCAAATTTTGAATTTTTCTTGCAAAATAACCATTATCTCCCCATCTTGTTGTACATATAAGTTGGAG---
GAGGGATTACAATCACAATAGCAAAGGGAAGGGTATCTGGGCTCATATTAGCTGCGATAGGTTCAGGTTCAGCGTGAGGG
GTACATGCATGCAACTCA--------------------TTTTTTTGCCAATAAGTTGCATTGGACACTAAATTAGTTAAC
AGTACATGAACTAGTAGTTACACAGTAGATGGAGGCTGGGCATTCGTTT-AGGTGCCTGTTCGCTGTGCATGT-------
------------CTC-GATAATATATGTAC----TATTGAGCTGGGATGAAGTAGC-AGTA---GTACTA----------
-------GTAAAAAAGGATTGTTTTTT-GGAGGGCAGGCTTGAGCCTCTTTAAGTCTGTTTAGTAGACTCGCCGCTGC--
----------------------------------------------------------------------------
>chr2B_1856
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-------------------CAGTGGCGAATCAAGGAAGAAAATGAAGGGTAGGCTTAAGTCAACGGCGAGAAAACTAAAC
TCTCTTTTGAAGAAAAAATTAAACATGATGCCTTAATCTGG--------------TTGTCAAAATAAGCTTAGAACTTCC
CAAATTAGTAT-TTTTTTTG-----GCATTAACTAGATTTTTTCTAGGATTTTTTTAAAA---------A-CATA--TGA
AATT-TTGAACAAAAATTTGAATTTATCTTGCAAAATAACCATTATCTCTCTATTTTGTTGTCCATATAAGTT---GGAG
GAGGGATTACAATCACAATAGCAAAGGGAAGGGTATCTGGGTTCATATTACATGGGATAGGTTCAGGTTTAGCGTGAGGG
GTACATGCATGCATACTCATATTTTGTA----TCTTT-TTTTTTTGCAAATAAGTTGCATTGGACACTAAATTGGTTAAC
GGTACATGAACTAGTAATTACACAATAATTGGAGGCTGGGCATTCATTTGAGATGCCTGTCCGCTGTGCATGT-------
------------CTC-AATAATATATGTTC----TATTGAGCTGGGATGAAAGTAGTAGTA---GTACTA----------
-------GTAAAAAAGTATTGTTTTTT-GGAGGGCAGGCTTGAGCCTGTTTAAGCCTGTCTAGTAAACTCGCCGCTGCT-
----------------------------------------------------------------------------
>chr6A_1856
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-------------------CAGTGGCGAATCTAGGAAGAAAATGAAGGGTAGGCTCAAATCAACGGCGAGAAAACTAAGC
TCTCTTTTGGAGAAAAAATTAACCATGATGTCCTAATCTTG--------------TTGTCAAAATAAGTTCAAT--TTCC
CAAATTACT--ATTT-T-TT-----GCATTAACTAGATTTTTTCTAGTATTTTTGAAAAA---------AA---------
---A-TTGAACCAAATTTTGAATTTATCTTGCAAAATAATCATTATCTCCCCATCTTGTTGTACATATAAGTT---GAAG
GAGGGGTTACAATCACAATAGCAAAGGAAAGGGTATCTGGGTTCATATTAGTTGGGATAGGTTCAGGTTCAGCGTGAGGG
GTACATGCATGCATACTCATTTTTTGTACTCCTC-TT-CTTTTTTCCAAATAAGTTGGATTGAACACTAAATTGGTTAAC
AATACATGAACTAGTAATTACACAGTAGATGGAGGCTGTGCATTCGTTTGAGGTGCCTGTTCGCTGTGCATGT-------
------------CTC-GATAATATATGTAC----TATTGAGCTGGGATGAAAGTAGTAGTAGTACTACTA----------
-------TTAAAAAGGTATTGTTTTTT-GGAGGGCAGGCTTGAGCCTGTTTAAGCCTGTCTAGTAGACTCGCTGCTG---
----------------------------------------------------------------------------
>chr4B_1940
--------------------------------------------------------------------------------
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----------------------------------------------------------TCAAAATAAGCTCGGAATTTTC
CAAATTACTAC-TTACAAG-ATGTAGCATTAACTGGATTTTTTCTAGGATTTTTGAAAAT----------ATATA--TCT
AATT-TTGAATCAAAATTTGAATTTATCTTGCAAAATAACCATTATCTCCCCATCTTGTTGTCCATATAAGGT---GGAG
GAGGGATTACAATCACAATAGTTAAGGGAAGGGTATCTGGGTTCATATTAGCTGGGATAGGTTCACGTTCAGCGTGAGGA
GTACGTGCATGCATACTCATTTTTGTA----CTC-TT-TTTTTTCGCAAATAAGTTGTATTGTACACTAAATTAGTTAAC
TGTACATGAACTAGTAATTACACAGTAGATGGATGCTGGG-ATTCGTTTGTGGTGCATGTTCGCTGTGCATGTGTGGTGT
TGTGTGTTTGCTCTC-GATCGTAGATGTAC----CATTGAGCTGGGATGAAAGTATTAGTAGTAG---------------
--------TAAAAAAATATTGTTTTTT-GGAGGGCAGGCTTGAGCCTGTTTAAGCCTGTCCAGTAGACTCGCCGCTG---
----------------------------------------------------------------------------
>chr6D_1940
--------------------------------------------------------------------------------
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----------------------------------------------------------TCAAAATAAGCTCAGAATTTCC
CAAATTACTAC-TTAAAA-CATGTAGCATTAACTAGATTTTTTATAGGAGTGTTGAAAAAGTATATGAAAA---------
---T-TTGTACCAAAATTTAATTTTATCTTGCAAAATAACCATTATCTCCCCATCTTGTTGTCCATATAAGTT---GGAG
GAGGGATTACAATCACAATAGTTAAGGGAAGGGAATTTGGGTTCATATTAGCTGGGATAGATTCAGGTTTAGCGTGAGGA
ATACATGCATGCACACTCATTTTTTTA----TTC-TTCTTTTTTTGCAAATAAGTTGCGTTGGGCACTAAATTCGTTAGC
AGTACATGAACGAGTAATTACACAGTTGATGCAGGCTGGGCATTCGTTTGTGGTGCCTGTAC-CTGCGCATGCGTGGTGT
TGTGTGTTTGCTACATGATAGTAGATGTAC----TAATGAGCTGGGATGAAAGTAGTAATAGCAGTAGT-----------
----------AAAAAATATTGTTTTTCTGGAGGGTAAGCTTGAGCCTGTTTAAGCCTGTCTACTAGACTCGCCGCTG---
----------------------------------------------------------------------------
>SNPs
----------------S----S------------------S-------S---------------S---------------
-----------S------------------------------------S-------------------------------
-----------------------------------------S-S---S---S---------S------------------
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------------S-----------S-S-S-----S-----S---S---------------S-------------S-----
--SS----------------------------------------S-------S-S---S---------------------
-S-------------------------------S-------S--S--------------------------SS-SSSSSS
SSS----S---S----S-----S-S-----------------S---S-S-SS---S-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
S-S--------------S--S----S-----------------S---SSS------------------------------
--------------------------------------S------S----------------------------------
---------------------------S----------------------S----------S------------------
------------------------------------------------------------------------S-------
--------------------S-----------------------------------------------------------
----------------------------------------S---------------------------------------
-----------------------------------------S--------------------------SSSSSSSSSSSS
SSSSSS---------------S----------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------S-------------------S---------------------S------S-SS------S
--------------S------S----------------------------------------------------------
---------------------------------------------------S----------------------------
----------------------------------S---S-----------------------------------------
------------------------S-------------------SS-S---------------S-----------S----
--------------S-------------------------------------------S------------------S--
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1639
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CATAATTAGCCCGCGGAGGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2655
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TGGACCAGTGGCGAATCTAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
