>input_sequence_77934
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----------------------------------------------ATGGGGCTCTGCCTGTCCGTGGCCCTGTGGAAGG
ACAAGGCCCACGCCCGCCGCCGGGCCGTGCAGCACGA------------CGGCGCCGTTGACGTGATAGTGCGTGGCGGC
GGCGGCGT---CTCTGAC---TACGGGCTTCTGGCAGGGGGCGGAGTGCCGGAGGCGG---------------TGGCGGC
GCCGAGGGCTTCGGGCGCGCTGGGCACGCCGGCGCGGCCGATATGGCAGAGGAGGGTGCTGATGGGCGTCAAGTGCCGGC
TGCCGAAGTTCAGCGGCATGATCCTGTACGACGAGCGCGGCCGGCCCGTGGGCGGCGGCGTCCGGGACAGAGCCCGTGAC
CAGGTACGTACGTGGTCACCACGTTTGCTGAACGTATTATGTGTGTGTGAATGGGTGTATCATCGTCCTGAATCTGTCTG
CCTGCAGGAGAAGCACGCCGCTGCCATTGATAACATCCTGAGGGACCTGCACTGGTCTAGCCGGTCGCCGGCGGGCAGCT
TGATTCCGGCGTCGGCCCGGTCCAGTTGA---------------------------------------------------
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--------------------------
>chr7A_1_TraesCS7A01G460700
CAGGCCATGCCCACACTCTTTCTGGTGCAACCGCTGGATGTCTCGAAAACTTTTCGCCTGCGGGTTTGTTTTCAAGATAT
GTTTGAGGATTGGATGTTGGACAACCATCTTCTACGAAGTTATTGCTGGCGTATATTTAGTTTGAAGATTGTCAACGCGG
AATAACTTTTTGTAATGAGTTTGTGGAATAAAAAATTTATCTCAATAAACAATACCAGTAAGATTTTTTTTTATTTTTTT
GAGCAAAAGGCAGGAGCTCTGTCTATGTATCAAGAGTGGAGTGAAACCAAATAGTACTATGTCAGGAGGTGCATGTTTGA
GCAAAAGGGACGCGCTGAAACCAAAGACTGCTGCCCAGGCATTGTTGGAGAAGGCCATGGCCATGCACTCCAGACTCCAG
ATTCGAAGCTTTCTTGCGGTTTGGGCGATAGGGGCGTGGCTTAAAGATGAGCGCCGTCATGTGGATATCCACTACACAAG
TATACGTACACGACAATTCAGTTGGAACCATCAGATATGCATGTTCTCTCCTCCCCCTACAGGCAGTCAGACGTGCCGTC
TTAGCTAACCTACCCACGAAGAAAGAGAGGGAGAGAAAGCAATCGCTATCGCCTATCGGTCAGATGCTGCTGTGCCGGGG
AGGGATCTCGAGCAGTGAACCCAAGCAGGAACGCCACCGGACCTCCGATCCGGGCGTTGCCCCACCGGTCCAGGCA-TGC
TTCGCACGGACGCCGCGGTGCGGTGCGGTCACGCCACCGCACCACACGTCGGGCGGTGAGGCGTGATCAGGCGGCATCAT
GGGAGCGGCAACGCTCACGGGCGGCCTGTGCGGCGCGCGCGCGCCTGGT-----CCCCCGGCCACGCTCGCTCGCCCGCC
TGCCATAAGGATCCCACCCCGCGCACACTGGTCTGGCATACTGCCGCACTCTGCATCCCGATCCAGACACACGCAGACAG
ACATAGCTTTTTTGGCAGCTCCTGCTCGGCTGCTGCGGCTGCTCCCATGGGGCTCTGCCTGTCCGTGGCCCTGTGGAAGG
ACAAGGCCCACGCCCGCCGCCGGGCCGTGCAGCACGA------------CGGCGCCGTTGACGTGATAGTGCGTGGCGGC
GGCGGCGT---CTCTGAC---TACGGGCTTCTGGCAGGGGGCGGAGTGCCGGAGGCGG---------------TGGCGGC
GCCGAGGGCTTCGGGCGCGCTGGGCACGCCGGCGCGGCCGATATGGCAGAGGAGGGTGCTGATGGGCGTCAAGTGCCGGC
TGCCGAAGTTCAGCGGCATGATCCTGTACGACGAGCGCGGCCGGCCCGTGGGCGGCGGCGTCCGGGACAGAGCCCGTGAC
CAGGTACGTACGTGGTCACCACGTTTGCTGAACGTATTATGTGTGTGTGAATGGGTGTATCATCGTCCTGAATCTGTCTG
CCTGCAGGAGAAGCACGCCGCTGCCATTGATAACATCCTGAGGGACCTGCACTGGTCTAGCCGGTCGCCGGCGGGCAGCT
TGATTCCGGCGTCGGCCCGGTCCAGTTGAATACCCCTCTGTCCTTTCCAGTTTGTTAGGCCCA-TATTAAGCAGAAGAAA
ATTCAGAAATTTCCTCTTTGCAAGCCTCATTGTTTTGGGAATAGCCAGCTAGAGCTGTGCCTACGCTAAATTCTGCCCAA
TTCTGGGGGTTCTCAATGTGACATCAACCTATGAAATGGAGGAGA---CAGAGGGCCATCCATGTAGCATTAACTAGTTG
AAAACTCTTATATTTGGATAATGGGACAACTTTATTCGTAGAGATG----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------CCAGTGTTCTGATTTTAAGCTTCTATGC
TTGTCTTGATCAATCCCCAATCAAATTAACCAACTCAAGGCCATCTTACATTTGAAGCCATTTTGCTGTGTGCTGTCTTT
GGCATAGTTTCACACTAGTAAGGCATGAATCACTTTCACAACACTAAATCTCTTCAAACAAACATACTGCACAAAGAAGA
AATATTTTCAGCTCACCGAAATTAGAACAAGTAACCAACAAACTGGGCCAA----AACTGCCTCCTCGGATTGAT-CAAC
ATACTGTGAACATCAGCAAGCTCAAAATAGTTCCCCC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TCCGGGCTATAACGGAACATTGCTGGGCGATAAGCAATGTAAGCCAGCA
TAGAAATTTTAATGCATTGCAGAATGGCTTGTTCTCGCACTTTCTTAGTTCCAATATGTGTGCA-------------TCA
GGATGAACAAGTTCATAACAAGCCA--------TGATTTTTCCTCTACTAAATGATCCATTAAGATATC-AAGATTCAGG
ATTCAAATCATCACTTTAACCCAGCGTTAACAACGGCCATGCCAGCATCTAAAAGTGTAGA--ACCAATATCCAGCTAGG
CAAAGTACACAGAAA-----------------------------------------------------------------
-------------------TAGGAATTACTATCTTACCATACATAATGAAAACTTTGTCGCGCCGTACACAATCACCAAT
TTTCATAGCATGCTCTTGGTTCATGTAATTCTGAAATTAGTTTGGCACTTCTCCTCGGCAAGCAGCCACATAGTCTTCAG
CAAGGTGCGGTGCAGCTTCCTTGTGA
>chr7B_681
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----------------------------------------ACCTCCGATCCGGGGCTTGTCCCACCCATCCAGGCATTGC
TTGACACGGACGCCGCGGTGCGGTGCGGTCACACCG-----CCACACGTCGGGCGGTGAGACGTGAACAAGCGGCATCAT
GGGAGCGGCAAGGCTCACGGGCGGCCTGTGCGGTGCGCGCGCCTGGTCCCCCGGCCC-CCGCCACGCTCGCTCGCCCGCC
TGCCATAAGGATCCCACCCCGCGCACACTGTCCCGGCATACTGCCGCGCTCTGCATCCCGATCCAGACACAGACACACAG
ACACAGAGCTTTTGGCAGCTCCTGCT---------CGGCTGCTCCCATGGGGCTCTGCCTGTCCGTGGCCCTGTGGAAGG
ACAAGGCCTACGCCCGCCGCCGGGCCGTGCAGCACGA------------CGGCGCCGTCGACGTGATGGTGCGTGGCGGC
AGCGGCGGCGGCGTCACTGGATACGGGCTTCTGGCAGGGGGCGGAGTGCCGGAGGCGGAGGAGGCCGTGGCCGTGGCGGC
GCCGAGGGCTTCGGGCGCGCTGGGCACGCCGGCGCGGCCGATATGGCAGAGGAGGGTGCTCATGGGCGTCAAGTGCCGGT
TGCCGAAGTTCAGCGGCATGATCCTGTACGACGAGCGCGGCCGGCCGGTGGGCGGCGGCGTCCGGGACAGAGCCCGTGAC
CAGGTACGTG----GTCACCACGTTTGCTCAAC---TTACGTGTGTGTGAATGGATGTATCATTGTCCTGTACCTGTCTG
CCTGCAGGAGAAGCACGCCGCTGCCATCGATAACATCCTGAGGGACCTGCACTGGTCCAGTCGGTCGCCGGCGGGCAGCT
TGATTCCGGCGTCGGCCCGGTCCAGTTGAACACCGCTCCGTCCTTTCCAGTTTGTTAGGCCCATTATTAAGCAGAAGAAA
TTTCAGAAATTTCCTGTTTGCAAGCCTCATTGGTTTGGGAGTAGCCAGCCAGAGCTGTGCCTACGCTAAATTCTGCCAAA
TTCTGG---TTCTCAATGTGACATCAACCAATTAAATGGAGGAGAGATCAGAGGGCCATGCATGTAGCATTAACTAGTTG
AATGCTCTTATATTTGGATAATGGGACAACTTTATTCGTAGAGATG----------------------------------
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----------------------------------------------------CCAGTACTCTGA-TTTAAGCTTCTATGC
TTGTCTTGATCAGTCCCCAATCAAATTAATAAATTCAAGGCCATCTTACATTTGAAGCCATTTTGATGTATGCTGTTTTT
GGCATAGTTTCATACTAGTAAGGCATGAATCACTTTCACAACATTAAATCTCTTCAAACAAACATACTGCACAAAGAAGA
AAGATTTTCAGCTCACCGAAATTAGAACAAGTAATCAACAAACTGGGTCAAAATTAACTGCCTCCTCGGATTGATTCAAC
ATACTGTGAACATCAGCAAGTTCAAAATAGTTCCCCCCAAAAAATAAAGGGTCCAGAATTGTCATTCAAAGGAAATTTTA
TGATGACATGGACATATCGATCAGTACTCATGAATCTAATTACTAGCTTCGTCAAGTGTTAGCAATGACCAAACTAGCAT
GCCTCATTCATACTATACCAGAGGCCATCATCTTCTTAGGCAAGAGCATTGAAGCAAAGTTTGCCAACTTACGGA-----
------------------GCCAAGCAAAATCTTTGTGTTGCAATAAGGATTTTCGAATTTTAATTGCCTTATGAACCTTT
ACACCACAGAACTGGGATCATAGTCAGGCCGTCCGGGCTATAACGGAA-----------------CAATGTAAGCCAGCA
TAGAAATTGTAATGCATTGCAGAATGGCCTATTCTCGCACTTTTTTAATTCCAATATGTGCGCA-------------TCA
GGATGAACAAGTTCATAACAAGCCA--------TGATTTTTCCTCTACTAAATGATCCATTAAGATATC-A-------GG
ATTCAAATCATCACTTAAACCCAGCGTTAACAACGGCCATACCAGCATCTAAAAGTGTAGA--ACCAACATCCAGCTAGG
CAAAGTACACAGAAA-----------------------------------------------------------------
-------------------TAGGAATTC----------------------------GTCGCACCGTATACAGTTACCAAT
TTTCATAGCATGCTCTTGGTTCATGTAATTCTGAAATTAGT-TGGCACTTCTCCTCGGCAAGAAGCCACATAGTCTTCAG
CAAGGCGCGGTGCAGCTTCCTTGTGA
>chr7D_681
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----------------------------------------ACCTCCGATCCGGGCGTTGTCCCATCGATCTAGGCA-TGC
TTCACACGGACGCCGCGGTGCGGTGCGGTCACACCACCACACCACACGTAGGGCGGTGAGACGTGAACAGGCGGCATCAT
GGGAGCGGCAAAGCTCACGGGCGGCCTGTGCGGCGCGCGCGCGCCTGGT-----CCC-CGGCCACGCTCGCT-------C
TGCCATAAGGATCCCACCCCGCGCACACTGGCATGGCATACTGCAGCGCTCTGCATCCCGATCCAGACACAGACACACAG
ACACAGAGCTTTTGGCTGCTCCTGCT---------CGGCTGCTCCCATGGGGCTCTGCCTGTCCGTGGCCCTGTGGAAGG
ACAAGGCCTACGCCCGCCGCCGGGCCGTGCGGCGAGGCCAGCAGGAGGCCGTCGACGTCGATGTGATGGTGCGTGGCGGC
GGCGGCAGCAGCTCTGTC---TACGGGCTTCTGGCAGGT---GGAGTGCCGGAGGCGGAGGAACCCGTGGCCGTGGCGGC
GCCGAGGGCTTCGGGCGCGCTGGGCACGCCGGGGCGGCCGATATGGCAGAGGAGGGTGCTGATGGGCGTCAAGTGCCGGC
TGCCGAAGTTCAGCGGCATGATCCTGTACGACGAGCGCGGCCGGCCGGTGGGCGGCGGCGTCCGGGACAGAGCTCGTGAC
CAGGTACGTGCGTGGTCACCACGTTTGCTCAAC---TTACGTGTGTGCGAATGGATGTATCATTGTCCTGTACCTGTCTG
CCTGCAGGAGAAGCACGCCGCTGCCATTGATAACATCCTGAGGGACCTGCACTGGTCCAGCCGGTCGCCGGCGGGCAGCT
TAATTCCAGCGTCGGCCCGGTCCAGTTGAACACCGCTCTGTCCTTTCCAGTTTGTTAGGCCCA-TATCAAGAAGAAGAAA
GCTCAGAAATTTCCTGTTTGCAAGCCTCATTGTTTTGGGAATAGCCAGCTAGAGCTGTGCCTACGCTAAATTCTGCCCAA
TTCTGGGGGTTCTCAATGTGACACCAACCAATGAAATGGAGGAGAGATCAGAGGGCCATGAATGTAGCATTAACTAGTTG
AATACTCTTATATTTGGATAATGGGACAACTTTATTCGTAGAGATG----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------CCAATGTTCCTA-TTTAAGCTTCTATG-
--GTCTTGATCAATCCCCAATCAAATTAACCAACTCAAGGCCACCTTACATTTGAAGCCATTTTGCTGTATGCTATTTTT
GGCATAGTTTTATACTAGCAAGGCATGAATCACTTTCACAACATTAAATCTCTTCAAACAAACATACTGCACAAAGAAGA
AAGATTTTCAGCTCACAAAAATTAGAGCAAGTAACCAACAAAGTGGGTCAAAATTAACTGCCTCCTCGGATTGAT-CAAC
ATACG-------TCAGCAAGTTCAAAATAGTTCCCCCCAAAAAATAAAGGGTCCAGAATTGTCATTCAAAG-AAATTTTA
TGATGCCGTGGACATAT----CAGTACTCATGAATCTAATTACTAGCTTCATCAAGTGTTACCAATGACCAAACTAGCAT
GCCACATTCATACCATACCAGAGGCCATCATCTTCTTAGGCAAGAGCA-----------------------CGGA-----
------------------GCCAAGCAAAATCTTTGTGTTGCAGTAAGGATTTTCGAATTTTAATTGCCTTATGAACCTTT
ACACCACAGAACTGGGATTATAGTCAGGCCCTCCGGCCTATAACGGAACATTGCTAGGCGATAAGCAATGTAAGCCAGCA
TAGAAATTTTAATGCATTGCAGAATGGCCTGTTCTCGCACTTTCTTAGTTCCAATATGTGTGCA-------------TCA
GGATGAACAAGTTCATAACAAGCCA--------TGATTTTTCCTCTACTAAATGATCCATTAAGATATC-AAGATTCAGG
ATTCAAATCATCACTTTAACCCAGCGTTAACAACGGCCATACCAGCATCTAAAAGTGTAGA--ACCAACATCCAGCTAGG
CAAAGTACACAGAAGTACTCCCTCAGTTCCATATTACTTGTCGCTGATTTAGTACAAAGTTGTACTAAATCAGCGACAAG
TAATATGGAACGGAGGGAGTAGGAATTACTATCTTACCACACATAATGAAAACTTTGTCGCACCGTACACAGTTACCAAT
TTTCATAGCATGCTCTTGGTTCATGTAATTCTGAAATTAGT-TGGCACTTCTCCTCGGCAAGCAGCCACATAGTCTTCAG
CAAGGTGCGGTGCAGCTTCCTTGTGA
>chr7A_1666
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-------------------------AACCAATGAAATGGGGGAGA---GAGAGGGCCATGTATGTAGCATTAACTAGTTA
AATAGTCTTATATTTGGATAATGGGACAACTTTATTCGCAGAGATGTCAGTTGAGGGAGTCCTGGATTAGGGGGTGTCCG
GATGGCCAGACTATACCTTCAACCGGACTCCTGGACTATGAAGATACAAGATTGAAGACTTCGTCCCATGTCCGAAAAGG
ACTTTCCTTGGCATGGAAGGCAAGCTTGGCGATACGGATATGCAGATCTCCTACCATTGTAACCGACTTTGTGTAACCCT
AACCCTCTCCGGTGTCTATATAAACCGGAGGGTTTTAGTCCGTAGGACAACATACAGAACAATAATCATACCATAGGCTA
GCTTCTAGGGTTTAGCCTCTCCGATCTCGTGGTAGATCTACTCTTGTACTACCCACATCATCAATATTAATCAAGCAAGA
CGTAGGGTTTTACCTCCATCAAGAGGGCCCGAACCTGGGTAAAACTTCGTGTCCCTTGCCTCCTGTTACCATCCGGCCTA
GACGCACAGTTCGGGACCCCCTACCCAAGATCCGCCGGTTTTGACACCGACACCAGTATTCTGA-TTTGAGCTTCTATGC
TTGTCTTGATCAATCCCCAATCAAATTAACCAACTCAAGGCCATCTTACATTTGAACCTATTTTGCTGTATGCTGTTTTT
GGCATAGTTTCACACTAGTAAGGCATGAATCACTTTCATGACATTAAATATCTTCAAACAAACATACTGCACAAAGAAGA
AATATTTACAGCTCACCGAAATTAGAACAAGTAACCAACAAACTGGGCCAAAATTAACTGCCTCCTCAGATTGGT-CAAC
ATACTGTGAACATTAGCAAGTTCAAAATAGTTTCCCCC------------------------------------------
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--------------------------
>chr6D_1971
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-------------------AATTAGAACAAGAAACCAACAAACTGGGCCAAAA----CTGCCTCCACAGATTGAT-CAAC
ATACTGTGATTATCAGCAAGTCCAAAATAGTTTCTCACAAAAAATATT--GTCTAGAATTGTCATTCAAAGGAAATTTTA
TGATGACATGGACATAC----CACTACTCATGAATCTAATTACTAGCTTCATTAATCGTTAGCAATGACCAAACTAGCAT
GTCACACTCATACTATACCAGAGGTCAGCATCTTGTTAGGCGAGCGCA-----------------------CTGAAACAA
AGGTTGCAAACTTACTGCGCCAAGCAAAATCATTGTGTTGCAGTAAGGATTTTAGATATTTAATTGCCTTATGAACCTTT
ACACCACAGAAGTGAGATTTCAGCCTGGCAGGCGAT----------AA-----------------GAATGTAAGCCAGCA
TAGAAATTTTAATGCATTGCATAATGGCCTGTTGTCACACTTTCTTAGTTTCAATATCTGTGTTAAATAACATGGCTTCA
GGATGAACAAGTTCATAACAAGCCAACAGACCATGATTACTTCTCTACCAAATGATACACTAAGATATCTAAGATTCAGG
ATTCAAATCATCAGTTTAACCAACCGTTAGCAATGACCATCCCAGCATCTAACAGAGTGGAAGACCAACATCCAGTTAGT
CAAAGTACACCGAAA-----------------------------------------------------------------
-------------------TAGGAATTACCAGCTTACCACACA--ATCAAAACTTTGTTGCACCGTACAGAGTTTACCAA
ATTCATAGCCCATTCTTGGTTCATGTAAATCTGAATCTAGT-TGGCACTTCCCCTTTGCAAGCAGCTGCATAGTCTTCGG
CAAGGTGTGGTGCAGCTTGCTTGT--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-------S------------
---S----------------------------S-----S---------------------S-----S-------------
-----------S---------------------------------------------S----------------------
-------------------------------S---------------S-----------------------SS--S----
---S--SSS-----------------SSSSSSSSS---------------------------------------------
--------S-------------------------------------------------S--------S------------
-------S--------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------S-------------------S---SSS---S--------------S--------S------S-S-------
---------------------------------------------------------S----------------------
------------------------------S---S---------------------------------------------
S--------------S----------------------------------------------------------------
-----------------------------S-----------------------------S--------------------
--S-----------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
---------------------------------------------------------------------S------S---
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
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-------------------------------------------------------S------------------------
----------------------------S---------------------------------------------------
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----------------------------------------S---------------------------S-----------
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---------------------------------------S---------------------S---------S-S------
-----------------------------------------S--------------------------------------
--------------------------
>forward_453
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---------------------------------GCGTGGCTTAAAGATGAGCG---------------------------
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>reverse_1431
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----------------------------------------------------------------------AATCTGTCTG
CCTGCAGGAG----------------------------------------------------------------------
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>forward_471
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---------------------------------------------------CGCCGTCATGTGGATATCCA---------
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>reverse_1433
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------------------------------------------------------------------------TCTGTCTG
CCTGCAGGAGAA--------------------------------------------------------------------
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>forward_570
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----------------------------------------------------------------------ACGTGCCGTC
TTAGCTAACC----------------------------------------------------------------------
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>reverse_1551
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------------------------------TACCCCTCTGTCCTTTCCAGT-----------------------------
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--------------------------
