>input_sequence_78037
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--------------------------------------------------------------ATGGATTGCCCTGATGTG
CCGTCACTGGGCGCGGTGGCCGCCTGCCACAAGGCGTGTGGCACGAAACTCATGTATGACCTTTGCATCCGCATAATGCG
CGAAGGCGATGTCAACATGTCCCCGTCGCACACGGAGGGGGCCACCGCATACGCGATCCTCGCAGCGCACTCCGCTGCGA
TTTCCTTCGACAACACGACGATCGCCATGAGCGACCATCTCAGCCAGAACTCCTCGCTCTCGGGCGAGCAGAGGGACGCC
TACGAGGGGTGCATGGACGACTACGCACCGGCGGACAGCTCCATCGACACCATTGAAGAAGAGACCCTCCCCAGCTGCCA
CTTCGCGTTCCTCGCCGACGAGTACACGCGTGTGATAACTAATGTGGAGAAATGTAGGGACCGGCTGTTGGCGCCGACTC
TGGTGAAGACGCCGCTGTACCCCGTGGTGTTGGCCGACCTGAACAAAGCAGTGCTAGCGAACATGCTTGGTAAACTTTTA
GGCGTATGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr7B_1_TraesCS7B01G388900
CTAATTAACTATCCATCTAATTATCTA---CAATTATTTTTCTATCTGTAGACCTAATTAACTGTTTGCCAAATTAATT-
-TTATCCATCTAATTGGAAAATCCCTACTTTCAAATATTTGCATGCCTAATTAATGAATTATATTATTAATGGCTTGGTT
TTCAAATTGATTTGGCACAAAAATATCCACTAGTTATATGGTCCTACTTAATTGTGCATGTAATTAACTTTTGACTAATT
AGTAGCATTAATGGCTTGATTTCCGAATTAATTGGGTGTTCGGTTTTCAAATTAAGTCAATTAATTGGATCTACTTCCTC
CGTCGCGGTTTAAAAGGCGCACTTGGAAATTCTCTGGGACCTAAGTGATTATCTATTGGTTGTGAGATGGGCTAAATAAT
AGCATTCACACTACGCATGCATATACGAATAGTATATGGGAGTACTACTTAGCTACTAGAAATAAATGCAATGCGCCCTG
AACCTTGTCTATTGTGGAAACGCACCAAATTTAACTGTGCCTTCTAAACTGTGACGGAGGTAGTACTCCCTCCGTCTAGG
TGAGTAAGTCATCTTAGGTTGTGCACCGTGACCAAGGAGGAGGAGAAAATGAGAGAACTTAATGTTCATTTGCTAATTAA
TAGCATTGCATGCAATGAACTAACACTGCATGTCGTGTTTGATAGTCTCAAGTCATTAAAAGCATGCACACCCCACATCT
CTTATTGGTTGATATGTCAAGAAACAAGAAACGAGGTAGAATTTAATGCACCGCGCCTAAGTGTTTTGGGATTAATTGAT
TTTCGTAAGATGACTTACACACCTAGACGGAGGGAGTATAAAATCTTTTAGGAAGATTTTAAATGCACATCAT-------
-TGCAATGTTGTGCTTGCTAGCTCGGACAACAAAGCATATC--TCCCTACGAAGAGAGTTGT-GTGCTCTATGGCTATGG
CGAAGATCATTCTCCTCCTCCTCGTCCTAGTACCCATTCGCAT------GGGAGCCGCCCTGATGGATTGCCCTGATGTG
CCGTCACTGGGCGCGGTGGCCGCCTGCCACAAGGCGTGTGGCACGAAACTCATGTATGACCTTTGCATCCGCATAATGCG
CGAAGGCGATGTCAACATGTCCCCGTCGCACACGGAGGGGGCCACCGCATACGCGATCCTCGCAGCGCACTCCGCTGCGA
TTTCCTTCGACAACACGACGATCGCCATGAGCGACCATCTCAGCCAGAACTCCTCGCTCTCGGGCGAGCAGAGGGACGCC
TACGAGGGGTGCATGGACGACTACGCACCGGCGGACAGCTCCATCGACACCATTGAAGAAGAGACCCTCCCCAGCTGCCA
CTTCGCGTTCCTCGCCGACGAGTACACGCGTGTGATAACTAATGTGGAGAAATGTAGGGACCGGCTGTTGGCGCCGACTC
TGGTGAAGACGCCGCTGTACCCCGTGGTGTTGGCCGACCTGAACAAAGCAGTGCTAGCGAACATGCTTGGTAAACTTTTA
GGCGTATGAGTGTGTGCTAGATCAAGATGCGGTCCGTACACCAAAGACCAAACAATAAATATACGCATTGCCGCATTGGG
TACACCGCGAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATAGTTTTACATGCACGATGTATTGTCCGGGGTGGATGTAGGATTTGGTGCCATGCCAGG
TAAGGCTAATCTGTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AACTATTAAGCTTCTTTGAATTTGAGGCTCCTCATGTCTCATAGTCTTAGAAGTCGGTTC
TGGGCTCAATTATAAGAG-TTTGCTTCGCTGGTTAACTGTGTCTGAGACTACAACAGTGTCACATGGCAACAAAGAACAC
ATGTGGTTGCAATGCAAACCAACCCACACACCCACCACCGAAGATTTGCCTTAGGAAAAAAAATTGAGGGGTATTTGCCA
TATGAAATGGGAGCTCCTACTGGACACTCGTTGCGTCCAACAGGGTGC--------------CGACGCAACTTTCGCACA
GGCACGTCGCTGCGGCGCGCCGATTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAGGTGATAATTTGC-----GAAA
A-AT-ATGAGGGTGTGATGGCTTGGAATTGAACACAGCACTGCCGACTTGCACTCGCACCCTACTAGCCACTAGGATGGA
AGCGCTCAGCTGACCAAACTACAGCGGAAACCTACAAGAACTAAAGAAAGTATCAGACTGTTTGAAAAACATTCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACGTGAATATTTTATCAAACGCGAACATTATTAGTTC-TTTT-ACAAATTTTG-GA
ATACTCAAACATTTTTCACCACACAAACCAATTTTGGAGATGCAAACATATTTTTTAGAACGGAAACTTTTTTTAAACTA
CCCAAAAAACTGAACAAGAACAATTTTTC-------------AAATTTGGAAAAACAAACAACTTTTGAATTTCCCAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAATCACAAACATTTTCTAAATCTTGAGAACAAATTTTGAAACAGAAC---AAT
TTGGAAGCATGGACAATTTTTTAA
>chr7A_1
CTAATTAACTGTCAATCTAGTTATCTAGTACAATTATTTTTCTATCTGTAGACCTAATTAACTGTTTGCCAAATTAATTA
ATTATCTATCTAATTGAAAAATCCCTACTATTAATTATCTGCATGCCTAATTAATTAATTGTATTATTAATGACTTGGTT
TTCAAATTGATTTGGTGCAAAAATATTCATTATTTATACGGTCCTACTTAATTGTGCATGTAATTAACTTCTGACTAATT
AGTGGCATTAAT---------TCCGAATTTATTAGGTTCTTGGTTTCCAAATTTAAAAAATTAATTCGATC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TATAAGATCCTTTTGAAAGATTTTAAATGCACATCCTACAAATA
GTGCAATGTTGTGCTTGCTAGCTCGGACAACAAAGCATATCTCTCCCTACGAAGAGAGGTGT-GTGCTCTATGGCTATGG
CGAAGATCATTCTCCTCTTGCTCGTCCTGGTACCCATTCGCATTCGCATGGCAGCCGCCCTGATAGATTGCCCCGACGTG
CCGTCACTAGGCGCGGGGGCCGCCTGCCAGAAGGCGTGTGGCACGAAGCTCATGTATGACCTTTGCATCCGCATGATGCG
CGAAGGCGATGTCGACATGTCCCCGTCGCACACGGAGAGAGCCACCGCATACGCGATCCTCGCAGCGCACTCCACTGCGA
TTTCCTTCGACAACACGACGATTGCCATGAGCGACCAGCTCAGCCAGAACTCCTCGCTCTCCAGCAAGCAGAGGGTTGCC
TACGAAGGGTGCATGGACGACTACGCACCGGCGGACAGCTCCATCGACACCATCGAAGAAGAGACGCTCCCCAGCTGCCA
CTTCACGTTCCTCGCCGCCGAGTACACGCGTGTGATAACTAATGTAGAGAAGTGTAGGGACCGGCTGTTGTCGCCGACTC
TGGTGAAGTCGCCGCTGTACCCCATGGTGTTGGCCGACCTGAACAAAGCAGTGGTAGCAAATATGCTTGGTAAACTGTTA
GGCACATGAGTGTGTGCTAGATCAAGATGCAGTCCGTACACAAAAGAGCAAATAATAAGTGTACGCATTGCCGCATTGGG
TACACCGCAAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATAGTTTTACATGCATCATGTATTGTCCGGGGTGGATCTAGGATTTGG-----TGCCAGG
TTAGGCTAATCTGTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr7A_869
--------------------------------------------------------------------------------
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-TGCAATGTTGTGCTTGCTAGCTCGGACAACAAGC---ATATCACCCCACAAAGAGACGCGGGGTGCTCTATGGCTATGG
CCAAGATCATTCCCTTCCTCCTCGTTCTAGTACCCATTCGCAT------GGCAGCCGCTCGGACGGATTGCCCCAACGTC
CCGTTACTGGGCGCAGTGGCCGCCTGCCAGAAGGCTTGCGGCACGAAGCTCATATACGACCTCTGCATCCGCATGATGCG
CCAATGCGGTGCTGACGTGTCCCCGTCGCACAAGGAGAGGGCCACCGCATACGCGATCCTTGCGGCGCACTCCGCTGCGA
ATTCCTTCGACGACACAAAGCTCGCCGCGAGCAACCAGCTCAGCCACAACTCCTCGCTCTCCGGCAAGCAGAGAGACGCC
TATGAGGGGTGCATGAACGACTACGCACCGGCCGACAGCTCCATCGACCGCATCGCCGACGAGACGCTCCCTAGCTGCCG
CTTCACGGGCCTCGCCGACGAGTACACGCGTGTGATAAATAGTGTGGAGAAGTGTAGGGACCGGCTGTTGACGCCGACTC
TGGTGAAAACGCCGCTGTACCCCATGGTGGTGGCCGACCGGAACAAAGCAGTGCTAGCGAACATGCTTGGTAAACTGTTA
GGCATATGAGTGTGTGATGGATCAAGAGGCAGTCCGGACACCAGAGAGCAAATAATAAATACCAA-------GCATTGAG
TACACCGCTACCAGGGCCGGCCCTAGCATCTCGGAGGCCCTAGTGCGAACATGGTACAATGGGCCCTACAGTCGCACCTT
ACATCTCCATGTTCGCTGCTGCACGTCGCAGCCGCAAGTCCGTTCAAACTATCCATATGACACAACAGTAATTTTAAACA
AATATTTTATGATCTATCTAGAAGTAGCAATTTGAAATTTGAACAAAAACAGAAACACCTTCCATACAAGAACAGTAGAG
AAATGTCACAAGATAAACCCCCAGCAACATATAATCATCATGTGGTAATGTGGTGATGGTCAATCATCTTTAACATGAAA
CAATTACTTGTGTGAGAGTTCCATGCAAGAGAATCGTCACATAATTCGCAATAAACAAGAAAAGACGGACAATCCATAGG
ATGAACAATTTACCTATGGACCGGTGCTAGTGTCAATGCCTTAGCGGCAAGCCGAATGTGGTGCATCTTCAGCTCGTCGC
CGGTGCCAAGGAGGTCACCACCAGGGCCTTGTCGCCTTGGGTACTTTCAGAAGAACCTATATACTACTAGTACAGAACTC
ACTGGCAAAGAAATCAAGGAGATGATACAACTGACAATCCATTCATGAGCGTCGCTTGGGTGCCGGCCCCCTAGGCACTT
GGTGCAATTAATTGGGAGAGGAAGAAGATTGAACGGGAAGAAGAACGAACCGGCGGCGCTGTCTCACACAAAACGAAGCA
ATTAGGATATATTGGCTGGCTCCACCGTCAATGGGCTGCGAGTGCTACCTTCCTCAGTTTATTTTTCCCTTCAAATGTGT
CAATACATGTGCACAGAGAGTGTATGGTGGGCCCTTGGACATGCTGGGCCCTAGGCGGCTGCACTCCTCGCCATGGCTTA
GGGCCGGCTCTGACCGCTATATAGTGTTACATGCATGATCTATTGTCAGGGGTGGATTTAAGATTTGG-----TGCCAGG
TTAGGCTAATCTGTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AGTTATTAAGCTTCTTTTAAATCGAGGCTCCTGATATGTCATGG--TTAGAAGTCGGTTG
TTGGTTCAATTATAACGGTTTTGCTTCGCTGGTTAACTGTGTCTGAGACTACAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr7D_869
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-TGCAATGTTGTGCTTGCTAGCTCGGACAACAAGC---ATATCTCCCCACAAAGAGACGCGG-GTGCTCTATGGCTATGG
AGAAGATCATTCTCCTCCTCGCCGTCCTAGTACCCATTCGCAT------GGCAGCTGCTCGGACGGATTGCCCCAACGTG
TCGTTACTGGGCGCGGTGGCCGCCTGCCAGAAGGCGTGCGGCACGAAGCTCATGTACAACCTCTGCATCCGCATGATGCG
CCAAGGCCATGCCGACATGTCCCCGTCGCACAAGGAGAGGGCCACCGCATACGCGATCCTGGCGGCGCACTCCGCTGCGA
ATTCCTTCGACGACACGAAACTCGCCGCGAGCAACCAGCTTAGCCATAACTCCTCGCTCTCCGGCCAGCAGAGGGACGCC
TACGAGGGGTGCATGAACGACTACGCACCAGCGGACAGCTCCATCGACCGCATCGCCGACGAGACGCTCCCCAGCTGCCG
CTTCACGGGCCTCGCCGACGAGTACACGCGTGTGATAACTAGTGTGGAGAAGTGTAGGGACCGGTTGTTGACGCCGACTC
TGGTGAAAACGCCGCTGTACCCCATGGTGGTGGCCGACCGGAACAAAGCAGTGCTAGCGAACATGCTTGGTAAACTGTTA
GGCATATGAGTGTGTGTTGGATTGAGAGGCAGTCC---------AGAGCAAACAATAAATACCG--------GCATTGAG
TACACCGCTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATAGTGTTACGTGCATGATGTATTGTCAGGGGTGGATTTAGGATTTGG-----TGCCAGG
TTAGGCCAATCTGTTACTCCCTCATTTTCGGTTTATAGGGCTTATATTAAAATTTTAGTTCTCCCATTTTATAAGTCTTA
ATTTAGTTGTTCCCCATCAAATGTTCAGATTTCAAGGTGCAATAAATCATTGCATGCAAGTATTAAAAAAAAATTGACCA
ATGCATGTATTTTATGCCTGCATGCATTGCAATTAATGCATTAGTAAACACAATTTTTGAAGAAAACAAACGCATCAATT
GAGTGATTTTGCAAACTACAAAAATTGTTTCATCACTCACCATCTATTTTGGTTGGTGAGATTTTTGAATTGAGCCCTAT
AAACCGAAAAGGATGTAGTAAGTTATTAAGCTTCTTTAAATTCGAGGCTCCTGATATGTCATGG--TTAGAAGTCGGTTG
TTGGCTCGATTATAACGG-TTTGCTTCGCTGGTTAACTGTGTCTGAGACTACAA--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>chr1A_1892
--------------------------------------------------------------------------------
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-------TGGGAGCTCCTACTTGACGCTCGTTGCGTCCAACAGGGCGCCGACGCACAGGGGGCAACGCGACTTTTGCACA
AGCATGTCGCCGCAGTGCGCCGATTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAGGTGATAATTTGC-AAAAGAAA
A-AT-AGCAGGGCGTGATAGCTGGGAATCGAACACAGCACTGCAGACTTGCACTAGCACCCTACTAGCCACAAGGATGGA
AGCGCTCAGTTGACCAAACTACACCGGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACGTGAATGTTTTATCAAACGCGAAAATTATTAGTTTTTTTT-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAATGAATTTTGGAGACGTGAACATACTTTTTAGAACGGAAACATTTTTTAAACTA
CCCAAAAACCTGAACAGGAACAATTTTTCAAATTTGGAAACAAAATTTGGAAACACAAACAACTTTCGAATTTCCCAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAAGCACAAGCATTTCCTGAATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCACAAACATTTTTT---
>chr6D_1893
--------------------------------------------------------------------------------
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--------GGGAGCTCCTACTGGACGCTCGTTGCGTCCAACAGGGCGCCGACGCACAGGGGGCGACGCGAC-TTCGCACA
CGCACGTCGCTGCGGTGCGCCGACTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAG-TGATAATTTGCAAA---AAA
A-AT-AGCAGGGTGTGATGGCTGGGAATCGAACACAATACTTTCGACTTGCACTCGCACCCTACTAGACACTAGGATGGA
AGCGCTCAGTTGACCAAACCACAGCGGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACGTGAATGTTTTATCAAACGCGAACATTATTAGTTTTTTTT-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACGAATTTTGGAGACGCAAACATATTTTTTAGAACGGAAACATTTTTTAAACTA
CCCAAAAAACTGAACAGGAACAATTTTACAAATTTTGAAACAAAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
AGTTTTGGAATTTGTGACATTTCTTTAAAGCACAAACATTTTCCGAATCTTGAGAACAAATTTTGAAACAGAGAACAAAT
TTGGAAGCACGGACAATTTTTT--
>chr4D_1893
--------------------------------------------------------------------------------
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--------GGGAGCTCCTACTGGACGCTCGTTGCGTCCAACAGGGCGCCGACGCACAGGGGGCGACGCGAC-TTCGCACA
CGCACGTCGCTGCGGTGCGCCGATTGGGCCGGCCCATTGGAGTGTGCTGCAAATACAAG-TGATAATTTGC-----AAAA
A-AT-AGCAGGGTGTGATGGCTGGGAATCAAACACAGCCCTTTCGACTTGCACTCGCACCCTACTAGCCACTAGGATGGA
AGCGCTCAGTCGACCAAACTACAGCGGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTCGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACGTGAATGTTTTATCAGACGCGAACATTATTAGTTTTTTTT-ACAAATTTTGAAA
AAACTCAAACATTTTTAAACACACAAACGAATTTTGGAGACGCGAACATATTTTTTAGAATGGAAACATTTTTTAAACTA
CCCAAAAAACTGAACAGGAACAATTTTACAAATTTTGAAACAAAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAAGCACAAACATTTTCTGAATCTTGAGAACAAATTTTGAAACAGAGAACAAAT
TTGGACGCACGGACAATTTTTTAA
>chr4D_1924
--------------------------------------------------------------------------------
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------------------------------------------------------ACAGGGGGCGACGCGACTTTTGCACA
GGCACGTCGCCGCAGTGCGCCGATTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAGGTGATAATTTGC-AA---AAA
A-AAAAGCAGGGCCTGATGGCTGGGAATCGAAGACAGCACTTCAGGCTTGCACTCACACCCTACTAGCCACAAGGATGGA
AGCGCTCGGTTGACCAAACTACAGCGGACACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACATGAATGTTTTATCAAACGCGAACATTATTATTTTTC--T-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACGAATTTTGGAGACGCGAACATATTTTTTAGAATGGAAACA-TTTTTAAACTA
CCCAAAAACTTGAACAGGAACAATTTTTC-------------AAATTTGGAAACACAAACAACTTTTGAACTTCCCAAAC
ATTTTTGGAGTTTGTGACATTTCTTTAAAGCACAAACATTTTCTGAATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCGCGGACAATTTTTTAA
>chr6A_1924
--------------------------------------------------------------------------------
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------------------------------------------------------ACAGGGGGCAACGCGACTTTTGCACA
AGCACGTCGCCGCAGTGCGCCGATTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAGGTGATAATTTGC-AA---AAA
AGAT-AGCAGGGCGTGATAGCTGGGAATCGAACAAAGCACTGCAGACTTGCACTAGCACCCTACTAGCCACAAGGATGGA
AGCGCTCAGTTGACCAAACTACAGCGCAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAACGTGAATGTTTTATCAAACGCGAACATTATTAGTTTTTTTT-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACGAATTTTGGAGACGTGAACATACTTTTTAGAACGGAAACATTTTTTAAACTA
CCCAAAAACCTGAACAAGAACAATTTTTCAAATTTGGAAACAAAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAAGCACAAACATTTTCTGAATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCACACGCAATTTTTTAA
>chr4A_1924
--------------------------------------------------------------------------------
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------------------------------------------------------ACAGGGGGCAACGCGACTTTTGCACA
AGCACGTCGCCGCAGTGCGCCGATTGGGCCGGCCCATTGGAGTGCGC-GCAAATACAAGGTGATAATTTGC-AA---AAA
A-AT-AGCAGGGCGTGATAGCTGGGAATCGAACACAACACTGTAGACTTGCACTAGCACCTTACTAGCCACAAGGATGGA
AGCGCCCAGTTCACCAAACTACAGACGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAA-TAGCAAAAACAAAAAGTAAATGTTTTATCAAACGCGAACATTATTAGTTTTTTTT-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACGAATTTTGGAGACGTGAACATACTTTTTAGAAGGGAAACATTTTTTAAACTA
CCCAAAAACCTGAATAGGAACAATTTTTC-------------AAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
-TTTTTGGAATTTGTGACATTTCTTCAAAGCACAAACATTTTCTGAATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCACAAACAATTTTTTAA
>chr3A_1935
--------------------------------------------------------------------------------
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----------------------------------------------------------------ACGCGACTTTTGCACA
AGCACGTCGCCGCAGTGCGCCGATTGGGCCGGCCCATTGGAGTGCGCTGCAAATACAAGGTGATAATTTGC-AAAA--AA
A-AT-AGTAGGGCGTGATAGCTGGGAATCGAACACAACATTGCAGACTTACACTAGCACCCTACTAGCCACAAGGATGGA
AGCGCTCAGTTGACCAAACTACAGCGGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAAAATAGCAAAAACAAAACGTGAATGTTTTATCAAACGCGAACATTATTAGTTTTTTTT-ACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACAAATTTTGGAGACGTGAACATACTTTTTAGAATGGAAACATTTTTTAAACTA
CCCAAAAACCTGAACAGGAACAATTTTTC-------------AAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
ATTTTTAGAATTTGTGACATTTCTTTAAAGCACAAACATTTTCTGGATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCACAAACATTTTTT---
>chr5A_1991
--------------------------------------------------------------------------------
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----------------------------------------AGGGCGCTGCAAATACAAGGTGATAATTTGC-AAAAGAAA
A-AT-AGCAGGGCGTGATAGCTGGGAATCGAACACAGCACTGCAGACTTGCACTATCACCCTACTAGCCACAAGGATGGA
AGTGCTCAGTTGACCAAACTACAGCGGTAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTATG
ATTCTCCAAA-TAGCAAAAACAAAACATGAATGTTTTATCAAACGCGAACATTATTAGTTTTTTTTTACAAATTTTGAGA
AAACTCAAACATTTTTCAACACACAAACGAATTTTGGAGACGTGAACATACTTTTTAGAACGGAAACATTTTTTAAACTA
CCCAAAAACCTGAACAGGAACAATTTTTC-------------AAATTTGGAAACACAAACAACTTTTGAATTTCACAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAAGCACAAGCATTTTCTGAATCTTGAGAACCAATTTTGAAACGGAGAATAAAT
TTGGAAGCACAAACATTTTTT---
>chr7D_2006
--------------------------------------------------------------------------------
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-------------------------------------------------------CAAGGTGATAATTTGC-AAAA----
A-AT-AGCAGGGTGTGACGGCTGGGAATCGAACACAGCACTTTAGGCTTGCACTCGCACCCTACTAGCCACAAGGATGGA
AGCGCTCGGTTGACCA---TACAGCGGAAACCTACAAGAACTAAAGAAAGTATAAGACTGTTTGAAAAACATCCTTTACG
ATTTTCCAA--TAGCAAAAACAAAACGTGAATGTTTTATCAAACGCGAACATTATTAGTTTT-TTTTACAAATTTTGAGA
AAACTCAAACATTTTTCAACACAAAAACGAATTTTGGAGACGCGAACATATTTTTTAGAACGGAAACATTTTTTAAACTA
CCCAAAAACCTGAACAGGAACAATTTTTC-------------AAATTTGGAAACACAAACAACTTTTGAATTTCCCAAAC
ATTTTTGGAATTTGTGACATTTCTTTAAAGCACAAACATTTTCTGAATCTTGAGAACCAATTTTGAAACGGAGAACAAAT
TTGGAAGCGCGGACAATTTTTTAA
>SNPs
----------S--S-----S------------------------------------------------------------
------S---------S------------S-S--S---S----------------S----S-----------S-------
---------------SS---------S--S--S-----S-------------------------------S---------
---S--------SSSSSSSSS--------S---S---SS-S-----S------S-SSS--------S----SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---S---S-S-------------------S--------
----------------------------------------------------------S---------------------
---------------------------------------------------S---------------------S--S---
-----------------------------S-----------------S--------------------------S-----
-------------S-----------------------S------------------------------------------
-------------------------------------S-----------------------S---S--------------
-----------------------------------------------------S-----------S--------------
----S----------------------------------------------S------------------S---------
-----------------------S----------------------------------------------------S---
---S--------------------------S----------------S--------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---------------------S----------SSSSS-------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------SS--------------S----S---------S--S-S----S-SS-------------S
-S-------------SS-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS------------------S-------------------S----------------------S-----------
---------------S----------------------------------------------------------------
------SS--------------S-----S---------------------------------------------------
---------S-------------------------------------------S------------------S-------
--------------------------------S---------------------------S-------------------
-S----------------S---------S-----------S--------------------------S------------
-----------------------------------------------------S--------------------------
-----------------------------S--------------S---------------------------SS------
---------S--------------
>forward_722
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CATGCACACCCCACATCT
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GAGGGTGTGATGGCTTGGAA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
