>input_sequence_78039
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-------------------------------------------------------ATGACGCCTACCCGCTACCTCGCGG
CGCTGGCCGCCGCCGCCGCGCTACTCTTCATGCTCGGCGGCCTGCACGGCGTCGAAGCGGGGCCGGCGGACACCGACTGC
GCCGTCGCCCAGACGGCGTTCGGCGACTGCACCGGATACGTCGCCGGCGTGGAGGACAAGCTCTCGCCTCGCTGCTGCAG
GGGGCTCGCCGACATCAGGGACATGGCGCCGACCTTTGACCGGCGGCGCGCCCTCTGCGCGTGCATCCACAAGGAGATGC
TCGCCGCCGGCAAGGTGGTCACCCGCCGCGCCGCCACGCTCTCCGCCAGGTGCGGCGTCCGTATCTCCTTCCTCCCGACC
GCCCACGCCTTCGACTGCTATCGGTACGTACCTCGAGAAAACATGCGTGCTCCAAACTTTGTTCATGCCAGATGCTTCAA
TAATCGTGTTCGTAATTTGTTTTCCAAAAGGTGAATAGATAAAAATGCTTAGTCCCTTTGCAGGATTCCGCGAACTGATT
GA------------------------------------------------------------------------------
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--
>chr7D_1_TraesCS7D01G110800
TACTAGGCCGGCCCACTCTATGTGTCTTTGACACATCGCCGCCTTCCACCTCGCACTAAGCGAGGCATAGGTGCACCCGT
TAAGTGCAAGCCCAGGACATGAGTGTGTAGGCGGCGGAAATGAGTCATGGGGCAGGGCCTGGGTGGGCTTTGATTTATGT
AACTCCATGCTAAGGCTTAGCCTAGTTGGAGTTATCCTAAAAAAAGCTAGTTGGAGTAATAGCACCTCTTGACTTTTCAA
AAAGGGGACGCATCTATTAAAAGAGTTCAATAGAAGTACAAACGCATCCCAAATATAATAAAATTACATCAAGGTCTCTA
ACCATTGAGCAACCAATATAGCCACCAAAACGAGTTGTCTTCACGACAATGTCGTCACTCCTCTACTGGAGCTGGGCTGA
CCTTATCAATGACAGTTGAGACGTCTTTGCTCACGTGTACAAAGGACCAGTGTCCTAGAGTCGCGGTCGTCACCATTTGA
CCACTGAACCGATCCAAAGTACCTGACATTAAATCTTACAAATCGAGTACGCATGACAAGAAACACTAACCTTGCCGCCG
CAAGGAGACAGTGGGATCACCGGAGCTTCCTTACTCAAGGAGGATTTGATTTCAAAACACAAACTCAAAGAAAAGGTACC
GCCATCCGGCCAAGGGTCACACATTCGAGGATTAACCATAACCTCAACTATTTGTGGTAGTTGAGGCACCATGATTCTCC
TCCTAGACTACCTGATGCATTTGTCCTCTTAGTCTGGTTTAATAAATTCGAGTGCCTTTTCAAAAAGGAAAAAGATACGA
TCAAATTTCTCGTTCCAAACGAAGAAGAAAATTACAGCCTACAAATTACTGCAATTCCATA--ATCCAGCGGCACTTGTT
GCGCCGATCCATCAGAAGATAAACGTTCCCATCTCCGCCCGAGAACATTCCCTATAAATACCCTGCGCACGTCGACACGC
ACTCGTAGTCGTAGTCGTGT-------------CTACAAGTGCAGCGCAACCACCATGACGCCTACCCGCTACCTCGCGG
CGCTGGCCGCCGCCGCCGCGCTACTCTTCATGCTCGGCGGCCTGCACGGCGTCGAAGCGGGGCCGGCGGACACCGACTGC
GCCGTCGCCCAGACGGCGTTCGGCGACTGCACCGGATACGTCGCCGGCGTGGAGGACAAGCTCTCGCCTCGCTGCTGCAG
GGGGCTCGCCGACATCAGGGACATGGCGCCGACCTTTGACCGGCGGCGCGCCCTCTGCGCGTGCATCCACAAGGAGATGC
TCGCCGCCGGCAAGGTGGTCACCCGCCGCGCCGCCACGCTCTCCGCCAGGTGCGGCGTCCGTATCTCCTTCCTCCCGACC
GCCCACGCCTTCGACTGCTATCGGTACGTACCTCGAGAAAACATGCGTGCTCCAAACTTTGTTCATGCCAGATGCTTCAA
TAATCGTGTTCGTAATTTGTTTTCCAAAAGGTGAATAGATAAAAATGCTTAGTCCCTTTGCAGGATTCCGCGAACTGATT
GAGAAATCGGCTTAATCATGGCGCCCAACAAAGAGCATCGAATAAGATGACTTGCACGACTTGTGGTGGGCATATTTACG
TTTCTCTTTCTTTTCTTTTTTCCTTC-TTTAATTTCACAAAGAGTAAACAGAAGAATAATCTAGCTTGTAATGATTTTTG
GAATAAAGATCATCGCAAGTAGGACTTGTTTACTCTGAAACAATATGTAGAAACTTA-----------------------
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-----------------------------GTCCGCGTGTAATCTGTATCTTATCCATATTATTAATATATTGAAGTTCAT
CGTAAAATTTTAGAAAAATACTCCATCCATTAGCAAATATAAGATGTTCTAACTTTTGTATGGATCGGATGTATATAAAT
ACGTTTTAGTGCATTTGTTCACTCAGTTTAGTCTGTATGTAGTAAATA--------------------------------
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------------------TTGAAATATCTAAAATATACTATTAA----ATTGTGATGGAGGAAGTAG---TAATTAGCTC
CCTCTCGGGCAACTTTTAGAAGAAAATCATTTGCGCCCTCTCATACACATTGGAAGAGGATCCGGCTTGCCTGCTCCCTT
CCCATGCTCCCATTTCATCTTACGGTTTTTCTTCTTTTTCCTTCCTAATCTAATCATCCCCTGATTTTAACGGGGTGGAC
CTAGGCCTTATTTTGTGGAGCACGGATGGGCGCACGCGCGGGACGCAGGCAAGTCTCGTCCATTGGAGGATACTGTTAAG
AAGTCTCTTTCCTTACTTGACTCGTGATTGACGGCAACTT--AACTTGGCAGATTTGCTTTCGTTGAATATGACTTCAAC
GTTAATGCAATCG------CTAGGTACAGCTCCGGAAGTCCAAA-GAGGGCTCAGTCCAAAACGCTACATACTGATTGCC
ATTAAATAAGCGCTCGTGATTATTCTCATTCTATGGACAGAAAATGTCACGTCATTTGCAGCTTTGTCCTTCGCTAATTA
TGTCTG-AAAATATTGCCAATGGTTCATTGTTGCATGCATGTGAGAAGCAGCGAACAGTTGTTGCGCAGGCCAGGCGATA
TG
>chr7B_843
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------------------------------------------AAATTGCCGAAATTCCATAATATCCAGTGCCACTCGTC
GCGCCGATCCAGCAGAAGATAAACGTTCCCATCTCCGCCCGAGAACATTCCCTATAAATACCGTGCGCACGTCGACACGC
ACTCGTAGTCGGTCTCGTAGTCGTAGTCGTATCCTACAAGTGCAGCGCAACCACCATGACGCCTACCCGCTACCTCGCAG
CGCTGGCCGCCGCCGCCTCGCTACTCTTCATGCTCGGCGGCCTGCGCGGCGTCAAAGCGGGGCCGGCAGACAACGACTGC
GCCGTCGCACAGACGGCGTTCGGCGACTGCACCGGGTACATCGCCGGCGTGGAGGACAAGCTCTCGCCGCGCTGCTGCAG
GGGGCTCGCCGACATCAGGGACATGGCGCCGACCTTTGACCGGCGGCGCGCCCTCTGCGCGTGCATCCACAAGGAGATGG
TCGCCGCCGGTAAGGTGCTCACTCGCCGCGCCGCCACGCTCCCTGCCAGGTGCGGCGTCCGTATCTCCTTCCTCCCGACC
ACCCACGACTTCGACTGCTATCGGTACGTACCTCGAGAAAACATGCGTGCTCCAAACTTTGTTCATGCCAGATGCTTCAA
TAATCGTGTCCATAATTTGTTTTCCATAAAGTGAACAGATAAAAATGCTTAGTCCCTTTTCAGGATTCCACGAGCTGATT
GAGAAATCGGCTTAATTATGGCGCCTAACAAAGAGCATCGAATAAGATGACTTGCAAGACTTGTGGTGGGCATATTTGTG
TTTCTTTTTCTTTTCTTTTTTCCTTTTTTTAATTTCACAAAGAGTAAACAGAAGAATAATCTAGCTTGTAATGATTTTTG
GAATAAAGATCATCGCAAGTAGGACTTGTTTACTCGGAAACAATATTTAGAAACTTAAGGCCTGTTCGGTAATCAGCCGC
TCCGGGAATCTGCGGAGCGGGAAAACCGCAACTCCTTCGATTTGTGCAGCAGCTCCACCAACTCCGCTCCCGAAGTTGGT
GGAGCGGAGGGGTACCGAACAGGGCCTTAGTCCGCGTGTAATCTGTATCTTATCCATATTATTAATATATTAAAGTTCAT
CGTAATTTTTTTGAAAAATACTCCATCCGTTCACAAATATAAGATGTTCTAACTTTTGTATGGGTCAGATGTATATAAAC
ACGTTTTTGTGTGTTTGTTCAATCAGTTTAGTTTGTATGTAGTAAATACTAGAAGAACACCCGTGCGTTGCAACGGGGCC
ACATTAACTTTAAGAGTTCAATATTACGACATTGGCGACTTTTTTTACCATCAAATCTTCACACACACACAGAACCACAC
TCTCCCTCCCTCTTCCTCACTCTCTATCCCCGTCTCCCTCTCGCTCTAACACACACACATATCCATCTTATTGGGTACGG
GACCATAATCCATCTATTTCACACATACACGCTAGTACATAACAATATGAATCATGTAAATCGACCAGCCACAACTCCAA
GAATACGCGGACGAGGTGGTTTGGGTCGGCGTCGGCGCCGTCCAACGCGGGCCACGGGCCCGCTTCCAAGTGCACGTGCA
ATGCACGACTTCACAAATATTATAATCAGATATGAGAAATCACATGCATAGAAAAGACATTCTGATAGCAATCCAAATAC
CATACTCAATTGAATACCTAACCTGGACAATACTCTTATTTCTATGCGCCAGAAAAAAATGGAATAGCAAAGCTAAGTAT
GCCTACATACGCTCAGATTATATATAAGAATCTTGGGTGAACAATTGCAACAAAGCACTAAGCAGCGATAAATTTAAATA
AAAAATCCATTAACTATGCAGACAGCAGGCTTGTTACAACATAGAGAGATAGAAAAATGTCACCTCCAGTAATGTAGCGC
AAAGGAGTGGAACGAAGCATGAATGAGCGGTTGCCTGTTCTTCTCCATGTACATGGATCAGCAGTAGAGGCCAAGTATAT
AAGTACTTGACCGAACTCCACTCTTCGTGTACGGAGAGCCATGTCACATTCTTGCCGCTGCAGCATGGGAGGACGGCTGG
TTCACGTGACCCTCCAGCTGGGGGATCCATGGTGGCTGACCGTCGAGCTCGAGGCAGAGAAGTTGAGGGCAGTAGTGGCG
AGATCCATGCCAGCCAACCGGGCGAAGAGGAGGTCGTCGGGGAGGGACACATCGGCAAGATCCGGTCACCACGCGACCTG
AAGAGCAACAGTGATCTCCACAAGCTGTAGGCCGACGGCGTGCTCCATCCCCTGCGATGGGGTGACCATGGCGGTGGCCA
CAGCTCCTCATGCTCGCCTCGATCTCGGCGACACACCCTGAGTGTAGGAGGCAGCAACGACCTCGACGAAATCATGACCT
CCATCCCGAAACGCAATCATGTCGCTCTAAATAAATGGATTCAATCATGTGACTCTAATTACTTCGGATTGTTATGTGCG
CACTAAGCGGGGTGCAGTTAGGAAAGAAAATGTTTTCTAATTAAAGTGATTGAGTGATTTAAGGTAAGGTTAATTAATTT
AGATTTGATTTTTAGTGATTGTTAGTAAAGTATGATGCGTCTTTAAAATCTTTTATTTGTTTCCTTAAAATCTATTATTT
GTTTCCTAAAAAAATTTGCAATAATGGAAGGTATCGGTTGATTTGGATAAGTTAGTAAATTTAGATCCGTGATTGCGTGC
ACGTTTGGAAAGTGCTGATTTGCAAGGAAAGAGCTGAGGGGTAAATAAACCGATGAATAAGAAACCAACATCGAAAAAAA
TCTACGACGGTTAACCTACGAAAAAAAACCGGACGAAAATGATGGGACGAAAAAAAACCTGGAAGCGAGACTACCAACTG
CTCCATTAGGAGTAGAGATTGAAATATCTAAAATATACTATTAT----TTTGTGACGGAGGAAGTAT---TAATTAGCTC
CCTCTCGAGCAACTTTTAGAAGAAAAT-----------------------------------------------------
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------------------------------------------------------------CATTGGAGGATACTGTTAAG
AAGTCTCTTTCCCTACTTGATTCGTGATTGACGGCAACTTTTAACTTGGCAGATTTGCTTTCGTTGAATATGACTTCAAC
GTTAATGCAATCGCTAGGTCTAGGTACAGCTCCGGAAGTCCAAAAGAGGGCTCAGTCCAAAACGCTACATATTGATTGCC
ATTAAATAAGCGCTCGTGATTATTCTCATTCTATGGACAGAAAATGTCACGTCATTTGCAGCTTTGTCCTTCGCTAATTA
TATCTGAAAAATATTGCCAATGTTTCATTGTTGCATGCATGTGAGAAGCAGCGAACAGTTGGTGCACAGCCCA-------
--
>chr7A_1044
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------------------CGCTATTCTTCATGCTCGGCGGCCTGCACGGCGCGGAGGCGGGGACGGCGGACAACGACTGC
GCCGTCGCCCAGACGGCGTTCGGCGACTGCACCGGCTACGTCGCCGGCGTGGAGGACAAGCTCTCGCCGCGCTGCTGCAG
GGGGCTCGCCGACATCAAGGACATGGCGCCGACCTTTGACCGGCGGCGCGCCCTCTGCGCGTGCATCCACAAGGAGATGG
TCGCCGCCGGCAAGGTGCTCACCCGCCGCGCCGCCACGCTCCCCGCCAGGTGCAGCGTCCGCATCTCCTTCCTCCCGACC
GCCCACGACTTCGACTGCTATCGGTACGTACCTCGAGAAAACATGCGTGCTCCAAACTTTGTTCGTGCCAGATGCTTCAA
TAGCCTTGTTCGTAATTTGTTTTCCAAAAGGTGAATAGATAAAAATGCTTAGTCCCTTTTCAGGATTCCGAGAGCTGATT
GAGAAGTCGGCTTAATCATGGCGCCCAACAAAGAGCATCGAATAAGATGACTTGCAAGACTTGTGGTGGGCATATTTACG
TTTCTCTTTCTTTTCTTTTTTCCTTC-TTCAATTTCACAAAGAGTAAACAGAAGAATAATCTAGCTAGTAATGATTTTTG
GAATAAAGATCATTGCAAGCAGGAGCTGTTTACTTTGAAACAATATTTAGAAACTTAAGTCCACGTGTAATTTGTATCTT
ATCCATATTATTAATATATTAAAC--------------------------------------------------------
------------------------------------TGTAATCTGTATCTTATCCATATTATTAATATATTAAAGTTCAT
CGTAATTTTTTTGAAAAATACTCCATCCATTCACAAATATAAGATGTTCTAACTTTTCTATGGATCGGATGTATGTAAAC
ACGTTTTAGGTTGTTTGTTCACTCAGTTTGGTCTGTATGTAGTAAATA--------------------------------
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------------------TTGAAATATCTAAAATATACTAGTATTATATTTGTGACGGAGGAAGTACTAGTAATTAGCTC
CCTCTCGGGCAATTTTTAGAGGAAAATCATTTGCCTTCTCTCAAACA---------------------------------
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------------------------------------------------------------CATTGGAGGATACTGTTAAG
AAGTCTCTTTCCCTACTTGACTCGTGATTGACGGCAACTT--AGCTTGGCAGATTTGCTTTCGTTGAATATGACTTCAAC
GTTAATGCAATCG------CTAGGTACAGCTCCGGAAGTCCAAAAGAGGGCTCAGTCCAAAACGCTACATATTGATTGCC
ATTAAATAAACGCTCGTGATTATTCTCATTCTATGGACAGAAAATGTCACGTCATTTGCAGCTTTGTCCTTCGCTAATTA
TGTCTGAAAA-TATTGCCGGTGTTTCATTGCTGCATGCATGTCAGAAGCGGAGAACAGATGGTGCACAGTCCAGGCGATA
TG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S-S-----------------S-S----S--S
-----------S--------------------------------------------------S-----------------
-----------SSS----SS----------------------------------------------------------S-
-----------------S------------------------------------------------------S-------
-----------------------------------S--------------------------------S-----------
-------------------------------------------------------------------------------S
-----------------S-----------------------S--------------------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------------S-------------S------
--------------------------------------------------------S-----------------------
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----------------------------------------------S---------------------------------
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-----------------------------------------------------------------------S--------
-----SS----S-------------------SS----------------------------------------------S
-----------SS-------------------------------------------------------------------
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-------------------------------------------S----S------S----------S-------------
----------------------------------SSS------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
------------S-------------------------------------------------------------------
-----------------------------------------------------------------------S--------
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----------------------S--------------------------------------S---S---S----------
--
>forward_137
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-------------------------------------AAATGAGTCATGGGGCAGGG-----------------------
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--
>reverse_3836
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---------------------------------------------------------------------------CCCTT
CCCATGCTCCCATTT-----------------------------------------------------------------
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--
