>input_sequence_78135
--------------------------------------------------------------------------------
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------------------------------------------------ATGGCGGGACTCAAGCCCAGCGTCAACCTCTT
CGCACTCCTCGACAGCAATGATCCCGGCGACAAACTCGTGATCCACCTCGACGACGCCAATGCCAAACAAGATGCGCCGG
CGGC---CAAGCACAAGAAGACGGCGACGCCGGCTGCCAGTCTTACCAAGGATCTATTCGCCCAGGCATACCCTACCGCA
CGGGATTACGTAATCAGGAAAAATCAGCTGGAGAGACAGGCCCGGGCCAGGGGCAGCTGGGCGGAGGCGGA------GGC
AAGAGCGAAGGCAAACAATGGAGTTTCTGGTGATGACAAGAGCCCAGGGGCTTCGGCCGACAGCAGCAAGGTACAAGACG
GTAG----------------------------------------------------------------------------
-----------ATTCGAAGTTCCAAAGAGGCAGCAACGCAGCATGTCGCGTTACCACTACCAGGCGGCCCCTGCAGAAGT
CGTGGAGGCGCCGCCGGCTCCCCAGCAGGCTGCTCCGCCGTCGCCACCAAGCATAGATGACATCAACGAGTTCCCTTCGT
TGAAGTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr7D_1_TraesCS7D01G505100
AACGCGACTTACCGTGCCGGCCTAGGTCGCGCGACGCATATGTGCCATGCACCATTTCAGCGCCCTTAAGTGCCGATTAG
GAGGTCTCTTCCGCATCGTTTCCTATTCGTCGCGTCACGCACGGTGGATATGCAAACGCATACCCCCAGCACACCGCACG
CAACTTGGCCTAGGCCATTGTGGCTTTTTTTTAACATAGTACAGCCGCAAGCGCTCATATACACGCACATATACTCACCC
TATGAACGCATACACACACTTTACCCCTATGAGCACCTCCGAAAGACTGAGCCGACATATCATGTCGGAAATCCTGAAAT
AAATTCAGGAATAAATGCGAGCACCACGATTTGAACCTTGATAGGCTGGGATACCACAGTCACCATCCAACCACAGGTTG
GTTCGCGCCATTGTGGCTTTTTTTACGTGTCTTTCTTCCATTGGGGTTTAGGAAGGTTCTAGAACCTCCCATAAACTGGG
TTTTCTTTTCTATTTTTTGTTTTT-----------ACCAGCTTTTTACGTTTTTTTCATATCTTTTTATG------TTTT
AATTTCTAAATTCATGGACATTTTTTATTTTGAAAATGTTTTTCATGCATGTGCCGTCGTGTCCATGCGTGTGCCTTGTG
ACCGAAAATAGAATACAACATTTGGAAAGGGAGC--TTCCACGCATGATTCCCAATTTTTTACTTAGTAGATGCCAAGCT
ATCATCACGTGCTCCTATACGCTGTAGACACCGGAACTAGAAGCCCGGCCGGACTGTTGCAACCAAGTCTGAGTCCCATC
AGTAGATCGTGTCCGAGTCCTTCTCCATCTCCCCTTCATACAGTGTGCGGACCCAGCA----------------------
--------------------------------------CTAATTGGACTCGGATTGTACGAGAGCGCATCAATTGTCAAG
CCATAT--CTATATATACACGCCTGGTGGGCAGCCTCCAAGTCACGAATCGCACA---TCAGCAAGCAAAACGAGCAAGT
CC----CACGCTCGATCCGCCGCAGCGGGTTTTGCTTACCCGATCGACATGGCGGGACTCAAGCCCAGCGTCAACCTCTT
CGCACTCCTCGACAGCAATGATCCCGGCGACAAACTCGTGATCCACCTCGACGACGCCAATGCCAAACAAGATGCGCCGG
CGGC---CAAGCACAAGAAGACGGCGACGCCGGCTGCCAGTCTTACCAAGGATCTATTCGCCCAGGCATACCCTACCGCA
CGGGATTACGTAATCAGGAAAAATCAGCTGGAGAGACAGGCCCGGGCCAGGGGCAGCTGGGCGGAGGCGGA------GGC
AAGAGCGAAGGCAAACAATGGAGTTTCTGGTGATGACAAGAGCCCAGGGGCTTCGGCCGACAGCAGCAAGGTACAAGACG
GTAG----------------------------------------------------------------------------
-----------ATTCGAAGTTCCAAAGAGGCAGCAACGCAGCATGTCGCGTTACCACTACCAGGCGGCCCCTGCAGAAGT
CGTGGAGGCGCCGCCGGCTCCCCAGCAGGCTGCTCCGCCGTCGCCACCAAGCATAGATGACATCAACGAGTTCCCTTCGT
TGAAGTAGTGCTAG--CTAGACCATGTATAGCTTTG----CTTCAACATATTTGTAGACTTTCCTTTCGTTCGTCGGCTT
GCTTTTTACGATATGTTTTGTGTGGTATACAATGTTCGGTTTTTAAACAAGTGTACTCGATCCACTATTATCTTGTTATT
GAGTTCTTAATTAAATTTTTCT-CGTATTAAATATCCTTGGATCTCTATCTCTATTCTATCGATGAC----TTAGAGCAG
AATAATGGATAAAAATACTATATTAAGCACCTAGGTGCGTTTGGGAGTGATGTCTTTTTAAAGTTTTTTCGGGAATACTG
TGGTTTTTAAAAAAA-CTTCAGTATTAGATACTTTGAGGTGTTTGGCTTAAAAAATTACTGTGGTTTAAGATACCGTGGT
ATCTCTAATACTGTAGTGTTTCTACAGTATTTTAAAAAGAGGTCATGACCACTTTT-TTTAAA---ACC-AAGCCAAGAG
AAGTCGTTGGG------------CCCGTTGATGTCCAGATTAAAAAAATCTGATGGGAGCCTCCGACTCCTCTATCTGTT
GCGTATA-TTTTAAACAATTCGCTGGTTGCCGATTTCTTTCTGGATTCTGGGCTTCTGGTAGTGCTGCACGTC---TCGA
ACCAAGCTAGCATGTGGAGTAGATTGTTGGTCACTGAAGCACACACTCATACAC-------AGGAGGCT-----------
-GGCAGGGCTGCATGCAGCCGGCATCCGTTAGCACACGCTGATTAATCCGGTCGTGTTGCTA----GGTGTAGCTGAGTT
AGCAC-TGCTGATTGATTTGGCCACATAGTAAAGTTATCAGTAAAAA---AGCTGCAGCAAAACAATAGCAGCCAAACAT
TGCGGTGGACTTGTCAAAACTGAGAAAAACTACGTTTTTT-AGAAACCAGAGTATTTGTTGCCCACCCATCAGAATACTG
TGGTTTTAGAA-TACTTTGGTTTTCCCAAAACTATACTGCCAAACTAAGCTTCACGATTTAAAAAGATTTATTCGTACAT
TAAAAAAAGGGTACACTGCATTATAAAAAA
>chr7A_8
-------CTTACCGTGCCGGCCTAGGTCGCACGACGCATATGTGCCATGCACTGTTTCAGCGCCTTAAAGCGCCGATTAG
GAGGTCTCTTCCGCGTCATTTCCTATTCATCGTGTCACGTGCGGTGGATAGGCAAACGCATACCCCCAGCACACCGCACG
CAACTTGGTCTGGCG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CATTGTGGCTTTTTTTATGTGTCTCTCTTCGACTGG------------TTTTAGAACCTCTCCAGATCAAGA
ATACCCATGCATTCGCCTAACCCAGGGTTTTTCCGACCAGCTTTTTACGTTTTCTATATCTTTTTTATGCTACTTATTTT
AATTTCTAAATTCATGAATATTTTTGATTTCGCGGATGCTTTTCATGCATGTGCCTTCGTGTCCGTGCGTGTGCCTTGTG
ACAGAAAATAGGATACAACATTTGAAAATGGAGAGTTTCCATGCATGATTCCCACGTTTTGG---------TGCCAAGCT
ATCATCACGTACTCTTATA---CGTTGACACCGGAACTTGAAGCCCCGCCGGAGTGTTGCAACCAAGTCGGAGTCCCGTT
AGTAGGTTGTGTCCGAGTTCTTCTCCATCTCCACTTCGTACAATGTGCGGAGCCAGCC----------------------
------CTAGTTCGTCCCCTAACTAATATCTACCGTATCTAATTGGACTCGGATTGAAGGAGAGCGCGTCAATCAAGC--
---TATATATACC--TACACGCCTGCTGGGCAGCCTCCAAGTCACGAATCC-----------------------------
------------------------------------------ATCGACATGGCGGGACTGAAGCCCAGCGTCAACCTCTT
CGCGCTCCTCGACCGCAACGATCCCGGCGACAAACTCGTGACCGACCTCGACGACGCCAATGCCAAACAAGATGCGACGG
CGGCGGCCAAGCACAAGAAGACGGCGGCGCCGGCTGCCAGTCTTACCAAGGATCTATTGGCCCAGGCATACCCTACCGCA
CGGGATTACGTGATCAGGAAAAATCAGCTGGAGAGACGGGCCAGGGCCGAGGCC---------GAGGCGGC------GGC
AAGGGCAAAGACGAACATCGGAGTTTCCGGCGGTGATAAGAGCGCGGGGGCTTCGGCCGACAGCAGCAAGGTACAAGATG
GAGCAAGGCGAGGCATCAGATACAGCAATA---------ACTACTACAACAACGGAGCATCGAGGAAGCAGCAACCCGGC
ATGCCGGGAAAGTTTGGAGCTCCACAGAGGCAGCTACCCAACATGCCGCTGAACGG------GGCGCCCCCTGCAGAAGG
CGTGGAGGCGCCGCCGCCACC---------------------------GAGCCTAGATGACACCAACGAGTTCCCTTCGT
TGAAGTAGTGCTAGCTCTAGACGA--------TAGCTGTCCTTCAACATAT-----------------------------
-----------------TTGTCTAGTATACAATGTTCGGTTTTTAAACAAGTGTACTCGATCGACTATTATCTTGTTATT
GAGTTCTTAGTTAATTTTTTTCACGTATTAAATATCCTTGGATCTCTATCTCTATCCTATCAATGGCTAAATTAGAGCAG
AATCATGGATAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr7B_708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------ACGTACTCCTATACGTTGTAGACACGGCAACTTGAAGCCCGGCCGGACTGTTGCAACCAAGTCGGAGTCCCATT
AGTAGACTGTGTCCGAGTCCTT---CATCTCCACTTCGTACAGTGTGCGGACCCAGCA----------------------
------CTA--------------------------------ATTGGACTCGGATTGAACGAGAGCGCGTCAATCAACC--
---TAT--ATACG--TACAGGCCTGGTGGGCAGCCTCCAAGTCACGAATCGCACATCATCAGCAAGCAAAGCGAGCAAGT
CCCACGCTCGATCGATCCGCCGCACCAGGTTTTGCTTACCCGATCGACATGGCGGGACTGAAGCCCAGCGTCAACCTCTT
CGCGCTCCTCGACAGCAACGACCCCGGCGACAAACTCGTGATCGACCTCCACGATGACAATGCCGAGCAAGATGCGC---
CGGCGGCCAAGCACAAGAAGACGGCGACGCCGGCTGCCAGTCTTACCAAGGACCTATTCGCCCAGGCATACCCTACCGCA
CGGGATTACGTAATCAGAAAAAATCAGCTGGAGAGACAAGCCCGGGCCAGGGCCA---GGGCGGAGGCCGAGGCCAAGGC
AAGGGCAAAGGCGAACAACGGAGTTTCCGGCGATGACAAGAGCGCGGGTGCTTCGGCTGACAGTAGCAAGGTACAAGGCG
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr7B_719
--------------------------------------------------------------------------------
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-----------------TACGTCGTAGACACCGGAAGTTGAAGCCCGGCCGGACTGTTGCAACCAAGTCGGAGGA-----
-------TGTGTCCTAGTCCTTCTCCATCTCCACTTCGTACAAT-TGCAGACCCAGCCCTAGCTCTTCCCGTAATGAAGC
AACTATCTA--------------------------------ATTGGACTCGGACTGTACGAG--CGCGTCAATCAAGC--
---TAT--CTATATATACAAGCCTGGTGGGCAGCCTCCAAGTCACGAACAGGAAAGT-----------------------
-C----CTCGCTCGATCCGCCGCAGCAGGATTTGCTTACCCGATCGACATGGCGGGACTGAAGCCCAGCGTCAACCTCTT
CGCGCTCCTCGACAGCAATGACCCCGGGGACAAGCTCGTGACCGACCTCGACGACGCCCATGCCAAACAAGATGCGC---
CGGCGGCCAAGCACAAGAAGACGGCGACGCCGGCTGCCAGTCTTACCAAGGATCTATTCGCCCAGGCCTACCCTACCGCA
CGGGACTACATAATCAGGAAAAATCAGCTGGAGAGACAGGCTTGCGCCAGGGCCA---GGGCGGAGGCCGG------GGC
AAGAGCGAAGGCAAACAATGGAGTTTCTGGTGATGACAGGAGCCCAGGGGCTTCGGCTGATAGCAGCAAGGTACAAGACG
GTAG----------------------------------------------------------------------------
-----------ATTCGAAGTTCCAAAGAGGCAGCAACGCAATATGTCGCGTTACCCCTACCAGGCGGCCCCTGCAGAAGT
CGTGGAGGCGCCGCCGGCTCCCCAACAGGCTGCTCCGCCGTCGCCACCAAGCATAGATGACATCAACGAGTTCCCTTCGT
TGAAGTAGTGCTAG--CTAGACGA--------TTTG----CTTCAACATATGTGTAGACTTTCCATTTATTCGTCGGCTT
GCTTTTTATGATATGTTTTGTGTGGTATACAATGTTCGGTTTTTAAACAAGTGTACTCGATCGACTATTATCTTGTTATT
GAAGTCTTAATTAAAA-------------AAAAATCCTTGGATCTCAATCTCTATCCTATCAATGGCTAAATAAGAGCAG
AATAATGGATAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr7B_968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCCGCGGCAGCAGGATTCGCTTACCCGATCGACATGGCGGGACTCAAGCCCAGCGTCAACCTCTT
CGCGCTCCTCGACCGCAATGATCCCGGGGACAAGCTCGTTATCGACCTCGACGACGCCAATTCCAAGCAAGATGCGC---
CGGCGGCCAAGCACAAGAAGACGGCGACGCCGGCTGCCAGTCTTACCAAGGATCTATTCGCCCAGGCATACCCTACCGCA
CGTGATTACGTAATCAGGAAAAATCAGCTGGAGAGACAGGCCCGGGCCAGGGCCA---GGGCGGAGGCCGAGGCGGCTGC
AAGGGCAAAG------------GTTTCCGGCGATGATAAGAACGCGGGGGCTTCGGCCGACAGCAGCAAGGTACAAGATG
GAGCAAGGCAAGGCAGATACTACAACAACAACAACAACTACTACTACAACAACGGAGCATCGAGGAAGCAGCAACCCGGC
ATGCCGGGCAAATTCGGAGCTCCACAGAGGCAGCAACCCAACATGCCGCTGAACGG------GGCGGCACCTGCAGAAGG
CGTGGAGGCGCCGCCGGCACCCCAGCAGGCTCCTCGGCCACCGCCACCGAGCCTAGATGACACCAACGAGTTTCCTTCCT
TGAAGTAGTGCAAC------ACAA--------TAGCTGCCCTTCAA-ATATTTGTAC-----------------------
GCTTTTTACGATATGC-TTGTGTAGTATACAATGTTCGGTTTTTAAACAAGTGTA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr3D_1743
--------------------------------------------------------------------------------
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-----------------CTAAATTAAGCTTAG-GGTGCGTTTGGGAGTGATGTATTTTTAAAGTTTTTCCGGGAATACTG
TGGTTTCTAAAAAAA-CTTCGGTATTAAATACTTTGAGGTGTTTGGCTTAAAAAATTACAGTGGTTTAAGATATTGTGGT
ATCTCTAATACTGTAGTTTTTCTACAGTATTTCAAAAAGAGGTCATGACCACTTTT-TTTAAA---ACC-GAGCCAAGAG
AAGTCGTTGGGGAGAGCACTTAGCCCGTTGATGTCCAGATTAG-AAAATCTGATCGCTGCCTCCGACTCCT--ATCTGTT
GCGTATATTTTTAAACAATTCGCTGGTTGCCGATTACTTTCTGGATTCTGGGCTTCTGGTAGTGCTGCACGTC---TCGA
ACCAAGCTAGCCTGTGGAGTAGACTGTTGGTCACTGAAGCACACACTCATACAC-------AGGAGGCTGACCTCGTGCA
TGGCAGGGCTGCATGCAGCCGGCATCCGTTAGCACACGCTGATTAATCTGGTCGTGTTGCTA----GGTGTAGCTGAGTT
AGCAC-TGCTGATTGATTTGGCCATGTAGTAAAGTTATCAGTAAAAA---AGCTGCAGCAAAACAATAGCAGCCAAACAC
TGCGGTGGACTTGTCAAAACTGAGAAAAACTACGTTTTTTTAGAAACCAGAGTATTTGTTGCCCACCCATCAGAATACTG
TGGTTTTAGAA-TACTTTGGTTTGCCCAAAACTATACTGCCAAACTAA--------------------------------
------------------------------
>chr3A_1749
TAAGTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------CTTAG-GGTGCATTTGGGAGTGATGTATTTTTAAAGTTTTTTCGGGAATACTA
TGGTTTCTAAAAAAAACTTTAGTATTAAATACTTTGAGGTGTTTGGCTTAAAAAATTACAGTGGTGTAAGATACTGTGGC
ATCTCTAATACTGTAGTTTTTCTACAGTATTTTAAAAAGAGGCCATGACCACTTTT-TTTTAA---AACTGAGCCAAGAG
AAGTCGTTGGGGAGAGCACTTAGCCCGTTGATGTCCAGACTAG-AAAATCTGATCGCTGCCTCCGACTCCTCTATCTGTT
GCTTATA-TTTTAAACAATTCGCTGGTTGTCGATTACTTTCTGGATTCTGGGCTTCTGGTAGTGCTGCACGTC---TCGA
ACCAAGCTAGCCTATGGAGTAGATTGTTGGTCATTGAAGCACACACTCATACAC-------AGGAGGCTAACCTCGTGCA
TGGCAGGGCTGCATGCAGCCAGCATCCGTTAGCACACGCTGATTAATCCGGTCGTGTTGCTA----GGTGTAGCTGAGTT
AGCAC-TGCTGATTGATTTGGCCATGTAGTAAAGTTATCAGTAAAAA---AGCTACAGCAAAACAATAGCAGCCAAACAC
TACGCTGGACTTGTCAAAACTGAGAAAAACTATGTTTTTT-GAAAACCAGAGTATTTGTTTCCCACCCATCAGAATACTG
TGGTTTTAAAA-TACTTTGGTTTTTCCAAAACTATACTGCCAAACTAGGCCTCA--------------------------
------------------------------
>chr3D_1759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------GGTGCGTTTGGGCGTGATGTCTTTTTAAAGTTTTTTCGGGAATACTG
TGGTTTCTAAAAAACA-TTCTGTATTAAATACTTTGAGGTGTTTGTCTTAAAAAATCACAGTGGTTTAAGATACTGTGGT
ATCTCTAATACTGTAGTTTTTCTACAGTATTTTAAAAAGAGGTCATGAGCACTTTTATTTAAA---ATC-GAGCCAAGAG
AAGTCGTTGGGGAGAGCACTTAGCTCATTGATGTCCAGATTAG-AAAATATGATCGCTGCCTCCGACGCCTCTATCTATT
GCGTATA-TTTTAAACAATTCGCTGGTTGCCGATTACTTTCTGGATTCTGGGCTTCTGGTAGTGTTGCACGTC---TCGA
ACCAAG-------GTGGAGTAGATTGTTGGTCACTGAAGCACACACTCATACAC-------AGGAGGCTGACCTCGTGCA
TGGCAGGGCTGCATGCAGCCGGCATCCGTTAGCACACGCTGATTAATCCGGTCGCGCTGCTA----GGTGTAGCTGAGTT
AGCAC-TGCTGATTTATTTGGCCATGTAGTAAAGTTATCAGTAAAAA---AGCTGCAGCGAAACAATAGCAGACAAACAC
TGCGGTGGACTTGTCAAAACTGAGAAAAACTACTTTTTTT-TAAAACCAGAGTATTTGTTGCCCACCCATAATAATACTA
TGGTTTTAGAATTACTTTGGTTTTCCCAAAACTATATTGCCAAACTAAGCCTTCAC------------------------
------------------------------
>chr1D_1759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------GGTGCGTTTGGGAGTGATGTATTTTTAAAGATTTTTCGGGAATACTG
TGGTTTCTAAAAAAA-CTTCGGTATTAAATACTTTGAGGTGCTTGGCTTAAAAAATTACAGTGGTTTAAGATACTGTGGT
ATCTCTAATACTGTAGTTTTTCTGCAGTATTTTAAAAAGAGGGCATGACCACTTTT-TTTAAA---ACC-GGGCCAAGAG
AAGTCGTTGGGGAGAGCACATAGCCCGTTGATGTCCAGATTAG-AAAATATGATCGCTGCCTCCGACTCCTCTATCTGTT
GCATATA-TTTTAAACAATTCGCTGGTTGCCGATTACTTTCTGGATTCTGGGCTTCTGGTAGTGTTGCACGTC---TTGA
ACCAAGCTAGCCTGTGGAGTAGATTGTTGGTCATTGAAGTACACACTCATACAC-------AGGAGGCTAACCTCGTGCA
TGGCAGGGCTGCATGCAGCCGGCATCCGTTAACACACGCTGATTAATCCGGTCGTGTTGCTA----GGTGTAGCTGAGTT
AGCAC-TGCTGATTGATTTGGCCATGTAGTAAAGTTATCAGTAAAAA---AGCTGCAGCAAAACAATAGCAGCCAAACAC
TGCGGTGGACTTGTCAAAACTGAGAAAAACTATGTTTTTT-AGAAACCTGAGTATTTGTTGTCCACCCATCAGAATACTG
CGGTTTTAGAA-TACTTTGGTTTTCCCAAAACTATACTGCCAAACTAAGC------------------------------
------------------------------
>chr4A_1759
--------------------------------------------------------------------------------
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---------------------------------GGTGCGTTTGGGAGTGATGTATTTTTAAAGTTTTTTTGGGAATATTG
TGGTTTCTAAAAAAAACTTCAGTATTAAATACTTTGAGGTGTTTGGCTTAAAAAATTAAAGTGGTCTAAGATACTGTGGT
ATCTCTAATACTGTAGTTTTTCTACAGTATTTTAAAAAGAGGTCATGATCACTTTT-TTTAAA---ACC-AAGCCAAGAG
AAGTCGTTGGGGAGAGCACTTCGCCCATTGATGTCCAGATTAG-AAAATCTGATGGATGCCTCCGACTCCTCTATCTGTT
GCGTATA-TTTTAAACAATTCGCTGGTTGCTGGTTACTTTCTGGATTCTGGGCTTCTAGTAGTGCTGCACGTC---TCGA
ACCAAGCTAGCATGTGGAGTAAATTGTTGGTCATTGAAGCACACACTCATACATGATACATAGGAGGCTGACATCGTGCA
TGGCAGGGCTGCATGCAGCCAGCATCCGTTAGCACACGCTGATTAATCCGGTCGTGTTGCTA----TGTGTAGCTGAGTT
AGCAC-TGCTGATTGATTTGGCCATGTAGTAAAGTTATCAGTCAAAA---AGCTGCAGCAAAACAATAGCAGCCAAACAC
TGCGGTGGACTTGTCAAAATTGAGAAAAACTATGTTTTTT-AGAA-----------------------------------
--------------------------------------------------------------------------------
------------------------------
>chr4A_1759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------GGTGCGTTTGGGAGTGAAGTATTTT-GCTGTTTTTTTGGAAATATTG
TGCTTTCTAAAAA-AACTTTGCTATTAAATACTTTCAGAAGTTTGGCTTAAAAA-TTATAGTAGTTTAAGATAATGTGGT
ATCTCTAATACTGTAGTTTTTCTGCAGTATTTTAGAAAGAGGTCCTAACCACTTTT-TTTTAA---ACC-GAGCCAAGAG
AAGCAGTTGGGGAGAGCGTTTAGCCCGTTGACGTGCAGAACGG-AAAACCTGATCATTGCGTCCAA-----CTATCTATT
GCGTATA-TTTTAAATGATTCGCTGGTTGCCAATC----TCAGGGTTCTGGGGTTCTTGTAGTGCTGCACGTC---TCGA
ACCAAGCTAGCATTTGGAGTAGATTGTTGGTCATTGGAGCACATGCTCATACAC-------GGGAGGTTGAACTTATGCA
TGGCAGGGCTGCATGCAGCCGACATCCGTTAGCAAATGCTGATTAATCTGGCCACGTTGCTATTTAGGTGTAGCTGAGTT
AGCAC-TGCTGATTAATTTGGCCATGTAGTA--GTTATTAAT-AAAC---AACTGCAGCAAAACAATACCAGCCAAACAC
TGCGGTGGACTTGACAAAACTGAAAACAAATACATTTTAT-AGAAACCAGAGTATTTGTTGCCCACACATCAGAATATTG
TGGTTCTAGAA-TACTTTGGTTTTTCCAAAACCATACTGCCAAACTAAGC------------------------------
------------------------------
>chr5A_1759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GGTGCCTTTGGGAGTGATGTATTTTTAAAGTTTTTTGGAGAATACTG
TGGTTTCTAAAAA-AACTTTAGTATTAAATACTTTGAGGTGTTTGGCTTAAAAAGTTACAGTGGTCTAAGATACTGTGGT
ATCTCTAATACTGTAGTTTCTCTACAGTATTTTAAAAAGAGGTCATGACCACTTTT-TTAAAACCGATC-GAGCCAAGAG
AAGTCGTTGGGGAGAGCACTTAGCCCGTTGATGTCCAGACTAG-AAAATCTGATCGCTGCCTCCGACTCCTCTATCTGTT
GCTTATA-TTTTAAACAATTCGCTGGTTGCCGATTACTTTCTGGATTCTGGGCTTCTGGTAGTGCTGCAGGTC---TCGA
ACCAAGCTAGCCTGTGGAGTAGATTGTTGGTCATTGAAGCACACACTCATACAC-------AGGAGGCTGACCTCGTGCA
TGGTAGGGCGGCATGCAGCCGGCATCCGTTAGCACACGCTGATTAATCCGGTCGTGTTGCTA----GGTGTAGCTGAGTT
GGCAC-TGCCGATTGATTTGGCCATGTAGTAAGGTTATCAGTAAAAA---AGCTACAGCAAAACAATAGCAGCCAAACAC
TACGCTGGACTTTTCAAAACTGGGAAAAACTATGTTTTTT-AGAAACCAGAGTATATGT---------------------
--------------------------------------------------------------------------------
------------------------------
>chr6D_1759
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GGTGCGTTTGGGAGTGAAGTATTTTTGAAGTTTTTTTAGGAATACTG
TGGTTTTT-AAAA-AACTTTGGTATTAAATACTTTGTGGTGTTTGCCTTAGAATATTACAGTGGTTTAAGATACTGTGGT
ATCTTTAATACTGTAGTTTTTCTGCAGTATTTGAAAAAGAGGTCTTGACCACTTTT-TTCTAA---ACC-GAGCCGAGAG
AAGTCGTTGGGGAGAAAGCTTAGCCTGTTAACTTGCAGATCAG-AAAATCTGATCGCTGTCTCCGACTTCTCTATCTGTT
GCGTATA-TTTTAAATGATTCGCTGGTTGCCGATTACTTTCTGGGTTTTGGGCTTCTGGCAGTGCTGCACGTCGACTCGA
ACCAAGC-AGCATGTGGAGTAGATTGTTGGCCATTGGAGCGCACACTCATACAC-------AGGATGCTAACCTCATGCA
TGGCAGGGCTGCATGCAGCCGGCATCCGTTAGCACACGCTGATTAATCCAGTTGTGTTGTTGTTTGGGGGTAGCTGACTT
AGCACATGCTAATTGATTTGGCCATGTAGTA--GTTATCAGT-AAAAAAAAACTACATCAAAACAATACCAGCCAAACAC
TACGGTGGACTTGACAAAACTGAGAAAAACTACGTTTTTT-AGAAACCACAATATTTGTTGCCCACACATCAGAATACTG
TGGTTTTAGAA-TACTTTGGTTTTTCCAAAACTATACTGCCAAACT----------------------------------
------------------------------
>SNPs
S-S-SSS-----------------------S---------------------SS----------S-S---S---------
--------------S--S----------S---S------SS---------S-----------------------------
--------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----------------S------S-----S-S---SSSSSSSSSSSS--S---------S-SSS-S-SS-S
S-SS-SS-S-SS-SSSS-SSSSSS-----------------------------S-SS--S-S----SSSS----------
----------------S-S------S----S-SSS---S----------------S--------S---------------
--S--------S------------S---S----S-------S------------SS----SSSSSSSSSSS---------
----------S----------S----------------S------------------------------S---------S
-------S------------------------S----S------------------------------------------
-------------------------------------------------------------------S-----SSS-SSS
SSS-------------------------------------------------------------------S---------
-------S------------------S-----------------------------------------------------
---S---------------------------------------S------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--SSS----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------S------------------------
--------------------------------------------------------------------------------
----------------------S-SSSSSSSS--------------------------------S--SS-----------
--------------------------------------------------------------S-----------------
--------------------SS---------------------------------S-----S---S--------------
---------------SS---S-------SSSSS-----------------------------------------------
---------------------------S-------------------------------S--------------S-----
-----------------S--------------------------------------------------------------
------------------------------------------SS------------SS----------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------SS-----------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_298
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------CCGAAAGACTGAGCCGACAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------
>reverse_1748
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGTTCGTCGGCTT
GCTTTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
