>input_sequence_78138
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----------------------------------------------ATGCAGAACAACGCGACAGAGGTTCCTGCCCAAG
GCCATGGCCTTGGGCAGGTGAGCAACAACGACATCAGGCTGTCCGGCTCCGTCATTGGGGGCACTTTCGTCGTTGTCGTT
GTTTTGGTGGGCGGCGCTATTCTTCTGCACCGATTCTTCAGGTTTTTTTACTGGGCATGCTGGTCTTTGCCATCTCACGC
TAGCAGTAGGTTCAGGCGATCTGTCATGATATTAGCTCATTACAAATTTCAGTTTTCAACTCCACTGCCCGCCTCTGCAG
GTTCTACAAGCTGGAGAAAGCACTGCGAGCGCTGAAGATCCCCCCCTCCAGGTTCCAACCGGAGGGGGCAATCAACTCAG
TGTGCACCATCTGCATTGCAGATTTCCGCCCCCGCGCGCGCGTGGCAGTGCTCCCCACGTGCGGGCACGTCTTCCACCGC
CACTGCCTCCGGGAGGTGGTGGCGGGGCAGAGCCCACGCTGCCCGCTCTGTTGGGCAGCTCTGCTGTGA-----------
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>chr1B_1_TraesCS1B01G327600
ATGCCTTAACGCTCAGGCAGTGAGGCGCCCCCCAGCGCCTCGCCTCGCCTTATTCCTTAACGCTTAGGGGCTGTTTGGTT
GGAGGCCTGACGAGATTTGCTGGCCTGACAACCTCCCCGAGTTGTGTTTGAAGTCTGTTTGGTTGGTGCCTGAAGTTCTG
GACATGTCCCTGGCCTGGAGCTCACATGCAGTTCATTAGGCTGGCAAGATCACAGGCAGCTTCATTAGCCTGTTTCAGGC
CGATGGAATCGGAGGCCTGAGCTCCAGGCAGACGTTGTTTTCAATTTTTTAGCACCTTATGTTGTACTTTCGGTCAACTC
AGCCACCCAATCTACCCATTTAATATTTAAGAATTTGTCTCAGGCCAGGCCACCAGCAGTGTAGCAACCAAACGCCGCAT
GCGCACAGCTGCCTAGCAGGCAAGAATCCATCTTTTCCCATGGGCCTGTCAAGCACGAAATTTGGTCAGGCACGGAGCTC
AGGGCATGAACCAAACAGCCCCTTAACCCAGAATGGCTGAAAGTGGCCAAGCCAAGTCTCATAGCAGCCACTCTCCATAC
AGACTCCACTCGCAGCTAACATATGTGCTGCTTTATTGCAACCACGGCTACAATGATTCACACTTACAACATTCAGACCT
ACATACATCTTAAACTTCACATCTGCAAACAAAGTGCCTAAAGCTGAAAGATCATAGTCGTTACTTGTTATTGCTTCCTT
CAGCGTTGTGGAATCTGTTTCAAATATGACTTGTTGGTAGCCCAAATGAGTAGCAGTAATAGTTGCTTGCTGAAGGTCCA
AAGCTTCAGCATGCAATGGACTGGACACATGATTCAGATTCCCAGCACCTGCCGCCAGGAGCGTTCCTTGGTCATTCCTG
ATTCCCAGCACCTGCAATGACATGTCAA----------------------------------------------------
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-------------------------------CT-TTGAAGTGAAAATGTTTTCGAATACTTCCTTTGGGTCAT--GACAT
TCGACTAGCTTTAGTCTGACGTGTTCACATGTCGTCGCAGGTCAGCATGCAGAACAACGCGACAGAGGTTCCTGCCCAAG
GCCATGGCCTTGGGCAGGTGAGCAACAACGACATCAGGCTGTCCGGCTCCGTCATTGGGGGCACTTTCGTCGTTGTCGTT
GTTTTGGTGGGCGGCGCTATTCTTCTGCACCGATTCTTCAGGTTTTTTTACTGGGCATGCTGGTCTTTGCCATCTCACGC
TAGCAGTAGGTTCAGGCGATCTGTCATGATATTAGCTCATTACAAATTTCAGTTTTCAACTCCACTGCCCGCCTCTGCAG
GTTCTACAAGCTGGAGAAAGCACTGCGAGCGCTGAAGATCCCCCCCTCCAGGTTCCAACCGGAGGGGGCAATCAACTCAG
TGTGCACCATCTGCATTGCAGATTTCCGCCCCCGCGCGCGCGTGGCAGTGCTCCCCACGTGCGGGCACGTCTTCCACCGC
CACTGCCTCCGGGAGGTGGTGGCGGGGCAGAGCCCACGCTGCCCGCTCTGTTGGGCAGCTCTGCTGTGAAGGTGAGCTGT
TTTTTATTTTGTGTGCTTGCTTCTGTGCATTTCTCCATGAGGGCACCCTTGATGTGGAGCACCTCAATTATGGAATTATA
ATGCTTATCCCTAAACTGAATGGGGCTAAAAATTAACTCAATATCGGCCCATATTCTTGCTGAGATGCCCTTATAAACTG
GTTACCAAGGTGTTGGATAATTGAGTTACTGTTTTTGCTGATACCCTGTTTAGTAGGCATCAGAATGCATTTATAAAAAA
TCGTAATATCATGGATGGCATCCTAACATTGCATGAAGTCTTGCATCATAGTCAGGCAAAGAAAAAAGTAGGCATTGTCC
TAAAGCTTGATTTTGAAAAAGCATACGACAAAATGAAATCGGATTTCCTCCTTGATTGTCTTGCTATGCGTGGTTTTATT
TAATGACAAGTGGTGCAGTTGGATTAGGAAAATTCTGTATAATGGGACAGTTAGCATTAAGCTTAATAATGAAACGGGTC
CTTATTTTCAAAGTCATAAAGGGGTGCGCCAAGGCGACCCCTTGTCTCCTTTCTTGTTCAATTTGGCCGTAGAATGCCTC
TTGAAAATGATTTTTAATGCTCAGAAAGAACGGCTCCTGAATGGGTTGGCACCTGATCTTATTGATAAGGGGTAGCCATG
TTGCTGTATGCGGACGATACAGTTCTATGTATTGAACATGACCCTGATAAGGCTGTTAATGTGAAGCTACTCCTTCATAT
GTTTGACCTCATGTCTGGCCAAAAAATCAACTTCCTGAAGAGTGAGATACTTTGTGTTGGCGGCGATGATAATATCGTTA
AATTCTATGCTGATCTCTTCAATTGCCAGATTGGCCACTTTGCTATGAAATACTTAGGTGTCCCAGTCAGCTTTTCCACT
TTGAGAAGTTTGGGCTGGGATTTTGTTGATACAAAATTCCTTAAACGTTGCGAGGCATGGATTGGTAATTCTGCTACCTC
GGGTGGCAGATTAACCCTGCTTAACTCTT
>chr1B_516
GCG-----------------------------------------------------------------------------
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--------------------------------------GAAAGTGGCCAAGCCAGGTCTCATAGCAGCCACTCTCCATAC
AGACTCCACTCACAGCTAATATATGTGCTGCTTTATTACAATCACGGCTACAATGATCCACACTTACAACATTCAGACCT
ACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCATAGTTGCTACATGTTATTGCTTCCTT
CAGCGTTGTGGAATCTGTTTCAAATATCACTTGTTGGTAGCCCAAATGAGTAGCAGTACTAGTTGCTTGCTGAAGGGCCA
AAGCTTCAGTATGCAATGGACTGGAGACATGCCTCAGTTTCCCTACACCTGCCGCCAGGAGCGTTCCTTGGTCATTCCTG
ATGGTGAAACCCCAGCCTCCTGATTGTGTATCTTCAATAAAGGATCCATCTGTGTTTATCTTGAGAA-TCCCATCGGAGG
TGGCTTCCACTTATGTTACTCTTGCTTGCTCATCTCTT----CTTCGTCTTGTCCTTCATGCACATGTTCAGATGATAGT
CAATTGAGGATGATACTTCCTGTATACTTCTAGTGGGTTCATCCTTATTAGCTTTATTTCTTTCATGCCACCATAACCAT
AAAAGTAAGCAAACTTTCAAGCACTCGGTTTTCGTTAAAGTGAAAATGTTTTTGAAAACTTCCTTTGGGTCAT--GACAT
TCGACTAGCTTTAGTCTGATGTGTTCA-----------------------------------------------------
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>chr7B_519
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--------------------------------------GAAAGTGGCCAAGCCAGGTCGCATAGCAGCCACTCTCCATAC
AGACTCCACTCGCAGCTAATATATGTGCTGCTTTATTACAATCACGGCTACAATAATCCACACTTACAACATTCAGACCT
ACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCATAGTTGCTACTTGCTATTGCTTCCTT
CAGTGTTGTGGAATCTGTTTCAAATATCACTTGTTGGCAGCCCAAATGAGTAGCAGTAATAGTTGCTTGCTGAAGGGCCA
AAGCTTCAGCATGCAATGGACTGGAGACATGACTCAGTTTCCCTGCACCTGCCGCCAGGAGCGTTCCTTGGTCATTCCTG
ATGGTGAAACCCCAGCCTCCTGATTGTGTATCTTCAATAAAGGATCCATCTGTGTTTATCTTGAGAATTCCCATCGGAGG
TGGCTTCCACTTATGTTCCTCTTGCTTGCTCATCTCTTCCGCCTTCGTCTTGTCCTTCATGCACATGTTCAGATGATAGT
CAATTGAGGATGATACTTCCTGTATACTTCTAGTGGGTTCATCCTTATTAGCTTTATTTCTTTCATGCCACCATAACCAT
AAAAGTAAGCAAACTTTCAAGCACTCGGTTTTTGTTAAAGTGAAAATGTTTTCGAAAACTTCCTTTGGGTCAT--GACAT
TCGACTAGCTTTAGTCTGATGTGTTCA-----------------------------------------------------
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>chr2D_578
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-----------------AAAATATGTGCTGCTTTATTGCAACCACGGCTACAATGATTCACACTTACAACATTCAGACCT
ACATACATCTTAAACTTCACATCTGTAAACAAAGTGCCTAAAGCTGAAAGATCGTAGTTGTTACTTGTTATTGCTTCCTT
CAGCGTTGTGGAATCTGTTTCAAATATCACTTGTTGGCAGCCCAAATGAGTGGCAGTAATAGTTGCTTGCTGAATGGCCA
AAGCTTCAGCATGTAATGGACTGGAGACATGATTCAGATTTCCAGCACCTGCCGCCAGGAGCGTTCCTTGGTCATTCCTG
ATGGTGAAACCCAA-CCTTCTGAGTGTGTTTCTCCAGTAAAGGATCCATCTGTGTTTATCTTGAGAATTCCCTTCGGAGG
TGGCTTCCACTTATGTTTTGCTTGCTTCCTCATCTCTTCCTTCTTTGTCTTGTCCTTCATGCA--------------AGT
CAATTGAAGATGATACTTCCTGTATACATCTTGTGGGTTCATCCTTATTAGCGTTGTTTCTTTCATGCCACCATAACCAT
TAAAGTAAGCAAACTTTCAAGCATTCGGTTTCT-TTAAAGTGAAAATGTTTTCGAATACTTCCTTTGGGTCATATGACAT
TCGACTAACTTTAGTCTGATGTGTTCA-----------------------------------------------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S-------------------------
-------------------S------------------------------------------------------------
-------------------------S--------------------------------S---------------------
---------------------------S------------------------------------------------S---
-------------------------S------------------------------------------------------
--SSSS-SSS--SSSSS-SSSSS--SSS----------------------------------------------------
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------------------------------------S-------------------------------------------
-------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_447
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---------------------------CCATCTTTTCCCATGGGCCT---------------------------------
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>reverse_2397
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----------------------------------------------------------------------------CATG
TTGCTGTATGCGGACG----------------------------------------------------------------
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