>input_sequence_77720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGCGGCCTCCCCGTGGGCGCTCATCCTCCTCCTGGCCG
CGGCCTTCGCCGCAGGGACCGGCGCGACGACCTTCTCCATCACGAACCGCTGCTCCTACGCAGTTTGGCTGGCGGCCATC
CCGGTGGGCGGCGGCAGGCGGCTCAACAGCGGTGACACGTGGAACCTCGAGGTCCCCGGCGGCACCAGCGCCGCCCGGAT
CTGGGGCCGCACAGGCTGCAACTTCAACGGCGATAGAGGGAGCTGCGCCACCGGCGACTGCGCTGGCGCGTTGCACTGTG
GCCTGTCTGGCCGCCCGCCGGCGACACTTGCGGAGTTCAGCCTCGGCTCGCAG---GACTACTACGACATTTCGGTGATC
GACGGGTATAACGTCCCCATGGACTTCTCCTGCAGCACCGGCGTGGCGCTCCGGTGCCGGGACGCCGGCTGCTATGATGC
GTACCATCAGCCCAACGACATCAGGACCAAATCTTGCGGCGGTGGCAACAGGAGCTTCCGTGTTGTCTTCTGCCCATGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr5A_1_TraesCS5A01G018300
CTAGTAGCACTGGGCCGTCCAGCGCCTCAAGGGCCTCGTCATCATCTCGTCCTCCTCGTCCGACAACCACGGCTCCTCGT
CCAGCGAATCAGACGATCCTCCACTAGCCGCCGACAGCTAGAGCTACGCTGGCGACTAGAGGGGGAAAGGGCCGGCCCGG
AAGTGGTGAAGTTCAAATTCATTTCATGTTTTAGATGTAGTATAAAGTTGTCCTTCGTTTATGTGAACTTTGATGGACCT
TTGAACAGTCGTTCGTGATCTTTTGGTGAACTATTGTGCTATCCTATATCTGATTCTATATCCAATCAGCTGGTCTACGT
AGTTTGATCAACGTTGCATGATTTAGTATGGATATAGAGGTTCGGGTATGAGGTACACGGATGTGGACGACGCGATTTGA
GGAGTGTGCGGTCATTGTCCGCGGACGCGCCCGGATGCGCCCGCGGACGTTTGAGGGGGTGGATTTGTCATGTCCGACTG
TAGATACTGTTAATAACTCCATTCAGTAGTGAACATCAGACAATTTTTTTTTGCCGGGTGAACATCAGACATTTCGTGAG
CTGCCATATGTTTAGTGGCATAAGCTTGGCTAGTGGTCTGAAACCAAACCCACCACATTGTACGTATAATATCGTTGGTG
CTCACTAAAGCAGACACTGCAATACATGGATAGATGGACAAACATATTTTTTTTAAGATACATGGATAAACATGTACTAG
ACTTATTTGGACGTCCCTGTCAAATACACACTCCTTTTCTAGGCCGAGATCACTAGCTAGCTAGCAACCGTTGCAAACTT
TTTCCAACCATTCTCGCACGGCGATAAAGCTCAAAGATACCGTCGCTCTCGGCGTGGCGGCAAATTTTCCAAAGCAGAAT
GTTCACTTTTCTCTCTAGTTCTCTTCACCCCGGTCATCTATAAATAGGCACGTAATAGCTAGACAAGTACAACAAGCAGC
GACACTAACTATCGTAGTGATACATCCATCAAACAAAATAATGGCGGCCTCCCCGTGGGCGCTCATCCTCCTCCTGGCCG
CGGCCTTCGCCGCAGGGACCGGCGCGACGACCTTCTCCATCACGAACCGCTGCTCCTACGCAGTTTGGCTGGCGGCCATC
CCGGTGGGCGGCGGCAGGCGGCTCAACAGCGGTGACACGTGGAACCTCGAGGTCCCCGGCGGCACCAGCGCCGCCCGGAT
CTGGGGCCGCACAGGCTGCAACTTCAACGGCGATAGAGGGAGCTGCGCCACCGGCGACTGCGCTGGCGCGTTGCACTGTG
GCCTGTCTGGCCGCCCGCCGGCGACACTTGCGGAGTTCAGCCTCGGCTCGCAG---GACTACTACGACATTTCGGTGATC
GACGGGTATAACGTCCCCATGGACTTCTCCTGCAGCACCGGCGTGGCGCTCCGGTGCCGGGACGCCGGCTGCTATGATGC
GTACCATCAGCCCAACGACATCAGGACCAAATCTTGCGGCGGTGGCAACAGGAGCTTCCGTGTTGTCTTCTGCCCATGAT
GATGACTTACCATGCATATGCATGACGCGTACGAGATGCATGCATGTATGGCATGTATGGGCTCACGTATATGTACACGA
AGTGTAAGTGTGTCACGATCGAGCGAGACACAAGCACATTAAATAAAATGTTGAATAAAGGTAAGGTAAAGAATTTGAGG
AACTCCAACACAGGGACCCAAACGAACATGGATTTTGTCTGTTTATTGTTCGTTTAGGTCGGCTGTTCGCCTAACAGACA
TGCCTCTCACAAGCGCGGCTGGTAGATGTACCCAACGCGCAAAACATACAACGGACAAGTAAAGAGGCGAAATCAAGTGA
CGAGTCAAAGAAAGACAGCGGCGAGGGCGCAGCGGCCGAGCCCAATGCAAAGGGCACCGAGCCCATGAGTGTCCTAGTAC
GCGCCGCGGCCGGTGATCTCCCCACCGCCCCCTACAGTTCCCCGAGTTCTCCCCGTCGCCGGAGATCTCCCCTTCCATGG
GTGGCGGCGCG-TGTTGAAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATATTTTTTTTCATGATAATCG
TTTATTGTCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGTCTTTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCTTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATATGATGGACAAGATCCAATTCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-CATTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGACAGGTATC
>chr5A_996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAACAATGGCCGTCTCCTCGTCGGCGCTCATCCTCCTCCTTGCCG
CGGCCCTCACCACGGGGGCTAGCGCCAGGAGCTTCTCCATCACGAACCGCTGCTCCTTCACTGTGTGGCCGGCGGCCACC
CCGGTGGGCGGCGGACGGCAGCTCAACAACGGCCAAACTTGGAACCTCGACATCCCCGACGGCACCAGCTCCGCCAGGAT
CTGGGGCCGCACCGGCTGCAGCTTCAACGGCAACAGCGGGAGATGCAGCACCGGCGACTGTGGCGGCGCGCTCTCCTGCA
CCCTCTCCGGCCAGCCCCCGCTGACTTTGGCGGAGTTCACCCTCGGTGGCGGCACAGACTACTACGACATCTCGGTGATC
GACGGGTACAACCTCCCCATGGACTTCTCCTGCAGCACCGGCGTCAACATCCAGTGCCGCGACTCCAGCTGCCCCGACGC
CTACCACCAGCCCAACGACGTCAGGACCAAAGCTTGCAGCGGT---AACAGGAGGTTCAGTATAGTCTTCTGCCCATGAT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1A_1988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CCTTTGATGA
GTGGGGGC----TGTTGGAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATTTCCTTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATGACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTATGCAAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTGCGGGTATCTCCGAAAGTGTATGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTAA-CGGAGAGGTATC
>chr2D_1997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GTGGTGGCGCGTTGTTGGAAATATGCCCTAGAGGCAATAATAAATTGGTTATTATTATATTTCCTTATTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTTTGCTCA
GAGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTAAACGGAGAGGTATC
>chr2A_1997
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
GTGGCTGACGG-TGTTGGAAATATGCCCTAGAGGCAATAATAATTTGGTTATTATTATATTTCCTTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTAACTAGCTCGTTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCCTAGCACAAAGATCATGTAGTTCGTATGCTAA
-AGCTTTTCTAAATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGAGAGGTATC
>chr7A_2008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------G-TGTTGGAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATTTCATTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCTTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGATCCAATCCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAGTGCTTTGGGT
GTGCCAAACATCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTAA-CGGAGAGGTATC
>chr5A_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTTGAAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTACATTTCCTTGTTCATGATAATCG
TTTATTGTCCATGCTAGAATTGTATTGATAGGGAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCATTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATTTGATGGACAAGACCCAATCCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCTGTGTGA-CGGAGAGGTATC
>chr3A_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTTGGAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATTTCCTTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCTTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCCTAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GCACCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACCGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGAGAGGTATC
>chr1A_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTTGGAAATATGCCCTAGAGGCAATAATAAATTGGTTATTATTATATTTCCTTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCTTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCATAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-AGATTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATACTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGAGAGGTATC
>chr6A_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTTGGAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATTTCCTTGTTCATGATAAACG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCCTAGCACAAAGATCGTGTAGTTCGTATGCTAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATACTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTGCACTACGGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGAGAGGTATC
>chr6A_2009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGTTGGAAATATGCCCTAGAGGCAATAATAAATTAGTTATTATTATATTTCCTTGTTCATGATAATCG
TTTATTATCCATGCTAGAATTGTATTGATAGGAAACTCAGATACATGTGTGGATACATAGACAACACCATGTCCCTAGTA
AGCCTCTAGTTGACTAGCTCGTTGATCAATAGATGGTTACGGTTTCCTGACCATGGACATTGGATGTCGTTGATAACGGG
ATCACATCATTAGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCATAGCAC-AAGATCGTGTAGTTCGTATGCTAA
-AGCTTTTCT-AATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACCGTAGGAATGCTTTGGGT
GTGCCAAACGTCACAACGTAACTGGGTGGCTATAAAGGTACACTACAGGTATCTCCGAAAGTGTCTGTTGGGTTGGCACG
AATCGAGACTGGGATTTGTCACTCCGTGTGA-CGGAGAGGTATC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------S-S----S---S------------------S----
-----S--S--S-S---S-SS----S-S--S--------------------------S-S-S--S----S--------S-
--------------SS---S--------S---SS-S--S-----------SS------S----------S-----S----
------------S-------S----------S-S--S-----S---SS------------S-SS------S-SSS---SS
S---S--S----SS--S---SS---SS-S----------S------SSSSSSS-----------------S---------
--------S---S-------------------------------SSSSS---S------S---S--S-----SSS--S--
S-----S------------S-----------S-----S-----SSS--------S---S--S-S----------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS----
------------------------------------------------------------S-SS--S-------------
--------------------------------------------------------------------------------
--S--S--------------------------------------------------------------------------
----------------------S------------------S--------------------------------------
-SSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------
>forward_399
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GATGTGGACGACGCGATTTG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATGCATGACGCGTACGAGAT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
