>input_sequence_78080
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--------------------------------------------------------ATGGTTATTTCCCACTCCCACTCT
CAGCCTCTACTAAACCACCGTACCGAGGAGCACAATCACGGCGATCACCTCTCGGGACCGCAGGGTAGCAGTAGTGATGG
CTCCTCGAGCCTGCCCAGGGGCGGCAAGCTGCGGACAAAATCCTGCGAAGACATGCTCGGCCGTATACGACGAGGTGGCA
TCGACGAAACCAAGGACGACTTCAAGCGCCGTGAGACGGATCCAGCCTACGTGAGCTTTGAGGACATGTTGGCATCCAAG
GAGTTCCGGGAGGGCATTAGCCGTCCGGCGCCGGAGGCTGGGATCACGCATCCGCTTGTGAGGACGGCGTCGCGGCTGTA
CACATCTACGGCCCACCCACGGCAGCGTCGCCGATCTCCGGGGCCGCTAGGGACTCGCCGTGGCGGCACCATGTACCGTT
TTGTGAAGAAGTACATCTGCCCTTGCTTGGACTTGGTCGGCAGAGCTTTGGGTTGCATGCCAAGCATGACGGCTCATTGA
--------------------------------------------------------------------------------
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------------------------------------------------
>chr2A_1_TraesCS2A01G296900
TGAACTACTAAGCATTTCTGGTGAGTTCATCGCGCAATTTTATTTAAACTCAATGCCGTGGCAGATCCAGAAAAAATACA
AAAAAAATT-CAACCATTGAACATTTTTGTAAATATACAACGTTCAATTTTTAAATAGATAAAGAACATTTTTGGATACA
TGCTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATACATAAAATAA-TT
TT-GTAAATATACACTGAACA-TTTTTAACTACACATTGAACACTTTTGTGATATAAGCTGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTTTATAAAAACCGTTTTTTAC--AATTGTGGACAAGTTTTGAAATCATGAACAAAATTTGGAATTCCGAACATTT
CTTAAAACATAGAATGAAAGTAAAAACGAAAAAACATAAAAGAAAGGG-AAAGAAAAAATAAAATAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAAGCAGTAAAAGA-AAAAA-ACATGA-AATAAATCGGTCCAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCACGAAATGGGCCGGCCCGTTTGCACTGCTCGCTCGT
GCGCTTCAGCGGAAGCGGAGCAGATGGACGCACGCGAGCGTCAAATAGGGTTCGCCGGTTCCTACCCTCTCGTTGGACAA
TCCCTACCAGTCAGGAGCTTTCTTCACAGGCCGATGTGTTCGAAGGCCCACGTGAGAGACCGTCTCGCACGTAAACCGTC
TCGTATGTAAACTTGGTTACGGGTATATAGGGGCTCGCGCAACGACTTTCCACAATCGCCGCCTCCTCCCGAATCCTACT
TCCGATCGCCGTCGACAGCCTACCTTACGCCGTCTTCTCCCGATCTCGACGTGGTCATGGTTATTTCCCACTCCCACTCT
CAGCCTCTACTAAACCACCGTACCGAGGAGCACAATCACGGCGATCACCTCTCGGGACCGCAGGGTAGCAGTAGTGATGG
CTCCTCGAGCCTGCCCAGGGGCGGCAAGCTGCGGACAAAATCCTGCGAAGACATGCTCGGCCGTATACGACGAGGTGGCA
TCGACGAAACCAAGGACGACTTCAAGCGCCGTGAGACGGATCCAGCCTACGTGAGCTTTGAGGACATGTTGGCATCCAAG
GAGTTCCGGGAGGGCATTAGCCGTCCGGCGCCGGAGGCTGGGATCACGCATCCGCTTGTGAGGACGGCGTCGCGGCTGTA
CACATCTACGGCCCACCCACGGCAGCGTCGCCGATCTCCGGGGCCGCTAGGGACTCGCCGTGGCGGCACCATGTACCGTT
TTGTGAAGAAGTACATCTGCCCTTGCTTGGACTTGGTCGGCAGAGCTTTGGGTTGCATGCCAAGCATGACGGCTCATTGA
TTGGTTCAATGGATTATAATTCGTTTTATGATCTCTATAATAAGGGCAATGTTTGCTTTAGTCATGCTTAAAATATTTTG
T-------TCGTTAGTCATGTGAAGCTGACGTTTAGTTAGCGTAGTTAGTTGCCTGAACACATACATTGTTGATTCTCGT
GGAGTAGAT-----------TCGTTTCTTTCTAAAGATTCTAGCCGGCTTGTTAAAGGGTTCGCTTG---AGCGTTTGTG
TTCTTGTAAAACGGCCACGACCGTCGCTCCCTGTGATGGTACAATGGTTCATCCACCCTCGCTAGTGTTCATCCACCCTC
GCTAGTTCCTCTCCTCTCGCAAAAAAAAAAAATAATACTAAGAATAATTAAAGGCTGCTACAAATCAACCGTTGATTTGT
TACAAAATTAAGCCGCCTCCACAGCCATCTGATTCAGATGCTTCTAGCCGCAGGATCGGGCGACACCACGCATCTCCCGT
GTCAGCACCACGCAGCAGCTCCCATGGCTGCACCAATGGCTTCGGTTGACGCTGCATTCCAACCTCGCCGGAGCTTCCAA
CGACGGCCGCGGCGCTTCACTGCAACTTCGACGGTGCTTCATTGCAACCTCACCGGAGCTCCAACGATT-----------
-----------------------------------------------------GCCGCGACGC-TTCACTACAGCTTCAA
CGGCGCTTCATTGCAACCTCGCCGGAGCTTCGACGGCCACCGCGAA----------------------------------
------------------------------GCTTCACTGCAGTTTCGACAACGCTTCATTGCAACCTCGCCGGAGCTCCA
ACAACCGCCACGGCACTTCACTGCAGCTCCGGTGGCGCTTCATTGCAGCCCCGCCGCACCTGATGGGAGACGGCGAAGCT
TCACTGCAGCACAACGCGACGGCAACGGGGTGCTGCGATGAATCACGCGGT-----------------------------
-----------------------------------GGCGAC--------------------------------GGAGCTC
TAGCAGCCCGATGTTGCGCTGCTCCTCTC--CTCAGCCTCCCGATTGCAGCATGTGCGACGAGTGGTGACCCGTCTCCGA
CTCCGTCGTCATCTGCAGCTCCGGTGGCCACTACCACGCAGCCTCGCG
>chr2A_1
TGAGCTACTAAGCATTTCTGGTTAGTTGATCGCGCAATTTTATTTAAACTCAATGCCGTGACAGATCCAGAAAAAATAC-
AAAAAAATT-CAACCATTGAACATTTTTGTAAATATACAACATTCAATTTTTAAATAGACAAAGAACATTTTTGGATACA
TGCTGACCAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTTAATATTTTGTTAAATATACATAAAATATTTT
TT-GTAAATATACACTGAACATTTTTTAACTACACATTGAACACTTTTGTGATATAAGCCGTACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTT-ATAAAAACC-TTTTTTAC--TATTGTGGACAAGTTTTGAAATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACATAGAATGAATATAAAAACGAAAAA-CATAAAAGAAAAGG-AAAGAAAAAATAAATTAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTCAAAGAAAAAAA-ACATGA-AAAAAATCGGTCCAGGGAACTCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCACGAAATGGGCCGGCCCGTTTGCACTGCTCGCTCGT
GCGCTTCAGCGAAAGCGGAGCAGATGGACGCACGCGAGCGTCAAATAGGGTTCGCC------------------------
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------------------------------------------------
>chr5A_1
TGAACTACTAAGCATTTCTGGTGAGTTCATCGCGCAATTTTATTTAAACTCAATGCCGTGACAGATCCAGAAAAAATACA
AAAAAAATT-CAACCATTGAACATTTTTGTAAATATACAACGTTCAATTTTTAAATAGGTAAAGAACATTTTTGGATACA
TGCTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATACATAAAATAT-TT
TT-GTAAATATACACTGAAAATTTTTTAATTACACATTGAACACTTTTGTGATATAAGCTGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTATATTTTTGTAATATACGCTGAACAATTGTGT
TTTTTTTTATAAAAACCATTTTTTAC--AATTGTGGACAAGTTTTGAAATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACATAGAATGAAAATAAAAACGAAAAAACATAAAAGAAAGGG-AAAGAAAAAATAAAATAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAAGA-AAAAA-ACATGA-AATAAATCGGTCCAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCACGAAATGGGCCGACCCGTTTGCACTGCTCGCTCGT
GCGCTTCCGCGGAAGCGGAGCAGATGGACGCACGCGAGTGTCAAATAGGGTTCGCC------------------------
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------------------------------------------------
>chr3A_1
TGAACTACTAAGCATTTCTGGTTAGTTGATCGCGTAATTTTATTTAAACTCAATGCCGTGACAGATCCAGAAAAAATAAA
AAATAAATT-CAACCATTGAACATTTTTGTAAATATACAACGTTTAATTTTTAAATAGATAAAGAACATTTTTGGATACA
TGCTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATACATAAAATAT-TT
TTTATAAATATACACTGAACATTTTTTAACTACAAATTGAACACTTTTGTGATATAAGCTGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTT-ATAAAAACC-TTTTTTAC--TATTGTGGACAAGTTTTGAAATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACATAGAATGAAAATAAAAACGAAAAAACATAAAAGAAAAGG-AAAGAAAAAATAAAATAAATAGAAAACAAAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAAGA-AAAAA-ACATGA-AATAAATCGGTCCAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCAGGAAATGGGCCGGCCCGTTTGCACTGCCCGCTCGT
GCGCTTCAGCGGAAGCGGAGCAGATGGACGCACGCGAGCGTCAAATAGGGTTCGCC------------------------
--------------------------------------------------------------------------------
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------------------------------------------------
>chr6A_1
TGAACTACTAAGCATTTCTGGTTAGTTGATCGCGCAATTTTATTTAAACTCAATGCCGTGACATATCTAGAAAAAATACA
AAAAAAATT-CAACAATTGAACATTTTTGTAAATATACAATGTTCAATTTTTAAATAGATAAAGAATATTTTTGGATACA
TGCTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATACATAAAATAT-TT
TTTGTAAATATACACTGAACATTTTTTAACTACACATTGAACACTTTTGTGATATAAGCCGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATGTATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTTTATAAAAACC-TTTTTTAC--TATTGTGTACAAGTTTTGAAATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACATAGAATGAAAATAAAAACGAAAAAACATAAAAGAAAAGG-AAAGGAAAAATAAAATAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAAGA-AAAAA-ACATGA-AGTAAATCGGTCTAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTG-TTCAACGCACGAAATGGGCCGGCCCGTTTCCACTGCTCGCTCGT
GCGCTTCAGCGGAAGCGGAGCAGATGGACGCACGCGGGCGTCAAATAGGGTTCGCCG-----------------------
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------------------------------------------------
>chr6A_1
TGAGCTACTAAGTATTTTTGGTTAGTTGATCGCGCAATTTTATTTAAACTCAATGCCGTGACAGATCCAGAAAAAATACA
AAAAAAATT-CAACCATTGAACATTTTTGTAAATATACAACGTTCAATTTTTAAATAGATAAAGAACATTTTTGGATACA
CACTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATACATAAAATAT-TT
TTTGTAAATATACACTGAACATTTTTTAACTACACAATGAGCACTTTTGTGATATAAGCTGAACAATATTTAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATATGCTGAACAATTGTGA
TTTTTTT-ATAAAAACC-TTTTTTAC--TATTGTGGACAAGTTTTGAAATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACATAGAATGAAAATAAAAACGAAAAAACATAAAAGTAAAGG-AAAGAAAAAATAAAATAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAGGA-AAAAA-ACATGA-AAAAAATCGGTCCAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCACGAAATGGGCCGGCCCGTTTGCACTGCTCGCTGGT
GCGCTTCAGCGGAAGCGGAGCACATGGACGCACGCGAGCGTCAAATAGGGTTCGCC------------------------
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------------------------------------------------
>chr1A_1
TGAGCTACTAAGCATTTCTGGTTAGTTGATCGTGCAATTTTATTTAAACTCAATGCCGTGACAGGTCCAGAAAAAATACA
AAAAAAATT-CAACCATTGAACATTTTTGTAAATATACAACGTTCAATTTTTAAATAGACAAAGAACATTTTTGGATACA
CGCTGAACAATTTTGAAATGCACATTGAATATTTTTGTGATATACGCTGAATATTTTGTTAAATATGCATAAAATAT-TT
TTTGTAAATATACACTGAACATTTTTTAACTACACATTGAACACTTTTGTGATATAAGCTGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTT-ATAAAAACC-TTTTTTAC--TATTGTGGACAAGTTTTGAAATCATGAAAAAATTTTGGAATTTCAAACATTT
CTTAAAACATAGGATGAAAATAAAAACGAAAAAACATAAAAGAAAAGG-AAAGAAAAAATAAAATAAATAGAAAACAGAA
ACAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAAG--AAAAAAACATGA-AAAAAATCGGTCCAGGGAACCCT
CTAGAAGGTTCCCAAAACC-GTTTGCCTGGCCCTGCTTCAACGCACGAAATGGGCCAGCCCGTTTGCACTGCTCGCTCGT
GCGCTTCAGCGGAAGTGGAGCAGATGGACGCACGCGAGCGTCAAATAGGGTTCGCC------------------------
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------------------------------------------------
>chr7A_1
TGAGCTACTAAGCATTTCTAGTTAGTTGATCGCGCAATTTTATTTAAACTCAATGCCGTGACAGATCCAGAAAAAATT-A
AAAAAAAAT-CAACCATTGAACATTTTTGTAAATATACAATGTTCAATTTTTAAATAGACAAAGAACATTTTTGGATACA
TGCTGAACAATTTTGAAATACACATTGAATATTTTTGTGATATACGCGGAATATTTTGTTAAATATACATAAAATAT-TT
TTTGTAAATATACACTGAATATTTTTTAACTACGCATTGAACACTTTTGTGATATAAGCTGAACAATATTGAAATAGAAA
TTGAACATTTTTGTGATATATGTTGAACAATTTTTATATATACATTGTACATTTTTGTAATATACGCTGAACAATTGTGA
TTTTTTT-ATAAAAACC-TTTTTTAC--TATTGTGGACAAGTTTTGAAATCATGAACAAAAATTGGAATTTCGAACATTT
CTTAAAACATAGAATGAAAATAAAAACGAAAAAACATAAAAGAAAAGG-AAAGA-AAAATAAAATAAATAGAAAACAGAA
ATAGAAG-----AAAACAAGAAAAACAGAAAACCAGTAAAAG--AAAAA-ACATGA-AAAAAATCGGTCCAGGGAACCCT
CTAGAAGATTCCCAAAACC-GTTTGGCTGCCCCTGCTTCAATGCACGAAATGGGCCGGCCCGTTTGCACTGCTCGCTCGT
GCGCTTCAGCGGAAGCGGAGCAGATGGACGCACGCGACCGTCAAATAGGGTTCGCCGGTT--------------------
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------------------------------------------------
>chrUn_9
--------TAAGCGTTTGTGGTTGGTTGATCGCGCAAATTTCTTTGAACTCCATTCCATGACAGATCCAGAAAAAAAT-A
CAAAAAAATTCAACCATATAACATTTCTATAAATATATAACGTTCAATTTTTAAATAGACAAAGAACATTTTTGGATACA
TGCTGAACAATTTTGAAACACACATTGAATATTTTTGTGATATACGCTAGGTATTTACTTAAAAATATATTAAATAT-TT
TTTGTAAATATAAGATGAACATTTTTTAACTACACATTGAACATTTTTGTGATATAAGCTGAA-AATATTGAAACAGACA
TTGAACATTTTTTTGATATATGTTGAATTTTTTTTATAAATACATTGTACATGTTTGTAATATACGCTGAACAATTGTGA
AATTTTT-ATAATT----TTTTTTAAAAAATTGTGGACAAGTTTTGAGATCATGAACAAAATTTGGAATTTCGAACATTT
CTTAAAACAAAGAATGAAAATAAAAATGAAAAAAGATAAAAGAAAAAG-AAATA-GAAAACAGAAACCGAAGAAACAGAA
AAAAAAG-----ACAACAAGAAAAACCGAAAAC-AGTAAAAG--AAAAAAGCACAA-GAAAAACCGGTGGAGGGAACCCT
CTAGAAGGTTCCCA-AAATTGTTTGCCTGGCCCTGGTTCAACGCCCAAAATGGGCCGGCCTGTTCGCACTGCTTGCTCGT
GCGCTTCAGCGGAAGCGCAGCAGACGGACGCACGCGAGCGTCAAATAGGGTTCACCGGT---------------------
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------------------------------------------------
>chr2B_24
-----------------------AGTTGATTGCGCGAATTTCTTTGAACTACATGCCGAGACAGATCCAGAAAAAATA-A
CAAAAAAATTCAACCATTGAACATTTTTGTAAATATACGACGTTCAATTTTTGAATAGAAAAAGAACATTTTTGGATACA
TGCTGAATAATTCCGAAATACACATTGAATATTTTTGCGATATATGCTGAATAT-TTTTTAAACATATATTAAATAT-TT
TCTGTAAATATACGATGAACATTTTTTAATTACACATTGAACATTTT-GTGATATAATCTAAACAATATTGAAATAGACA
TTGAACATTTTTGTGATATATGCTGAACAATTTTTATATAGACATTGTTTATTTTTGTAAAATATGCTGAACAATTGTGA
ATTTTTATAAAAAAACA-TTTTTAG--AAATTGTGGACAAGTTTTGAAATCATGAACAAAATTTAGAATTTCGAACATTT
CTTAAAACAAAGAATCATAATAAGAACGAAAAATGATAAAAGAAAAATAAATGAAAAAATATAAGAAATAGAAAAGAGAA
ACAGAGAAAAATAAAACAAGAAAAACGTAAAACCAGTAAAAGA-GAAAA-AAACATGAAAAAGCAGGTCGAGGGAACCCT
CTAGAAGATTCCCA-AACC-GTTTGCCTGGCCTTGCTTCAACGCCCGAAATGGGCCGGGGCATTCACACTGCTCGCTCGT
GCCC-TCAGCGGAAGCGCAGCAGACGGACGCACGCGAGCGTCAGATAG-GTTCGCCG-----------------------
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>chr2B_859
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--------------------------------------------------------------------------ACCGTC
ACGTACGTAA-CTTGGTTACGGGTATATAGGAACTCGCTCAACGACTTTCCTCAATCGCCGCCCCCTCCCGAATCCTACT
TCCGATCGCCGTCGACAGCCTACCTTACGCCGTCTTCTCCCGATCTCGACGTGGTCATGGTTATTTCCCACTCCCACTCT
CAGCCTCTACTAGACCACCGAACCGAGGAGCACAATCACGGCGATCACCTCTCGGGACCGCAGGGTAGCAGTAGTGATGG
CTCCTCGAGCCTGCCCAGGGGCGGCAAGCTGCGGACAAAATCCTGCGAAGACATGCTCGGCCGTATACGACGAGGTGGCA
TCGACGAAACCAAGGACTACTTCAAGCGCCGTGAGATGGATCCAGCCTACGTGAGCTTTGAGGACATGTTGGCCTCCAAG
GAGTTCCGGGAGGGCAACAGCCGTCCGGCGCCGGAGGCTGGGATCAGGCACCCGCTCGTGAGGACGGCGTCGCGGCTGTA
CACCTCTACGGCCCACCCAAGTCAGCGTCGCCGATCTCCGGGTCCGCTAGGGACACGCCGTGGCGGCACCATGCATCGTT
TTGTGAAGAAGTACGTCTGTCCTTGTTTGGACTTGGTCGCCAGAGCTTTCGGTTGCATGCCAGGCGTGGCGGCTCACTGA
TTGGTTCAATGGATTATCATTCGTTTTATGCTCTGTG-AGTAAGGGCAATGT-TGCTTTAACCATGCTCTTAATAGTTTG
TTCTTAGATCGATAGTCATGTGAAGCTGACGTATAGTTAGCGTAGTTTGTTGCCTGGACACATATATTGTTGATTCTCTT
GGAATCGTTTAGATTTATAATCGTTTCTTTCTAAAGATTCTCGCCGGCTTGTTAGAGGGTTCGTTTGAAAAGCGTTTGTG
TTCTTGTAAAACGGGCACGACCGTCGCTCCCTGTGATGGTACCATGGTTCATCCACCCTCGC------------------
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------------------------------------------------
>chr2D_859
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--------------------------------------------------------------------------ACCGTC
TCGTACGTAA-CTTGGTTACGGGTATATAGGAACTCGCTCAACGACTTTCCTCAATCGCCCCCCCTTCACGAATCCTACT
TCCGATCGCCGTCGAGAGCCTACCTTACGCCGTCTACTCCCGATCTCGACGTGGTCATGGTTATTTCCCACTCCCACTCT
CAGCCTCTACTAGACCACCGAACCGAGGAGCACAATCACGGCGATCACCTCTCGGGACCGCAGGGTAGCAGTAGTGATGG
CTCCTCGAGCCTGCCCAGGGGCGGCAAGCTGCGGACAAAATCCTGCGAAGACATGCTCGGCCGTATACGACGAGGTGGCA
TCGACGAAACCAAGGACTACTTCAAGCGCCGTGAGACGGATCCAGCCTACGTGAGCTTTGAGGACATGTTGGCCTCCAAG
GAGTTCCGGGAGGGCAACAGCCGTCCGGCGCCGGAGGCTGGGATCAGGCACCCGCTCGTGAGGACGGCGTCGCGGCTGTA
CACATCTACGGCCCACCCGCGGCAGCGTCGCCGATCTCCGGGTCCGCTAGGGACACGCCGTGGCGGCACCATGCATCGTT
TTGTGAAGAAGTACGTCTGCCCTTGTTTGGACTTGGTCGCCAGAGCTTTCGGTTGCATGCCAGGCGTGGCGGCTCACTGA
TTGGTTCAATGGATCATCATTCGTTTTATGCTCTGTG-AATAAGAGCAATGT-TGCTTTAACCATGCGCTTAATAGTTTG
TTCTTAGATCGATAGTCATGTGAAGCTGACGCTTTGTTAGCGTAGTTAGTTGCCTGGACACATACGTTGTAGATTCTCTT
GGAACCGTTTAGATTCT------TTTCTTTCTGAAGATCCTGGCCGGCTTGTTAAAGGGTTCGTTTGAAAAGCGTTTGTG
TTCTTGTAAAACGGGCACGACCGTCGCT----------------------------------------------------
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>chr4D_1891
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-------TTAAACCGCCCCCACAGCCATCCGATTCGGATGCTTCTAGCCGCAGGATCAAGCGACACTACGCAACTCCCGT
GTCAGCACCACGCAGCAGCTCCCATGGCCGCACCCATGGCTTCAGGTGACGCTGCATTCCAACCTCGCCGGAGCTTTCAA
CGACGGCCGCGACGCTTCACTGCTACTTCAACGGCGCTTCATTGCATCCTCACCGGAGCTCCGACGACCGCCGCA-----
-----------------GCGCTTCATTGTAACCTCGCCGGAGCTCCGACGACCGCCGCGACGC-TTCACTGCAGCTTCCA
CGGTGCTTCATTGCAACCTCGCCGGAGCTCCGACGACT------------------------------------------
----------------------GCTGCAGCGCTTCACTACAGCTTCCACGACGCTTCATTGAAACCTCGTCGGAGCTCCG
ACGACAGGCGCGGCACTTCACTGAAGCTCCGCTGGCGCTTCATTGCAGCCCCGCCGCACCCGATGGGAGCCGGCGACGCT
TCACTGCAGCACAACGTGACGGCGGCGAGGTGCTGCGACGAATCACGCGGTAGCGACGAAGATGTTGCGATGCAACACGC
GGTGGCGACGGAGATGTTGCGACGCAGCACGCGGTGGCGAC--------------------------------GGAGCTC
TGGCAGCCTGATGTTGCGCCGCTCCTCTC--CAGCT--TCCCGATTGCAGCATGTGCGACGAGTGGCGACCCGTCTCCGA
CACCGTCGTCGTCTGCAGCTCCGGTGGCCACTACCACGCAGCCCCGCG
>chr1D_1893
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---------AAGCCGCCCCCACAGCCATCCGATTCAGATGCTTCTAACTGCAGGATCAGTCGACAGCATGCAGCTCCCGT
GTCAGCACCACACAACAGCTCCCATCGCCGCACCCATGGCTTCAGGTGACGCTGCATTCCAACCTCGCCGGAGCTTCCAA
CGACGGCCGCGGCGCTTCACTGCTACTTCAACGGCGCTTCATTGCAACCTCACCGGAGCTCTGACGACCGCCGCGACGCT
TCACTACCGCTTTGACGGCGCTTCATTGCAACCTCGCCGGAGCTCCGACGACCGCCGCAACGC-TTCACTACAGCTTCCA
CGGTGCTTCATTGCAACCTCGCCGGAGCTCCGACGACCGCCGCGGCGCTTCACTGCCGCTTCGACGGCGCTTCATTGCAA
CCTCGCCGGAGCTCCGACGACCGCTGCAGCGCTTCACTGCAGCTTCCACGACGCTTCATTGCAACCTCGCCGGAGCTCCG
ACGACTGCCGCGGCACTTCACTGAAGCTCCGCTGGCGCTTCATTGCAGCCCCGCCGCACCCAATGGGAGCCGGCGACGCT
TCACTGCAGCACAACGTGACGACGGCGAGGTGCTGCGACGAATCACGCGGT-----------------------------
-----------------------------------GGCGAC--------------------------------GGAGCTA
TGGCAGCCCGATGTTGCGATGCTCCTCTCCTCAGCT--TCCCGATTGCAGCATGTGCGATGAGTGGCGACCCGTCCCCGA
TGCCGTCGTCGTCTGCAGCTCCGGCGGCCACTACCATGCAGCCCCGCG
>chr7A_2013
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-------------------------------------------------CGCTTCATTACAACCACGCTGGAGCT-CCAA
CGACCGCCCCGGCACTTCACTGCAGCTTCGACG-----------------------------------------------
------------------CGCTTCATTGCAACCTCGCCGGAGCCCCGACAACCGCCGCGGTGCTTTCACTGCAGCTTCGA
CGGCGCTTCATTGCAACCTCGCCGGAGCTCTGAGGACCGCTGTGACGCTTCACTGCGGCTTCGACGGCGCTTCATTGCAA
CCTCGCCGGAGCTCTGAGGACCGCTGTGACGCTTCACTGCGGCTTCGACGGCGCTTCATTGCAACCTCGCCGGAGCTCCA
ACGACCACC----------------------GTGGCACTTCATTGCAGCCCGGCCGCACCCGATGGGAGCCGGCGAAGCT
TCACTGCAGCACAACGTGACGGCGGGGAGGTGCTCCGACGAATCGCGCGGT-----------------------------
-----------------------------------GGCGACGAAGTTGTTGCGATGCAGCACGCGGTGGCGACGGAGCTC
TGGCTGCCCGATGTTGCGCTGCTCCTCTCCTCAGCT--TCCCGGTTGTAGCATGTGCGACGAGTGGCGACCCGTCTTCGA
TGCTGTCGTCGTCTGCAGCTCCGGTGGCCACTGCCACACAGCC-----
>chr5D_2014
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--------------------------------------------------GCTTCATTGCAACCTCACCGGAGCT-CCCA
CAACCGCCGCAGCGCTTCACTGCAGCTTCCACGT----------------------------------------------
--------------------CTTCATTGCAACCTCGCCGGAGCTCCGACGACCGCCGCAGCGC-TTCACTGCAGCTTCCA
CGT--CTTCATTGCAACCTCGCCGGAGCTCCGACGACCGCCGCGGCGCTTCACTGCAGCTTCGACGGCGCTTCATTGCAA
CCTCGCCGGAGCTCCGACGACCGCCGCGGCGCTTCACTGCAGCTTCGACGACGCTTCATTACAACCTCGCCG--------
--------------------------------------------------------CACCCGACGGGAGCCGGCGAAGCT
TCACTGCAGCACAACGCGACGGCGGCGAGGTGCTGCGACGAATAAGGCGGT-----------------------------
-----------------------------------GGCGACGAAGATGTTGCGACGCAGCACGCGGTGCCGCTGGAGCTC
TGGCAGCCCGATGTTGCCCTGCTCCTCTCCTCAGCT--TCCCGATTGTAGGATGTGCGACGAGTGGCAACCCATCTCCAA
CACCGTCGTCATCTGCAGCTCCGGTGGCCACTACCACGCAGCCCCGCG
>SNPs
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------------------------------------------------S---------
-------------------S------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
-----S----S--------------------SS-----S------------S-----------S----------------
--------------------------------------------------------------------------------
------------S-------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------------------------------------------S------
----------------SS----------------------------S---S-----S-----------------------
------------------------------------------S-----------S------------------S-S----
--------------S----------S-------------S---------S------------S--S--S-------S---
-----------------S------------S---S-SS--------------S-------SS------SSS----S----
-----------S--------------------------------------------S---------------------S-
---S-S-S---------------------------------S---------------------S----------------
--------------S---------------------------S-------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----------S-----------S---------------------------S--------------S-------
----------------------------S-----S--------S-S----------------------------------
----------------------------------S---------------------------S----SS-----------
------------------------------------------------------------------------------S-
-----------------------------S-----S--S------S----------------------------------
------------------------------------------S------S------------------------------
--S------S-------------S------------------------------------S--------S----------
-----------------------SS--S----------S-----------------------------------------
--------------------------------------------------------------------------------
-S------------------------------SSSSSS----------------------------S-------------
-S-----------------------------------------S----
>forward_832
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AGGAGCTTTCTTCACAGGCC------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>reverse_1831
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATCCACCCTC
GCTAGTTCCT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
