>input_sequence_78048
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--------------------------ATGCACCGGATCAG-TGGAGGCCGGATCAGTGGAGACCA-------GCGGCGGA
TCA------GTGCCAGGGCGGCGGCGAAGGGATGG--------------------------------------------A
GCGGCGGCGGTGAAGGGATGAAGAGCGGCGGCG------------------------GGCGAATGAGGGCACAGACTCGG
TCGTCTGTTTCTCGCTCGAGGG-CACGAGACCTCGCTCGTACGTGCGGGGGATTGGTTT-GTGA--TTTATTTTCGCTGG
TTAATTTTCGCCGGG-TTTTTCTCGCTGGTTAATTTTCGCCGGTTTGTTCGTGTCAG-----ATGGGTGTGAAGGGAGGT
TAGGCGCGTGGGGGCGGATGTGGGACTCGGCCCTGA-GGGTTTTTCTTGGTTCATCGCGGCTGAGCGGGAGGTGGGAGCA
GGTACCAAAAAA-------------ACCGGGTGAGGTGGGACGAAAGTTAAACCCGG-AATGCGACCTACCAACTGAGAT
ATTAGGAGTAGAGATTGCGCTGTCCTTTCCAATTACTTCTGTTGTCTTACTCTTATCATTAAACCCCCACTACACCTAA-
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---------------------------------------
>chr3A_1_TraesCS3A01G227600
TACTTTTCTGGTTTCATTTTAACTATCATGGAACAAGTTACTTTTCTGGTTTAGTGTATCTTTTTGCTTCTACCTTGAAC
TAAGCGCAATTGCTTTATTATAAACAATTGATCCAAAATGCATAGTGCATCTTATTGTTCGGCGAAAAACTTTCCTGGTC
GACACTATAGCTAAACCATCTTTTCACAAAATCCTGCTATTCTCTCTGTACATTTGCTTCACTTATTTTGTTGTCTTAGT
TTGATAATTCGGTTATGGTTGAAAAATGTAAAAAGATTAGTGTCCTGTTTATTGTGTTTCCGTGTGAACTTGTTCTGAAC
AGCACGTGCTGAACCTTATGGTTTGCAGTTTTGTCAGAGATATGTTTTGCTAGGCTGGAGGCTTGTGAGATCTTCAGATT
ATCCTAATTGCTTCTACATAGAAGGTGCAGCCGTCGCATGGTTCCAAATGTCTCATTGATCCAAAATGCATAGTGCATCT
ATTTGCTTTCCTGGTTGACACTATAGCTAAACCATTGCTTC-ACGAAATCATGCTATGCTCTCTGTACGTTTGCTTCACT
TATTAT------------------------------------------------------------------GTTTGGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATTTGTTATTTCGGTTATGGTTGAAAAATGCAAAA
AGATTAGCTGTTTTACTTATTCTGAACCTTACGTGCTGTTGTTTTACTTTGCAGTTTTGGT----------------TGG
CTGATAGCTTGCAAGATCTTCATAT-------------TCTACATAGAAGGTGCAGTGTGATGTGATGCATATGGAACTG
GTATTACTTTGCAGTATGGAACTGGC-------------------------------------------------GGTGG
GTGTATGAAATGTGATGGCTGTAAC------ATTATACCTAATTTCTTA----TCAGTTCATGATATGGCTGTTTGAAAT
GTGATACCTGGATGTGAGTGTCTCTGGCGCGGGATCCTGGACGCCTCCGGCGGCGGCTGGTGAAAGGGATAG------AC
GG---------ATCCTGGACATCTTCGGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCGGATCCTGGAAGC
GTTCGGCTGAGGGTCCTCAACTGGACATGCACCGGATCAG-TGGAGGCCGGATCAGTGGAGACCA-------GCGGCGGA
TCA------GTGCCAGGGCGGCGGCGAAGGGATGG--------------------------------------------A
GCGGCGGCGGTGAAGGGATGAAGAGCGGCGGCG------------------------GGCGAATGAGGGCACAGACTCGG
TCGTCTGTTTCTCGCTCGAGGG-CACGAGACCTCGCTCGTACGTGCGGGGGATTGGTTT-GTGA--TTTATTTTCGCTGG
TTAATTTTCGCCGGG-TTTTTCTCGCTGGTTAATTTTCGCCGGTTTGTTCGTGTCAG-----ATGGGTGTGAAGGGAGGT
TAGGCGCGTGGGGGCGGATGTGGGACTCGGCCCTGA-GGGTTTTTCTTGGTTCATCGCGGCTGAGCGGGAGGTGGGAGCA
GGTACCAAAAAA-------------ACCGGGTGAGGTGGGACGAAAGTTAAACCCGG-AATGCGACCTACCAACTGAGAT
ATTAGGAGTAGAGATTGCGCTGTCCTTTCCAATTACTTCTGTTGTCTTACTCTTATCATTAAACCCCCACTACACCTAAA
TTCTCGGGCTTGTGATGATTGAACTCTTTTTAAGGGGTGGTGCACACTACACAGACTGATTCCTTCTATAGCATTTTTGT
TAGACAAATTCTTTATAAAGCAAATGGTCTACACACTTTTTTTGTGGTTGAGAAAATGGTGTACACAATTTTTTTGAGAG
TTTGGTATACACACTAATACATCGCTCTCCGTGGGATGGGCCCGGCTCCTCGCTTGCTCAATTACTTCATGGGCCAGCGC
CCAGCCTGCCCTGTCCCTTCCTTTCCAATTCGGGAGCTCTTCGCCCACTGCGCCAAGATGCCCCTGTAGCGCTTGCTAGA
TAGCTCGTGGGCCACGGCCCAGCCTGTGCCCTCGCTCGGCCGCCTTCCCGGGCGTGCCTATGCCTCTATTTAAAAAAAAA
GCTAGAAGCGAGAGCAACTAATAAGTGTACCCCTTGCAGGAGCCTCGCAATGGTCACTTTTGGTGGTAAGAGCATGTCAT
TTGGCGTGCTCTCAGCCACCGTCACGTGTCGCGTGTTGGGCTCTCCATCGGAATGGTTTTTTCTTTGTTTTCATATGCAT
TTTTGGGGTTTAGATGATTTTTTCCGTGTTCTTTCGTATTTTGGTTTTTCCTAGATTTTGAAGAAAAAAATTGATTCTTT
TTTGCTTGAAATAAACGTGTTTTCTTTTGCTTCCACGAGCGGCATAGTTGTGTTTCTTTGAAAAGAAAAGACACATGTAT
TTTTTTGCTTCCACGGGAGGCACAGAGTTGCTTCGTGTGAAGATACAGATTTGCATCCGCAAGAGGCTGAAAGCGCAACC
AATCCCCGGATGGTTTTGGTAATTCATAACAATATATATCTCATTGAACTAATATCCATTCAAGATAAATATTTCAGGAT
GTTCAATGTTTGGCATGGTATGGAATAGAGATGTAGACCCCTGAAAATGATAAGGACAAAGATTGGCAAAAGCTCAAGGC
TTTACATTTGAAATTACCTCATCATGGCCGGCTCGACTA
>chr3A_1
TACTTTTCTGGTTTCATTTTAACTATCATGGAACAGGTTACTTTTCTGGTTTAGTGTATCTTTTTGGATCTACCTTGTAC
TAAGCGCAATTGCTTTATTATAAACCATTGATCCAAAATGCATAGTGCATCTTATTGTTCGGCGAAAAACTTTCCTGGTT
GACACTATAGCTAAACCATCTTTTCACAAAATCCTGCTATTCTCTCTGTACATTTGCTTCACTTATTTTGTTGTCTCAGT
TTGATAATTCGGTTATGGTTGAAAAATGTAAAAAGATTAGTGTCCTGTTTATTGTGTTTCTGTGTGAACTTGTTCTAAAC
AGCACGTGCTGAACCTTATGGTTTGCAGTTTTGTCAGAGATATGTTTTGCTAGGCTGGAAGCTTGCGAGATCTTAAGATT
ATCCTAATTGCTTCTACATAGAAGGTGCATCCATCGCATGGTTCCAAATGTCTCATTGATCCAAAATGCATAGTGCATCT
ATTTGCTTTCCTGGTTGACACTATAGCTAAACCATTGCTTC-ACGAAATCATGCTATTCTCTCTGTACATTTGCTTCACT
TATTAT------------------------------------------------------------------GTTTGGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATTTGTTATTTCGGTTATGGTTGAAAAATGCAAAA
AGATTAGCTGTTTTACTTATTCTGAACCTTACGTGCTGCTGTTTTACTTTGCAGTTTTGGT----------------TGG
CTGATAGCTTGCAAGATCTTCATAT-------------TCTACATAGAAGGTGCAGTGTGATGTGATGCATATGGAACTG
GTATTACTTTGCAGTATGGAACTGGC-------------------------------------------------GGTGG
GTGTATGAAATGTGATGGCTGTAAC------ATTATACCTAATTTCTTA----TCAGTTCATGATATGGTTGTTTGAAAT
GTGATACCTGGACGTGAGTGTCTCTGGCACGGGATCCTGGACGCCTCCGGCGGCGGCTGGTGAAAGGGATAG------CC
GG---------ATCCTGGACGTCTTCGGCGACGGGTCCTGGAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCGGATCCTGGAAGC
GTTCGGCGGAGGGTCCTCAACTGGACATGCACCGGATCAG-TGGAGGCCGGATCAGTGGAGACCA-------GCGGCGGA
TCA------GTGCCAGGGCGGCAGCGAAGGGATGG--------------------------------------------A
GCGGCGGCGGTGAAGGGATGAAGAGCGGCGGCG------------------------GACGAATGAGGGCACAGACTCGG
GTGTCTGTTTCTCGCTCGAGGG-CACGAGACCTCGCTCGTACGTGTGGGGGATTGGTTT-GCGA--TTTTTTT-CGTTGG
TTAATTTTCGCCAGGTTTTTTTTCGTTGGTTAATTTTCGCCGGTTTGTTCGTGTTAG-----ATGGGTGCGAAGGGAGGT
TAGGCGCGTGGGGGCGGATGTGGGACTCGGCCCTGA-GGGTTTTTCTTGGTTCATCGCGGCTGAGCGGGAGGTGGGAGCA
GGTACCAAAAAAG------------ACCAGGTGAGGTGGGACGAAAATTAAACCCGG-AACGCGACCTACCAACTGAGAT
ATTAGGAGTAGAGAT-----------------------------------------------------------------
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---------------------------------------
>chr6A_1
TACTTTTATGGTTTCATTTTAACTTTCATGGAACAGGTTACTTTTCTGGTTTAGTGTATCTTTTTGGACCTACCTTGAAC
TAAGCGCAGTTGCTTTATTATAAACCATTGATCCAAAATGCATAGTGCATCTTATTGTTCGGCGAAAAACTTTCCTGGTT
GACACTATAGCTAAACCATCTTTTCACAAAGCCCTGCTATTCTCTCTGTACATTTGCTTCACTTATTTTGTTGCCTCATT
TTGATAATTCGGTTATGGTTGAAAAATGTAAAAAGATTAGTGTCCTGTTTATTGTGTTTCTGTGTGAACTTGTTCTGAAC
AGCACGTGCTGAACCTTATGGTTTGCAGTTTTTTTAGAGATATGTTTTGCTAAGCTGGAAGCTTGCGAGATCTTCAGATT
ATCCTAATTGCTTCTACATAGAAGGTGCAGCCATCGCATGGTTTCAAATGTCTCATTGATCCAAAATGCATAGTGCATCT
ATTTGCTTTCCTGGTTGACACTATAGCTAAACCATTGCTTC-ACGAAATCATGCTATTCTCTCTGTACATTTGCTTCACT
TATTAT------------------------------------------------------------------GTTTGGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATTTGTTATTTCGGTTATGGTTGAAAAATGTAAAA
AGATTAGCTGTTTTACTTATTCTGAACCTTACGTGCTGCTGTTTTACTCTGCAGTTTTGGT----------------TGG
CTGATAGCTTGCAAGATCTTCATAT-------------TCTACATAGAAGGTGCAGTGTGATGTGATGCATATGGAACTG
GTATTACTTTGCAGTATGGAACTGGC-------------------------------------------------GGTGG
GTGTATGAAATGTGATGGCAGTAAC------ATTATACCTAATTTCTTA----TTAGTTCATGATATGGCTGTTTGGAAT
GTGATACCTGGACGTGAGTGTCTCTGGCGTGGGATCCTGGACGCCTCTGACAGCGGCTGGTGAAAGGGATAG------CC
GG---------ATCCTGGACGTCTTCAGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ACCGGCGCCGGATCTTGGAAGC
GTTCGGCGGAGGGTCCTCAACTGGACATGCACCGGATCAG-TGGAGGCCGGATCAGTGGAGACCA-------GCGGCGGA
TCA------GTGCCAGGGCGGTGGCGAAGGGATGG--------------------------------------------A
GCGGCGGCGGTGAAGGGATGAAGAGCGGCAGCG------------------------GGCGAATGAGGGCACAGACTCAG
GCGTCTGTTTCTCGCTCGAGGG-CACGAGACCTCGCTTGTATGTGCGGGGGATTGGTTT-GCGA--TTTTTTTTCCCTGG
TTAATTTTTGCCAGG-TTTTTTTCGCTGGTTAATTTTCGCCGGTTTGTTCGTGTTAG-----ATGGGTGCGAAGGGAGGT
TAGGCGCGTGGGGGCGGATGTGGGACTCGGCCTTGA-GGGTTTTTCTTGATTCATCGCGGCTGAGCGGGAGGTGGGAGCA
GGTACCAAAAAAG------------ACCGGGTGAGGTGGGACGAAAATTAAA-CCCGAAACGCGACCTACCAACTGAGAT
ATTAGGAGTAGAGA------------------------------------------------------------------
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---------------------------------------
>chr7A_1
TACTTTTCTGGTTTCATTTTAACTATCATGGAACAGGTTACTTTTCTGGTTTAGTGTATCTTTTTGGATCTACCTTGAAC
TAAGCGCAATTGCTTTATTATAAACCATTGATCCAAAATGCATAGTGCATCTTATTGTTCGGCGAAAAACTTTCCTGGTT
GACACTATAGCTAAACCATCTTTTCACAAAATCCTGCTATTCTCTCTGTACATTTGCTTCACTTATTTTGTTGTCTCAGT
TTGATAATTCGGTTATGGTTGAAAAATGTAAAA-GATTAGTGTCTTGTTTATTGTGTTTCCGTGTGAACTTGTTCTGAAC
AGCACGTGCTGAACCTTATGGTTTGCAGTTTTGTCAGAGATATGTTTTGCTAGGCTGGAAGCTTGCGAGATCTTCAGATT
ATCCTAATTGCTTCTACATAGAAGGTGCAGCCATCGCATGGTTCCAAATGTCTCATTGATCCAAAATGCATAGTGCATCT
ATTTGCTTTCCTGGTTGACACTATAGCTAAACCATTGCTTC-ATGAAATCATGCTATTCTCTCTGTACATTTGCTTCACT
TATTAT------------------------------------------------------------------GTTTGGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------ATCTGTTATTTTGGTTATGGTTGAAAAATGCAAAA
AGATTAGTTGTTTTACTTATTCTGAACCTTACGTGCTGCTGTTTTACTTTGCAGTTTTGGT----------------TGG
CTGATAGCTTGCAAGATCTTCATAT-------------TCTACATAGAAGGTGCAGTGTGATGTGATGCATATGGAACTG
GTATTACTTTGCAGTATGGAACTGGC-------------------------------------------------GGTGG
GTGTATGAAATGTGATGGCTGTAAT------ATTATACCTAATTTCTTA----TCAGTTCATGATATGGCTGTTTGAAAT
GTGATACCTGGACGTGAGTGTCTCTGGCGCGGGATCCTGGACGCCTCCGGCGGCGGCTGGTGAAAGGGATAG------CC
GG---------ATCCTGGACGTCTTCGGCGACGGGTCCTGAAAGGGATCGGCGCCGGATCCTGGACGTCTTCGGCGACGG
GTCCTGAAAGGGATCGGCGCCGGATCCTGGACGTCTTCGGCGACGGGTCCTGAAAGGGATCGGCGCCGGATCCTGGAAGC
GTTCGGCGGAGGGTCCTCAACTGGACATGCATCAGATCAG-TGGAGGCCGGATCAGTGGAGACTA---------------
-----------------GCGGCGGCGAAGGGATGG--------------------------------------------A
GCAGCGGCGGTGAAGGGAAGAAGAGCGGCGGCG------------------------GGCGAATGAGGGCACAGACTCGG
GCATCTGTTTCTCGCTCGAGGG-CACGAGACCTCGCTCGTACGTGCGGGGGATTGGTTT-GCGA----TTTTTTCGCTGG
TTAATTTTCGCCGGG-TTTTTTTCGCTGGTTAATTTTCGCCGGTTTGTTCATGTCAG-----ATGGGTGCGAAGGGAGGT
TAGGCGCGTGGGGGCGGATGTGGGACTCGGCCCTGA-GGGTTTTTCTTGGTTCATCACGGCTGAGCGGGAGGTGGGAGCA
GGTACCAAAAAAG------------ATCGGGTGAGGTGAGACGAAAATTAAA-CCGG-AACGCGACCTACCAACTGAGAT
ATTAGGAGTAGAGA------------------------------------------------------------------
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---------------------------------------
>chr3D_486
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-----CTTTTCTGGTTGACACTATAGCTAAACCATTGCCATCCTGTGATCCTGCTATTCTCTCTGTACATTTCTTAATTC
GGTTGTGGTTGAAAAATGCAAAAAGATTAGTGTCCTATTCTGAACCTTACGTGCTGCTGTTTTAATTT-GCAGTTTTGTC
AGATATATGTTTTGGCTGT---GTAGCTTGCAAGATCTTCAGATTCTACTATTTGCTTCTACAAAGAAGGTGCAGCCACC
ACATGGTTCCAAATAGTAGAACC--------------------TATGGCTGTATGGAACTGGTATCTTTTCAGTTCATGG
GAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GTTTTGGT----------------TGC
CTGGTAGCTTGCAAGATCTTCAGATTCTACTATTTGCGTCTACATAGAAGGTGCAGCCATCACATAGAAGATCTTCGGAT
TCTACTATTTGCGTTTACTATTGATGCAGTGTCCTGTAATGCCTGTGATGGTTGTACATTATTATCTGTTTATGGGGTGG
GTGTATGAAATGTGATGGCCGTAAAAATCAAATTATACCTAATTTCTTA----TCTGTTCATGAGATGGTTGTTTGAAAT
GTGATACCTGGACGTGAGTGTCTCTGGCGCCGGATCCTGGACGCCTTCGGCGGCGGCTGGTGAAAGGGATAG------CC
GG---------ACCCTGGACGTCTCCGGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCGGATCCTGGAAGC
GTTCGGCGGAGGGTCCTCAACTGGACCAGCGCCGGATCGG-TGGAGGCCGGCGGTTTTTATGTGCGAGTTACGCGCCGGA
TCA------GTGCTAGGGCGGCGGTGAAGGGATGG--------------------------------------------A
GCGGTGGCGGTGAAGGGACGAAGGGCGGCGGCGG------------------------ACGAAGGAGGGCACAGAGTCGG
GCGACTGTTTCTCGCTCGAGGG-CACTAGACCTCGCTCGAGGGCGCAGA------GTCGGGC-GATTTTTTCC-CGCTGG
TTAATTTTCGCCGGT-TTGTTTTCGCTGGTTTATTTTCG--------TTCGTGTCAG-----TTGGATGCGACGGGAGGT
TGGGCGCGTGGGGGCAGGTGGGGGACTCGGCCG-GA-GGGTTTTTCTTGGTTCATCGCGGCTGAGCGGGAGGTGGGAGCA
AGTACCAAAGAAGTACCAAAAAA-GACCATAGTAGGTGGGACGAAAATAAAATCCGG-AAGGGAGACTACCAACTGAGAC
ATTAGAAGTA----------------------------------------------------------------------
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>chr5B_486
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-----CTTTTCTGGTTGACACTATAGCTAAACCATTGCCATAATGTAATCCTGCTATACTCTCTGTACATTTAATATTTA
GGTTGTGGTTGAAAAATGCAAAAAGATTAGTGTCCTGCTCTGAACCTTAGGTGCTGCTGTTTTAATTTTGCAGTTTGGTC
AGAATTATCTTTTGGCTGTCTGGTAGCTTGCAAGATTTTCAAATTCTACTATTTGCTTCTACAAAGAAGGTGCAACCATC
ACATGGTTCCAAATGTCTCATTGATGCAGTCTGATGTGATGCATATGGCTATATGGAACTGCTATGTTTACAGTTCATGA
GATGTTTTGGTTGGTTGGTAGCTTGCAAGATCTTCAGAATCTACCATTTGTGGAATAGGTTACTTTTTTGGTTGGCACTA
TAGCTAAACCATTGCCATCCTGTAATCCTGTTATTATCTCTGTACATTTGTTAATTCGGTTGTGGTTGAAAAATGCAAAA
AGATTAGTGTCCTG-----TTCTGAACCTTACGTGCTGCTATTTTAATTTGCAGTTTTGTCAGAGTTATCTTTTGGCTGG
CTGGTAGCTTGCAAGATCTTCAGAC-------------TATACTAATGTCTCATTGATGCCTGTGATGCATGTGATGCCT
GTGATGCCC--------------------------GTGATGCCTGTGATGGCTGT-------------TTCATGGGGTGG
GTGTATGAAATGCGATGGATGTAAAATTCAAATTATACCTAATTTCTTA----TCTGTTCATGAGATGGCTGTTTGAAAT
GTGATACCTGGACGTGAGTGTATCTGGATGCGGATCCTGGACGCCTTCGGCGGCGGCTTGTGAAAGGGATAGCCAGCAAC
GG---------GTCCTGGACGTCTCCGGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCGGATCCGGGAAGC
GCTCGGCGGAGGGTCCTCAACTAGACCAGCGCCAGATCAG-TGGAGGCCAGCAGTTTTGATGTGCGAGTTACGCGCCGGA
TCA------GTGCCAGGGCGGCGGTGAAGGGATGG--------------------------------------------A
GCGGTGGTGGTGAAGGGTCGAATGGCGGCGGCG------------------------GGCGAAGGAGGGCACAGAGTCGG
GCGACTGTTTCTCGCTCAAGGG-CACGAGACCTCGCTCGAGGGCGCACA------GTCGGGC-G--TTCTTTTTCACTGG
TTAATTTTCGCCGGT-TTGTTTTCGCTGGTTTATTTTCG--------ATCGTGTCAG-----CTCATTGCGACGGGAGGT
TGGGCGCGTGGGTGCGGGTGTGGGACTCGGTCACC--GGGTTTTTCTTGGTTTTTCGGGGCTGAGTGGGAGGTGGGGGC-
----------AAGTACCAAAAAA-GACCATAGTAGGTGGGACGAAAATAAAACCTGG-AACGAAGACTACCAACTGAGAC
ATTAGGAGTAGAGATAGC--------------------------------------------------------------
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---------------------------------------
>chr5D_767
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---------------------------------------------------------------------------GGTGT
GTGTATGAAATGTGATGGCTGTAAAATTCAAATTATACCTGGACGTGAGTGTCTCTGTTCATGAGATGGCTGTTTGTAAT
GTGTTTCCTGGACGTGAGTGTCTCTGGCGCCGGATCCTGGACGCCTAAGGCGGTGGCTGGTGAAAGGGATCC------AC
TG---------ATCCTGGAAGTCTCCGGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCGGATCCTGGA---
-------------------------CTAGCGCCGGATCAG-TGGAGTCCGGCGCTTGTGATGTGCGATTTACGCGCCGGA
TCA------GTGCCAGGGCGGCGGTGAATGGAACG--------------------------------------------A
GCGGTGGCGGTGAAGGGACGAAGGGCGGCGGCGGTGAAGGGACGAAGGGAGGCGGCTGGCGAAGGAGGGCACAGAGTCGG
GCGACTGTTTCTCGCTCGAGGG-CACGAAACCTCGCTCGAGGGCGCAGA------GTCT-CCGG--TTTTTTTTCGCTGG
TTAATTTTCGCCGGC-TTTTTTTCGCTGGTTTAATTTCA--------TTCGAGTCAG-----TTGGATGCGACGGGAGTT
TGGGTGCGTGGGGGCGGGTGGGGTACTCGGCTG-GAGGGTTTTTTTTTGGTTCATTGCGGCTGAGCGGGAGGTGGGAGCA
AGTACCAAAGAAGTACCAAAAAA-GACCATAGTAGGTGGGACGAAAATAAAACCCGG-AACGGAGACTACCAACTGAGAC
ATTAGGAGTAGAGAT-----------------------------------------------------------------
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---------------------------------------
>chr2B_797
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-------------------------------ATTATACAAAATTTGAAA----CCAGTACATTAGATGGCTGTTTGAAAT
GTGATACCTGGACGTGAGAGTCTCTGGCGCCGGATCCTGGACGCGTACGGCGGCGACTGGTGAAAGGGATAG------CC
GG---------ATCCTGGACGTCACCGGGGATGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCTGCGCCGGATCCTGAAAGC
GTTCGGATGAGGGTCCTCAACTGGACCAGCGCCGGATGAG-TGGAGG-----------------------ACGGGCCGGA
TCA------GTGGCAGGGTGGCGGCGATGGGATGCAGCGATGGCGGCGATGGGATGCAGCGGTGGCGGCGATGGGATGCA
GCGGTGGCGGTGAAGGGACGAAGGGCGGCGGCGG------------------------GCGAAGGAGGGCACAAAGTCGC
GGGTCAGTTTCTCGCTCGAGGG-CAAGAGACCTCGCTCGTACGTGCGGGGGATTGGTTT-GCGA--ATTTTTTACGCTGG
TTAAATTTCGCCGGT-TTGTTTATGCTGGTTAATTTTTGCTGGTTAAATTTCGTCAGACAACATGGGTGCGACGAGAGGT
TGGGCGGGTGGGGGCGGGTGGGGGACTCGGACG-GA-TGGTTTTTTCTGGTTCATCGCGGCTTAGCGGGAGATGGGAGCA
AGTACCAAAA------------AGTACCATAGTTGGCGAGACGAAAAT-AAATCCGG-AACAGAGACTACCAACTGAGAC
ATTAGGAGTAGAGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr2B_797
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-------------------------------ATTATACAAAATTTGAAA----CCAGTACATTAGATGGCTGTTTGAAAT
GTGATACCTGGACGTGAGAGTCTCTGGCGCCGGATCCTGGACGCGTACGGCGGCGACTGGTGAAAGGGATAG------CC
GG---------ATCCTGGACGTCACCGGGGATGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCTGCGCCGGATCCTGAAAGC
GTTCGGATGAGGGTCCTCAACTGGACCAGAGCCGGATGAG-TGGAGG-----------------------ACGGGCCGGA
TCA------GTGGCAGGGTGGCGGCGATGGGATGCAGCGATGGCGGCGATGGGATGCAGCGGTGGCGGCGATGGGATGCA
GCGGTGGTGGTGAAGGGACGAAGGGCGGCGGCGG------------------------GCGAAGGAGGGCACAAAGTCGC
GCGTCAGTTTCTCGCTCGAGGG-CAAGAGACCTCGCTCGTACGTGCGGGGGATTGGTTT-GCGA--ATTTTTTACGCTGG
TTAAATTTCGCCGGT-TTGTTTATGCTGGTTAATTTTTGCTGGTTAAATTTCGTCAGACAACATGGGTGCGACGAGAGGT
TGGGCGGGTGGGGGCGGGTGGGGGACTCGGACG-GA-TGGTTTTTTCTGGTTCATCGCGGCTTAGCGGGAGATGGGAGCA
AGTACCAAAA------------AGTACCATAGTTGGCGAGACGAAAAT-AAATTCGG-AACGGAGACTACCAACTGAGAC
ATTAGGAGTAGAGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr1D_827
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-----------------------------------------------------------------ATGGATGTTTGTAAT
GTGATACCTGGACGCGAGTGTCTCTGGCGCCGGATCCTGGACGCCTAAGGCGGCTACTGTTGAAATGTGTAG------CC
GGATCCTGGACGTCCTGGACGTCTCCGGCGACGGGTCCTGACCAGG----------------------------------
----------------------------------------------------------ATCGGCGCTGGATCCTGGA---
-------------------------CCAGCGCCGGATCAG-TGGAGGCCGGCGCTTGTGATGTGCGATTTACGCGCCGGA
TCA------GTGCCAGGGCGGCGGTGAATGGATGGAGCGGGGGCGGCGAAGGGACGAAGG--------------------
GCGGCGGCGGTGAAGGGACGAAGGGAGGCGGCGG------------------------GCGAAGGAGGGCACAGAGTTGG
GCGACTGTTTCTCACTCGAGGG-CACGAAACCTCGCTCGAGGGCGCAGA------GTGGGGCGA--TTTTTTTTTGTTGG
TTAATTTTCGCCGGC-TTGTTTTCACTGGTTTATTTTCG--------TTTAGGTCCG-----TTGGATGCGACGGGAGAT
TGGGCGCGTGGGGGCGGGTGGGGTACTCGGTTG-GAGGGT--TTTTTGGGTTCATTGCGACTGAGCGGGAGGTGGGAGCA
AGTACCAAAGAAGTACCAAAAAAATACCATAGTAGGTAGGACGAAAATAAAACCCGG-AACGGAGACTACCAACTGAGAC
ATTAGGAGTAGAGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr2D_841
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-------------------------------------------------------------------------------T
GTGATACCTGGA-GTGAGTGTATCTGGCGGCGGATCCTGGACGCCTTCGGCGGTGGCTCGTGAAAGGGATAG------CC
GGCGCC---ACGTCCTGGACGTCTCCGGCGACGGGTCCTGAAAGGG----------------------------------
----------------------------------------------------------ATCGGCGCCAGATCCTGGAAGC
GCTCAGCGGAGGGTCCTGCACGGGACCAGCGCCGGATCAAATGGAGTCCAGCGGTTTTGATGTGCGAGTTACGCGCCGGT
GGTTTTGATGTGCCAGGGCGGCGGTGCATGGATGGAT-------------------------------------------
-CGGTGGCGGTGAAGAACCGAAGGGCAGCGGTGG------------------------GC------------AGTGTCGG
GCGACTGTTCCTCGCAAGAGGAACACGAGACCTCGCTCGAGGACGCACA------GTCGGGCGT--TTTTTTTTCGCTGG
TTAATTTTCGCCGAT-TTGTGCTCGGTGGTTTATTTTCG--------ATCGTCTCAG-----TTAATTACGACGGGAGGT
TGGGCGTGTGCGGGACTCGATCCC------------GGGGTTTTCATTGGTTTTTCGCGGCTGAGCGGGAGGTGGGAGCA
AGTACCAAAGAAGTACCAAA-AAAGACCATATTAGGTGGGACGAAAATAAAACCCGG-AACGCGGACTACCAACTGAGAC
ATTAGGAGTAGAGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>SNPs
-----------------------------------S------------------------------SS------------
-------------------------S-----------------------------------------------------S
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------------------------------------------------S-----S--------------
--------------------------------S-----------------------------------------------
---------------------------------------------------------S----------S-----------
--------------------------------------------------------------------------------
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--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
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------------S-------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
S------------------------------------------------------------S-------S----------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------------------S-------------S-------------------
---------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_160
--------------------------------------------------------------------------------
-----------------------------------------------------------CGGCGAAAAACTTTCCTGGTC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_2196
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GGTGGTGCACACTACACAGA-------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------
