>input_sequence_77725
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-----------------------------------------------------------AGACACAA----CCACA--AC
AAAATCATCACTCCACGAGCAGA----CAGGACT-----GGGAAGAGCTTTGCTCCAC-A-GT-------TTAGGACCAA
CCAACGATGAAGAGCAGCACGCTGGTGGCGATCCTA---GTCCTCCAGGCCGTCATGGTCATGGGGATCCTCTCACACTC
ACTGGCCGC------GGACG----GTACG---TACGTTGT----------------------------------------
-------------ACATCTGACTGCATCTTTGT----GATGGCGTTAAGATCTTAGCC-------T--------ACATAC
ACGTG--ATAATTAACCGATGGCGGTGATAGATT-------------CATCTGATTTCAAGCGTG-T------GTGCAGA
CAATTTCCCGAAGTGCTGCGACAACTGCAACTCCTGGTCAGGGGCCCAATTCTGTGACGACGTGGGCCCCAAGTGCCGCG
ACGGCTGCGTGAACTGCCACGTGGTGCAGACGAGGCCC--GTGAAGACGTTCCG-----GTGTGGGGATGGACGCGCCGC
CCTCCCAGAGAA-T-----------CCCTGCCCGCCGCCGTGCAAAAAGAACTGATCGCTCGCTCCAACGAGA-------
-----------------TGAGCAGAAAATAAA------------------------------------------------
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>chr5D_1_TraesCS5D01G479200
TAGATAATAAGTAATTGGTATATCATGCATTGTATTTTCGTTCATT--TCTGTTAAGTGGCAAGATGACATTATTAACAA
ATATAATGAGAAAAGAAAACTCATGCACACTGGTAAAAATAAAA-TAGCGCGACAAAGCACACTTTGTTCCTAATTTATG
ATATACCCAATAATAGTTATGAGAAAATGGGTGCATGCACGGTGCATAGAAGATGGAGAACTGGAGATGTATGCCTGACA
AGTCCAAGCTAGGGAAAGGACACAAGACCAAGGTATGCGAGAAATCAAAGAAGTTCATCCCAAACAACTATCCACCAAGA
CTGTATCTGGCCGATTCCATTCCGACGGCGCGTGCAAGACTGTTTGGGGGAGAAGGTCTCTGAAACTCCATCCTTTGTGA
TCCTGCATGGGAAGAAGAGCGATAAGGTTTATGGGAAGCGTCTC-----GGCGCGACTACTCGCTACTGTTTTCCTATGT
CCACGACTTCGACTACTTCCTCAACCTCCCCACCGACGATATGGGTGACAAC---ATCAACATGTCAAACAAGAAGGCTG
TTGAAGCCTCTACCGCCACAACTTTGTCCTTTTCAACTTTAGGGTA-----TGATCTATCCATCCCTCTCTTATCCGTTC
ATGTGTTAGCCATAC------TT---------------------------------GTTATCATAGATATTTGTG-TTCT
ATACTTAGTACGCGCTCACATGTTTAGCCCTCAGTGTGAGATTAATATTCTCAGCGATGTCATCATGGTATATTTGCAAA
GT-AAATTAAACAAAAAGTTATAATATATGAAATACTAATAATTATGAGAAAATAAATAGG-------------------
--------GCGTGCACTGGACGTGGAAGATGGAGAATTGGAGATGTATGCCTAACAGGTCCAAGCCAGGGAAAGGCCAAG
C------TAAGCCAGGAGTCAAACGGGTTTATCCCAAACACATATCCACGAG------GATAACAACTGATATATGACGC
AGAAAATTGGCATGATACATCGATTCTATATATAGAGAC---TGCTTGTAGCTTTGGCCAGACACAA----CCACA--AC
AAAATCATCACTCCACGAGCAGA----CAGGACT-----GGGAAGAGCTTTGCTCCAC-A-GT-------TTAGGACCAA
CCAACGATGAAGAGCAGCACGCTGGTGGCGATCCTA---GTCCTCCAGGCCGTCATGGTCATGGGGATCCTCTCACACTC
ACTGGCCGC------GGACG----GTACG---TACGTTGT----------------------------------------
-------------ACATCTGACTGCATCTTTGT----GATGGCGTTAAGATCTTAGCC-------T--------ACATAC
ACGTG--ATAATTAACCGATGGCGGTGATAGATT-------------CATCTGATTTCAAGCGTG-T------GTGCAGA
CAATTTCCCGAAGTGCTGCGACAACTGCAACTCCTGGTCAGGGGCCCAATTCTGTGACGACGTGGGCCCCAAGTGCCGCG
ACGGCTGCGTGAACTGCCACGTGGTGCAGACGAGGCCC--GTGAAGACGTTCCG-----GTGTGGGGATGGACGCGCCGC
CCTCCCAGAGAA-T-----------CCCTGCCCGCCGCCGTGCAAAAAGAACTGATCGCTCGCTCCAACGAGA-------
-----------------TGAGCAGAAAATAAATAAG--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAAGCTCCGACGAGATGAGCAGAACCGGCCGGTGT
GGTGTACATGCAC-----GTGGCCCACGCCCAGCAACACTTGAGAG-----------------------------ATAGT
TGATGTTGCTCCGTAAA---TAAACACGTGTATC----------------------------------------------
----------------------------------------AGTTTATATATGCGTCTCTGCTCAATCAAATAAACAGTCA
GTTTGTTTGTACGATACATTTGTACTGTCCAGTTCACCGGGGAACGGATCCTTCTCGATGCTCAAGC--ATATGTACGGT
TGTCACACGCGGTGCAAGTTGGAATAGTAAGG-TAAAGGGTGTGGCTAGGTCACAGTCGACTGGGATTGAATCAATTCTC
AGTCAAGTGACATAGTATATAAGAAGAAAAAAGGAAAGCTAAAAAGAAAATTTTGCACGGTTCTTCATGTAAGATCAACA
AATATAGCATTAACTGAGACGTAATCAAGTCTCAGTCGACTGAGACTTAGCAAAATAAGATAAACTCCAGCTTTAAATCA
AAAGATACACACAACTGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------ATATATTTTTCAAATTATATTATTAATTTAAAAATAATATCATCTTTGAAAAGGAAGATCAGATCTAC
TACTGTAAAACAGGCTACCAGTGACAGGTGCAAAACATGTATC-------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGTAACCTGCCATCGATAATA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAGTTTCGAACTGCAGGCGGCCGC
CACTAGTGAAAGACCCTGGC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------ACTGGCAAGCAAGCCACCGATAGC
GTTGCTCGGTTAAAAGAAAATAACGTTGCCCCTGTGTTTAGCTTTTTTTCTTTGCGAAAAATAGTGGGTATTTATTCCTC
TGAAATAGTATTACTCCTAATACAAAAGTTTGCACTGTCTGGAACTCGGTGCAACCAACAAGCGGTGCTACCTCCATATC
TCCCTATATTAACTAGACTAGGAGCAACTCTATTCACTAGTAGAAAACAGACCTTTCGTCCTCCCCTTTAGTCCCAGTTT
GATTACGGCCCGAAACTAATGTGACCATTAGTCCCGGTTCCAACGGCTAGAACCGGCCGGGGGCACGGG
>chr5B_1
TAGATAGTAAGTTATTGGTATATCATGGATTGTATTTTCGTTCATTGGTCAATTAAGTGGCAAGCTGACATTATTAACAA
ATATAACAAGAAAAGAAAACTCATGCACACTTACCAAAATAAAAATAGCACGACAAAGCATGATTTCCTTTTAATTTATG
ATATACCAAATAATAATTATGAGAAATTAGGTGCATGCACGGGGCATGAAAGATGGAGAACTGGAGATGTATGCCTAACA
AGTCCAAGTCAGGGAAAAGACACAAGACCAAGGTATGCGAGGAATCAAACAAGTTTATCCCAAACACCTATCCACCAGGA
CCGCATCCGGCCGACTCCATCCCAACGACGCGTGCATGACTGCATGGGAGAGCAGGTGTCCGAAACCCCGCCCTTTGTGA
TCCTGCGTGAGAAGAAGAGCGATAAGGTTTCTAGGGAGCGTCTT-----GGCGCGACTACTCGCTACTGTTTGTCTACGT
CCACGACTTCGACTACTTCCTTGACCTCCCCACTGAAGACACGGGTGACCAC---ATCAAGATCTCAAACAAGAAGCCTG
CTGAACCCTATGCCGCCACAACTTTGTCCTTTTCAACTAGAGGGTATGGTATGATCTATTCATCCCTCTCTTATCCGTTC
ATGTGTTAGCCATAC------TT---------------------------------GTTATCATAAATGTTCATG-TTCT
ATGCTTAGTACATGCTCACATGTATAGCTCTTAGTGTGAGATTAATATTCTTAGCGATGTCATCATGATTTATTTGTGAA
TT-AAATTAATAAAACATAAAT-ATATATTAAATACTAGTAATTGTGAGAAAATA-------------------------
-----GGTGCATGCACTGGACGTGGAAGATGGAGAATTGGAGATGTATGCCTAACAGGTCCAAGCCAGGGAAAGGCCAAG
C------TAAGCCAGGAGTCAAACGGGTTTATCCCAAACACATATCCACGAG------GATAACAATTGATATATGACGC
AGAAAATCGGCATGATACATCGATTCTATATATAAAGAC---TGCTTGTAGCTTCGGCCAGACACAA----CCACA--AC
AAAACCATCACTCCACGAGCAGA----CAGGACT-----GGGAAGAGCTTTGCTCGAC-AAGTTCAGGAGTTAGGACCAA
CCAACGATGAAGAGCAGCACGCTGGTGGCGATCCTA---GTCCTCCAGGCCGTCATGGTCATGGGAATCCTCTCACACTC
ACTGGCCGC------CGACG----GTACG---TACGTTGCTGATCCTCATCGTCCGTCCTTGTAGT--TAATTTATCTAT
CTCGGCCGCAACAAGGTCTGACTGCATCTTTGTGATGG------------------------------------------
------------------------------------------------------------------C------GTTAAGA
CAATTTCCCGAAGTGCTGCGACAACTGCAACTCCTGGTCGGGGGCCCAATTCTGTGACGACGTGGGCCCCAAGTGCCGCG
ACGGCTGCGTGAACTGCCACGTGGTGCAGACGAGGCCC--GTGAAGACGTTCCG-----GTGTGGCGATGGACGCGCCGC
CCTCCCAGAGAA-T-----------CCCTGCCCGCCGCCGTGCAAAAAGAACTGATCGCTCGC-----TCGAGCTCACCA
CACAGGGAGATCGACGTTGCGCCGAAAATAAATAAG--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAAGCTCCGACGAGATGAGCAGAAACGGCCGGTGT
GGTGTACATGCAC-----GTGGCCCACGCCCAGCAACACTTGAGAG-----------------------------ATAGT
TGATGTTGCTCCGTAAA---TAAACACGTGTATCAGT-------------------------------------------
-----------------------------------------GTATACATATGCGTCACAGCTCAATCAAATAAAAAGTCA
GTTTGTTTGTGCGATACATTTGTACTGTCCAGTTCACCGGTGAACGGATCCTTCTCGATGCTTAAGC--ATATGTATGGT
TGTCACACGCGGTGCGAGTCGAAATAGT----------------------------------------------------
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>chr5B_1
TAGATAATAAGTTATTGGTATATCATGGATTGTATTCTGGTTCATTGGTCTATTCAATGGCAAGATGACATTATTAACAA
ATATAAGGAGAAAAGAAAACTCATGGACACTGACAAACACAAAA-TGGGGCAGCAAAGCACACTTTCCTTCTAACTTATG
ATATACCCAATAATAATTATGAGAAAATGGGTGCATGGACGGGGCATGGAAGAGGGAGAGATGGAGATATATGCCCAACA
AGTCCAAGTGACGGAAAAGACACAAGACCAGGATATGTGAGGAATCAAACAAGTTTATCCCAAACACCTATCCACCAGGA
CCTA-----------------CCGACGACGAGTGCATGACTGTTTGGGAGAGCAGGTCCCCGAAACTCCACCCTTTGTGA
TCCTGCGTGGGAAGAAGAGTGATAAGGTTACTGGGGAATGTCTCGGCGCGGCGCGACTACTCGCTATTGTTTGCCTACGT
CCACGACTTCAACTACTTCCCCGGCCTCCCCACCGACGATATGGGTGACAACAATATCAACATCTCAAACAAGAAGGCTG
TTGAAGCCTCTGCCGCCATAGTTTTGTACTTTCGAACTAGAGGGTATG-----ATCTATACATCCCTCTCTTATCCGTTC
ATGTGTTAGCCATAC------TTTTTTTTGGTGGTGATGTGTTAGCCATACTTGTTGTTATCATAGATGTTTCTTTTTCT
ATGCTTATTACGTGCTCACATGTTTAGCTCTCAGTATGCGATTAATATTCTTAGCAATGTCATCATGCTTTATATGCGAA
TCAAAATTAATCAATAAAATATA--ATATGTGAAA-TAATAGTTATGAGAAAATA-------------------------
-----GGTGCATGCACCGGACGTGGAAGATGGAGAATTGGAGATGTATGCCTAAAGGATCCAAGCCAGGGAAAGGCCAAG
C------CAAGCCAGGAGTCAGACGGGTTTATCCCAAACACATATCCACCAG------GATAACAATTGATAGATGACGC
AGAAAATTGGCATCGAAC---------ATCTATATATGGAGTTGCTTGCAGCTTTGGGCAGACACAA----CCACA--AC
AAAACCATCATTCAACGAGTAGATCGACAGGACTGGGAAGAGA-----TTTGCTCCACAA-GT-------TCAGGACCAA
CCAACGATGAAGAACAGCACGCTTGTGGCGATCCTGGTCGTCCTCCAGGCCATCATGGTCATAGGAATCCTTTCACAC--
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>chr5A_496
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-----------------------ACCTCTCCACCAAAGATATGGGTGACA-C---ATCCAGATCTCAAACAAGAAACCCG
CGGAAGCCTATGCCGCCACAGCTTTGTCCTTTTGAACTAGAGGGTATG-----ATCTAT---------------------
----GTTAGCGATACTTGTTATT---------------------------------GTTATCATAGATGTTTGTG-TTTT
ATGCTTATTACGT------ATGTCTATTTTTCAGTGTGAGATTAATATTCTTAGCGATGTCATCGTGATTTATTTGTGAA
TT-AAATTAATCAAAAAATTATA--ATATGAAATACTAATAATTATGAGAAATATGTTTTGTTTTTGAGGGAATTATGAG
AAATAGGTGCATGCACTGGA---GGAAGATGGAGAATTGGAGATGTATGCCTAACAGGTCCAAGCCAGGGGAAGGCCAAG
C------TAAGCCAGGAGTCAAACGGGTCTGTCCCAAACACATATCCACCAG------GATAACAATTGATAGATGACGC
AGAAGTTTGGCATGGAAC---------ATCCATATATAGAGTTGCTTGTGGCTTTGGCCAGACACAA----GCACA--AC
AAAACCATCACTCCACGAGCAGA----CAGGACT-----ATGAAGAGCTTTGCTCGAC-AGGT-------TTAGGACCAA
CCAACGATGAAGAGCAGCGTGCTGGTGGCGATCT---TCGTTCTCCAGGCCGTCATGGTCATGGGAATCCTCTCACACTC
ACAGGCCGC------CAACG----GTACG---TACGTTGCCGATGCTCATCGTCG----TTGCAGC--TAATATATCTGT
ACGGGCGCCAACAACGACTGACTGCATCTTTGT----GATGGCGTTAAGATCTTAGCC-------TTATAGCCTACGTAC
ATGTGATATAATTAACTGAT-GCGGTGATAGATT-------------GATCTGATTTCATGCGTG-C------GTGCAGA
CAATTTCCCGAAGTGCTGCGACCACTGCAACTCCTGGTCGGGGGCCCAATTCTGTGACGACGTGGGCCCCAAGTGCCGCG
ACGGCTGCGTCAACTGCCACGTGGTGCAGACGAGGCCCCCGTGAAGACGTTCCG-----GTGTGGGGATGGACGCGCCGC
CCTCCCAGAGAA-T-----------CCCTGCCCGCCGCCGTGCAAAAAGAATTGATCGCTCGCTCGAGTCGAGCTCACCA
GACAGTGAGATCGACGTTGCGCCGAAAATAAATAAG--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAAGCTCCGACGAGATGAGCAGAACCGGCCGGTGT
GGTGTACATGCAC-----GTGGCCCATGCCCAGCAACACTTGTGAGATAG--------------------------TAGT
TGATGTTGCTCCGTAAAAAATAAACACGTGTATCCAT-------------------------------------------
-----------------------------------------TTACATATATGCGTCTTTGCTAAATCAAATAAAAAGTCT
GTTTGTTTGTGTGATGCATTTGTACTGTCCAGTGCACCGGTGAATGGATCCTTCTCGATGCTCAAGC--ATATGTACGGT
TGTCACACGCGGTGCGAGTCGGAATAGTAATATTTTTCCAACATAAG---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------G-TAAACCCCGGCTTTCAATCA
AAAGATACATACTACTGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------ATATATTTTT-AAAATATATTATGAATTTAAAAATAATATCATCTTAAAAGAAAAGGATCAGATCTAC
AGTGACA---------ACCAGTGACAGGTGCAAAACATCTATC-------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGTAACCCGCCGGTGATAATGTACTCCCTCCGTTCCTAAATATTTA
TCTTTCTGAAAATTTCAACAAGTGACTACATATGGAGCAAAATGAGTGAATGTACACTCTAAAATATGTCTATATACATC
TGTATGTGGTAGCCATTGAAATATCTAGAAAGATAAATATTTAGGAACGGAGGGAGTAGTTACCAACTGCGGGCGGCCAC
CACTAGTGAAAGACCCTGGC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------ACTGGCAAGCAAACCACCCATAGC
GTCGCTTGGTTAAAAGAAAATAACGTTGCCCTCTGTTTATCT--------------------------------------
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---------------------------------------------------------------------
>chr5A_798
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AAATAGGTGCATGCACTGGACATGGAAGACGGAGGATTGGATATGTATGCCTAACAGGTCCAAGCCAGGGAAAGGACACT
ACAAGAATAAGCCGGGAGTCAAACACGTTTATATCCCAAACACTA--------T--TAGATAACAATTGATAGATGACGC
CGAAAATTGGCATGCT-----------ATATACGGAGACAGTTGCTTGTAGCTTTGGGCAGACACAA----CCACAGCAC
AAAACCATCATTCCACGAGCAGATCGACGGGACTGGGAAGAAAAGAGCTTCGCTCGAC-AAGTTTAGGACCA---ACCAA
CCAACGATGAAGAGTGGCACGCTGGTGGCGATCCTA---CTTCTCCAGACCGTCGTGGTCATGGGGATCCTCGCACACTC
ACAGGCCGCGGACGCGGACG----GTACGTACTACGTTGCTCATGCTTATCGTCG----TCGTTCAAATTAATTATCTGT
GCCGCGCGCTGCAACGTCTGATTCCATTCCATGGAC--------------------------------------------
------------------------------------------------------------------C------GTGCAGA
CGATTTCCCCAAGTGCTGCGACCACTGCAACTCCTGGTCGGGGGCCCAATTCTGCGACGACGTGGGCCCCAGGTGCCGCG
ACGGCTGCGTCAACTGCCGCGTGGTGCAGACGCG--CCCCGTGAAGACGTTCCGTTCCGGTGTGGAGATGGACGCTCCGC
CTTCCCGTAC-ATT-----------CCCTGCCCGCCGCCGTGCAAAAACAACTGATCGCTCCAC---------CTCATCA
CACGGTGAGATCGATGTCGGGCCGGAAAATACTCCCTCCATTCCTAAATATTTGTCTTTCTAGACATTTTAAATGACTAC
TATATACGAATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTTCGTATGTAGTTACTTGTTGAAATGCC
TAGAAAGACAAGTATTTAGAAACGGAGGGAGTATAAAATAAAATAAAGGCTCCGATGAGACGCGCAGAGCCGTTGTGGTT
TTTTTTTGAGCCGTTGTGGTTGTACACGCCCAGCAGCAACTGTCGGCGTTCTCTCTACTTTGAGAGATACAGTATATAGT
TGATGTTGCTCCGTAATAAATAAATAAATAAATAACCTTTGTAAAACCTGGTTCCGTGCCCCGCTGGTAGGCTCGGAATT
AGTTGAGACTGTTTAATAAATTACAGTGATTCAAAAAAAAAGTTTATATATGA-TCTCTGCTCAATCAAATGAAAA-TCA
GTTTATTTGTGCGATATATTTGTACTGTCCAATACAACGGTGAACGGATCCTCCTGGGTGGGCAAGCATATATGTAGAGT
TGTCACACTCGGTGCGAGTCGGCATAATTATG-TTTTCCAACATAAG---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GATAAACTCCGGCTTTGCATCA
AAGATACACAACGGACATTGGTAGTCCAGTGTAGCGATGGACGGATCCTTCTCGGTGGACGACGGTTCATGGCACGCAAG
AGCTAGGATACGCGGATTTTGGGCCACATGATTGCGTCGTGATCCGTAAAGTGGATTGGTTGTGTGCTTACAGCTTAATC
CCGTGCGAATTCCTGCACGATACAGGTTTTGGCAGAGACATCACGGTTCACCCACCACACCTCTCATGCTTTTTCTCTTA
ACTTCACAATTATAAGCCAATGTATCTTTTGGATAAAAAATCCAACTTGTATTTTGTTTGCACATTCGTGTTAGTTGTTT
CCAGGAATTTGGGAGAAGGCCACTCTTCAACATGTTTGGACAAGTTTTTGAAACTTCATCAAGTTTCAACTACTGAAACT
TGATAAGAACGAATGATAAATTCCCTCTCATTCACCACGTTTCAAAACTTCAACTAAAACACAAAATTTAAACCCTAAGG
CCTAATTTGGCAATATAGTTTTCTCAAAACTGCAGTAATCTAACTTAAGTATTCAATTGCCTAGGCAACGAATATTCAGT
TTCTAAAAACCATATTTTTTTCTTCTTCAGTCTAGCAAAAAGTGGTCAAGATTTGTTAAATACCACAAAAAACCATGGTA
TTGGAGATACCACAGTTTATAAAACTATGGTATTTGTTGAAGCCAAACACCTCAAAGTTTTGAAAACTATGGTTTGTGAT
AAAACCATAGTATTATCAAAATACATCAAAAAAAACTGAGCTGCCAAACACAACC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAGTTTCTAAAACTAAAACTTAAA
ACCTAGAACCATAAAAGCAATGAAACTCGGTAAAAAAAAACTTAATATTATCACTCCCAAGTTTGAATATGTAAACCTTG
GATTTTTTTTTAGAACTTGTTATAATATACTCGAGATTGGTCTTATTAGAAAGTTCGCGTCACAACAAACACAAATATGC
AAATGGAACTTAATTTGGACTTTTGGTTCAAAAGATAAAAGAGATCATGGGAGGTGTGGTGGATGGTGCGATGACGGATG
ATGTTGAGGTGCCTGCTGCTGGTTTCCTTTGTTGGTCCTCATGGATGTATGTATGTAGTAGCTGAGCCGTGCAAAAGAGT
CTGGTTTATGTATGTGGCAAGTGGAGGATTAGTCATGAATTGTGTACAGTAAAGGCGGGCTTGACGCTAAGGCGTTGGCC
ATGATGGGGTATGAGTTGAGTTCGCTCGTTATCCATCATTGTTTTTCGTTGTACTCTTGTTCTGTGTTTTGATCTGTCAC
TGGAAGCAGCCGTCTGGGAGTCCATCTCTGTGGGCTGTCGTGATAATTCACCGGGAGTCATCTCTATGGACTGTCGTGGT
AACACACTGAACACTGGTAGTCCATCTCTGTGGACTCGTGATAATTCACTGGTAGCCCATCTCTGTGGACTGTCGAGGTA
ATTCACCGGAAGCAGCTGTCTGGGAGTCCATCTCTGTGGTCTTGTAGTGTCCTGATGCCTAACAGGTCCAAGCTAAGCCG
GGAGTCAAACAAGTTTATCCCAAACACCTATCCACCATTGATAGATGACGCAGAAAATTGGCAAGCCATATATAGAGAGA
GTTGCTTGTAGCTTTGGCCAGACACAAGCACAGCACAAAACCATCATCCCACGAGCAGATCGACAGGAGTGGGAAGAGCA
AGTTTAGGACCAACCAAGGATGAAGAGCAGCACGCTGGTGGCGATCCTAATCCTCCACACCATGACGGTCATGGGAACCT
CTCACAGGCCGCCGCTAACGGTACGTACGTT-------------------------------------------------
---------------------------------------------------------------------
>chr5D_868
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------AAGACCAAG
C------TAAGCCGGGAGTCAAACAAGTTTTTCCCAGACACCTATCCACCTACTCCTAGATAACAATTGATAGATGACGC
CGAAAACTGGCATGCTA---------TATATATAGAGAGAGTTGCTTGTAGCTTTGGCCAGACACACACTAGCACA--AC
AAAACCATCATTCCACGAGCAGATCGACAGGACTGGGAGAG--------------CACAA-GT-------TTAGGACCAA
CCAACGATGAAGAGCAGCACGCTGGTGGCGATCCTG---GTCCTCCAGACCGTCATGGTCATGGGGATCCTCTCACAGGC
C---GCCGC------CAAAG----GTACG---TACGTTCCAGTATATAT--------------------------TCTGT
CCCGGCCGCAACAACGTCTGATTGCATCTTTGTGATCGATGGCGTTGAGATCTTAGCTTATGCTGT--------ACATAC
ATGTG--ATAATTAGCTGATGCGAATCCAGTTAGCATGCAAGACTGAGATTTGATTACATGCGGTTC------GTGCAGA
CAATTTCCCCAAGTGCTGCGACAACTGCAACTCCTGGTCGGGGTACCAATTCTGTGAGGACGTCGGCCCCAGGTGCCGCC
GCGGCTGCGCCAACTGCCAGGTGGTGCAGATGAG--CCCCGTGAAGACGTTCCG-----GTGTGGAGATGGACGCCCCGT
CTATGACGGGCACGACACGCCCACGCCCTGCCCGCCGCCGTGCAAAAAGCACTGATCGCTCCAGCTCC------------
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>chr5B_897
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------GTTTATCTCAAACACCTATCCACCTAGT--TAGATAACAATTGAGAGATGAC--
CGAAAATTGGCATGCC-------------ATATATAGAGAGTTGCTTGTAGCTTTGGGCAGACACAA---AGCACA--AC
AAAACCATCATTCCACGAGCAGATCGACAGGACTGGGAAGGCAAGAGCTTCGCTCGAC-AAGTTTAGGACCA---ACCAA
CCAACGATGAAGAGCAGCACGCTGGTGGCGATCCTA---GTCCTCCAGACCGTCATGGTCATGGGAATCCTCTCACAGGC
C---GCCGC------CAAAGGTATGTACG---TACGTTCCAGTAT------------------------------TCTGT
CCCGGCCGCAACAACGTCTAATTGCATGTTTGTGATCGATGGCGTTGAGATCTTAGCTCATAA-GT--------ACGTAC
ATGTG--ATAATTAGCTGATGCGAATCCAGTTAGCATGCAAGATTGAGATTTGATTACATGCGGATGCGGTTGGTGCAGA
TAATTTCCCCAAGTGCTGCGACAACTGCAACTCCTGGTCGGGGTACCAGTTCTGTGACGACGTCGGCCCCAGGTGCCGCC
GCGGCTGCGCCAACTGCCAGGTGGTGCAGACGAG--CCCCGTGAAGACGATCCG-----GTGCGGAGATGGACGCCCCGT
CTTCGACGGGCGCGACACGCCCACGCCCTGCCCGCCGCCGTGCAAAAAGCACTGATCGCTCCAGCTCC------------
--------------------------------------------------------------------------------
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>chr5B_970
--------------------------------------------------------------------------------
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-------------------------CTATATATAGAGGGAGTTGCTTGTAGCTTTGGGCAGACACAA----CCACGACAC
AAGACCATCATTCCACGAGCAGATCGACAGGGCCGGGAAGAG---------------C-AAGTTTAGGAGCA---ACCAA
CCAAGGATGAAGAGTAGCACGCTGGTGGCGATCCTG---GTCCTCCAGGCCGTCATGGTCATGGGGATCCTCGCACACTC
ACAGGCAGCGGACACGGACG----GTACGTACTACGTTGCTGATGCTTATCGTCG----TCGTTCCAATTACTCATCTGT
CCCGCGCGCAGCAACGTCTGATTCCATTCCGTCGAC--------------------------------------------
------------------------------------------------------------------C------GTGCAGA
CGATTTCCCCAAGTGCTGCGACCACTGCAACTCCTGGTCGGGGGCCCAGTTCTGCGACGACGTCGGCCCCAAGTGCCGCG
ACGGCTGCGTCAACTGCCGCGTGGTGCAGACCCG--CCCCGTGAAGACATTCCG-----GTGTGGAGATGGACGCTCCGC
CTACCCATAC-A-T-----------CCCTGCCCGCCGCCGTGCAAAAAGAACTGATCGCTC-------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>SNPs
------------S--------------S-----------------------S----------------------------
------S-------------------------SS--------------------------------SS-S----------
---------------S--------------------------S----S----------------------------S---
--------SS-------S-----------------------S-------S-----S----------S----------S--
-S-S---S------S-----S------S--------S-----------S---S-------S---------S---------
------S-----------------------S----S------------------------------------S----S--
----------------------S----------------------------------------S----------------
-----------S--------------------------SS-------------------S--------------------
--------------------------------------------------------------------S-----------
--S---------S---------------S----------------------S---------------S-S-------S--
S---------S------S-------------------------------------SS-SS--------------------
----------S---------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
---------------S----------------------------------------------------------------
-S--------------S------------------------------S-----------S------S-------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-SSSSSS-------
-------------------S--S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------S-----------------------------S---------------------------------------
---------------S---S----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-----S-----
---------S--S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------------SS-----S--------------
-S--SS---S--SSS-----------------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------SS------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S--------------S-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------S------------------------SSSSS--S-S-S-SS-SS-SSSSSS-S-SSS-SS--SSSSSS-SSSSSS
S-SSSSS-SSSS--SSSSS--SS-S-SSSSSS-S---SSS-SS-SS-SSSS-SS---SSSSSS-SS-S-SSSSSS-SSSS
SS-SS-SSSSSS-SSS-SSS-S-SSS--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_373
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GCAAGACTGTTTGGGGGAGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_2359
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GGTGTGGCTAGGTCACAGTC----------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
