>input_sequence_78128
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGGCTTCCGGCA---GGCTCTGCTCCGT
GCTGCTCGCCCTGCTGGTCGTCGTCCTGGCCACGCGGCCGGCGGCGGTGTCCGGAGCGTCGGCGCACCTGCACTTCTACA
TGCACGACGTGCTGACTGGCCCGGCGCCGACGGCGGTGCAGGTGATGGACGGGCCACGCAGCCACTTCGGCGACACGATC
GTGATCGACGACGCGCTGACGGAGACCTCGTCGGCGACGTCGACGGGCGTGGGGCGCGCGCAGGGGCAGTACGTGTGGGC
CTCGAGGGGGAACCCGGAGCTGCTGGTCACCATGGACGTGGTGCTCACGTCGGGCCCCTACGCGGGGTCCTCCGTGACGG
TGGTGGGCCGGGACGACATCGGCGCGGCGGTGCAGGAGCTCTCGGTGGTCGGCGGCACCGGGCAGTTCAGGATGGCTACA
GGGTACGTGCTGTGGAAGACCGTCCGGCTGGACCACCCCAACGCCGTCCTTGAGCTCGATGTCTTCGTCAACCCGTGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr7B_1_TraesCS7B01G017300
GGTTTTTGCAGCAGTGGAGATTATTGACTAAAGAAGAGGACCTTCATGCTTTCGACGACATGCTATCCAAGATGAAATCT
ACGGCGTCTGCTCTTCTCCGGCGCTCTTTACGGACGGCTTCCTGATTGCATCTTTTCGGTCTGTAGTTTAGGCTGGCCTG
CGTGCCATGTGAGGCTGCTGGCCTTGTATTGCTACTTTAACTTCCTTGGTGTTTTAACTTGGTTGGGATGCTGGTTGATG
GTGATGTACGCTGCCTGGTGGCTTTATCTATAAAGTCGGGCTCCTGCCTTTTCTCTAAAAAAAAGAACTCCGGTCTTGCA
CAACTTGACTGTATTTTCTGCTTTACTTATGAAACATGTTTGTTCAATCTCTCAAACCCGTGTTTCTTCTCCTACCAACT
CCTGCATGTTTTGTTTCGTTGGATCAGTACATCAGTTACTCCCACTGCTGGTTTGGTTTGGGATTATTGGACATAGATAG
TCGGGATTCTTCTTCTCCGGCGAGGTCCGGCATTGCTCCCAAAAAGTGGCCGACACGTGAAAAAATTTCAAGCACCTGAG
AAATAGCAAAGCCGTTGAACATGTCATGTGTGCGAATGGATATAGGCGTTCCGCCGTGCCGGGAATCGATGGCACTGATG
ACTTTCAGTGTGTGACCGTGCCGGGATAGATCTAGATCTGCAGCTAGTGATGCACAGATCACACCACACCATGGAGGGAC
CATACATGTGCGCTTCATCGACAATGAAGGAACACAACATAAACGCAGTCCTGCTCGGAAGACGACGCATCAACTGCTGC
TCTCAATACA-AACAAACCAGACATGATCATTGAGAAATTAT---CATACAGACCATACACCTCAGCAACATTATCAACA
ATAGGCGAGCAATCAATTCCTCACATTTCTTG----TTTGTGTATATATACAGTACATAAGGATCCAGTAGACTAATCAG
AAGACATCACACAGACACACACTTGAGCCTTGAGCT---AGCTCTCCTGTCATGGCTTCCGGCA---GGCTCTGCTCCGT
GCTGCTCGCCCTGCTGGTCGTCGTCCTGGCCACGCGGCCGGCGGCGGTGTCCGGAGCGTCGGCGCACCTGCACTTCTACA
TGCACGACGTGCTGACTGGCCCGGCGCCGACGGCGGTGCAGGTGATGGACGGGCCACGCAGCCACTTCGGCGACACGATC
GTGATCGACGACGCGCTGACGGAGACCTCGTCGGCGACGTCGACGGGCGTGGGGCGCGCGCAGGGGCAGTACGTGTGGGC
CTCGAGGGGGAACCCGGAGCTGCTGGTCACCATGGACGTGGTGCTCACGTCGGGCCCCTACGCGGGGTCCTCCGTGACGG
TGGTGGGCCGGGACGACATCGGCGCGGCGGTGCAGGAGCTCTCGGTGGTCGGCGGCACCGGGCAGTTCAGGATGGCTACA
GGGTACGTGCTGTGGAAGACCGTCCGGCTGGACCACCCCAACGCCGTCCTTGAGCTCGATGTCTTCGTCAACCCGTGACG
GACCGCCATGAGCCATGACTGGATGTGCATGTTGATCTGTCCCACTTCTCCCCTACTATTTGCTCCGTCTATACGCATGC
CTCCTCTGCTACAATAGTGTTGGATATGTACGTGCAAATGTTGTTCCTGAAATATGTAATATGTTGCCCGGCTTTGGTGA
TTGTGATCTAAATACACATTAGGTAAATGACAGTCAACTGAATTTCAAATTGGGGTGAGTCGATTTTCGAGAGTTCACTG
GAGGGAAGGAAGGAGAAGAAAGGGACTCGTCGAAGGGCTACCCCATTATCTATCTCAGGGTTTAAGGTGGGGCGGTGGTG
CGGCGATGGTGGGGTTTCGTCGAGAAAAAACTCGACGCGGGGGGCCTACAGGGATATGGCCGGGGGCGGCGGAAGACCGG
CGGTTAGGGCGTTCAGGGGAGGGCGGGGCGGCGAAGCGGTCACGGGAGTGCCGCGGGCCGCGGGTGGCGGGGGGTTTGGC
CGGCGGCCATGCGGTGGTTTGGGAAAAAGGAAGAAGAAGGCCTGTGCGCCGTTGGATTTCATCGTATGGTTGAAAATGTT
CGACTAACCCGAATTTGAAAGTCAAGCGACCTACGTCTAGCCACGCCCATCTAAATAGCGGCAATGCTACATCAACGGAC
TCTTACATGCGTTTTACGGGGTGAATTTGAGTTGGCCAAGTGTGATTGGACAAAGGAGAGGGCGGGGCCCCACCACCCTG
AAAATCAGGGGGGTAAAGTTTAGTTGAAAGGAAGGGTCTGTAAAAGCCCCGTATTAGGCCCCTCGATGTAGCATTTTTGT
CTAAATATACTCCGTTTCGATCTGTTGAGAACTGGTGAATAATCGAATCATTTTGTACTAGTAAAATATGCAGCAGTTGT
GCCCACGGAGTAGAGTGGAATTGTTCTCGCTTCCGAAATATGCGCACATGTGCTAGTAAAATATGCAGCCGTTGCTTCCT
TCGGTGCCAAACACGTCTACTCTTGCAAAAAAATAATA
>chr3A_716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGGAC
CATGAATGCGCGCTCCGTCGACAGTGAAGAATGGCAACATAAACGCGGTCCGGTCCAGAAGACGACGCATCAACTGCTGC
CCTCAATACA-AACAAACCAGGCATGATCATTGAGAAATTATTGTCACACCGACCATACACCTCAGCAACATTATCACCA
AGATGGA----------TCCTCATTTTTCTCTTGCGTGCGTGTATATATACAGCACACAAAGATGCAGAAAC--------
AAGACATCACACAGGCACACACTTGAGCTTGCAC---TGAGCTCTCTTGCCATGGCTTCCGGCGGCTGGCTCTGCTCCGC
GCTGCTCGCTT---TGCTCGTCGTCCTGGCCGCGCGGCCGGCGGCGGTGTCGGGGGCGTCGGCGCACCTGCACTTCTACA
TGCACGACGTGCTGACCGGCCCGGCGCCGACGGCGGTGCAGGTGCTGGACGGCCCGCGCGGCCACTTCGGCGACACTATC
GTCATCGACGACGCGCTCACGGCCACCTCGTCCGCGGCGTCGCCGGCCGTGGGGCGCGCGCAGGGGCGGTACATCTGGGC
GTCCAAGGGGAACCCGGAGCTGCTGGTCACCATGGAGGTGCTCCTCACGTCCGGCCCCTACGCGGGGTCCTCCGTCACGG
TGGTCGGCCGGGACGACATCGGCGCGGCGGTGCGGGAGCTGTCGGTGGTCGGCGGCACGGGCCAGTTCAGGATGGCCACA
GGCTACGTGCTGTGGAAGACCGTCCGGCTCGACCACCCCAACGCCGTCCTCGAGCTCGACGTCTTCGTCAACCCGTGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr3B_716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGGAC
CATGCATGCGCGCTCCATCGACAGTGAAGAATGGCAACATAAACGCGGTCAGATTCAGAAGCCGACGCATCAACCGCTGC
TCTCAATACA-AACAAACCAGGCATGATCATTGAGAAATTATTGTCATACCGACCATACACCTCAGCAACATTATCAGCA
AGATGCAG----------------ATTTCTTC----TGCGTGTATATATACAGTACACAAAGATGCAGAAAT--------
AAGACATTACACAGGCACACACTTGAGCTTGCAC---TGAGCTCTCTTGCCATGGCTTCCGGTAGCTGGCTCTGCTCCGT
GCTCCTGGCTCTGCTGGC---CGTCCTGGCCGCGCGGCCGGCGGCGGTGTCGGGGGCGTCGGCGCACCTGCACTTCTACA
TGCACGACGTGCTGACCGGCCCGGCGCCGACGGCAGTGCAGGTGCTGGACGGCCCGCGCGGCCACTTCGGCGACACCATC
GTCATCGACGACGCGCTCACGGCCACCTCGTCCGCGGCGTCGGCGGGCGTGGGGCGCGCGCAGGGGCGGTACGTGTGGGC
GTCCAAGGGGAACCCGGAGCTGCTGGTCACCATGGAGGTGCTCCTCACGTCCGGCCCCTACGCGGGCTCCTCCGTCACGG
TGGTGGGCCGGGACGACATCGGCGCCGCCGTGCGGGAGCTGTCGGTGATCGGCGGCACGGGCCAGTTCAGGATGGCCAGA
GGCTACGTGCTGTGGAAGACCGTCCGGCTCGACCACCCCAACGCCGTCCTCGAGCTCGACGTCTTCGTCAACCCGTGAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr3D_716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GGGAC
CATGCATGCGCGCTCCATCGATAGTGAAGGATGGCAACATAAACGCGGTCCGATCCAGAAGACGACGCATCAACTGCTGC
CCTCAATACATAACAAACCACACATGATCATTGAGAAATTATTGTCACACCGACCATACACCTCAGCAACATTATCAGCA
AGATGCAG----------------ATTTCTTC----TGCGTGTATATATAGAGTACACAAGGATGCAGAAAT--------
CAGACATTACACAGGCACACACTTGAGTCTTGACTCTTGAGCTCTCTTGCCATGGCTTCCGGCGGCCGGCTCTGCTCCAT
GCTGCTCGCGCTGCTGGC---CGTCCTGGCCGCGCGGCCGGCGGCGGTGGCGGGGGCGTCGGCGCACCTGCACTTCTACA
TGCACGACGTGCTGACCGGCCCGGCGCCGACGGCGGTGCAGGTGCTGGACGGCCCGCGCGGCCACTTCGGCGACACCATC
GTCATCGACGACGCGCTCACGGCCACCTCCTCCGCGGCGTCGGCGGGCGTGGGGCGCGCGCAGGGGCGCTACGTCTGGGC
GTCCAAGGGGAACCCGGAGCTGCTGGTCACCATGGAGGTGCTCCTCACGTCCGGCCCCTACGCGGGCTCCTCCGTCACGG
TGGTCGGCCGGGACGACATCGGCGCCGCCGTGCGGGAGCTGTCCGTGGTCGGCGGCACGGGCCAGTTCAGGATGGCCACG
GGCTACGTGCTCTGGAAGACCGTCCGGCTCGACCACCCCAACGCCGTCCTCGAGCTCGACGTCTTCGTCAACCCGTGAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---S----S-----S--------S-------SSS------------S----S-S--S-----------------------
--------------------------------------------------S--------------------------S--
-S-S--SSSSSSSSSSS------S-------S-----SS------------------S------S---S-SSSSSSSSSS
--------------S------------------SSS----------S--S------------------------------
---------S---------------------S-------------------S--S-------------------------
----------------S---------------------------S-------S--S---S----------------S---
--S--------------S----SS--------S---S-----S------------------------S------------
S--S-S------------------------------S---S-S--------S-----------------------S----
---------------------------------S------S-----------------S--S--------------S---
--S--------------------------S--------------------S--------S-------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TCCCACTGCTGGTTTGGTTT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_2139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGGCAATGCTACATCAACGG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
