>input_sequence_78058
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--------------------------------------------------------------ATGACGCGCACCAGAGAC
AACACTGCAGTTCTGTGCTTGATGGCTCTCCTGGCCATGTCTACCACCATCATTTCCTGCCATGCAGAAGGTACGTACTC
CCTATTTTCACAAATGTAAC--ATGCCTTATACATATTCTTATAT------AGACTACATACAAACCGAAATGAGTGAAC
AAACACAGTAAAATACATTCATATACATTTAAATCAGAAAAAAAAGTCACTAGAACATCCTATAATAGTGAAGGGGGTGA
CTAATTGTTTATTCAGGCAAAGTCCCCAGTTGATTTATTTTGCGTTATATATCGAGTATTATGTGCTGACTGGGTCG---
-TGCATGCGTATAAATAGGTACCACCAAGATGTGTGTACGGGCGAAAACCTGCGCGCCCACGCCGCCACCAAACTACGAC
GGAGTGTGCAAGCTTTACTGCAGAACTCAGGGTTACGACATGGATGCAAGCTATTGCACGGCAGAGCATGGTGGCACGTG
CTGCTGCGTGAGGAAATAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6D_1_TraesCS6D01G097800
TGAACTGTCCTGGTAGTCCGCACCCGTGGTGTGATCCTCTTGTAAAGGCGTGGGGCGAATTCCTGGGTCTGAAATCCGTG
CAACCACGTGTCTTCCCGAAAGAACGA-GGATCTACCATCCCCCACATCCACGAAAACTACTGCGAGATACTCCCCCAAG
GTCGAACACTGTCAGTTCCCCGAAGCCATAGCTAACACACACCAAAAGCCATGTTCAACCATCTGAAATTAGGGTGTCCA
AGCCCGCCATGTCCATTTGGGCAATTTTTCAACCATCTACGAAACATGTGCATCTACGAAATCTTCATGATTCTAAACAA
GCCTATAATGGACAAAATTTCTGTCCCTTACCACAATTAACTTACTATATTTGATAATCT--------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TACATGGGTG
TTCACTCAACTTGGGCGAAAAAATCAATTTGATCGATCATCGGACTTAGAGATA---CATTGTTGACGGTCACTACTCAC
TAAGGTGGTTTTATTGAACAGAACTTGGTATTTTTGTTTGAAGATGAACTCCACCAACA-A--CTATTATATGGTAGACA
CGACTCGCGTTGAACTACTAAAATAAGTACGTCATTTGGTGCAACACACGAGCAATTAATT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TACACT-AATAAAGGCAAGACATAATCCAGGAGGCTATCTCATCTGCCCGCGTGTTAATAAGGAACTGATTAATACATGA
AGATATAATAGGGAAAAATT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------AATTCTAAAACATTTACCAGCG
CATCGATAAGGAAAGGATAAATACGTGAAGATATAATGGGCAAAAATTGATTCTAAAGTATTTGCCAGCGCGTTGATAAG
GAAAGGATAAGTACATGAAGATATAATGGGCGAAAATTGATT----TAAAGTATTTGCCAGCACGTTAATAC--------
----------------AGGAAATAATAAAATGACATT-AATCCATTCTCCTATCTCTATCTATATAAACACTAGCACGCC
CTGTTCCGGTGACATCGTCGCTACAGAAGGACACCAACGGTACAAAGAAAAGGATCACCAACATGACGCGCACCAGAGAC
AACACTGCAGTTCTGTGCTTGATGGCTCTCCTGGCCATGTCTACCACCATCATTTCCTGCCATGCAGAAGGTACGTACTC
CCTATTTTCACAAATGTAAC--ATGCCTTATACATATTCTTATAT------AGACTACATACAAACCGAAATGAGTGAAC
AAACACAGTAAAATACATTCATATACATTTAAATCAGAAAAAAAAGTCACTAGAACATCCTATAATAGTGAAGGGGGTGA
CTAATTGTTTATTCAGGCAAAGTCCCCAGTTGATTTATTTTGCGTTATATATCGAGTATTATGTGCTGACTGGGTCG---
-TGCATGCGTATAAATAGGTACCACCAAGATGTGTGTACGGGCGAAAACCTGCGCGCCCACGCCGCCACCAAACTACGAC
GGAGTGTGCAAGCTTTACTGCAGAACTCAGGGTTACGACATGGATGCAAGCTATTGCACGGCAGAGCATGGTGGCACGTG
CTGCTGCGTGAGGAAATAACTTGTTGAGAATTGAGATGAGGTTGGGATGCATCACACTTGTATTCATCCACAAAGGGTAA
TAATATATAGAGTACATCATTTTTTTA--AACGAAGACGCTAGGGGCGTCCGGCTTTAAATTAATAAAGCTCTCAACGTA
GACAGCGTACCAACCTTGTCA-TCTTAC---AAGACCACGG-AAGCTCAGGCCAAACTGACACGGAAAGTTTAGGGTTTT
AGTGGCCAAAAGA-GTGCGAGT-GAAGAAT-TACATGGCTC-G-AGGCCAGATCATTGAGCACGTAGGCTCGCACACA-A
ACCAAAAGGGCCACTTCAAGACGGGGAAGTGGCGGCTGGCTCCCTAGCCAAAACATACACCTGGCGCAGATGGTCTTGAG
CTTGCTTCATCTTCTCAGCATCCCTGCGC--CTCGCCAACGGACTCCACTGCTGCAGGAATAAGTTGCATTTGTAGATTA
TGTTCGCCGGATGAGTCGGGAAGATCCCCTCAATC-CTAGTTTGTTCGTAGTAAGCCATAATGCCCAGAACAGTGCCCCA
ACACAACTCCACAGCACGCG-TTTGTTGCTCCCTTGGGAGGAGTCGAGGATGGACGTAAGATCATTGGAAGACCGCGGAT
CCCAAGAAACGGCAGCCGCGGTCCGGACCGCGCTCCAGGCAAAAAGGGCCATCGGGCACCGAAAGAAAACGTGGTTCGCG
TCCTCGGCAATGTTACAAATCGCACACGTGCCGGTTGCCGGACCTTGCCATTTGGCCACATTTTCAGAGGTGGGTAGTCT
GTTCCTGAACAGCTGCGAGAAAAACACCTTGATTTTCAGCGGGAGGCGCGCGTTCCACAGCCCCTTAGGCATCGGAAGGG
ACGGACCGAGAACTTGCCGGACGTGGTGACAGCCCAAGTCACCGAGTCCGCGGACGTGGACAGCTCCACCGGGCTGATAA
GCACGAGCAGCGTTGCTAGGTTCGCTTGTTCTTGCCCATTGAGGTCCCGACGAAAGTGGATCGTTGGGGGGGGGGG
>chr6B_1
TGAACTGTCCTGGTAGCCCGCACCCGAGGTCTGATTCACTTGTGGTGTG--GGAGCAAATTCCTGGATCCGAAATCCATG
CAACCACGTGTCTTCCCAACAGAACGA-GGATTTACCATCCCCCACATCCACAAAAACTACTGCAAGATAGTCCCCCAAG
GTCTAACACTGTCAGTTCCCCGCAGCCATAGCTAACACACACCAAAAGCAATGTTCAACCATCTGAAATTAGGGAGTCCA
AGCCCGCTA-GTCCATTTGGGCAATTCTTCAACCATCTACGAAACTTGTGCATCTACGAAATCTTCATGATTCTAAAC--
GCCTCTAATTGGGAAAAGTTCTGACCCTTACCACAATTAACATACAATATTACCAAAAAAGGCTTTCGGTCTGCTTTATA
AATAAAGCAACCACCAAGCACAAAGTATCAAGGTAACAACAAAACATACCACACACCAACACCACGCCACCGCAGGTCAG
GTCCAACACTCACACACAAAGACACAAACAGCCCCAAGTTCCGTTGTGGGCACAGCACAACAAGCTCAACACAGACGCAC
GATGAAACATCCCAAGACGGCGGTGACGGAGGCATGGACACGACGATCTAATCTGGCTCCGGTGGTGGTGGGGGAGGCGG
TGGCGCCAACCGGAGAGCCATCGCGCGAAGCTGGGTGATGATGGAGGTGATGGTGTCTCTCTCCCTGGGACGGCTAAGCG
GCCGCCAAAGCTGCAAGTAACTAGACCATTTGAACAAAGCGTTAGTAGCACGACAAAGAGGAATACGTTGAATCACAAAT
TTATTCCTAACAGTCCACAACGTCCAGGCAAGGACCCCAATGGTCAGCCACCTAATGTGGCGCAACGCGGGTGGGATCGC
CTGGAGTTCGGCAAAGAGAGCGGGGAAGTTGTTATGGTCCCAGCTTCCACCCACAATCTCGCGGAAACAGCTCCAAAGGA
ACTGCGCAGACACGTAGGTGAAGAAGATATGGTTCGAATCTTCTTCAGGCCTGCAAAGCGGGCAACACCCATCCCCAGGG
CCATTTTGCTTCAGAACCTCTATGCCTGATGGGAGGCGGCCGCGAATCATTGCCACAAGAAGATCCTAATTTTCAGGGGG
AGGCGAATCTCCCAAATGGAGGAGAGCGCCTCATGGCCAAGCGAGGGGACGATGGACAGGTAGAGAGATTTGGTGGAGAA
TTGTCCAGAAGGCTATAGCCGCCATCTGGTGCGGTCATCGTCCGCTAAGAGATCAGGCTCGTGGAGAGCAATACAGTTGA
GCAGCTCTTGCCAGTCCGCGTTCTCAGCCGGGCCAAAAGGTCTCCGGAACACGAGTTACCCTAAGTCAATAAGGGCGGTC
GCCATGGAGATCTACGGAGCAACCGAGATGGAGAACAGGTCCGGAAAGCGAGCCGCAAGGGGCGTGTCACCAGTCCATCT
ATCGAACCAGAACAGTGTGGCGGTGCCGGAACCAATCTCGATCGAGGTCCCGATCCGGAGGACAGGAAGGAGCTGAATGA
TGGGCTGCCAGAACTGGGAGCCCCCAGACCGCTGGCAGAAGGCAAGAGGCTGGCCACGGAGGTATTTCTGCTGAATGATG
CGAAGCCACAGGCCACCATCTCCGTTGGCGATCCGCCAGAGCCACCGAGTCAGAAGAGCCAATGTTCATGCGTTTGGAGG
ACATGACCCCGAGTCCGCCCTAGTCGCGAGGTTTGCAGATCTCACACCACCTGACCATGTGGTACTTCTGCTTATCACCC
TCGCCTGCCCAGAAGAAACGCCCCTGAACGGTGGCAATCTCGTGATGTAGAGTCTCGGGAAGGCTGTAGAAGCTCATGAT
GAATAATAGTAGGATGGAGAGGGACGAGTTAATGAGCACCGTACGGCCGCTTTCTAGAGCCACCTACCCTGCCAGGGCTC
GATACGGTGCTGAAGCTTTCCCACTGAGGGGCGCAACTCGGCCACCGTGAGCCTGGAGTCGCTAATGGGTATCTCCAGAT
ATGTCGTGGGGAAGCACCCGAGCTTGGCAGTTAAGCCAGATATGTCACTTACAATATTTGATTACCTTAGTACATGGGTG
TTCACTCAACTTGGGTGAAAAAATCACTTT----GATCACCGGACTTAGAGATA---CATTGTTTACGGTCAG-------
TAAAGTGGTTTTATTGAACAGAACTTGGTATCTTTGTTCAAAGATGAACTCCACCAATGATTGCTATTATATGGTAGACG
CGACCGGTGTTGAACTACTAAATTAAATACGTCCTTCGTTGCAACACGCGAGCAATTAACTAGTACTCCCTCCGTTTTTA
TTTAGTTCGCGTATTAGCTTTGGTCAAAGTCAAGCTTTACAAACTTTGACCAAGTTTAAAAACAAAAATATTAAAATATG
CAATAACAAATCAACAACATTAGATTTATTATTGAATGTATTTTCACATCGTATAGATTTATTATGATAAATGTCTATAT
TGTTTTTTATAAACTTTCAAACTTTACGAAGTTTGACTTCAGTCAACTCTAATATGTAGAGTAAATAAAAACGGAAGGAG
TACACT-AACAAAGGCAAGACATAAACCAAGAGTCTATCTCATCTGCCCGCGTGTTAATAAGGAACTGATTAATACGCGG
GCAATTAACTTTGGAGGGTGCTTGGATACGTTTTAGTCTCATGACTAAAAGTAGTGGGACTAAAATTTGCTAGCCTCACC
CATACTTGGTGCCCCTGACTAAAAAAATTTAGTCTCAAGACTAGTTTTAGCCCCTCTTTAATTAGGGGTGCTTGGGACTT
TAGCCTCTTAAAGAGACTATTTTTAGTCAAATTAAAATAAGTCCTTTGGATCCAAGCAACCTCTAAAACACGT-------
-------------------------------------------------------------------------TGTTAAG
GAAAGGATAAATACATGAAGATATAATGGGCGAAAATTAATTCTCCTAAAGTATTTGCCAGCACATTAATAT--------
----------------AGGAAATAATAAAATGGCATTAAATCCATTCTCCTATCTCTAT-TATATAAACACTGGCACGCC
CAATTCCGGTGACATCGTCGCTACAGAAGGACACCAACGGTACAAAGAAAAGGATCACCAACATGACGCGCACCAGAGAC
AACACTGCAGTTCTGTGCTTGATGGCTCTCCTGGCCATGTCTACCACCATCATTTCCTGTCATGCAGCAGGTACGTACTC
CCTATTTTCACAAATGTAATATATT--TTGTATATATTCTTATAT------AGACTACATAT-AACCGAAATAAGTGAAT
AAACACAGTAAAATACGTCCATATACATTTAAATCAGAAAAAA--GTCACTAGAACATCCTATAATAGTGAAGGGGGTGA
CTAATTGTTTATTCAGGCAAAGTCTCCAGGTGATTTATTTTGCGCTATATATCAAATATTATGTGCTGACTGGGTCG---
-TGCATGCGTATAAATAGGTACCACCAAGATGTGTGTACGGGCGAAAACCTGCGCGCCCACGCCGCCACCAAACTACGAC
GGTGTGTGCAAGCTTTACTGCAGAACTCAGGGTTACGACATAGATGCAAGCTATTGCACGGCAGAGCATGGTGGCACGTG
CTGCTGCGTGAGGAAATAATTG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6A_1
TGAACTGTCCTGGCTGCCCGCACCCGAGGTCTGGTCCTCTTGCAAAGGCGCGGGGCAAATTCCTAGATCCGAAATCCATG
CAACCATGTGTCTTCCCAACAAAACGAAGGATTTACCATCCCCCACATCCACAAAAAGTACTGCGAGATACTCCCCCAAG
GTCTAACATTCTCAGTTCCCCGCAGCCATAGC--ACGCACACCAAAAGCAATGTTCAACCATCTGAAATTAGGGAGCCCA
AGCTCGCCA-GTCCATTTGGGAAAATTTTCAACCATCTAT-----------------GAAATCTTCATGATTCTAAACAT
GCCTCTAATAGACAAAATTTTTGACCCTTACAACAATTAACTTACT----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------TATTTGATTACCTTAGTACATGGGTG
TTCACTCAACTTGGACGAAAAATTCACTTT----GATCACTGGACTTAGAGATAGTACATTGTTTACGGTCAC-------
CAAGGTGGTTTTATTGAACAGAACTTGATATTTTTGTTCAAAGATGAACTCCACCAACTGA--CTATTATATGGTAGACA
CGACCGGTGTTGAACTACTAAGGTAAGTACGTCCTTCGTTGCAACGCGCGATCAATTAACT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TACACT-GATAAAGGCAAGACATAATCGAGGAGGCTATCTCATCTGCCCCCGTGTTAATAAGGAACTGATTAATACATGA
AGATAAAAATGGGCAAAATT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GATTCTA---------------
----------------------------------------------------CTAAAGTATTTGCCAGCACGCTGATAAG
GAAAGGGTAAATACATGAAGATATAATGGGCCAAAATTAATTCT---AAACTATTTGCCAGCACGTTAATACAGGAAATA
CTACCTCGCAAAAAAAAGGAAATACTAAAATGACATTAAATCCATTCTCCTATCTCTATCTATATAAACACTAGCACGCC
CTATTCCGGTGACATCGTCGCTAGGGAAGGACACCGACGGTACAAAGAAAAGGATCGCCAACATGACGCGCACCAGAGAC
AACACCGCAGTTCTGTGCTTGATGGCTCTCCTGGCCATGTCTACCACCATCATTTCCTGCCATGCAGCAGGTACGTACTC
CCTATTTTCACAAATTTGAACTAAAACTACGACGAGTAATTTAGAATGGAGAGAGTACATACAAACA-AAATGAATGAAC
AAACACAGTAAAATACGTCCATATACATTTAAATAAGAAAAAA--GTCACTAGAACGTCCTATAATAGTGAAGGGGGTGA
CTAATTGTTTATTCAGGCAAAGTCCCCAGGTGATTTATTTTGCACTATATATTGAGTATTATGTGCTGACTGGGTTATGC
ATGCATTCGTATAAATAGGTACCACCAAGATGTGTGTACAGGCGAAAACCTGCGCGCCCACGCCGCCACCAAACTACGAC
GGAGTGTGCAAGCTTTACTGCAGAACTCAGGGTTACGACATGGATGCAAGCTATTGCACGGCAGAGCATGGTGGCACGTG
CTGCTGCGTGAGGAAATAATTG----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6A_596
CAATTT--------------------------------------------------------------------------
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---------------------------------------------------------AACC-------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AG
TAACTA-AAAAAATGCAAGACATAATCCAGGAGGCTATCTCATTTGCCCGCGCGTTAACAAGGAACTGATTAATACATGA
AGATGTAATAGGTAAAAAAT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ACTTCTAGAACATTT-------
-------------------------------------------------------------------------TGATAAG
GAAAGAATAAATACATGAAGATATGATAGGCAAAAATTGATTA---TAAAGTATTTGCCAAAACATTAATAT--------
----------------AGGAAATAATAAAATGTCATTAAATCCATTCTCCGATC----TCTATATAAAGACTAGCACGCC
CTATTCCGGTGACAGCGTCGCTACAGAAGGACAACAACGCTACAAAGAGAAGGATCCCCAACATGACGAGCACCAGAGAC
AACACTCGCGTTTTGTGCTTGATGGCTCTCGTGGCCATGTCTACCACCATCATTTCCTGCCATGCAGCAGGTACCTACTC
CCTTCATTCACAAATGTAAC--ATA--TTATATATATTTTTATGC------ATACTACATATAGACTGAAATAAGTGAGC
AAACATACTAAAATGCACCCATATACATTTAAATCAAAAAAAA--GTCA-------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------TCATAGAA--------------------
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----------------------------------------------------------------------------
>chr6A_596
CAATTT--------------------------------------------------------------------------
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---------------------------------------------------------AACC-------------------
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------------------------------------------------------------------------------AG
TAACTAAAAAAAATGCAAGACATAATCCAGGAGGCTATCTCATTTGCCCGCGCGTTAACAAGGAACTGATTAATACATGA
AGATGTAATAGGTAAAAATT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ACTTCTAGAACATTT-------
-------------------------------------------------------------------------TGATAAG
GAAAGAATAAATGCATGAAGATATGATAGGCAAAAATTGATTA---TAAAGTATTTGCCAAAACATTAATAT--------
----------------AGGAAATAATAAAATGTCATTAAATCCATTCTCCGATC----TCTATATAAAGACTAGCACACC
CTATTCCGGTGACAGTGTCGCTACAGAAGGACAACAACGCTACAAAGAGAAGGATCCCCAACATGACGAGCACCAGAGAC
AACACTCGCGTTTTGTGCTTGATGGCTCTCGTGGCCATGTCTACCACCATCATTTCCTGCCATGCAGCAGGTACCTACTC
CCTTCATTCACAAATGTAAC--ATA--TTATATATATTTTTATGC------ATACTACATACAGACTGAAATAAGTGAGC
AAACATACTAAAATGCACCCATATACATTTAAATCAAAAAAA--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6A_596
CAATTT--------------------------------------------------------------------------
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---------------------------------------------------------AACC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TAACTA-AAAAAATGCAAGACATAATCCAGGAGGCTATCTCATTTGCCCACGCGTTAACAAGTAACTGATTAATACATGA
AGATATAATAGGTAAAAATT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ACTTCTAGAACATTT-------
-------------------------------------------------------------------------TGATAAG
GAAAGAATAAATACATGAAGATACAATAGGCAAAAAATGATTA---TAAAGTATTGGCCAAAACATTAATAT--------
----------------AGGAAATAATAAAATGTCATTAAATCCATTCTCCGATC----TCTATATAAAGACTAGCACGCC
CTATTCCGGTGACAGCGTTACTACAGAAGGACAACAACGCTACGAAGAGAAGTATCCC-AACATGACGAGCACGAGAGAC
AACACTCGCGTTCTGTGCTTGATGGCTCTCGTGGCCATGTCTACCACCATCATTTCCTG-CATGCAGCAGGTACCTACTC
CCTTCATTCACAAATGTAAC--ATA--TTATATATATTTTTATGC------ATACTACATACAGACTGAAATAAGTGAGC
AAACATATTAAAATGCACCCATATATATTTAAATCAGAAAAA--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr6A_599
--------------------------------------------------------------------------------
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-------------------------------------------------------TTAACC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TAACTA-AAAAAATGCAAGACATAATCCAGGAGGCTATCTCATTTGCCCGCGCGTTAACAAGGAACTGATTAATACATGA
AGATATAATAGGTAAAAATT------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ACTTCTAGAACATTT-------
-------------------------------------------------------------------------TGATAAG
GAAAGAATAAATACATGAAGATATAATAGGCAAAAATTGATTA---TAAAGTATTTGCCAAAACATTAATAT--------
----------------AGGAAATAATAAAATGATATTAAATCCATTCTCCGATC----TCTATATAAAGACTAGCACGCC
CTATTCCGGTGACAGCGTCGCTACAGAAGGACAACAACGCTACGAAGAGAAGGATCCCCAACATGACGAGCACCAGAGAC
AACACTCGCATTCTGTGCTTGATGGCTCTTGTCGCCATGTCTACCACCATCATTTCCTGCCATGCAGCAGGTACCTACTC
CCTTCATTCACAAATGTAAC--ATA--TTATATATATATTTATGC------ATACTACATACAGACTGAAATAAGTGAGC
AAACATACTAAAATGCATCCATATACATTTAAATCAGAAAAA--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr2A_1563
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GTAA
TAATATTGAGCCATCTTT-----TTTTAGAACGAAGACGTTAGGGGCGTCCGGCTTTAAATTAATAAAGCTCATAACATA
GGCAGCGTACCAACCAAATCA-ACTTAC---ACGAGCACGG-AAGCTCAGGCCATACTGTCACGGAGAGTTTAAGGTTT-
AGCGGCCAAAGGA-TCGCGATC-GGAGAAAATACATGGCAT-G-AGGCCAAATCATGGAGCACGCAGGCTCACGCACA-C
ACCAAAAGGACCACTTCAGGATGAGGAAGTGGCGGCTGGCTCCCTAGCCAATACATAGACCTGGCGCAGACGGTCTTGAG
CTTGCTTCATCTTCTCAGTATCCTTACAC--CTCGCCAACGGACTCCACTGCTACAGGAAGAGGTTGCATTTGTAGATTA
TGTTAGCCGGATGAGTCGGGAAGATCCCCTCAATCGCTAATTTGTTCCTAGTAAGTCATAAATCCTAGAACAGTGCCCCA
GCACAGCTCCAGAACACGCG-CTTGTTACTCCCCTGGACGGAGTCGGGGATGGATGTAAGATCATTTGCCGATCGAGGGT
CCCAGGAAACGTCAGTCGCAGTCCGGACCGCGCTCCAAGCAAAACAGGCCAACGGGCACTGAAAGAAAACATGGTTCGCG
TCCTCTGCAACGTTACAGATCGCACATGTGCCGGTTGCCAGGCCTTGTCGTTTGGCCACATTTTTAGAGGTGGGTAGTCT
GTTCCTAAACAGCTGCTTGAAGAACACCTTGATCTTGAGCGGAAGGCGTGCATTCCACAACCCTTTTGGCACCTGAAGGG
ACGGCCC-------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr6D_1586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------TTTTTTTAAGAACGAAGACGCTAGAAGCGTCCGGCTTTAAATTAATAAAACCCACAACATA
GGCAACGTACCAACCAAGTCA-CCTTAC---ATGACACCGAAATGCTTAAGCCAAACAGACGCGGAAAGTTTACGGTTT-
AGCGGCCAAAAGA-GTGCGAGC-CGAGAGT-TACATGGCGC-GTAGGCCAGATCACCGAGCACGCAGGCTCGCACACG-A
A-CAAAAGGGCCACTTCAAGTCGAAGAAGTGGCGGCTGGCTCCCTAGCCAAAACATACACCTGGCGCAGACGGACTTGAG
CTTGCTTCATCTTCTCAGCATCCTTGCGC--CTCCCCAACGGACTCCACTGCTGCAAGAATAAGTTGCATTTGTAGATGA
TATTAGCCGGGTGAGTCGGGAAGATCCCCTCGATAGCTATTTTGTTCCTAGTTAACCACAGCGCCCAGAACAGTGCCCCG
ACACAGCTCCATAGCACACG-ATTGTTGCTCCTCTGGACGGAGTCAAGGATAGTCGTAAGATCGTTGGATGACCTCGGGT
CCCAGGAGACGCCAGCCGCGGTCCGGACCGTGCTCCAGGCGAACCGGGCCAGCGGGCACCGAAAGAAAACATGGTTCGCG
TCCTCGGCCACGTTACAGATCGCACACATGCTGATTGCCGGTCCTTGCCTTTTAGCCACATTTTCAGAGGTGGGCAATCC
GTTTCTGAACAGCTGCGAGAAAAACACCTTGATTTTGAGCGGG-GACGCGCTTTCCATATCCCCTTTGCCATTGGGAGGG
TCGGTCC-------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr6D_1586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------TTTATTTTAGAACGAAGACGCTAGGGGCGTCCGGCTTTAAATTAATAAAGCCCACAACATA
GGCAGTGTATCAACCACAGTCAACTTAC---AAGAGCACGG-TGGCTCAGGCCACATAGACACGACAGATAGAGGTTCA-
GACGGCCAAAAGAAGCGCGAGCGAGACAGT-TACATGGCCC-C-AGGCCAGATCATAGAGTACGCAGGCTCGCTCATACG
A-CAAAAGGGCCACTTCACGTCGGAGAAGTGGCATCTGGCTCCCTTGCCAAAACGTAGACCTGACGCAGACGGTCTTGAG
CTTGCTTCATTTTCTCAGCATCCTTGCGC--CTCGCCAATGGACTCCACTTCTGCAGGAAGAGGTTGCATTTGTAGATTA
AGTTAGCTGGATGAGTCGGGAAGATCCCCTCGATCGCTAATTTGTTCCTAGTGAGCCAAATAGCCCAGAACAAAGCTCCA
AAACAGCTCCAAAGCACACG-CTTGTTGCTCCCCTGGGCGGAGTCAAGGATGGCCGCCAGGTCAGTGGATGACCGCGGGT
CCCAGGGAGCATCGGCCGCAGCCCTGACTGCACTCCAGGAAAAACGGGCCAGCGGACACCGAAAGAACACGTGATTTGCG
TCTTCGACAATGTTACAAATCGCACAAGTGCCGGTCGACGGGCCATGCCTTTTGACGACATTTGC-GAAGTGGGATGCCT
GTTCCTAAACAGCTGCCAAAAGAACACCTTGATCTTGAGCGGGAGACGCGCGTTCCACAGCCCTTTTGGCACCTGGAGGG
A-------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2D_1586
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------TTAGAACGAAGATGCTAGGGACGTCCGGCTTTAAATTAATAAAGCCCATAACAG-
-ACAGCATACCAACCAAGTTA-TCTTAC---AAGACCACAT-AGGCTCAGGCCAAACTGACACGGGAAGTTAAGGGTTT-
AGCGGCCAAAAGA-GCGCGAGC-GAAGAGT-TATATGGCGC-G-AGGCCAGATCATTGAGCATGCAGGCTCGCACATA-A
A-CAAAAGGGCTACTTCAAGACGGAGAAGTGGCAGTCGGCTCCCTAGCCAAAACATACACCTGGTGCAGACGGTCTTGAG
CTTGCTTCATCTTCTCAGCATCCCTGCGC--CTCGCCAACGGACTCCACTGCTGCAGGAATAAGTTGCATTTGTAGATTA
TGTTAGCCGGGTGAGAGGGGAAAATCCCCTCAATCGCTATCTTGTTCCTAGTAAGCCATAATGCCCAGAACAGAGCCCCA
ACACAACTCCACAGCACCCG-TTTGTTGCTCCTCTGGATGGAGTCGAGGATGGACGTAAGATCATTGGAACACCGCGGGT
CCCAGGAAACGTCAGCCGCAGTCCGGACCACGCGCCAGGCGAAACAGGCCAGCAGTCACCGAAAGAAAACTTGGTTCGCG
TCCTCGGCAACGTTACAAATCGCACACGTGCCGGTTGCCGGGCCTTGCCGTTTGGCCACACTTTTGGAGGTGGGCAGTCT
GTTCCTGAACAGCTGCCAGAAAAACACCTTGATTTTGGATGGGAGGCGCGCTTTCCACAGCCCCTTCGGCATCGGAAGGG
AC------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr3D_1586
TTTTT---------------------------------------------------------------------------
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-------------------------TTAGAACGAAGACGCTAGGAGCGTCCGGCTTTAAATTAATAAAGCCCACAACATA
GGCAGCGTACCAACCAAGTCA-CCTTAC---ATGACACCGAAATGCTTAAGCCAAACTGACACGAAAAGTTTACGGTTT-
AGCGGCCAAAAAA-GCGCAAGC-AAAGAGT-TACATGGCGCAT-AGGCCAGATCACTGAGCACACAGGCTCGCACACA-A
A-CAAAAGGGCCACTTCAAGACGAAGAAGTGGCGGCTGGCTCCCTGGCCAATGCATACACCTGGCGCAGACGGTCTTGAG
TTTGATTCATCTTCTCAGCATCCTTGCGC--CTCGTCAACAGACTCCACTGCTGCAGGAATAAGTTGCATTTATAGATTA
TGTTAGCCGGGTGAGTTGGGAAGATCCCCTCAATCGCTATTTTGTTCCTAGTTAGCCACAATGCCCAGAACAGTGCCCCG
ACATAGCTCCACAACACGCA-TTTGTTGCTCCCCTGGCCGGAGTCAAGGATAGACGTAAGATCGTTGGAAGACCTCGGGT
CCCAGGAAACGCCAGCCGCGGTCCGGACCGCGCTCCAGGTGAAACGGGCCAGCGGGCACCGAAAGAAAACATGGTTCGCG
TCCTCGACAACGTTACATATCGCACACGTGCCGGTTGCTGGTCCTTGCCTTTTGGCCATGTTTTCAGAGGTGGATAGTAT
GTTCCTGAACAACTGCCAGAAAAACACCTTTATTTTGAGCGGGAGGCGCGCTTTCCACAACACTTTTGGCATCGGGAGGG
ACGGTCC-------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr4B_1586
TTTTT---------------------------------------------------------------------------
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-------------------------TTAGAACGAAGATGCTAGGAGCGTCCAGCTTTAAAATAATAAAGTCCACAACAT-
-GCAGCGTAACCAACAAGTCA-ACCGTACAGATAACACCGAAAAGCTCAGGCCAAACTAATGCAAGAAGTTTATGGTTC-
AACTGCCAAAAGA-GCGCGAGC-AGA-AGT-TACATGGCGCGG-AGGCCAGATCACTGAGCACGCAGGCTCGCACGCG-A
A-CAAAAGGGCCACTCCAAGTC-AAGAAGTGGCGGCTGGCTCCCTAGCCATCACGTACACCTGGCGCAAACGGTCTTGAG
CTTGTTGCATCTTCTCAACATCCTTGCAC--CTCGCCAACGGACTCCACTGCTGCAGGAATAAGTTGCATTTGAAGATGA
TATTAGTCGGGTGCGTTGGGAAGATCCCTTCAATAGCAGTTTTGTTCCTAGTTAACCAAAGCGCCCAGAGCAGAGCCCCA
ACGCAGGTCCACAACACTCACTTTGCTGCTCCCCTGGACCGAGTCAAGGATACCCGTAAGATCGCTGGTGGACCGCGGGT
CCCAGGACACGTCAGCCGCGGTCCGGACCGCGCTCCAGGCAAACCTAGCCAACGGGCATCGAAAGAAGATGTGGTTCGCA
TCCTCGACCACGTTGCAGAGCACACACATGCCGTTGGACGGCACCTGCCTTTTAGCCACGTTTTCAGAGGTGGGCAATCT
GTTCCTGAACATTTGCCGAAAGAACACCTTGATCTTCAGCGGGAGACGCGCTTTCCAAAGACCCTTCGCCATCGGCAGGG
TCGGCCC-------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2D_1589
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----------------------TTTTA--AACGAAGATGCTAGGAGCGTTCGGCTTTAAATTAATAAAGCCCACAACATA
GACAGCGTACCAATCAATTCAACCTTAC---ACGACACTGAAATGCTCAAGCCATACAAACGCGGAAAGTTTAGGGTTT-
AACGGCCAAAAGA-GCGCGAGC-AGAGGGT-TACATGGCGCGA-AGGCTAGATTATTGAGCACGCACGCTCGCACACG-G
A-CAAAAGGGCCACTCCAAATC-AAGAAGTGGCAGCTGGCTCCCTAGCCATGACGTACACCTGGCGCAGACGGTCTTGAG
CTTATCGCATCTTCTCAGCATCCTT--GCGCCTCGCCAACCGATTCCACTGCTGCAGGAATAAGTTGCATTTGTAGATGA
TATTAGCCGGGTGGGTCGGGAAGATCCCCTCGATAGCTATTTTGTTCCTAGTTAACCACAGGGCCCAGAACAGTGCCCCA
ACACAGCTCCACATCACACA-TTTATCACTCCCCTAGACCGAGTCCAGGATAGCCACTAGGTCACTGGATGACCTCGGGT
CCCAGGATACGCGAGCCGCGGTCCGGGCCGCGCTCCAAGCAAACCTGGCCAGCGGGCACCGGAAGAATACATGGTTCGCG
TCCTCGGCCACGTTGCAAATCGCACACGTGCCAGTCGACGGCCCTTGCCTTTTAGCCACATTTTCAGAGGTGGGCAAGCT
GTTCCTGAACAGCTGCCAAAAAAACACCTTGATTTTTAGCGGGAGGTGTGCTTTCCAAAGACCCTTCGCCATCGGCAGGG
TCGG----------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_1620
--------------------------------------------------------------------------------
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-------------------------------------------------------TTAAATTAATAAAGCCCACAACATA
GGCAGCGTACCAACCA-AGGCACCTTAC---ATGACATCGAAATGCTCAAGCCAAACAGACGCGGAAAGTTTAGGGTTT-
AGCGGCCAAAAGA-GCGCGAGC-CGAGAGT-TACATGGCGCGT-AGGCCAGACCACTGAGCACGCAGGCTCACACACG-A
A-CAAAAGGGCCACTTCAAGACGAAGAAGTGACGGCTGACTCCCTAGCCAAAACATACACCTGGCGCAGACAGTCTTGAG
CTTGCTTCATCTTCTCAGCATCCTT--GC--CTCGCCAATGGACTCCACTGCTGCAGGAATAAGTTGCATTTGTAGATTA
TGTTAGCCGGGTGAGTCGGGAAGATCCCCTCAATCGCTATTTTGTTCCTAGTTAACCACAGTGCCCAGAACAGTGCCCCG
ACACAGCTCCACAGCACACG-CTTGTTGCTCCCCTGGACGGAGTCAAGGATAGACGTAAGATCGTTGGATGACCTTGGGT
CCCAGGAAACGCCAGCCGCGGTCCGGACCGCGCTCCAGGCGAACCGGGCCAGCGGGCACC-AAAGAAAACGTGGTTCACG
TCCTCGGCAACGTTACATATCGCACACGTGCCGGTTGCCGGTCCTTGCCTTTTGGCCACGTTTTTAGAGGTGGGCAATTT
GTTCCTGAACAACTGCCAGAAAAACACCTTGATTTTGAGCGGGAGGCGCGCTTTCCATAGCCCCTTTGCCATTGGGAGGG
TCGG----------------------------------------------------------------------------
----------------------------------------------------------------------------
>chrUn_1692
CAATAC--------------------------------------------------------------------------
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---------------------------------------------------------TGTCACGGAGAGTTTAAGGTTT-
AGCAGCCAAAAGA-TCGCGAGC-GAAGAAAATACATGGCAC-G-AGGCCAAATCATTAAGCACGCAGGCTCGCACACA-A
ACCAAAAGGACCACTTCAAGACGAGGAAGTGGCGGCTGGCTCCCTAGCCAAAATGTACACCTGACGCAGACGGTCTTGAG
CTTGCTACATCTTCTCAGCATCCTT--GCGCCTCGCCAACGGACTCCACTGCTGCAGGAAGAGGTTGCATTTGTAGATTA
TGTTAGCCGGATGAGTCGGGAAGATCCCCTCAATTGCTAATTTGTTCCAAGTAAGCCATAAAGCCCAGAACAGTGCCCCA
ACACAGCTCCACAACACGTG-CTTGTTACTCCCCTGGACGGAGTCGAGGATGGACGTAAGATCATTAGCTGATCAAGGGT
CCCAGGAAACGTCAACCGCGGTCCGGACCGCGCTCCAAGCAAAACGGGCCAACGAGCACCGAAAGAAAACGTGGTTCGCG
TCCTCGGCAGCGTTACAAATCACACATGTGCCGGTTGCCGGGCCTTGTCGTTTGGCCACATTTTCAGAGGTGGGTAGTCT
GTTCCTGAACAACTGCCAGAAGAACACCTTGATCTTGAGCGGAAGGCGCGCATTCCACAGCCCTTTTGGCACCTGGCATG
GACGGGCC------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
----------------S---------S---S-------------------S-----S---------S--S-------S--
-----------------S-S------------S-------------------S---------------------------
---S------------------S--------------------------S------------------------S-----
---------S-----------------------------------S---------------------------------S
----S----S-------------S---------------------------SSSS--SSS--------------------
--------------------------------------------------------------------------------
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--------------------------S---SSSS-----S------------------------S--------SSSSSSS
--------------------------------------SS------------------S---------------------
----SS-S--------------S----------S--S-S--------S-----------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--S-------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------------SS------------------------------------------------------
------------------S------------------------SS-----------------------------------
-----------------------------S--------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
------SS--SSSS-S-SS-----------------------------------------------------S----S--
---------------SS--------------------------------------------------------------S
--S------------------S-----------------S------------------------S---------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
----S----------------------------------S-------S--------------------------------
---------------------------------S----S---------------------------------------S-
----S------S--------------------------------S------S----------------------------
-----------------------------------------S-------S------------------------------
------------------------------------------------------------------S-------------
----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_183
--------------------------------------------------------------------------------
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---GAACACTGTCAGTTCCCCGA---------------------------------------------------------
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>reverse_3960
--------------------------------------------------------------------------------
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---------------------------------------TCGAGGCCAGATCATTGAGC---------------------
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----------------------------------------------------------------------------
