>input_sequence_77687
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----------------------------------------ATGGAGGAGGAGGAGAACGCCGCCGAGCTCAAGATCGGCG
AAGGTCAGCCCGTCTCTC---------------CACCCCCACTCAT--CCAC----------------------------
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-------------------------CTAGGGTTTCACCGGGGA---------------GATCCGCCCAACAAACCCTAAT
CCCCACCGCTCTAATTCTTCTTCTCTTTGCGCAGAGTTTCTCAAGGCCAAGTGCCTGATGAACTGCGAGGTGGCGATAAT
CCTGGAGCACAAGTGGGAGCAGCTGCAGCACATGTCGGACGGCGGCGCCGACCAGGTCTCGCAGGTCTTCGAGAAGTCGC
AGGCCTACGTCAAGCGCTTCAGCCGCTACAAGAACCCCGACGCCGTGCGCCAGGTCCGCGAGACGCTCTCCCGCTACAGC
CTCGTCGAGTTCGAGCTCTGCACCCTGGGGAACCTCTGCCCCGACACCGCCGACGAGGCCAAGGCGCTCGTCCCCTCCCT
CGTCCCCGGCGGCAGGTTCGACAGCGACGACCGCGTCGACAAGATGCTCAACGACCTCTCCCTCATCAAGAAGTTCGAGT
AG------------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G046500
TCGGCGTCACACATTCCGTTCGTCGAGGATGCAGGCACGGCGGAGGCTAGAGAACTCAAGGACGGGCTAATCCTCGCCAA
CAATATTGGATGCAACAAGGTGGAGATCCGAGCTGATTGTATGGAGGTGATCGAAATCATGCAACATGGAGGGAATTCCT
TGGGTCCAGCGGCAGCCATCTATGAGGAATGTACCTTCTTATGTTGTAATTTCCTTTCTGTTTCTTTCAGCCATTGCCCT
AGGGAGGCCAATATGGCGGCTGATTTACTGGCTACAAAGTCGGAGCACTCGAGAACTATTGTATGGCAGAACAAGGCTCC
GGACTTTTTGCTTGATGTACTCTCAAATGATGTAGGCCTTTTCCCACATGAAATATAAACCGCCATGGTGGCTTTTCCTA
AAAAAAAAAACATTGTACGTACTTGAAAACAAGATGAACGAATCGCTTGGGCCGCCCTTGGCATGGATGTAATTGAACAC
GGTTGTACTAATTTATTTACAGGTGTAACTTACTGTATTTCCGGCCGGAAAGCAAAACGACGGGAAACGGAGCCTTGGAT
TTGTAGATGTGTAGTTCGCAGTTGTTAAAAGAGAAAAAAAAACACGAGGGGAGGGAAGGGAAGGGCGCACCACGGGAGCT
GCCGCAACAACCTCTTCGCCGCCGGGTTCTTCTCAGCGGCAGGTCCGATGAGGCGACGAGCCGACGACGACGGGAGGCAG
AGTCAGTCGGCGTTTTAGCGGGCCCATCCGAGATGCTCGGATGATGAGAATTGAGGAACCGGTTTCCTTCCATCAGGCCC
GGCCCAGTCTTCTTCTCCGCGATGTTGTGGGATCGGATCCGCGACCCCAGGCCCAGCCCACTGATTTTACCCGACGCCGC
CTCCCTCTTTTCTTTCCCCTTCCTCTGCCCCTCCCCGCCGTCTCCTCTCCCGACGCCGAACCGAATCGCCGCACCGGCAG
CCGGAGAAGAAGAAATCGAGCGCCCGCAGCCATGTCCGGCATGGAGGAGGAGGAGAACGCCGCCGAGCTCAAGATCGGCG
AAGGTCAGCCCGTCTCTC---------------CACCCCCACTCAT--CCAC----------------------------
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-------------------------CTAGGGTTTCACCGGGGA---------------GATCCGCCCAACAAACCCTAAT
CCCCACCGCTCTAATTCTTCTTCTCTTTGCGCAGAGTTTCTCAAGGCCAAGTGCCTGATGAACTGCGAGGTGGCGATAAT
CCTGGAGCACAAGTGGGAGCAGCTGCAGCACATGTCGGACGGCGGCGCCGACCAGGTCTCGCAGGTCTTCGAGAAGTCGC
AGGCCTACGTCAAGCGCTTCAGCCGCTACAAGAACCCCGACGCCGTGCGCCAGGTCCGCGAGACGCTCTCCCGCTACAGC
CTCGTCGAGTTCGAGCTCTGCACCCTGGGGAACCTCTGCCCCGACACCGCCGACGAGGCCAAGGCGCTCGTCCCCTCCCT
CGTCCCCGGCGGCAGGTTCGACAGCGACGACCGCGTCGACAAGATGCTCAACGACCTCTCCCTCATCAAGAAGTTCGAGT
AGCCGCCT-CATAATATGCT------------------------------------------------------------
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-------------------------------------------------------CCTGCTTGTTGCTCATGTTCTTGTT
CCTCCAATGGACATGAACATGGAGATGGAGATC--------------------CATGTGTCATTTATCAGTCTCAACAAG
TACTACTAGCCACTGGTAGCTTAGTTTGGCGAT--GTTTGATCTTCAGATTATCTCCTTCTATGCTATGATCATAAGACA
TCGGTGTCAATT-TCACAGATG----------------------------------TATGGAGTTAATGAAGCCTTGCTG
CTATGCTGTCTTGGAGAAAAATGTAGTAGCTGCTGTTGTTAAGTTGGGTTGGTGCTGTTTAATCTTCTTCATATTACCCT
CCTATATGCTATCACTATAAGACAGAGTTGATTAAACA-TTGTTGA--TATCATCTTCTGATCTTGATCATCTG---AGA
ATTTGGTTACAGACTGAAAATTAGTTATCTTTTTGTCATCTCCTTGGCCTGCTTGTAGTTTGCAATCTCCAGAAGGAAAC
AGTTGTGCTCTTGCCGGTGTTTAACTGTATTATCTGGA------------------------------------------
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------------------------------------------------------------------------------TG
AATCTGAACATATGAAGGCTTCAGATCTTGTC--------ACCATCCCATCTGGAAGCAAATCACTGTCTGTAATGTACA
TACGGATCTGAACAGAAATCTCAGCATCACTGAAGAATGCAAGAAACATGAGACAAGGCAAGAAAGCTCGCAACTTACAT
AC----ACATAGTTACAACTTACAGGCGGTCTGTTCTCGTGCCACATATCTACTGAACCAATCAAAAGAGAAGAAAGAAG
ATTCTACGGTG------CCAGATCCATTCCATTCCCTAGTTGACAGGAGCAACGCA----TGCTGGTTTTTCCAGGTCTA
CGACTACGAGCACCAGTTCCAGCAGCCCAGCGAGGGCGGCATCCTCCCGGTTCTCCTGATGTGCTCTGCCTGCTCCGCCG
TCCTCGCGGCGCTGCGGTCCCTCTTCGACTCTGCGGCAGCTCGCTGCTCGTCCGCGGTGTGCCTCGTGGACGCGAGCTTG
CTCATCAACTTGTCTTGCGCACGGGCTCGCATCCTCTCCACCT
>chr6B_832
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-------------------------------ATCGGATCCTCGACACCAGGCCCAGCCCACTGATTTTACCCGACGCCGC
CTCCCTCTTTCCTTTCCCCTTCCTCTTCCCCT-CCCCCCATCTCCTCCCCCGACGCCGAACCGAATCGCCGCAGCAGCCG
CCGGAGAAGAACAAATCGAGCGCCAGCCGCCATGTCCGGCGTGGAGGAGGAGGAGAACGCCGCCGAGCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCTAGGGTTTCCTCCCCACCAAATCCCCCCTCCCGATCCGCCCAACTAACCCTAGT
GTTTCCTCTTCTTGTGTTG---------GCGCAGAGTTTCTCAAGGCCAAGTGCCTGATGAACTGCGAGGTGGCGATAAT
CCTGGAGCACAAGTGGGAGCAGCTGCAGCACATGTCGGACGGCGGCGCCGACCAGGTCTCGCAGGTGTTCGAGAAGTCGC
AGGCCTACGTCAAGCGCTTCAGCCGCTACAAGAACCCCGACGCCGTCCGCCAGGTCCGCGAGACGCTCTCCCGCTACAGC
CTCGTCGAGTTCGAGCTCTGCACCCTCGGCAACCTCTGCCCCGACACCGCCGACGAGGCCAAGGCGCTCGTCCCCTCCCT
CGTCCCCGGCGGCAGGTTCGACAGCGACGACCGCGTCGACAAGATGCTCAACGACCTCTCACTCATCAAGAAGTTCGAGT
AGCCGCCCCCATAATATGCT------------------------------------------------------------
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-------------------------------------------------------CCTTCTTGCTCTTCTTG----TGTT
CCTCCAGTGGACATGGACATGGAGA-------C--------------------CGTGTGCCATTTATCAGTCTCAAGAAG
TACTA---GCTACTAGTAGCCTAGTTTGGTGATATGTTTAATCTTCAGATTATCTCCTCCTATGCTATGATCATAAGGCA
TCAGCAGTGTCAATCTCAAATG----------------------------------TATGGAGTTGATTAAACCTTGTTG
TTATGCTGTCTTGGAGAAAAATGTAGTAGCTTCTTGTTGGAGATATATGGAGT--------------------TTACCCT
CCTATATGCTATGACTATAAGACGGAGTTGATTAAACATTTGTTGA--TATCATCTTGCTG------------G---AGA
ATTTGGTTTCAGACTGAAAATTCGTTATCTGTTTGTCATCTCCTTGGCCTGCTTGTGGTTTACAATCTCCAGAAGGAAAC
ACTTGTGATGAAACCTTGTTGCTATCATCTTGTGATTTTCATCATCTGGAAATAATTTTGTTTCAGACTGGAAATCAGTT
ATATCTGTTTGTCATCTTGTCGGCCTGCTTGTAGTTCACAATCTCCAGAATGAAATATCAAAATGTTCAAGTAGCCGCTA
CCCATAAGCCTGTTTGTTGCTCTTGTTCCTCGCT----------------------------------------------
-------------------------------------------TTATTTTGCTGATATGTTTAATCTTCATATCATCTCC
TA----TGCTATGATCATAAGACATCAGTGTCAATCT-CAGATGCATGGAGTTAATTAAACC------------------
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------------------------------------------------TGGTTGCTGTCATCTTGTGATTCTGAT---CT
GGAAAGAATCTAGTTTCAGACTGAAAGTTCATTATCTACTTGATCTCTGTTTTG--------------------------
----------CTTGCTCTTTTACCACTAGTGCTTTTGTATGCATCTCAACTACTCCCTCCGATCCGATTTACCCGTCGTG
GTTTTAGTACAAGACAAGTTTTAGTACAAGACAAGTAAATCGGAACGGAGGGAGTACAAGACAAGTGCTGCCC-------
----TGAACATATGAAAGCTGAAATTCTCATGTTTCT---------CCAGCTGGAAGCAACATTGCTGCCTCTACGGGAA
CATAAACC-----------CTCAGCATCCCTGAAGAACGCAAGAAACAG-----AAGGCATGAAAGCTCGCATCTTACAC
ATACATACATAGTTACAACTTGTGA----TCTGTCCTCGTGTCACATATCTACTGAACCAATCAAAAGAG----AAGAAG
ATTCTACGGTGCCAGATCCAGATCCATTCCATTCCCTAGTTGACAGGAGCAAACACATGCTGTTTTTTTTTCTGGGCCTA
CGACTACGAGCACCAGTTCCAGCAGCCGAGCGAGGGCGGCATCCGCCCGGTTCTCCTGATGTGCTCTGCCTGCTCCGCCG
TCCTCACGGCGCTGCGGTCCCTCTTCGACTCGGCGGCAGCTCGCTGCTCGTCCGCGGTGTGCCTCGTGGACGCGAGCTTG
CTCATCAGCTTGTCCTGGGCACGGGCTCGCATCCTCTCCACCT
>chr6D_832
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-------------------------------ATCGGATCCGCGACCC-AGGCCCAGCC--CTGAGTTTACCCGACGCCAC
CCCCTCTTTTCTTTCCCCCTTCCTCTTCAACTCCCGTC--TCACCTCTCCCGACGCCGAACCGAATCGCAGCAGCGGCAG
CCGGAGAAGAAGAGATCGAGCGCCAGCAGCCATGTCCGGCATGGAGGAGGAGGAGAACGCCGCCGAGCTCAAGATCGGCG
AAGGTCCGTCCCTCCCATCCCCTCACGCCCCATCACCCCCACCCCACCCCAC----------------------------
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-------------------------CTAGGGTTTCCCAAGAACAGATCCGCCGTA----------CCAACTAACCCTAAC
CCCCACCGCTCTTCATCATCTTG--TTCGCGCAGAGTTCCTGAAGGCCAAGTGCCTGATGAACTGCGAGGTGGCGATAAT
CCTGGAGCACAAGTGGGAGCAGCTGCAGCACATGTCGGACGGCGGCGCCGACCAGGTCTCGCAGGTCTTCGAGAAGTCGC
AGGCCTACGTCAAGCGCTTCAGCCGCTACAAGAACCCCGACGCGGTCCGCCAGGTCCGCGAGACGCTCTCCCGCTACAGC
CTCGTCGAGTTCGAGCTCTGCACCCTCGGGAACCTCTGCCCCGACACCGCCGACGAGGCCAAGGCGCTCGTCCCCTCCCT
CGTCCCCGGCGGCAGGTTCGACAGCGACGACCGGGTCGACAAGATGCTCAACGACCTCTCCCTCATCAAGAAGTTCGAGT
AGTAGCCCCCATAATATGCTCTTCTTGTCTTCCTCCAGTGATATGTTTAAGCTTCAGATTATCTCCTTTTATTGCGCTAT
GATCATAAGACATCAGTGTCAGTCTCAAATGAATGGAGTTAATTAAACCTTGTTGCTATGCTGTCTTGGAGAACAATGAA
GTTGCTGTTGTTAACTTGGGTTTGCTGTTTAATCTTCTTCACATACCCCTCCTATGCTATGATCATAAGGTGGGGTTGAT
TAAACCTTGTTGCTAGCCATCGTCTTGTGGTTTGGATCATCTGGAAAGAATTTGGTTTCAGACTGAAAATTAGTTCATCT
GTTTGTCCTGCTTGTACAATCTCCAGAAGGAAACATTTGTGCCCTTGCCGGTGTTTATCTGTATTATGCTCATGAGGTAC
CAGTGTCAGTCTAAAATGTATGGAGTTAATTCAACCTTGTTGTTGTGCTGTCTTGAGAAAAATTGCTTCCATCTTTATGT
GGATTTTGATCATCTGGAAAAATTTGTTTCTGGCTCAAAATTCGTTGTCTGTTTGATCCCCACTTGTTGCCCAAATTTCA
AGATGCACAACGACCTCTCACTCGTCAAGACGTTTGAGTACCTGCTACCCATAAGCCTGCTTGTTGC------TCTTGTT
CCTCCAATGGACATGAACATGGAGATGGAGATTCGTCTCCCTCCCCTCCCCTTCATGTGTCATTTATCAGTCTCAAGACA
TACAC---GCTACTGTTAGCTTAGTTTGGTAAT--GTTTAATCTTCACATTATGCCCTCATGTGCTATGATCATAAGACG
TCGGTATCAATC-TCAAATGTATGCAGTGAATTTCCTCAAAAAAAATATATATATATATGCAGTGAATTAAACCCTGTTA
CTGTGCTGTCTTGGGG-AAAATGTAGTAGCTGCTGTTGTTAACCTAGGTTGGTGCTGTTTAATCTTGACATTCCCCTCC-
----TATGCTATGATCATAAGAC--AGTTGATTAAACC-TTGTTGCGCTATCATCTTGTGATTTTGATCACCAGGAAAGA
ATCTGGTTTCAGACTAAAAATTAGTCATCTGTTTGTC-------------------------------------------
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--------------------------------------------------------ATCAAGAAGTTAGAGTAGCACCAT
ATATGTT-CCTTTTTGCTGTTCTTGTGTTCCTCCAATAGACATGGAGATGGAGCTGGAGATTCTCCATCCCCTCTCCTCC
ATGTGTCATTTTTCAGTCTCAAAATGTGCTAGCTACTGATAGCTTACTTTGGTGATATGTTTAATCTTCATATTATCTCC
TCCTATTGCTATTATCATAAGACATCAGTGTCAATCTTCAGATGTATGGAGTTAATTAACCCAAATGATAAGTGCCACAC
GTCAGGTGCTTGGCGCTCCGGCCCTGACGTTTTTCAATGGCAATTCCAGTCACGCTTGGCGCTCCGGCCCTGACGTTTTT
CAGTGGCAATTCCAGTCACACAAGGATGGCAAATTCCAGTGACACACGGCAAGTTCTGTCAAAAATAAACGGAAGCACAA
AAGTTGCCATGCCTGCCAACTAAAGTTGTCATCCTTACGTAACTAAACTGGTCATCGAAAACGTTTGGAGTTGCCATGTG
CTCGTACTTAACGTGTGGCACTTATCAAAGTCCTTAATTAAACATGCATGGTTGCTGTCATCTTGTGATTCTGATTACCT
GGAAAGATTCTAGTTTCAGACTGAAAATTCATTATCTATTTGATCTTTGTTTGGCCTGGTTGTTGTGTTTACAATCTCCA
GTAACCAACACTTGCTCTTTTACCACTAGTGTTTTTCTATGCATCTCAAC------------------------------
------------------------------------------------------TACAAGACAAGTGCTGCCCCCAGGTG
AATCTGAACATATGAAAGCTGAAAGGCTCATGTTTCTATTACCATCCCAGCTGGAAGCAACGTTGCTACCTCTATGGGAA
CATAAACC-----------CTCAGGATCACTGAAGAACGCAAGAAATGG-----AAGGCACGAAAGCTCGCATCTTACAC
ATACATACATAGTTACAACTTGTGA----TCTGTCCTCGCGTCACATATCTACTGAACCAATCAAAAGAG----AAGAAG
ATTCTACGG-G------CCAGATCCATTTCCTTCACTAGTTGAGAGGAGCAACACATGCTG---GGTTTTTCCAGGCCTG
CAACTAAGAGCACCAGTTCCAGCAGCCGAGCGAGGGCGGCATCCGCCCGGTTCTCCTGATGTGCTCTGCCTGCTCCGCCG
TCCTCGCGGCGCTGCGGTCCCTCTTCAATTCGGCGGCAGCTCGCTGCTCGTCCGCGGTGTGCCTCGTGGACGCGAGCTTG
CTCATCAGCTTGTCCTGCGCACGGGCTCGCATCCTCTCCACCT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------
----------S---------------S---------S--S---------------------------------S------
------------------------S-------------------------------------------------------
------S-S--S--S-SS------------------------S-SS----------------------------------
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-----------------------------------S--S-SSS---------------------------S---------
------------SS--------SSS--S----------------------------------------------------
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----------------------------------------------S---------------------------------
--------------------------S-----------------------------------------------------
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-------S------------------------------------------------------------------------
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---------------------------------------------------------------------S--S-------
----------------------------------------------------------------------------S---
-----SSS--S------------------S---------S------------------S---------------------
-----S-----S------S-------------------------------------------------S--S-----S--
------------------------------------------S--S--------------------SSSSS-S-------
------------S----------S---------------------------------S----S-------S-S-------
--------S---------------------S-------------------------S----S------------------
-S-----S-SSSS--SSSS-SSS-SSS-S--S-SSSSS------------------------------------------
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----------------S---SS-SS---SS-S-----------------S----------SSSSSSSS-SSSS---SSS-
S-SSS-S-SSSSSSSSSSS------------------S----------SSSSSS------S-----------S------S
-S-------------------SSSSSSSS-----S------S----------------------------SSSS------
-----------------------------------------------------S--------S-------------S---
---------------------------S----------------S-----------------------------------
-------------------------------S------------------------------------------------
-------S------S----------------------------
>forward_452
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--------------------------------GATGAACGAATCGCTTGGGC----------------------------
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>reverse_4212
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---------------------------------------------------GACAAGGCAAGAAAGCTCGC---------
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