>input_sequence_77885
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ATGGCGACCGAGGAAGGCGAGAAGAAGATGATCACTCTCAAGAGCTCAGACGGTGAGGAATTTCAGGTCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCT--------TGCGCCGACAACGGGATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACTGGCCGACTCC--------
-ACCGACGCCAGCTCCTCCATCTCTACTGCAGCCGCCGCCCCAGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGTCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACC------GTTGCAGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGCAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAG-----------------
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>chr6D_1_TraesCS6D01G044400
TTACTAAAAAATTTGGCAACACTTGTAATGACAATCAGTGTACAAAATTACAGTCCCTCGACAAC---------------
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---------------------GTAGATGTATGTGCAGGTAAA-TCTAGAACGGATAAATTTTGTACAACTCTGTTTCACT
ACAGAACTAGCATAATCTCGAACAGTAAATATGAGCTAAATCGACGTACATCCCATTAAGTTCAATCACAACATATCCAC
CACAGAAATCCATGTTTGCATTAAGA-----AGAATTAAGGTTTCAAAAGCGATCTGGTTCATTGTTTTTCCCAATAATA
AATACTGGATCATTGTTTTTCCTCATAGTACAGATCATTGGTTTTCCCA--ATAATGCTCCGGAAGACCTGAAGCAAAGC
GATCTGGCTTTCAGCAGGAACAGGGCTCCGCAAGACAAGGGGCAGAAGGGATGGATTTGGCACGTTGTATTGATCTTTGC
GTG--------CAGCCAGGATCCAGTCTCTGTGG--AAGTTTAAGGCGTACCAGAGTTCTTCGTCTCTAGCCGCAGACCG
CCCGCCATGCATGGTGATCGGGAACGTGGGTTTTGCACGTCTGGTCTGTGGAGGGCTGCCCTTGCAAATCTGCACGATTA
ACTAAAGGACGTACAGTGCCGGAGGCGGGCGGCTTAGTGCAAAT-ATTCCTACGACTAAGCCCACACACAGAATTTAAAT
CAGATGACTGGGAACGAGAGGATATAGGGGATTCATAAGATATACGAGGCCTATATCCAGAGCGTGATTTTTGGCCTCGG
TTATCTTTGGAAGCAGAAAATAAGGAAACGG-AACAACTAGAGGAGGCCGGGCCGTACTCGAGTCGTCCC--GCTGGCTA
AGATGAATACGAAACGAGCACGA--------------CCC-GAGTC-----------TAACCTAGGCATCGCCT-CACCG
TCCCAATAAATTCTCCCGGTTCCT----CGCC---CTAG--CCCGACACGCC-AAGAAGCTCC-----TGTCTTTCGTTA
GCTCTTCCGTCGCCG----GGTC-CT-TTTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCCTCC-GAACG
ATGGCGACCGAGGAAGGCGAGAAGAAGATGATCACTCTCAAGAGCTCAGACGGTGAGGAATTTCAGGTCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCT--------TGCGCCGACAACGGGATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACTGGCCGACTCC--------
-ACCGACGCCAGCTCCTCCATCTCTACTGCAGCCGCCGCCCCAGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGTCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACC------GTTGCAGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGCAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAAG-AGTAC--CAC-
---CTAGCTAGGCACTGTTG-CGTTGAATTAATGA-------AGTACTCTTCCTTTTCGTTTAGACTTCGTATTATGCAA
GAAGAAACCTATCGTGGTCCGTGGC--------CATT-----------ACTTGTGAAACTGAATTGTTA------TTTGT
AGAGTGGATGTTTGGCTTGGTAACATCATCC---TTAG---CTGATTTTTCCCGTGTGGTTTGAGATATTTTTGGCTATT
TCC--GATTTTCTATCTACAGATTTGCAAAATATCCGTCGACATGATTCTTCAGTTTGAATTTCGTGACCGTTGGACCGT
TGTCATGAATCTCTTGTCCGTCGCATGGAGCGGCGTACGTTTTAGTTAAAAGAAAATTG-GGTTACAGGTCTCCAGTTTT
CACCCACCCTGGTCTTGACGCTGACCAGGTCCCCAAGATCCTGTGTCACTTCGTCGTTTTTGCCAGAGCCCAGCGAGAGG
AGGCGGGGGTTCTTGGGCGGCCGAGAGACAGGTATGGCGACCCTCTACCCCCGACGTCCATG--CAGCGGGAACATTGTC
CATGGATGTTTTCTGTTACTCAAAGTGTACTTCATATATCCTTCTTTAAAGCAAACTAACATTCCTGCGATCTTTTCTTA
GCTGAATAGTTCG-------------AAGAATATGCAGATGGCTGATCGCAGATAGTATATTTTCT---TCAGAGTTATC
TGTGCTCCTTAGATGACTTAGGTTCCTGGCCTGTCTACGCGGTAAAATCATGCAGAATAAAAGTAGTGTGGAGCTTCATC
AGGGAATTTGACTAGCTTCGCTGTTGCTCTAAGCTCAATGTAGAGCGCCAATTGACCTGAATATTAGCCTTATACTTTTG
AAGATGTATTGCTTCATTTATTTATGAAAATAACATTTTTCTAAGGATTACTGCAATCAGCAGTTACAGTTTGTCTGACA
CATTAGCAAATGCTAATAGCAGTTTCCATTTGTATCACGTTGTAGCAAATGCTGTTTGCGGTTAGATTCTACTACATCCG
TCCCACATTA
>chr6B_1
TTGCTATAAAAACTGGC-ACACTTGTAATG-CAATCAGTGTACAAAAATACAGTCCCTCGACAAC---------------
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---------------------GTAGATGTATGTGCAGGTAAAATCTAGAGCGGATAAA-TTTGTACAACTCTGTTTCACT
ACAAAACTAGCACAATCTCAAACAGTAAATATGAGCTAAATCGACGTACATCCCATTAAGTTCAGTCACAACATATCCAC
CACAGAAATCCATGTTTGCATCAAGTTAAGGAGAAT--------CAAAAGCGACCCGGTTCATTGTTTTTCCCAATAATA
AATACTGGATCATTGTTTTTCCTCATA---CAGATCATTGGTTTTCCC--------------------------------
-------------------------------AAGACAAGGGAGAGAAGAGATGGATTTGGGACGTTGTATTGATCTTTGC
GTG--------CTGCCAGGATCCAGTCTTAGTGC--AAGTATAGGGCGTACGAGAGTTCTTCGTCTCTATCCGCAGACCG
CC-GCCATGCATGGTGATCGGGAACGTGGGTTTCGCACGTCTGGTCTGTGGAGGGGTGCCCTTGCAAATCTGCACGATTA
ACTTACGGACGTACAGGACCGGAGGCGGGCGGCTTAGTGCAAAAAATTCCTACGACTAAGCACACACACAGAAATTAAAT
CGGATGATTGGGAACGAGAGTATATAGGGGATTCATAAGATACACGAGGCCTATATCCAATGCGTAATTTTTGGCCTCGG
TTATCTTCGGAAGAAGAAAATAAGGAAACGG-AACTACTAGAGGAGGCCGGGCCGTACTCGAGTCGTCCC--GCTGGCGA
AGATGAATACGCAACGAGCACGA--------------CCCCGAGTC-----------TAACCTAGGCACCGCCT-CACCG
TCCCAATAAATTCTCCAGGTTCCT----CACT---CTAG--CCCAACACGCA-AAGAAGCTCC-----TTTCTCTCGTTA
GCTCTTCCGCCGCCT----CGTC-CA-TTTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCCTCC-GATCG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCAGACGGTGAGGTATTTCAGGTCGAGGAGGCGGT
----------------------CGCCACATGATCGAGGACGACTGCGCCGACAACGGGATCCCGCT-CCCCAACGTCGAC
TCGAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACTGGCCGACTCC--------
-ACCGACGCCAGCTCCTCCACCTCTACTGCAGCCGCCGCCCCAGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAACGTCGACCAGGCCACCCTCTTTGACCTCATCCTGGCTGCAAACTAG-TCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACAGTTGCAGTTGCAGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAACG
ACTTCACACCCGAGGAGGAGGCGGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAGG-AGTAG--CAC-
---CTAGCTAGGCACTGTCGAAGATATATTAATGCTA--------AGTATTTTTTTTCTTTTAGACATCGTATTATGCAA
GAATAAACCTATCGTGG-------------------TCAGTGATCATTACTTGTGAAACTGAATTGTTA------TTTGT
AGAGTGGATGTTTGGCTTGGTAACATCATCC---TTAG---CTGATTTTTGCCGTGTGGTTTGAGTAATTTTTTTGGATA
TTTTTGATTTTATATCTACAGATTTGCTAAAGATCAGTCGACATGATTTTCAT-----------GTGGCCGTTGGATCGT
TGTCATGAATCTCTGCTCCGTCGCACAGAGCGGCGCATGTTTTAGTTATTATTATTTTCAGGTTACAGGTCTCCACTTTT
CACCCACCCTCGTCTTGACGCCGACAAGGTCCCCAAGATCCTGCGTCACTTCGACGTTTTTGCTAAAGCCCAGCGAGAGG
AGGAGGCGGTTTCTGCGCAGCCGAGAGATAGGTATGGCAACCTTCTACCCCTGACGTCCATGATCAGCGGGAACATTGTC
CATGGATGTCTTCTGTTACTCAAAGTGTACATGATATATCCTTCTTTAAAGCAAACTACCATTCCTGGGATATTTTCTTA
GCTCAAGAGTTCGTTGATTAAAAAAGAAGAATATGCAGATGGCTGATGGAAGATAGTACATATTCTTGGTCAGAGTTATC
TGTGCTCCTT---TGACTTAAGTTCCAGGCCTGTCTACGGGATAAAATCATGGAGAATAAAAGTAGTGTGGAGCATCATC
AGCGAACTTGACTAGCTTAGCAGTTGCTCTAAGCTCAATTTAGAGCGCCAATTGACCTGAATATAT-CCTTATACTTTTG
AAGATGTATTACTTCATTTATTTATTAAAATAACATTTTTCTAAGGATTACTGCAATTAGCAGTTACAATTTGTCTCACA
CATTAGCAAATGCTAATAGCAATTTCCATTTGTATCACGTTGTAGCAACCGCTATTTGCGTTTAGGTTCTACTACCTCCG
TCCCACA---
>chr6D_13
AATGA--------------------------CAATCAGTGTACAAAATTACAGTCCCTCGACAATGTAGATGTATGTGCA
AGTAAAATCTAGAAGTGTCTAGGGCATATTTAGATGTGCTCTAGTTATTGCACATCTAAGTGACTCAATCAAACTTGAAA
GGAAAGAATAAAGGATAAAGAAAATGCTTGCACGAATCTTATCATAAAATCAATGGCATAGGACTTAGATGTGCAATACT
TAGAGCACATCTAGATATGTTTTAGCAAAACTGAATCTAGAACAACGATTGGCAACACTTGTAATGACAATCAGTGAACA
AAATTACAGTCCCTCGACAATGTAGATGTATGTGCAGGTAAAAACTAGAACGGATAAATTTTGTTAAACACTGTTTCACT
ACAAAACTTGCATAATCTCAAACAGTAAATATGAGCTCAGTCGACGTATATCCCATTAAGTTCAATCACAACATACCCAC
CATAGAAATCCATGTTTGCATCAAGTTAAGGAGAATTAAGGTTTCAAAAGGGATCTGCTACATTGTTTTTCCAAATAATA
ATTACTGGATTATTGT----------------------------------------------------------------
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>chr6D_95
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---------------------------------------------------GGATACATTTCGTACAACTCTGTTTCACT
ACCAAACTAGCATAATCTCGAACAGTAAATATGCGTTAAACCGACGTACATCCCATTAAGTTCAATCACAACATATCCAC
CACAGAAACCTATGTTTGCATCAAGTTAACGAGAATTAAGTTTTGAAAAGTGATTTGGTTCATTGTTTTTCCCAATAATA
AGTAGTGGATCAATGTTTTCCCTCATA---CAGAGCATTGTTTTTCCCAATATAATGCTCCTGAAGACCTGAAGCAAAGC
GATCTG-CTTTTAGCAGGAACAGGGCACCGCAAGGCAAGGGGCAGAAGAGATGGATTTGGGATGTTGTATTAACCTTTGC
GTGTACGCGTGCAGCCAGAATCCAGTCTTC-TGC--AAGTTTAGGGCGTACGAGAGTTCTTCGTCTCTAGCCGCAGGCCG
CC-GC----CATGGTGATCGGGAACGTGGGTTTCGCACGTCTGGTCTCTGGAGGGGTGCCCTTGCAAATCTGCATGATTA
ACTTACGGCCGTCCAGGACCGGAGGCGGGCGGCTTAGTGCAAAAA-TTCCT-----------------------------
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----------------------------------------ACGACTGAGCAAACACGCAGGATTTAAATC-----GGATG
ACTGGGAACGAGAGGATACAGGGG--------------------------------------------------------
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>chr7A_117
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-------------------------------------------------------------------------TTTCACT
ACCAAACTAGCATAATCTCGAACAGTAAATATGAGCTACATCAT-GTGCATCTCATTAAGTTCAATCACAACATATCCAC
CACAGAAACCTATGTTTGCATCAAGTTAACGAGAATTAAGTTTTGAAAAGTGATTTGGTTCATTGTTTTTCTCAATAATA
AGGACTGGATCATTGTTTTCCCTCATA---CAGAGCATTGTTTTTCCCAATATAATGCTCCTGAAGACCTGAAGCAAAGC
GATCTG-CTATCAGCAGGAACAGGGCACCGTAAGGCAAGGGGCAGAAGAGATGGATTTGGGATGTTGTATTAACCTTTGC
GTGTATGCCTGCAGCCAGGATCCAGTCTTG-TGGAAAAGTTTAGGGCGTACGAGAGTTCTTCGTCTCTAGCCGCAGGCCG
TC-GC----CATGATGATCGGGAACGTGGGTTTCGCACGTCTGGTCTGTTGAGGGGTGCCCTTGCAAATCTGCACGATTA
ACTTAC-------------CGGAGGCGGGCGGCTTAGTGCAAAAA-TTCCT-----------------------------
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----------------------------------------ACGACTGAGCAGACACGCAGGATTTAAATT-----GGATG
ACTGGGAACGAGAGGATATAGGGG--------------------------------------------------------
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>chr1A_117
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-------------------------------------------------------------------------TTTCACT
ACCAAACTAGCATAATCTCGAACAGTAAATATGAGCTACATCAC-ATGCATCCCATTAAGTTCAATCACAACATATCCAC
CACAGAAACCTATGTTTGCATCAAGTTAACGAGAATTAAGTTTTGAAAAGTGATTTGGTTCATTGTTTTTCTCAATAATA
AGTACTGGATCATTG--TTCCCTCATA---CAGAGCATTGTTTTTCCCAATATAATGCTCCTGAAGACCTGACGCAAAGC
AATCTG-CTTTCAGCAGGAACAGGGCACCGCAAGGCAAGGGGCAGAAGAGATGGATTTGGGATGTTGTATTAACCTTTGT
GTGTACGCCTGCACCCCGGATCCAGTCTTC-TGG--AAGTTTAGGGCGTACGAGAGTTCTTCGTCTCTAGCCGCAGGCCG
CC-GC----CATGGTGATCGGGAACGTGGGTTTCGCACGTCTGGTCTGTTGAGGGGTGCCCTTGCAAATCTGCATGATTA
ACTTACGGACGTACAGGACCGGAGGCGGGCGGCTTAGTGCAAAAAATTCCT-----------------------------
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----------------------------------------ACGACTGAGCAGAAACGCAGGATTTAAATC-----GGATG
ACTGGGAACGAGAGGATATAGGGG--------------------------------------------------------
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>chr2D_769
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-----------------------GGAAACGGAAACTACTAGAGGAGGCCGGGCCCTACACGAGTCGTCCCCTCCTGGCGA
AGATGAATACGAAACAAGCACGACCACGACCCTGACTCCCCGAGTC-----------TAACCTAGACATCGCCT-CACCG
TCCCAATAAATTCTCCCGGTTCCT----CACCTAGCTAG--CCCAATACGCA-AAGAAGCTCC-----CGTCTCTCGTTT
GCTCTTCCGCCGCCGCGTACGTC-TT-GTTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCGTCT-GATCG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTGAGGAATTTCAGATCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGGATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAACACGTCCAGGCCAGCCCCAAACCGGCCGACTCCGGTGCTGC
CGCCGACGCCAGCTCCTTCACCTCTACTGCAGCCGCCGCCCCTGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACC------GTTGCAGACATGATCAAGGGGAAGACCCCGGAGGAGATCCGCAAGACTTTCAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGGAAATC----CGCAGGGAGAACCCGTGGGCTTTTGAGTAGAGAAG-AGAAG--CAT-
---TTAGTTAGGCACGGTTT-CATTGAATTACTGC---T--TAGTATTCA------TCTTTTATACTTCGTATTATGCAA
GAAGAAACCTATCGTGGTCGGTTGTCATTAGTTCATT-----------ACTTGTGAAACTGAATTGTTA------TTTGT
CAAGTGGATGTTTTGATTGATAACATTATCC---TTAG---CTGATTTATG-CGTGTGATTTGAGATATTTTTGGCTA--
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>chr5A_769
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-----------------------GGAAACGGAAACTACTAGAGGAGGCCGGCCCCTACTCGAGTCGT--CCCCCTGGCGA
ATATGAATACGACACGAGTACGA--------------CCCCGAGTC-----------TAACCTAGACCCCGCCT-CACCG
CCCCAATAAATCCTCCCGGTTCCC----CACC---CTAG--CCCAACACGTACGCAAAGAAGCTCCTGTGTCTTTCGTTC
GCTCTTCCGCCGCCG----CGTC-TT-TTC--GCTACTAACCAGG----GTTTCGTTTCGCCTCCCAATCCTTC-GATCG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCCGACGGTGAGGAATTTCAGGTCGAGGAGGCGGT
CGCCATGGA-TCGCAGACCATCCGCCACATGATAGAGGACGACTGCGCCGACAACGGCATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGGCTGACTCCGGCGCCGC
CGTCGACGCCAGCTCCTCCACCTCTACTGCAGCAGCCGCCCCCACCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
ATCAAGGTCGACCAGAACACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCAGACATGATCAAGGGCAAGACTCCGGAGGAGATCCGCAAGACTTTCAACATTAAGAATG
ACTTCACACCAGAGGAGGAGGCGGAGATC----CGCAAGGAGAACTAGTGGGCTTTTGAGTAGAAAAA-AGAGTAACAC-
---CTAGCTAGGCACTGTTT-CGTTGAATTACTAC---T--TACTATTTGTCTTTCTTTTTTAGACTTCGTATTATGCAA
GAAGAAACCTATCATGG-------------------T-----------ACTTGTCAAACTGAATTGTTA------TTTGT
CAAGTGGATATTTTGATTGGTAATATCATCC---TTAG---CTGATTTATG-CGTGTGATTTCAAATATTTTTGGCTAT-
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>chr5D_769
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-----------------------GGAAACGGAAACTACTAGAGGTGGTCGGTCCCTACTCGAGTCGTCTCCTCCTGGCGA
AGATGAATACGAAACGAGCACGA--------------CCCCGAGTC-----------CACCCTAGGCA-CGTCT-CCCGG
CCCCAATAAATATCCCCGGTTCCC----CACC---CTGG--CCCAACACGTACGCAAAGAAGCTCCTGTGTCTTTCGTTA
GCTCTTCCGCCGCCG----CGTC-TT-GTTG---------CTAGG----GTTTCGTTTGGCCTCCCAATCGTCC-GATCG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTGAGGAATTTCAGGTCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAATGGCATCCCGCT-TCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATTGAGTATTGCAAGAAGCATGTCCAGGCCAGCCCCAAACCGGCCAACTCTGGCGCCGC
CGTCGACGCCAGCTCCTCCACCTCTACTGCAGTCGCCGCCTCCGCCGAGGACCTCAAGAGCTTTGACGCT----GAGTTC
ATCAAGGTCGACCAGAACACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCAGATATGATCAAGGGGAAGACTCCGGAGGAGATCCGTAAGACTTTCAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCTGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAAAGAGTAG--CAC-
---CTAGCTAGACACTGTTT-CGTTGAATTACTGC---T--TACTATTTGTC--TTTTTTTTAGACTTCATATTATGCAA
GAAGAAACCTATCGTGGT------------------------------ACTTGTGAAACTGAATTTTTA------TTTGT
CAAGTGGATGTTTTGATTGGTAACATCATCCT---TAGCTTCTGATTTATG-CGTGTGATTTGAGATATTTTTGGCTAT-
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>chr5B_769
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-----------------------GGAAACGGAAACTACTAGAGGTGGCCGGGCCCTACTCGAGTCGTCTCCTGCTGGCGA
AGATGAATACGGAACGAGCACGA--------------CCCCGACTCGTCCCCGAGTCCACCCTTGGCACCGTCT-CCCGG
CCCCAATAAATATCCCCGGTTCCC----CACC---CTATATCCCAACACGTATGCAAAGAAGCTCATGTGTCTTTCGTTC
GCTCTTCCGACGCCACGTCTTG--TT-GTTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCGTCCGGATCG
ATTGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTGAGGAATTTCAGATCGAGGAGGCGGT
CGCCATGGAGTTGCAGACCATCCGCCACATGATCGAAGACGACTGCGCCGACAACGGCATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGACCGAATCCGGCA----
--------CCAGCTCCTCCACCTCTACTGCAGCCGCCGCCCCCGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTCAC
TTGCCAGACT------GTTGCAGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGAAGGCGGAGATC----CGCAGGGAGAATCAGTGGGCTTTTGAGTAGAAAAATAGGAG--CAC-
---CTAGCTAGTCACTGTTT-CGTTGAATTACTGC---T--TACTATTTGTCTTTCTTTTTTAGACTTTGTATTATGCAA
GAAGAAACCTATCGTG--------------------T-----------ACTTGTGAAACTGAATTGTTA------TTTGT
CAAGTGGATGTTTTGATTGGTAACATCATCCT---TAG---CTGATTAATG-CGTGTGATTTGAGATATTTTTGGCTAT-
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>chr2B_826
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---TGATTACGTCACGAGTACGA--------------CCCGGAGTC-----------CACCGTAGGCACCGCCTCACTGG
CCCCAATAAATCCCCCCGGTTCCCTTCCCACC---CTAG--CCCAACACGTACGCAAAGAAGCTCCTGTGTCTTTCGTTC
GCTTTTCCGCCGCCG----TGTC-TT-TTTTTGCTACTAACTAGG----GTTTCGTTTCGCCTCCC--TACTCC-GATCG
ATGGCGTCCGAGGAAGGCGAGAAGAAGATGATCATGCTTAAGAGCTCGGACGGCGAGGAATTTCAGGTCGAGGAAGCGGT
CGCCATGGAGTCTCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAATGTCATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAACCCCAAACCGGCCGACTCCG---CCGA
CGCCGATGCCAGCTCCTCCACCTCTACTGCAAACGCCGCCCCGGTTGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTAGACCTCATCCTCGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCCGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTCAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCCGAGATA----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAGAAG-ACAAA--CATC
TAGCTAGCTAGGCACCGTTT-CATTGAATTACTGC---T--TAGTATTCATC--TTTTTTTTAGACTTCGTATTATGCAA
GAAGAAACCTATCA--------------------ATT-----------ACTTCTGAAACTAAATTGTTCTTTTCTTTTGA
CAATTGGATGTTTTGATTGGTAACATCATCCTAATTAG---CTAATTTATG-TGTGTGATTTGAGATATTTTTGGCTAT-
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>chr5D_846
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-------------------------------------CCC-GAGTC-----------CACCGTAGGCACCGTCTCCACGG
CCCCAATAAATATCCCTGGTTCCC----CACG---CCCTAGCC---CACGCACGCAAAGAAGCCCCTGTGTCTTTTGTTC
GCTCCTCCGCCGCCG----CGTC-TT-GTTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCCTCC-GACCG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTGAGGAATTTCAGGTCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGCATCCCGCT-CCCCAACGTCGAC
TCCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGGCCGACTCCGGCGCCGC
CGCCGACGCCAGCTCCTCCACCTCTACTGCAGCCGCCGCCCCTGCCGAGGACCTCAAGAGCTTTGATGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGAATTGCTCGACCTTAC
TTGCCAGACA------GTTGCAGACATGATCAAGGGAAAGACTCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAAG-AG---------
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>chr7B_859
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--------------------------------------------------------------TAGGCAACGCCTCACCGG
CCCCAATAAATATCCCCGATTCCC----CACC---CTAG--GCCAACACGCAAAAAACGCTCC-----TGTCTTTCGATT
GGTCTTCCGCCGCCG----CGTC-TTCTTTG---------CTAGG----GTTTTGTTTCGCCTCCCAATCTTCT-GATCA
ATGGCGGCCGTGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTCAGGAGTTCGAGGTTGAGGAGGCGGT
TGCCATGGAGTCGCAGACCATCCGCCACATGATTGAGGATGACTGCGCCGACAACGGCATCCCGCT-CCCCAACGTCGAC
TCAAAGATCCTCTCCAAGATCATTGAGTATTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGGCTGACTCCGGTGCCGC
CGCTGACGCCAACTCCTCCACCTCTACTGCAGCCCCCGCCTCCGCCGAGGACCTCAAGAGCTTTGATGCT----GAGTTT
GTCAAGGTCGACCAGGCCACCCTTTTCGACCTCATCCTGGCTGCAAACTACCTCAACATTAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCTGACATGATCAAGGACAAGACTCCGGAGGAGATCCGCAAGATTTTTAACATTAAAAATG
ATTTCACACCTGAGGAGGAGGCGGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAGT-AGTA-------
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>chr7D_861
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----------------------------------------------------------------GGCAACGCCTCACCGG
CCCCAATAAATATCCCCGATTCCC----TACC---CTCT--GCCATCACGCAAAAAACGCGCC-----TGCCTTTCGATT
GCTCTTCCTTCGCCG----CGTCTTTCTTTG---------CTAGG----GTTTTGTTTCGCCTCCCAATCTTCT-GATCA
ATGGCGGCCGTGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCAGACGGTCAAGAGTTCGACGTCGAGGAGGCAGT
AGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGATGACTGCGCCGAGAATGACATCCCGCT-CCCCAACGTCGAC
TCAAAGATCCTCTCCAAGGTCATTGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGGCTGACTCCGGCGCCGT
CACTGACGCCAACTCCTCCACCTCCACTGCAGCCGCCGCCCCCGTCGAGGACCTCAAGAGCTTTGACGCT----GAGTTT
GTCAAGGTCGACCGGGCCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCCGACATGATCAAGGACAAGACTCCGGAGGAGATCCGCAAGATTTTTAACATCAAGAATG
ATTTCACACCCGAGGAGGAGGCGGAGGTC----CGCAAGGAGAACCAGTGGGCTTTTGAGT-GAAAGT-AGTAG--C---
-----ATCTAGGCAATGTTG-CGTTGAAGTAATGC---T---AGTATTAATCTTGTTTTTTTAGACTTCGTAT-------
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>chr7A_861
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----------------------------------------------------------------GGCAACGCCTCACCGG
CCCCAATAAAAATGCCCGGTTCCC----CACC---CTAG--CCCAACACGCAGAAAACGCTCC-----TGTCTCTAGATT
GCTCTTCCGCCGCCG----CGCC-TTCTTCG---------CTAGG----GTTTTGTTTCTTCTCCCAATCTTCT-GATCA
ATGGCGGCCGTTGAAGGCGAGAAGAAGATGGTCACGCTCAAGAGCTCGGACGGTCAGGAGTTCGACGTCGAGGAGGCGGT
AGCCATGGAGTCGCAGACCATCCGCCACATGATTGAGGATGACTGCGCTGACAACGGCATCCCGCTCCCCCAACGTCGAC
TCAAAGATCCTCTCCAAGGTCATTGAGTACTGCAAGAAGCACGTTCAGACCAGCCCCAAACCGGCTAACTCCGGCGCCGC
CGCTGACGCCAACTCCTCCACCTCTACTGCAGACGCCGCCCCCGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCATCTTCGACCTTATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCCGACATGATCAAGGACAAGACTCCAGAGAAGATTCGCAAGATTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGACGGAGATC----CGCAAGGAGAACCAGTGGGCTTTTGAGTAGAAAGT-ACTAG--C---
-----ATCGAGGCAATGTTG-CGTTGATGTTATGC---TAGTATTAATCTTG--TTTTTTTTAGACTTGTAT--------
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>chr2D_931
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----------------------------------------------------------------------TCTTTCGTTC
GCTCTTCCGCCGCCG----TGTCTTC--TTG---------CTAGG----GTTTCGTTTCGCCTCCCAATCCTCC-GATCG
ATGGGGGCCGAGGAAGGCGAGAAGAAGATGATCACGCTCAAGAGCTCGGACGGTGAGGAATTTCCGGTTGAGGAGGCGGT
CGCCATGGAGTCGCAGACAATCCGCCACACGATCGAGGACGACTGCACCGACAACAACATCCCATT-CCCCAATGTCGAC
TCCAAGTTCCTCTCCAAGGTCATCGAGTACTACAAGAAACACGTCTAGGCCAGCCCCAAACCGGCCGACTCCGGCGCCGC
CGCTGACGCCAGCTCGTCCACCTCTACTGCAGCCGCCGCCCCCGCAGAGGACCTCAAGAGCTTTGACGCC----AAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTCGACCACATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCTAATT------GTTGTAGACATGATCAAGGGAAAGACT-CGGAGGAGATCCGCAAGACTTTCAACATCAAGAATG
ACTTCACGCCCGAGGAGGAGGCGAAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAGAAG-AGAAG--CAT-
---CTAGCTAGGCAATGTTT-CATTGAATTACTGC---T--TAGTATTGGTC--TTTCTTTTAGACTTCGTATTATGCAA
GAAGAAATCTATCATGG-------------------TCAGTTGTCATTACTTGTGAAACTGAATT-----------TTAT
CAAGTGGATGTTTTGATTGGTAACATCATCCT---TAG---CTGATTTATG-CGTGTGATTTGAGATATTTTTGGCT---
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>chr3D_934
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-------------------------------------------------------------------------TTCGCTC
GCTCTTCCGCCGCCG----CGTCTTC--TCG---------CTGGTACGCGTTTCGTTTCGCCTCCCAATCCTCC-CATCG
ATGGCGGCCGAGGCAGGCGTGAAGAAGATGATCCTGCTCAAGAGCTCGAATGGCGAGGGTTTTCAGGTCGAGGAGGCGGT
CGCCATAGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGGATCCCGCT-TCCCAACGTCGAC
TCCAAGATCCTCGCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCCCCAATCCGGCTGACTCTAG---CGC
TGCCGACGCAAACTCCTCCACCTCTA------CCGCCGCCGCCGCCGAGGACCTCAAGAGCTTTGACGCG----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCTGCCAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGTCAGACT------GTTGCAGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACTTTTAACATCAAAAATG
ACTTCACACCCGAGGAGGAGGCGGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAAT-AGTAG--CAT-
---CGA--GGCAATG---TT-CGTTGAAGTAATG----------------------------------------------
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>chr3B_968
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------------------------------------------AGG----GTTTCGTTTCGCCTCCCAATACTCC-GATCA
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCATGCTCAAGAGCTCGGACAGCGAGGAATTTCTTGTCGAGGAGGCGGT
TGCCATGGAGTCTCAAACCATCTGCCACATGATCGAGGACGACTGCACCGACAATGGCATCCCGCT-TCCCAACATTGAC
TGCAAGATCCTCTCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAACCCCAAACCGGCCGACTT---CGCCGC
CACCGACGCCAGCTCCTCCACCTCTAATGCAGCCACCGCCCCCGCCAAGGACCTCAAGAGCTTTGACACCAATAGAGTTC
GTCAAAGTCGACCAGGCCACTCTCTTCGACCTCATCCTCGCTGCACACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAAACT------GTTGCCGACATGATCAAGGGAAAGACCCCCGAGGAGATCTGCAAGACTTTCAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCCGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAGAAG-ACAAG--CATA
TAGCTAG-------------------------------------------------------------------------
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>chr3B_999
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------------------------------------------------------------------------------CG
ATGGCGGCCGAGGAAGGCGAGAAGAAGATGATCCTGCTCAAGAGCTCGGATGGCTAGGGTTTTCAGGTCGAGGAGGCGGT
CGCCATGGAGTCGCAGACCATCCGCCACATGATCGAGGACGACTGCGCCGACAACGGGATCCCGCT-TCCCAACGTCGAC
TCCAAGATCCTCGCCAAGGTCATCGAGTACTGCAAGAAGCACGTCCAGGCCAGCACCAATCCGGCTGACTCTGGCGCCGC
CG---ACGCAAACTCCTCCACCTCT---------ACTGCCCCCGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTCGACCAGGCCACCCTCTTTGACTTCATCCTGGCTGCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCAGACATGATCAAGGGCAAGACCCCGGAGGAGATCCGCAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGGAGATC----CGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAAAT-AGTAG--CAT-
---CGA--GGCAATG---TTGCCTTGAAGTAATGCTAGT---AGTATTAATCTTGTTTTTTTAGACTTCGTAT-------
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>chr2A_1116
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-------------------------------------------TGCGCCGACAACGGCATCCCGCT-CCCCAAAGTCGAC
TCCAAGATCCTCCCAAAGGTAATCGAGTATTGCAAGAAGCACGTCCAGGCCAGCCCCAAACCGGCCGAATCCGGCGCTGC
CGCCGACGCCAGCTCCTCCACCTCTACTACAGCCACCG-CCCCGCCGAGGACCTCAAGAGCTTTGACGCC----GAGTTC
GTCAAGGTTGACCAGGCCACCCTCTTCGACATCATCCTGGCTTCAAACTACCTCAACATCAAGGGATTGCTCGACCTTAC
TTGCCAGACT------GTTGCAGAAATGATCAAGGACAAGATTCTAGAGGAGATCCGAAAGACTTTTAACATCAAGAATG
ACTTCACACCCGAGGAGGAGGCGGAGATCTGCACGCAGGGAGAACCAGTGGGCTTT-GAGTAGAGTAG-AGAAG--CAT-
---CTA--GCGGCATTGTTT-CGTTGAATTACTGC---T--TAGTATTCGTC--TTTCTTTTAGACTTTGTATTATGCAA
GAAGAAACCTATCGTGGTCAGTTG--------TCATT-----------ACTTGTGAAACTGAATTGTTA------TTTGT
CAAGTGGATGTTTTGATTGGTAACATCATCCT---TGG---CTGATTTATG-CGTGTGATTTGAGATATTTTGGGCTAT-
--------------------------------------------------------------------------------
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>SNPs
--S---S----SS----S------------S-------------------------------------------------
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---S----------------------------------------------------------------------------
---------------------S---S------------------------------------------------------
---------------------------SSS-------------------------------S------------------
------S-------------------S---------------------S-----------S-------------------
----------------------------SS-------------S-------S----------------------------
--S------------------------------S---------------------S------------------------
---S-S----------SS-------------------------S-----------------S-----------S------
-S-----S------------S---------------------S----------------SS----S--------------
-------S-----S---------------------S------------------------------------------S-
--------------------------------------------------------------------------------
-----------------------------S--------------S------S----------------------------
-------------------S---------------------------------------------------------S--
------S----------------------------S--------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-------------------------------------------------S------
----------------------------------S-----------S-----S-----S---------------------
-------------------S--S-S-------------------------------------------------------
--------------------------------------------------S----------------------------S
-SS--------S---------------S---S---S------------S-SSSSSSSSSSSSSS---S--------S---
--------------SS---------SS--------S-S----------SS-SS-SS--S----------------S----
----------S----------S---S-----------------S---------S---------S-S--------------
---S--S----SS--S--S---------S---------S---S--------S----------------------------
---------S--------------------S-S-------------------------S--------S---S--------
---S--S----------------------------------------S-S--------S--S------------------
----------SSS-------S-----S------------S-S----------S---------------------S-----
--S---S-----------S--S-----------------S------------------------SSS-------------
----------S--------------S-------------------------------S----------S-------S---
---------------------S--------------------------SS---S------S----S---------S----
-------SSS
>forward_667
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-------CTTTCAGCAGGAACAGGGCT-----------------------------------------------------
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>reverse_2316
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GTTTT
CACCCACCCTGGTCT-----------------------------------------------------------------
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----------
