>input_sequence_77694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ATGGCATCCTCCCTGAGGGCATTGCTTGTTGAGGACACGGCAGTTCAACGCATGGTTGTCTCCGCGATGCTGTGCAATCA
GTTTCACTGCGAGATGACTCTGGCGAAGAACGGGAAAGAAGCTGTTGACATGTTCCTCGAGGGCAACACGTTCGACATAG
TTTTTTGTGATAGGGACATGCCCATAATGACCGGCCCGGAGGTACATAC-----TTACTTTAGCTAATTTTTC--CCATT
TCTTTCTCTTCCTTTTGT-GCTTGAACATAACATAT------TGGGTGGTCACCTCATCGACACAATGTTTCTTGTACAT
G----TTACTTGACAGGCAGTTGTGAAGATCCGTGCTATGGGAGCCACTGATGTGAAGATCGTCGGGCTGTCTGATGATG
ATAACGCCATGGAGGCGTTCATGAGTGCCGGTGCCGATGATTTTGTGCCCAAACCAGTGAGGCCTGAGACTGTCGGGCCT
ATGATTCAGGAGGTCATCAATAAGAAGCTAGAACAGTTAGCGACGCTTGCTTGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1B_1_TraesCS1B01G478600
GGGGTGTTTCGGTGCTACATGTCGCAAAAATAAGCATAAGAAAGAGTTAACTTTCTTATTTTTCTTGATCTTATTTTTTG
TCCTCGCATACAAATTATTTCTTTTCTCTGATCTTTCCATGACCGACCGGTGAAGGAAGTGGTAGACACCAATTAAGAAG
GTGGTACGTGCGTACCTCTTGCAACAGCAGCTACGTACTCTGATGATTGTATCTGTTCCTTTCTTAATTTGTTTCTTCTG
CCTCTCTCTCTTTAC---CTTTTTTTTTTTGCATCAACGATGTTACACTATTTTTAATTAATTTGGCTCCCTGGTTAAAA
GATCAAGATT-GTTAGATGCGCTGCCTAAACACACAAATAATATAATCATCAGAGTATAATTTGGATCTGTATGTATATT
GTTGCACTGGTTGTTGTCGGCATGAAGCTATGCATATGGATCTATGTAGAGACCGTATGCATGTTGTAAATTCTTTCTGT
GTGTGGAGAAATTATCCATCCAAGTAT-----GGCACAGTCTCTGCCATTGTTGCTATCGATCCAAATTAAG-------T
TTCTTTTTGGGGTTTTTCCTGTTCTTTTTGTCCTAATCTATGTAGGGGG--------AAAATCTCCATCTCTTCC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCTGATAAAGCATT
TAATAATCTACTAAGTAGTACTCCCTCCGTTTCAAAATATTTGTCTTTCTAGGCATTTCAAATAGACACAACATACGGAT
ATATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTTCGTACGTAGTCACTTGTTGAAATCTCTAGAAAGACAA
ATATTTCGGAACGCGACGAAGTAGAGACTAACTAATAAAGTGTGCGTACCTCTGATCTCAGCTTATTCTGCATGCATGCT
TGATTTTGC-AGAAGAGCTCTGTTACTGTATAT----CAGCAGCTGAGATCTATGAAACGTGTGCTTATCTTCCTATTAG
C---TAGGTGTGGATCAGAAATAACTAATCTCTTTTTC----------------TT-GCAGTTGTTTTAGCAAGCTGATA
ATGGCATCCTCCCTGAGGGCATTGCTTGTTGAGGACACGGCAGTTCAACGCATGGTTGTCTCCGCGATGCTGTGCAATCA
GTTTCACTGCGAGATGACTCTGGCGAAGAACGGGAAAGAAGCTGTTGACATGTTCCTCGAGGGCAACACGTTCGACATAG
TTTTTTGTGATAGGGACATGCCCATAATGACCGGCCCGGAGGTACATAC-----TTACTTTAGCTAATTTTTC--CCATT
TCTTTCTCTTCCTTTTGT-GCTTGAACATAACATAT------TGGGTGGTCACCTCATCGACACAATGTTTCTTGTACAT
G----TTACTTGACAGGCAGTTGTGAAGATCCGTGCTATGGGAGCCACTGATGTGAAGATCGTCGGGCTGTCTGATGATG
ATAACGCCATGGAGGCGTTCATGAGTGCCGGTGCCGATGATTTTGTGCCCAAACCAGTGAGGCCTGAGACTGTCGGGCCT
ATGATTCAGGAGGTCATCAATAAGAAGCTAGAACAGTTAGCGACGCTTGCTTGATCCAGCCATGGAGGAATACAAAC---
-AGCTAGCTCATATGCATAGCTAGCTTTTGGCATGCATTATATTTTTTTTATTACCGTTATGAGGTCATTTTAGTCCTGA
GGTCATGTTAAAGGCTGGCGGTGATTAGCAAGAAGAAGAAGAAGA---------------AGCAGAGAGGCTACCGACAT
AGTTGGGTCACTTGGATG---ATACTATCGAAATTGTAATTTGGATGATACT---GTACTAGACACCGTGCCAATGGTTG
TATTC--ACATGCATGTGGAATGTGGCCACGTGGTTCACAGTACGTA----------------------------CCTGC
TGAACTGGCTCGATGCATATAAGTATATCTTT-GGCGATCTACAAAGTTTTGGATCGAGCAAGTAGAGTAC---GTAGCT
ACGATCGACTTGATATCGCTAGGTCGCAACTTTACGT----AAGACACGCCAGCGATCGAT----CG----------TTT
CTATTCTCTCTATCACGTACACACACCGCTA--------------------------------------TACGTACTAGT
ACTCCTGTCCTATACGTATATATGAGTACACACACAAGCCAACTGGCTAGCCAAGTCTTTCCTTATTTCGTCTTCGCATA
TATCCATCTACTCCATGGGTGAGTCATGGCCATGAGACATGTCACATCGCATGTATGTCTATTTGAATCCGCCAAAACCA
AAACGGACGATCCATCTTGTCACTTCAAG--GTACGTACTGAAAAAAACGTCATTGCTTCTTATCCTTCAAAGTTCAAAC
CTCCTGTTCCTGTAAACTTGTCGAGATGAATCCTAGCAATCGTCTTCCTTGTAAGCCACGGCTTGGTTCCTATATGCTTC
CTCAAAAGCTTACATGATCATCAGAGCCCTTCCTCTCAATCGCATCTAGCCTTCTTATGAGAGAAAACCAATCTAGCCAG
GAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCATAGCCGGCACCACAACTTCCTCCGCATCCACACTCGCAACCAAC
ATGAGCGCCTTGACTACCTAGTCTTCCACTTCCATCTTTGCGCCAGCATCC
>chr1D_4
GTGTTT--TCGGTGCTACATGTCGCAAAAATAAGCATAGGAAAGAGTTAACTTTCTTATTTC-CTTGATCTTATCTTTTG
CCCTTGCATACAA---ATTTCTTTTCTCTGATCTTTCCATGACCGA----TCAAGGAAGTGGCAGACACCAACTAAGAAG
GCGGTACGTGCGTACCTCTTGCAACAGCAGTTACATACTCTCATGATTGTATCTGTTCCTTTCTTAATTTGTTTCTTCTG
CCTCTCTTTCTCTCTTTAC---TTTTTTTTGCATCAACAATGTTGCACTATTTTTAATT----TGGCTCCCTGGTTACAA
GATCGAGATTTTTTAGATGCGCTGCCTAAACACACAAATAATATATTGCTGATT-TATAATTTGGATCTGCATGCATATT
GTTGCACTGGTTGTTGTTGGCATGAAGCTATGCATATGGATCTATGTAGATACC--ATGCATGTTGCAGATTC-------
--------------------------------------------------------------------------------
------------------------TTTTTGTCCTCATCTATGCAATCTAGGGGGG-AAAAATCTCCATCTCTTCC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCTGATAAAGCATT
CAATAATCTACT--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTAGAGAATAATTAATAAAGTGTGCATACCTCTGATCTCAGCTTATTCTGCATGCATGCT
TGATTTTGC-AGAACAGTTCTGTTACTGTATAT----CAGCAGCTGAGATCTACGAAACGTGTGCTTATCTTCCTATTAG
ACAGTAGATGTGGATCAGAAATAACTAATCTCTTCATAAATTCTGTTTGT-TTTTT-GCAGTTGTTTTCGCTAGCTGATC
ATGGCATCCTCCCTCAGGGCATTGCTTGTTGAGGATACGGCAGTTCAACGCATGGTTGTCTCCGCCATGCTGCGCAATCA
GTTTCACTGCGAGACCACTCTGGCGAAGAATGGGAAAGAAGCTGTTGACATGTTCCTCGAGGGCAACACGTTCGATATAG
TCTTTTGTGATAGGGACATGCCCATAATGACCGGTCCGGAGGTACTT----ACTTTAGCTAA-------TTTTTTCCATT
TCTTTCTCTTCCTTTTTT-GCTTGAACATAACACATAC----TGCATGATCACCTCATCAACACAATATTCCGTGTACAT
GTTAATTACTTGACAGGCAGTTGTGAAGATCCGTGCTATGGGAGCCACTGATGTGAAGATCGTCGGGTTGTCGGATGACG
ATAACGCCATGGAGGCGTTCATCAGCGCCGGCGCCGATGACTTTGTGCCCAAACCAGTGAGGCCTGAGACTGTCGGGCCT
ATGATTCAGGAGGTCATCAATAAGAAGCTAGAACAGTTAGCGGCGCTTGCTTGATCCAGCCATGGAGGAATACATGCATA
AAGCTAGCTCATATGCATCA-TAGCTTTTGGCATGCACTATATT---------ACTGTCGTGTTGTCATTTTACTTTCAA
GGTCATGTTAAAGGTCGGGCGTGATTAGCAAGAAGAAGAAGAAAAAGCAGCAGCAGCAGCAGCAGAGAGGCTACCGACAT
AATTAGACCATTTGGATGATAATACTATCGAAATTGTCATTTGGATCGGATGATACTAATTGACACCGTGCCAATGGTTG
TATTATTACATGCATGTGGAATGTGGCCACGTGGTGCACAGTACGTACGTACGTACGTACGTACGTACCTACCTACCTGC
TGAATTGGCTCGATGCATAATTATATATCTTT-GTCGATCTACAAAGTTTCGGATCCAGCGAGTACAGTACGTAGTAGCT
ACGATCGACTTGATATCGCTAGCTCGCAACTTTACGT----AAGACACGCCAGCGATCGAT----CGATATCGTTTGTTT
CTATTCTCTATATCACGTACACACGCTGCACAATGCCAGCCACGTACCCCCGTCCTATATACGCACCGCTACGTACTAGT
ACTACTGTCCTATACGTATATATGAGTACACACACAAGCCAACTAGCTAGCCAAGTCTACT-------------------
-----------------------------CCATGAGACATGCCACATGCA---TATGTCTATTTGAATCCGCCAAAGCCA
AAACGGACGATCCATCTTGTCACTTCAAGTGGTACGTACCGAGAAAAACGCCATTGCTTCTTATCCT-------TCAAAC
CTCCTGTTCCTGTGAACTTCTCGAGATGAATCCTAGCAATCGTCTTCCTTGTAAGCCACGGCTTGGTTCCTATA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1A_27
--------------------------AAAATAAGCATGGGAAAGAGTTAACTTTCTTATTT-TCTTGATCTTATTTTTTG
TCCTCGCATACAA---ATTTCTTTTCTCTGATCTTTCCATGACCGG----TGAAGGAAGTGGT--ACACCAATTAAGAAG
GTGGTACGTGCGTACCTCTTGCAACAGCAGTTACGTACTCTGATGATTGTATCTGTTCCTTTCTTAATTGGTTTCTTCTG
CCTCTCTCTCTTTAC---C---TTTTTTTTGCATCGACGATGTTGCACTATTTTTAATT----TGGCTCCCTTGTCACAA
GATCGAGATT-GTTAGATGCGCTGCCTAAACACACAAATAATATATTTCTGATT-CATAATTTGGATCTGTATGTATATT
GTTGCACTGGTTGTTGTTGGCATGAAGCTATGCATATGGATCTATGTAGATACC--ATGCATGTTGCAGATTCCTTTTGT
GTGTGGAGAAATTATCCATCCAAGTATGGGGTGGCACAGTCTCTGCCATTGTTGCTATCGATCCAAATTAAGCACAACAT
TTCTTTCTGGGTTTTTTCGTGTTCTTTTTGTCCTCATCTATGTAATCTAGGGGAAAAAAAATCTCCATCTCTTCG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCTGATAAAGCATA
TAATAATCTACT--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTAGAGACTAATTAAAAAAGTGTGCATACCTCTGATCTCAGCTTATTCTGCATGCATGCT
TGATTTTGC-AGAACAGTTCTGTTACTGTATATATATCAGCAGCTGAGATCTACGAAACGTGTGCTTATCTTCCTATTAG
CTAGTAGATGTGGATCAGAAATAACTAATCTCTTCATAAATTCTGTTTGT-TTTTT-GCAGTTGTTTTAGCTAGCTGATC
ATGGCGTCCTCCCTCAGGGCATTGCTTGTTGAGGATACGGCAGTTCAACGCATGGTTGTCTCCGCCATGCTGCGCAATCA
GTTTCACTGCGAGATGACTCTGGCGAAGAATGGGAAAGAAGCTGTTGACATGTTCCTCGAGGGCAACACGTTTGATATAG
TTTTTTGTGATAGGGACATGCCCATAATGACCGGCCCGGAGGTACATACGCACTTTAGCTAA-------TTTC--CCATT
TCTTTCTCTTCCTTTTTTTGCTTGAACATAGCACATATATATTGCATGGTCACCTCATCGACTCAATATTTCTTGTACAT
GTTAATTACTTGACAGGCAGTTGTGAAGATCCGTGCTATGGGAGCCACTGATGTGAAGATCGTGGGGCTGTCTGATGATG
ATAATGCCATGGAGGCGTTCATCAGCGCCGGCGCCGATGATTTCGTGCCCAAACCAGTGAGGCCTGAGACTCTGGGGCCT
ATGATTCAGGAGGTCATCAATAAGAAGCTAGAACAGTTAGCGACGCTTGCTTGAACCAGCCATGGAGGAATACATGCATA
AAGCTAGCTCATATG---CA-TAGCTTTTGGCATGCACTATATT---------ACTGTCGTGTTGTCATTTTACTTTCAA
GATCATGTTAAAGGTCGGGCGTGATTAGCAAGAAGAAGAAGAAGA---------------AG---------TACCGACAT
AATTAGACCATTTGGATGAT-ATACTATCGAAATTGTCATTTGGATCGGATGATAGTAATTGACACCGTGCCAATGGTTG
TATTATTACATACATGCATACATT-------TGGTGCACAGTACGTACGTACGTACGTAC----------------CTGC
TGGATTGGCTCGATGCGTAATTATATATCTTTTGTCGATCAACAAAGTTTCGGATCGAGCGAGTACAGTACGT---AGCT
ACGATCGACTTGATATCGCTAGCTCGCAACTTTACGTAAGAAAGACACGCCAGCGATGGATCAACCGATATCGTTTGTTT
CTATTCTCTCTATCACGTACACACAATGCACAAGGCCAGCCACCTACTCCCGTCCTATATACGCACCGCTACGTACTAGT
ACTACTGTCCTATACGTATATATGAGTACACACACAAGCCAACTAGCTAGCCAAGTCTTTCCTTATTTCCTCTTCGCATA
TAGGA------------------------------------------GCA---TATTTCTATTTGAATCCGCCAAAGCCA
AACT-GACGATCCATCTTGTCACTTCCAA-GGTACGTACTGAGAAAAACGCCATTGCTTCTTATCCT-------TCAAAC
CTCCTGTTCCTGTGAACTTGTAGAGATGAATCCTAGCAATCGTCTTCCTTGTAAGCCACGGCTTGGTTCCTATA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1B_257
TTTTTTTG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTCTTGCATCATCGATGCTGCACTATTTTTAGTT----TGGTTCCATGCATACAA
GATCGAGATTTGTTAAAGGCGCTGCCTATACACGTGTACGGTGAAACTAGTAGTAGTGCATTTGGATC----TGTATATT
GTTGCCTTGGTTGTTATTGGCA-GAAGCCATGCATATGGATCTAG--------C--ATGCATGTTGCAGATT--TTTTGT
GTGTGGAGAAATTATCCATCCAAGTGTTGAACAATTAT-TCTCTGCCGTTGTTGTCATCGATTCAAATTAATTGTTTGTG
ATTTTC------TTGTTCATGTTCTTTTTATCCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGATAAAGGATT
CAATAA---ACT--------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTAAATACTAATTAAGGAAGTGTGCATACCTCTGATCTCAGTTTATTCTGCACGCATGCA
TGATTTTGC-AAAACAAATCTTTTACTATATAG----CAGC---TAAGATCAATGAA-C---------------------
-------ATGTGGATGAGAAATAACTAATATCTTTATAAATTA----TGT-TTTTT-CCAGTTCTTGTAGCTAGCTGATC
ATGGCATCGTCCCTCAAGGCATTGCTTGTTGATGACATGGCAGTTGAACGCATGGTTGCCTCCGCCAAGCTGCGGA---A
GTTTCATTGCGAGATCACCATGGCGAAGAATGGGAAAGAAGCTGTTGATATGTTCCTTGAGGGCAATGAGTTTGATATTG
TTGTATGCGATAAGGACATGCCCATAATGACCGGTCCTGAGGTATGTGC-----TTAGCTAA-------TTTA--CCATT
TCTTTCTCTTCCTTTTTT-GCTTGAACATAACACATAT----TGGATGGTCACCTCATTGACATAATATTTCTTGTACAT
G----TTACTTGACAGGCAGTTGAGAAGATCCGTGCTATGGGAGCCACCGATGTGAAGATCGTCGGGGTGTCTGCTGATG
ATAACGCCATGGAGGCGTTCATGAGTGCCGGCGCTGATGACTTTGTGCCTAAACCAGTGAGGCCTGAGATTCTCGAGCCT
ATGATTCAGGAGGTCATCAACAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1A_805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGTAAATACTAATTAAGAAAGTGTGCATACCTCTGATCTCAGCTTATTCTGCATGCATGCA
TGATTCTGC-AAAACAAATCTTTTACTATATAT----CAGC---CAAGATCAATGAAAC---------------------
-------ATGTGGATCAGAAATAACTAATCTCTTTATAAATTA----TGTATTTTT-GCAGTTCTTGTAGCTAGCTGACC
ATGGCATCGTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCATGGTTGCCTCCGCCATGCTGCGGA---A
GTTTCATTGCGAGATCACCATGGCGAAGAATGGGAAAGAAGCTGTTGATATGTTCCTTGAGGGCAACGAGTTTGATATTG
TTGTATGTGATAAGGACATGCCCATAATGACCGGCCCTGAGGTATATGC-----TTAGCTAA-------TTTC--CCATT
TCTTTCTCTTCCTTTTTC-GCTTGAACATAACACATAT----TGGATGATCACCTCATTGACACAATATTTCTTGTACAT
G----TTACTTGACAGGCAGTTGAGAAGATCCGTGCTATGGGAGCCATCGATGTGAAGATCGTCGGGGTGTCCGCTGATG
ATAACGCCATGGAGGCGTTCATGAGTGCCGGCGCTGATGACTTTGTGCCCAAACCAGTGAGGCCTGAGATTCTTGAACCT
ATGATTCAGGAGGTCATCAATAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1D_818
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAAAGTGTACAGACCTCTGATCTCCGCTTAATCTGCATGCATGCA
TGATTTTGC-AAAACAAATCTTTTACTATATAT----CATC---TGAGATCAATGAAAC---------------------
-------GTGTGGATCAGAAACAACTAATCTCTTTATAAATTA----TGT-TTTTTTGCAGTTCTTTTAGCTAGCTGATC
ATGACATCCTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCATGGTTGTCTCCTCCATGCTGCGCAA---
CTTCCACTGCGAGATCACCCTGGCGAAGAATGGGAAAGAAGCTGTTGATATGTTTCTTGAGGGCAACGAGTTTGATATTG
TTGTGTGTGATAAGGACATGCCCATAATGACCGGTCCCGAGGTACGT----ACTTTAGCTAA-------TTTC--CCATT
TCTTTATCTTCCTTTTTT-GCTTTGACGTAACACATAT----TGGATGGTCACCTCATCGACACAATATTTCCTGTACAT
GTTG----CTTGACAGGCCATTGTGAAGATCCGTGCTATGGGAGCCACTGATGTGAAGATCGTCGGGGTTTCCGCTGATG
ATAACGCCATGGAGGCGTTCATGGGTGCCGGTGCTGATGATTTTGTGCCCAAACCAGTGAGGCCTGAGATTCTGCAGCCT
ATGGTCCAGGAGGTCATCAACAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chrUn_818
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAAAGTGTGCATACCTCTGATCTCAGCTTAATCTGCATGCATGTA
TGATTTTACAAAAACAAATATTTTACTATATAT----CAGC---TGAGATAAATGAAAC---------------------
-------GTGTGGATCAGAAACAACTAAACTCTTTATAAATTA----TGT-TTTTTTGCAGTTCTTTTAGCTAGCTGATC
ATGGCAGCCTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCATGGTTGTCTCCTCCATGCTGCGCAA---
GTTCCATTGTGAGATCACCCTGGCGAAGAATGGGAAAGAAGCTATTGATATGTTTCTTGAGGGCAATGAGTTTGATATTG
TTGTGTGTGATAAGGACATGCCCATAATGACCGGTCCTGAGGTACAT----ACTTTAGCTAA-------TTTC--CCTTT
TCTTTATCTTCCTTTTTT-GCTTTGACATAACACATAT----TGGATGGTCACCTCATCGACAAAATATTTCTTGTACAT
G----TTACTTGACAGGCTGTTGTGAAGATCTGTGCTATGGGAGCCACAGATGTGAAGATCGGCGGGGTGTCTGCTGATG
ATAACGCCATGGAGGCGTTCATGTGTGCCGGTGCTGATGACTTTGTGCCCAAACCAGTGAGGCCTGAGATTCTGCAGCCT
ATGGTTCAGGAGGTCATCAACAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chrUn_818
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAAAGTGTGCATACCTCTGATCTCAGCTTAATCTGCATGCATGTA
TGATTTTACAAAAACAAATATTTTACTATATAT----CAGC---TGAGATAAATGAAAC---------------------
-------GTGTGGATCAGAAACAACTAAACTCTTTATAAATTA----TGT-TTTTTTGCAGTTCTTTTAGCTAGCTGATC
ATGGCAGCCTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCATGGTTGTCTCCTCCATGCTGCGCAA---
GTTCCATTGTGAGATCACCCTGGCGAAGAATGGGAAAGAAGCTATTGATATGTTTCTTGAGGGCAATGAGTTTGATATTG
TTGTGTGTGATAAGGACATGCCCATAATGACCGGTCCTGAGGTACAT----ACTTTAGCTAA-------TTTC--CCTTT
TCTTTATCTTCCTTTTTT-GCTTTGACATAACACATAT----TGGATGGTCACCTCATCGACAAAATATTTCTTGTACAT
G----TTACTTGACAGGCTGTTGTGAAGATCTGTGCTATGGGAGCCACAGATGTGAAGATCGGCGGGGTGTCTGCTGATG
ATAACGCCATGGAGGCGTTCATGTGTGCCGGTGCTGATGACTTTGTGCCCAAACCAGTGAGGCCTGAGATTCTGCAGCCT
ATGGTTCAGGAGGTCATCAACAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chrUn_818
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAAAGTGTGCATACCTCTGATCTCAGCTTAATCTGCATGCATGTA
TGATTTTACAAAAACAAATATTTTACTATATAT----CAGC---TGAGATAAATGAAAC---------------------
-------GTGTGGATCAGAAACAACTAAACTCTTTATAAATTA----TGT-TTTTTTGCAGTTCTTTTAGCTAGCTGATC
ATGGCAGCCTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCATGGTTGTCTCCTCCATGCTGCGCAA---
GTTCCATTGTGAGATCACCCTGGCGAAGAATGGGAAAGAAGCTATTGATATGTTTCTTGAGGGCAATGAGTTTGATATTG
TTGTGTGTGATAAGGACATGCCCATAATGACCGGTCCTGAGGTACAT----ACTTTAGCTAA-------TTTC--CCTTT
TCTTTATCTTCCTTTTTT-GCTTTGACATAACACATAT----TGGATGGTCACCTCATCGACAAAATATTTCTTGTACAT
G----TTACTTGACAGGCTGTTGTGAAGATCTGTGCTATGGGAGCCACAGATGTGAAGATCGGCGGGGTGTCTGCTGATG
ATAACGCCATGGAGGCGTTCATGTGTGCCGGTGCTGATGACTTTGTGCCCAAACCAGTGAGGCCTGAGATTCTGCAGCCT
ATGGTTCAGGAGGTCATCAACAAGAAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr1D_972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTTTGCAGTTCTTGTAGCTAGTTGATC
ATGGCATCGTCCCTCAAGGCATTGCTTGTTGATGATATGGCAGTTGAACGCTTGGTTGCCTCCGCCATGCTGCGGAA---
GTTTCATTGTGAGATCACCATGGCGAAGAATGGGAAAGAAGCTGTTGATATGTTCCTTGAGGGCAACGAGTTTGATATTG
TTGTATGTGATAAGGACATGCCCATAATGACCGGTCCTGAGGTATATGC-----TTAGTTAA-------TTTC--CCATT
TCTTTCTCTTCCTTTTTT-GCTTGAACATAACACATAT----TTGATG-TCACCTCATTCACCCAATATTTCTTGTACAT
G----TTACTTGACAGGCAGTTGAGAAGATCCGTGCTATGGGAGCCACCGATGTGAAGATCGTCGGGGTGTCCGCTGATG
ATAACGCCATGGAGGCGTTCATGAGTGCCGGCGCTGATGACTTTGTGCCCAAACCAGTGAGGCCTGAAATTCTCGAACCT
ATGATTCAGGAGGTCATCAATAAAAAG----AATAATTAGCGACG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>SNPs
-S-S-S-S------------------------------S----------------------S------------------
-------------SSS------------------------------SSSS------------------------------
------------------------------S-------------------------------------------------
-------------------SSS----------------------S--------------SSSS--------------S--
----S------------------------------------------S--S--SS-------------------------
-----------------S--------------------------------S---SS----------S-S----S--S---
--------------------------------------------------------------------------------
------S----S------S---------------S---------SSSSS-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS------------S-------------S----------------------------------
--------------S--S--------------------------------------------------------------
-----------------------------------S-S---------------------------------S-------S
--------------S--------------------------------------------------S------S-------
------------------------------S--------------------------------------------S----
---------------------------------------------------------S--S-SSSSSSS-----------
----------------S----------------S-----------S---------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SS----
------------------SSS----------------S------SSSSSSSSS--S--SS--SS---------S-SSSS-
--------------SS--SS------------------------------------------------------------
-S--S-SS--S--------------------------S--------SSS-SS------S-S-------------------
----S------------------------------S--------------------------------------------
----S--------------SSSS-----------S---------------S---------S----S--------------
----------------------S---------------------------------------------------------
--------------------------S--SS-------------------------------------------------
---S----------------------------------------S------------------------S----------
--SSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-----SSSSSS-----------------------S---
------------------------------------------S-------S----------------SSSSSSS------
-------------S------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_130
--------------------------------------------------------------------------------
------------------------------ATCTTTCCATGACCGACCGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CTAGACACCGTGCCAATGGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
