>input_sequence_77966
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ATGCGAATCGG
AGACTGCAAGGGGACTCGACTTCCGCCGTCTGCTCCGCCACGCCCCAAAAGCCTCGCCGGCACGAGCGAACAGGCTCCGC
TGCTTGCCGTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGAGGCGTAGTAGCGGTACGTGCGGGCGCCG
AGCAAGAAGACGGCGAGTGCGCAGAGCATCACGACGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGAGGAACACGAGCGTGACGGCGGTGCCGGCGCATATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGCCTCCCGCGGGTGGCTCGCGTCGAACTGGTCGGCGCCGAAGGCCTGGACGCACGGCTTGTGCCCGCCCTGCGCCAGG
GCCACCAGGTAGAGGGAGGTGTAGAACGCGGCCATCTGCAGACCGGACGGCGGCGGGCAGGGCGTGCCGCCGTCGGTGTT
ACTGCATTTGTGATTGCCGGGGGAGAGCAATGTCGAGAGAGCCAGCATTCCTAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr1A_1_TraesCS1A01G269800
TAGCTCGTCGACTGAGATTTAGCAGTTCCGTTTAACCTATGCCTAGCTCGAGTATATACTGCTAATTCTAACCAACGGCA
GCTGCCGCTGCCTTCTTCTTGTACTTGAAGGTAACGGCGAAGAAGACGTACACCACAAGCTCGAGCGCGCTGAGCGCGGC
GATGAGCCAGTAGAAGTAGTCGAGGTGGCCGCGGTTGAGATTGTTGGAGAACCAGCTCGGCCCC---CTCTCCGACGTCC
ACTTGTCGATGCCCGACACGAGGCCGCTGCTGATGAAGCTGCCGATGCCGAAGATGCTGAGGTAGAGCGCCAGCCCGATG
CTGCGCAGCTTGTCGGGCACCTGGTCGTAGAAGAACTCCTGCAGGCCGACCATGGTGAACACGTCCGCCGCGCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGGACCGGCACCCTGGGCAGGTCCGCCAGGCCGGCGTCCGCCGCGA
TCCGGAGCCGGCGCGTCTCCACCAGCGCCGCCACCACCATGGACACGAGCGAGAGCACCATCCCGACGCCGATGCGCTGC
AGCATGGTGATCCCCGAGGAGACGCCCGTGCAGCGGCGCGCCAGCGGCACGATGGCGCGGTCGTAGATGGGCATGAAGAC
CACGATGGTGATGCTGATGAAGCTCTGCAGCGCCGCCGGTGGCACCTGGACCCGCTT--------GCCCACGTGCCGGTC
CAGGGTCGCCGCCTGCTTCGTGAAGAACGTGGACGACTGGGAGAACGCCACGGCGTAGATCAGGCACGTCGCCCAGATCG
GGAACAGCCGGAGGACGCCCTTGACTTCCTCGACGAGGTCCGCGTTTCTGATCACCACTCCCTGCTCCTCCTCGTCGACC
TGAGCACTG--CAAATTTTGGTGAAAGCATATCAATGTCCACGTCGGGTTCTTGCAT------------TCCATCGACCG
AACACGCTGTCAAACACTTCGA----ATTACCTGTATTCCGGCGCCTGTGTTGCGGGTCGACGGCCTTCATGCGAATCGG
AGACTGCAAGGGGACTCGACTTCCGCCGTCTGCTCCGCCACGCCCCAAAAGCCTCGCCGGCACGAGCGAACAGGCTCCGC
TGCTTGCCGTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGAGGCGTAGTAGCGGTACGTGCGGGCGCCG
AGCAAGAAGACGGCGAGTGCGCAGAGCATCACGACGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGAGGAACACGAGCGTGACGGCGGTGCCGGCGCATATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGCCTCCCGCGGGTGGCTCGCGTCGAACTGGTCGGCGCCGAAGGCCTGGACGCACGGCTTGTGCCCGCCCTGCGCCAGG
GCCACCAGGTAGAGGGAGGTGTAGAACGCGGCCATCTGCAGACCGGACGGCGGCGGGCAGGGCGTGCCGCCGTCGGTGTT
ACTGCATTTGTGATTGCCGGGGGAGAGCAATGTCGAGAGAGCCAGCATTCCTAAACCCTGCACGCAGTTTCAG-------
AG-TGAGAAATTTAGAAATGTGATGCATACGATCCTGTCTCGTGAATCAAACATCGGAAAAAGAAGAGCAGAGTGAAATT
GCGTCCTCCCAAAATTATACAGTACTCCTTCCGTTCATAAGTATACATCTTTTTATAAATTCCAATATAGACTACGGAGC
AAAATAAGTGAATCTATACTTTAAAATGCATTTATATACATTTGTATGTAGTCTCTATTGAAATCTCTGAAAGGTCTATA
TTTAGTAAGAGAGGGAGTATAAGATGTTTATAGACAACAAACCG------------------AAACAAGTGAACAAAAAC
ACAAAACCGTCTCTATATACTCCCACCGTCCCATAATATAAGACGGTTTTTGCCACTACACTAGCTAGTGGCAAAAAACA
TTTTACACTATGAGATGGAGAGACATCAAATTCAAGAATAGTTAAAACAATCCTATATTTGTGAATAAAGGGAGTACTAC
------------------TTATTATTATTCATGCCTCTTATCAAGCGAGGCCTG-GGCCGGTCAAGCACTGCACCTGCCG
CGTGTTTTTTTTCTTTGTAGTTTTCTTATCGGTATTCACTGTTTGCATCGATTACTTTGGGTCTTTTTATTTTTCTCTGT
TTTCTCGTTTTTACTTATTTTTAAAGTTTTCTTTGTTTTTTCTTCTGCTTTCATCTGGTTTGCCCTTTTAAAAAGATCAA
CACAGGTCTGCAATTTTTCATACACAATGTATATTTTTGATGAGAACATTTATTACT------CACATTTAACATTTTTT
AAGTTCATGATTAACATTTTTTTCAGAATGTATGTTTTGATATCTATTTTTACATACACATTATACATTTTTTATATATG
TCTACAATATTTTTTGCACGTTTAACGTTTTTAATACATAATTATAGTTAAAAAACATGTTTTGAACATTTTTTCAAAGA
TGTTTTAAAACATAACTTCAAATGGTATAAAATTGTAAACTATCAGATTTTTCACATCGTATCAA
>chr1D_33
--------------------------------TATCCTCTGCCTAGCACGAGTATATACCGCTAATTCTAACCAACGGTA
GCTGATGCTGCCTTCTTCTTGTACTTGAAGGTTACGGCGAAGAAGACGTACACCACAAGCTCGAGCGCGCTGAGCGCGGC
GATGAGCCAGTAGAAGTAGTCGAGGTGGCCGCGGTTGAGATTGTTGGAGAACCAGCTCTGCCCC---CTCTCCGAGCTCC
ACTTGTCGATGCCCGACACGAGGCCGCTGCTGATGAAGCTGCCGATGCCGAAGATGCTGAGGTAGAGCGCCAGCCCGATG
CTGCGCAGCTTGTCGGGCACCTGGTCGTAGAAGAACTCCTGCAGCCCCACCATGGTGAACACGTCCGCCGCGCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGGACCGGCACCCTGGGCAGGTCCGCCAGGCCGGCGTCCGCCGCGA
TCCGGAGCCGGCGTGTCTCCACGAGCGCCGCCACCACCATCGACACGAGCGAGAGCACCATCCCGACGCCGATGCGCTGC
AGCATGGTGATGCCCGAGGAGACGCCCGTGCAGCGGCGCGCCAGCGGCACGATGGCGCGGTCGTAGATGGGCATGAAGAG
CACGATGGTGATGCTGATGAAGCTCTGCAGCGCCGCCGGTGGCACCTGGACCCGCTT--------GCCGACGTGCCGGTC
GAGGGTCGCCGCCTGCTTCGTGAAGAACGTGGACGACTGGGAGAACGCCACGGCGTAGATCAGGCACGTCGCCCAGATCG
GGAACAGCCGGAGGACGCCCTTGACTTCCTCGATGAGGTCCGCGTTTCTGATCACCACCCCCTGCTCTTCCTCGTCGACC
TGAGCACTGTACAAGATTTGAACAAAGCAGAGCAGTGAG-ACATCGCGTTCTTCCTCTTGCTGCTTGTATCGGTCGATCG
AGCATCCTGCCAAACACTCTGTATTTATTACCTGTATTCCGGCGCCGATGTTGCCGGTCGATGAGCTTCATGCGAACCGG
AGGCTGCAAGGGGACTCGACTTCCGCCGCTTGCTCCGCCACACCGCGAAAGCCTCGCCGGCACGAGCGAACAGGCTCCGC
TGCTTGCCGTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGAGGCGTAGTAGCGGTAGGTGCGGGTGCCG
AGCAAGAAGACGGCGAGGGCGCAGAGCATCACGACGCACGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGAGGAACACGAGCGTGACGGCGGTGCCGGCGCATATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGCCTCCCGCGGGTGGCTCGCGTCGAACTGGTCGGCGCCGAAGGCCTGGACGCACGGCTTGTGCCCGCCCTGCGCCAGG
GCCACCAGGTAGAGGGAGGTGTAGAACGCGGCCATCTGCAGACCGGACGGCGGCGGGCAGGGCGTGCCGCCGTCGGTGTT
ACTGCATTTGTGATCCCCGGAGGAGAGCAATGTCGAGAGAGCCAGCATGCCTAAACCCTGCACGAAGTTTCAGCAGTGCC
AG-TGAGAAATTTAGAAATGTGATGCATACGATCCTGTCTCGTGAATCAAACATAGGAGAAACAAGAGCAGAATGAAATC
TCGTCCGTCCAAAATTATACAGTACTCCCTCCGTTCACAAA---------------------------------------
--------------------------------------------------------------------------------
-----------------TATAAGATGTTTTGAATATTTGAAATACAAACTACATACAAATTCAAACAAATGAACAAACAC
CTTAAAACGTCTCTATATAC------------------------------------------------------------
------------------------ATCAAATTCACAAAAAAGTTAGAC-ATCCTATATTTATGAACAAAGGGAGTACTAC
TACTACTACTACTAATTATTATTATTATTCATGCCTCTTATCAAGCGAGAGCTAAGGCCGGCCAAGTACTGTAGCTGTCA
CACATTTTTTTGGTAGTT-------TTATTGGTTTTCACTGTTTGCATCGATTTCTTAGGGTCTTTTTGTTTTCTCTTTT
TTTATCCTTTTCACTAATTT-----------TTTATTTTTTCTTCGATTTTCATCAGGTTTGTCCTTTAA-------CAA
CACAGGTCTGCA-TTTTACATACACATTTTATATTTTTCTTATACATCAAGAACATTTTTACACACGTTTCACATTTGTT
ATGTTCATGATTGACATTTTTGCTAAATA-TATGTTTTCATGGCTATTTCTTCATACACATTGTACATTT-TTGTATACA
TCTAAAAGATACTTTCGCATGTTTAATTATAAATTCATGATTTTTTAA-AAAATACATGTTTTGAACATTTTT-------
-----------------------------------------------------------------
>chr1B_57
--------------------------------------------------------TACTGCTAATTCTAACCAACGGTA
GCTGATGCTGCCTTCTTCTTGTACTTGAAAGTTACGGCGAAGAAGACGTACACCACAAGCTCGAGCGCGCTGAGCGCGGC
GATGAGCCAGTAGAAGTAGTCGAGGTGGCCGCGGTTGAGATTGTTGGAGAACCAGCTCTGCCCC---CTTTCCGACGTCC
ACTTGTCGATGCCCGACACGAGGCCGCTGCTGATGAAGCTGCCGATGCCGAAGATGCTGAGGTAGAGCGCCAGCCCGATG
CTGCGCAGCTTGTCGGGCACCTGGTCGTAGAAGAACTCTTGCAGGCCGACCATGGTGAAGACGTCCGCCGCGCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGGACCGGCACCTTGGGCAGGTCCGCCAGGCCGGCGTCCGCCGCGA
TCCGGAGCCGGCGCGTCTCCACGAGCGCCGCGACCACCATCGACACGAGCGAGAGCACCATCCCGACGCCGATGCGCTGC
AGCATGGTGATGCCCGAGGAGACGCCGGTGCAGCGGCGCGCCAGCGGCACGATGGCGCGGTCGTAGATGGGCATGAAGAG
CACGATGGTGATGCTGATGAAGCTCTGCAGCGCCGCCGGCGGCACCTGGACTCGCTT--------GCCGACGTGCCGGTC
GAGGGTCGCCGCCTGCTTCGTGAAGAACGTCGACGACTGGGAGAACGCCACGGCGTAGATCAGGCACGTCGCCCAGATCG
GGAACAGCCGGAGGACGCCCTTGACTTCCTCGATGAGGTCCGCGTTGCTGATCACCACCCCCTGCTCTTCCTCGTCGACC
TGAGCACTG--CAAATTTTGGCGAAAGCACATCAATGGCTACGTCGCGTTCCTGCAT------------CTCATCGACTG
AACACGCTGCCAAACACTCTGA----ATTACCTGTATTCCGGCACCGATGTTGCCGCACGATGAGCTTCATGCGAATCGG
AGGCTGCAAGGGGACTCAACTTCCGCCGCTTGGTCCGCCACGTGGCGAAAGCCTCGCCGGTACGAGCGAACAGGCTCCGC
TGCTTGCCGTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGAGACGTAGTAGCGGTACGTGCGGGTGCCG
AGCAAGAAGACGGCGAGGGCGCAGGCCATCACGACGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGAGGAACACGAGCGTGACGGCGGTGCCGGCGCATATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGCCTCCCGCGGGTGGCTCGCGTCGAACTGGTCGGCGCCGAAGGCCTGTACGCACGGCTTGTGCCCGCCCTGCGCGAGG
GCCACCAGGTAGAGGGAGGTGTAGAACGCGGCCATCTGCAGACCGGACGGCGGCGAGCAGGGCGTGCCGCCGTCGGTGTT
GCTGCATTTGTGATTGCCGGAGGAGAGCAATGTCGAGAGAGCCAGCATTCCTAAACCCTGCACGCAGTTTCAGTCGCGCC
AATTGAGAAATTTAGAAATGTAATGCATACGATCCTGTATCGTGAATCAAACATCGGAGAAAGAAGAGCAGAGTGAAATC
TCGTCCTCCAAAAATTATACAGTACTCCCCTCCGTTCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3D_92
--------------------------------------------------------------------------------
-----------CTTCTTCTTGTACACATAGGCTCGCGAGAAGAAGAAGAATGCGACGAGCTCGAGGACGCAGAGTCCGGC
GAGCAGCCAGTAGAAGTAGTCGAGGTGCGCGCGGTTGAGGTTGTTGGAGAACCAGCTGGCGCCG---CGCTTCGCCGTGG
CCCTGTCGATGACGGAGATGAGGAAGCTGCTGAGGAGGTGGCCCACCCCGAAGATGCTGAGGAAGAGCGCGAGGCCGAGG
CTGCGCACGGCGTCGGGCACCTGGTCGTAGAAGAACTCCTGGAGGCCGATCATGGCGAACACGTCGGAGACGCCGATGAG
GACGTACTGCGGCACCATCCACCAGAGCGTCATGGGCAGGTGCGCCTTGGGGGCGTCCACCAGGCCGGCGTCCCTGGCGA
CGCCGAGCCGCCTCATCTCCACGAGCGCCGAGAGCACGACGGCGACGAGGGAGAGGGAGAGGCCGGCGCCGACCCGCTGC
AGCATGGTGATGCCCGTGGGCCGCCCCGTGTAGCGGCGCGCGAGCGGCACGAAGAGGCGGTCGTACACCGGGATGAAGGC
CACTATGCTGACGCTGATGAAGGTCTGCAGCGCCGCCGGCGGCACCTTGAA------CTTGGG--GCCGATCCGGCGGTC
CAGCGTGGCCGCCTGCTTGGTGAAGAAGGTGGAGGTCTGGGAGAAGATGATGGCGTAGATTATGCAGGACGCCCAGATGG
GCAGCAGGCGGAAGACGCTCCTCACCTCCTCCACCAGGTCCTCGT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr1A_137
--------------------------------------------------------------------------------
--------------------------------------------------------AAGCTCCAGCGCGGTGAGCGCAGC
GATGAGCAGATAGAAGTAGTCGAGATGACCCCGGTTGAGGTTGTCGGCGATCCAGCTCGTCCCTCCGCCCCTCCTCGTCG
CGCCGTCGATGACCGAGATGAGGAAGCTGCTGATGAAGCTGCCGACGCCGAGGACGCTGAGGTAGAGCGCGAGCCCGAGG
CTCTTGAGCTCCACGGGCATCTGGTCGTAGAAGAACTCCTGCATGCCGACCATGGTGAACACGTCCGCCGCGCCCAGGAG
CACGTACTGCGGCATGATCCACCACAGGCTCATGGGCACCACCGCGCCGGGCAGGTCCACCACGCCGGCGTCCACCGCGG
TGCTCAGCCGCCTCATCTCCACCAGCGCGGCGACCACCAGCGCGGCCACGGCCAGGACCATTCCCGTGCCGATCCGCTGG
AGCATGGTGATACCCAAGGGGGCGCCGGAGAGCCTGCGCGCCACGGGCACCAGGACGCGGTCGTAGAGCGCGACGCAGGT
GATCATGCTGATGCCCATGAAGCACTGCAACGCCGCGGGCGGTATCTGGAACCCCGACGACCCGACCCGACCCTCCGGTC
CATCGTCGCCGCCTGCTTCGTGAACAGCGTCGGCGGCTGAGCGAACACCACGCCGTAGAGCAGGCACGTCGCCCATATCG
GGAACAGCC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3D_140
--------------------------------------------------------------------------------
-----------------------------------------------------------CTCCAGCGCGGCGACCCCGGC
CAGAGCCCAGTAGAAGTAGTCGAGGTGCGCACGGTTGAGGTTGTCCGAGAACCAGCTCTCCCCC---GTGCGCATCGTCG
CCCAGTCGACCGCCGACACGAGCACGCCGCTGGCGTAGTTCCCCACGCCCATGATGCTCATGCAGAGCGCGAGCCCGACG
CTCCGGAGCGCGTCGGGCACCTGGTCGTAGAAGAACTCCTCCAGGCCCACCATGGTGAACACGTTGGCGAGGCCGAGCAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGCACCGTCACCCCCGGACTGTCGACCAGGCCGGCGTCCCTCGCCG
CGCGGAGGCGCGCCGCCTCCACGAGCGCCGCGACGGCCATGGCGACGGACGCGATGGCCATGCCGGCGCCAATGCGCTGG
AGCATGGTGATCCCGGAGGGATGCTTGGTCACGCGCCTCGCGAGGGGCACGAAGGCGCGGTCGTAGATGGGGACGGAGGC
GATGATGGCGAGGCCGACGAAGCTCTGTAGCGCCGCCGGAGGCACGACTAGGCCTGTGGTCGC--GCCGATGCGCCGGTC
CATGGTGCTGCCCTGCTTGGTGAACAGAGTGGAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3B_146
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGCGCAGAGCCCGGC
GAGCAGCCAGTAGAAGTAGTCGAGGTGCGCGCGGTTGAGGTTGTTGGAGAACCAGCTGGCGCCG---CTCTTCTTGGTGG
CGCCGTCGATGGCGGAGATGAGGAAGCTGCTCAGGAAGTGGCCCACCCCGAAGATGCTGAGGAAGAAGGCCAGCCCCAGG
CTGCGCAGCGCGTCGGGGACCTGGTCGTAGAAGAACTCCTGCAGCCCGATCATGGCGAACACGTCCGACAGCCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGCAGCGCCACCTTGGGGTCGTCCACGAGGCCGGCGTCCCTCGCCA
CGCCCAGCCGCCTCGCCTCCACCAGCGCCGCCACCACCATGGCCACCAGCGCCAGGACCAGCCCCGTGCCGATCCTCTGC
AGCATGGTGATGCCCGAGGACAGGCGCGTGAACCGCCGCGCCGCTGGCACGAACAGCCGGTCGTAGACTGGGATGAAGGT
GATGATGGTCAGGCTGATGAACGTCTGCAGCGCCGCCGGCGGCACGCGGAA------GGTGGC--GCCGATCCGCCGGTC
CAGCGTCGCGGCCTGCTTCGTGAAGAAGGTCGACGACTGGGAGAAGATGACGGCGTAGATGATGCACGTCGCCCAGATGG
GGAACAGCCGCAGCAGGCCCCGAACTTCCTCCCGGTGCTCCGCGTTGAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTCACCATCCTCGCCCGCAAGAGTACTGCTTGTTAAA
ACAACAGATCAACCACATTCAGAGTTAGCACTGTATGTAAGCCTGACAAGATCATACATTCAGAAATCTCATGGCCAGAT
TGCAGATTTCAAACGAGAA------ATGATGGATGATGAGTGGGCATACTTGGCGCATTGGCTGGATTTGGAGCCTTTGA
GGAGCGCGACGAAGGCCCTGGCGAGGCGCGCGAAGGGGCTGGACTGGGTGGAGGTGTAGTAGCGGTAGCGGCGGGTGCCG
AGCAGGAACATGGCGAGCGCGAAGACCATGACGAGGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
ATAGCTGGAGACCATGGTAGTGGCGGCGGTGCCGGAGCACATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGACTCCTCGGGGTGGTGCTGGTCGAACTGGTCGGCGCCGAACGCCTGCGCGCAGGGCTTGTGCCCGGCCTCCGCCAGC
GCCACCAGGTAGAGCGAGACGTAGAAGATGGTCACCTGCACCGGCGACGGCGAGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3A_146
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGCGCAGAGCCCGGC
GAGCAGCCAGTAGAAGTAGTCGAGGTGGGCGCGGTTGAGGTTGTTGGAGAACCAGCTGGCGCCG---CCCTTCTTGGTGG
CGCCGTCGATGGCGGAGATGAGGAAGCTGCTGAGGAAGTGGCCCACCCCGAAGATGCTGAGGAAGAAGGCCAGCCCCAGG
CTGCGCAGCGCGTCGGGCACCTGGTCGTAGAAGAACTCCTGCAGCCCGATCATGGCGAACACGTCCGACAGCCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGCAGCGCCGCCTTGGGGTCGTCCACGAGGCCGGCCTCCCGCGCCA
CGCCCAGCCGCCTCGCCTCCACCAGCGCCGCCACCACCATGGCCACCAGCGCCAGGACGAGGCCCGTGCCGATCCTCTGC
AGCATGGTGATGCCCGAGGACAGGCGCGTGAACCGCCGCGCCGCCGGCACGAACAGCCGGTCGTAGACCGGGATGAAGGT
GATGATGGTCAGGCTGATGAACGTCTGCAGCGCCGCCGGCGGCACGCGGAA------GGTGGC--CCCGATCCGCCGGTC
CAGCGTCGCGGCCTGCTTCGTGAAGAAGGTCGAGGACTGGGAGAAGATGACGGCGTAGATGATGCACGTCGCCCAGATGG
GGAACAGCCGCAGCAGGCCCCTAACCTCCTCACGGTGCTCCGCGTTGAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTCTCCATCCTCGCCGGCAAGAG---TGCTGTTCGTC
GCAAGAGACCAAACACATTAA------------TTGGTAAGCCTGACAGCATGATGCATTCAGAATTCTCATGGCCAAAT
TGCAGATTTCAAACGAGAACGATGGATGATGATTGATGAGTGATCATACTTGGCGCATTGGCTGGACTTGGAGCCTTTGA
GGAGCGCGACGAAGGCCCTGGCGAGGCGGGCGAAGGGGCTGGACTGGGTGGAGGTGTAGTAGCGGTAGCGGCGGGTGCCT
AGCAGGAACATGGCGAGCGCCAAGACCATGACGAGGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGGAGACCATGGTGGTGGCGGCGGTGCCGGAGCACATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGGGAGA
CGGACTCCTCGGGGTGGTGCTGGTCGAACTGGTCGGCGCCGAACGCCTGCGCGCACGGCTTGTGCCCGGCCTCCGCCAGC
GCCACCAGGTAGAGCGAGACGTAGAAGATGGTCACCTGCACCGGCGACGGCGAGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr4B_158
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGC
GAGCAGCCAGTAGAAGTAGTCGAGGTGCGCGCGGTTGAGGTTGTTGGAGAACCAGCTGGCGCCA---CCCTTCTTGGTGG
CGCCGTCGATGGCGGAGATGAGGAAGCTGCTCAGGAAGTGGCCCACCCCGAAGATGCTGAGGAAGAAGGCCAGCCCCAGG
CTGCGCAGCGCGTCGGGGACCTGGTCATAGAAGAACTCCTGCAGCCCGATCATGGCGAACACGTCCGACAGCCCGAACAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGCAGCGCCGCCTTGGGGTCGTCCACGAGGCCGGCCTCCCTCGCCA
CGCCCAGCCGCCTCGCCTCCACCAGCGCCGCCACCACCATGGCCACCAGGGCGAGGACCAGCCCGGTGCCGATCCTCTGC
AGCATGGTGATGCCCGAGGACAGGCGCGTGAACCGCCGCGCCGCCGGCACGAAGAGCCGGTCGTAGACTGGGATGAAGGT
GATGATGGTCAGGCTGATGAACGTCTGCAGCGCCGCCGGCGGCACGCGGAA------GGTGGC--GCCGATCCGCCGGTC
CAGCGTCGCCGCCTGCTTCGTGAAGAAGGTCGACGACTGGGAGAAGATGACGACATAGATGATGCACGTCGCCCAGATGG
GGAACAGCCGCAGCAGGCCCCGAACTTCCTCCCGGTGCTCCGCGTTGAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTCACCATCCTCGCCCGCGAGAGTACTGCTTGTCTAA
ACAACAGATCAACCACATTCAAAGTTAGCACTGTATGTAAGCCTGACAAGATCATACATTCAGAATTCTCATGGCCAAAT
TGCAGATTTCAAACGAGAA------ATGATGGATGATGAGTGATCATACTTGGCGCATTGGCTGGACTTGGAGCCTTTGA
GGAGCGTGACGAAGGCCCTGGCGAGGCGGGCGAAGGGGCTGGACTGGGTGGAGGTGTAGTAGCGATACCGGCGGGTGCCG
AGCAGGAACATGGCGAGCGCGAAGACCATGATGAGGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGAT
GTAGCTGGAGGCCATGGTGGTGGCGGCGATGCCGGAGCACATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCGAGAGA
CGGACTCGTCGGGGTGGTGCTGGTTGAACTGGTCGGCGCCGAACGCCTGCGCGCACGGCTTGTGCTCGGCCTCCGCCAGC
GCCACCAGGTAGAGCGAGATGTAGAA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>chr3A_167
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCAGTAGAAATAGTCGAGGTGCGCGCGGTTGAGGTTGTCCGAGAACCAGCTCTCCCCG---GTGCGCCTCGTCG
CCCAGTCGATCGCCGAGACGAGCATGCCGCTGGCGTAGTTCCCCACGCCCATGATGCTCATGCAGAGCGCGAGCCCCACG
CTCCGGAGCGCGTCGGGCACCTGGTCGTAGAAGAACTCCTCCAGGCCCACCATGGTGAACACGTTGGCGAGGCCCAGCAG
CACGTACTGCGGCACCATCCACCACAGGCTCATCGGCACCGCCATCCCCGGACTGTCGACCAGGCCGGCGTCCCTCGCCG
CGCGGAGGCGCGCGGCTTCCACGAGCGCTGCCACGGCCATGGCGACGGACGCGATGGCCATGCCGGCGCCGATGCGCTGG
AGCATGGTGATCCCGGAGGGGTGCTTGGTGACGCGCCGAGCGAGGGGCACGAAGGCGCGGTCGTAGATGGGGACGGAGGC
GATGATGGCGAGGCCGACGAAGCTCTGCAGCGCCGCCGGGGGCACGACTAGGCCTGTGGCCGC--GCCGATGCGCCGGTC
CATGGTGCTGCCCTGCTTGGTGAACAGAGTGGAC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---S--------S------------------------------S-
----SS--------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----------------------------------------------------------S--------S------------
---------------------S-------S-------S-S------S---------------------------------
---------S--------SS--------------------------SS------S------S-SS---------------
--S-------------------------SS--------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------------------------------------------------S--------------------S
S---------------------------S--------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS------------SS-SSSSSSS--SSS------------------------S--------S--
SSS---S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----------SS--S-SS-S-S--S-----------S----S--------------
-------------------------------------------------SS--S-------S----S----S-S---S-S
-SSS-------SS-SSS-SSSSSSS----S---S-------------------S---S----------S----SSSS-S-
---S--S----S---S----SSSSSSSSSSS---S----------SSS-------S------S-----S-SSSSSSS---
------------S----S--------S-S---------SS-SSSS-SSSSS-SS-S----------S---S------S--
-S----------S--------SSS-S-SSS--------S--SS------S-S----------S-------S--S----SS
----S--S--SS---SSSSSS--S-SS-S-SS-S-SSSS-S--S-SSSS----S-------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_859
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CCGCGTTTCTGATCACCACT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2446
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGCTTTCATCTGGTTTGCCC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
