>input_sequence_77649
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---------------------------------------------------------------ATGGGGTTCCCCTCAGT
GTGCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTGGTTCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGCTCT
GCCTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCTGACGACCACCCGGCCTACGCGCCGCCGCCAGACCTCTGGGCC
GTGGCGGAGTCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGACCGGGCCGGCGCCCGCGCCGGCGGCCATCAAGGCGCG
CCTCCCCGCCGTCCGGTACGCCGATCTCAGGAGCCGCCGCTGCGCCGCTGGGGCCGCGGCGGCGTCGACGTGCTGCGCCG
TGTGCCTGGGCGCGCTCGAGGCACGGCACCGCGTCCGGGAGCTCGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATA
GACAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCACAGACGCCGACGCCGGCAA
GCTGCCCACTTTTTCCTTCTGA----------------------------------------------------------
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>chr7B_1_TraesCS7B01G188200
ACCAATTTGTTACGGGTGGCGGGACCATGCGGGGCACTATGTCGCAACCTACTACAACGATGGCCATGCCGGAAGCTAGA
ATCGGCAGCCGTTTTTGC--GAAGTGGCTTGCATCAGAGCTGCAAC-CGATAGCAGGAGAAGCTACAACCGACGATAAGG
GGGAACCCGATGGCTCTGCAAACCTGTATTTTTTACTGGAACTGGCCGGCGCAAATGCGACATCCCCGGTGAAAGAAGTT
GCAACCGTCGGTGACAGAGGCTGCTATCAACGGATGACAAAAAGGGGGCAGTGACGGGTGCTCTGCGCAGCGGAGGGGTG
CTGCCGCCGTGGCCGGAGATGTGCGGCTAGCGTTGAGCGCATGTGTGTGAG-GAGAGAGTTGACTTTTGCGGGGGAGGAG
GAATTCAAATCTGATGGTTGTGCTTCCTCCAATCGGA-CGCCTACGCGGCAACTGGGCCGGCTGACCGGCGCATAGCACT
GGAAAAAAAGGCCCAGCTCAGATGACTTGTGCATGTTACTCAAAAAAAA--------------AAAAGATGATTTGTGCA
TGATCATCTTTTGGCAGGTGTCATCGGCCCATATATG-------------------------------------------
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------------------------------------TAACAAAGCCATACCCACACGCACGTCTTCTCGAGCTAACTACG
GGTTGCACTGCCCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGG
GAGCACGCACGCAGCAGTAGCACCCGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGTAGC
CCGTCTATTCTCGCTTGAC-----ATGTTTTCCTTTGTAGTACGCGTAGCCTCCCTCCCCCCTCTGGCCCTCTCCTCCAA
ACATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCATCCCCACCGTCC
CACCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCCTCAGT
GTGCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTGGTTCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGCTCT
GCCTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCTGACGACCACCCGGCCTACGCGCCGCCGCCAGACCTCTGGGCC
GTGGCGGAGTCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGACCGGGCCGGCGCCCGCGCCGGCGGCCATCAAGGCGCG
CCTCCCCGCCGTCCGGTACGCCGATCTCAGGAGCCGCCGCTGCGCCGCTGGGGCCGCGGCGGCGTCGACGTGCTGCGCCG
TGTGCCTGGGCGCGCTCGAGGCACGGCACCGCGTCCGGGAGCTCGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATA
GACAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCACAGACGCCGACGCCGGCAA
GCTGCCCACTTTTTCCTTCTGACCTCACGCTCCAAGGAGCGACCCTTCTGCCGCTGCAGTCTCGCCGCCAGAGATAGGTC
AGTCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCACCCGCCCATCTCTCCACGGATCCATGCTTTCACGAGAGAAGT
CAAAAGGGGATGAGAGAGAA--------------------AGAGACATAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGT
ACGTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTATGAGGAGGACAGGGATGGCTACCTGCATTGGATCTG
GTGAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTT--CTCTCTCTTTTTCAGCTCCTCTTCAACCTCACCC
ACTTCACTTTTTTAATCTTCTTCTTTGTAATTTCCTTCCCCTTCTCTTTTTCTTTTCTCCTTTTCTATTAACTTATTTTG
TGAGGGCAACTAAGAGAGAGATATCAAGAAAGAGAGATGTACATAGGTGCCTCCACTTGACAATATCGAAGAATGAATAA
GAATTGTCTCACATTACTCAACTTATCTTATTCTTTGATGTGTGCTATTTTTTTCGTATAACAAAGTTATATACGTGAAT
TGTATTGTAAAAGAGGTTATGTTGATTGTATGTGGTGTAGGTGGTGGATGGACCTCAATTGGGCTTTTCCCAATAGTAGA
TATGTTACCATCATGTTTGGTGTTTAGAGGGTAAGCCTCACGTCAGTGTAGAGGGGATTAGGATAAGCATTGCTTAAAGC
AACATGTACAATGCTTAATTAATCGCCACTGCGTGCTACTA---GCCACTTCCCTCAAATACTTGCCTGACACTAGTAAT
GGTGCACGCG-------GCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTGTTTGTTTGTCAGACAAATAA
CTAATCATT-----------------------------------------------------------------------
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----------TACATATGTCAATAACATCTTTCGCCGCAAATACATATTCAAGATGTCAAAATATACAAATGACTGCTAT
AAGAGATGCTGGAGT
>chr7D_1
ACCAATTTGTTACGGGTGGCAGGAGCACGCGGGGTACTATGTCGCAACCTACTACAACGACGGCCATGGCGGAAGCTAGA
ACCAGCAGCCATTTTTGCTGGAACTGGCTTGCATCGGAGCTGCAAATCGGTAGCGGGAGAAGCTACAACCGGTGATAAGG
GGGAACCTGGCGGCGCTGCAAACCTGTATTTTTTGCTGGAACCGGCCGGCGCAAATGCGACATCCCCGGTGGAAGGAGTT
GCAACCGTCGGCGACAAAGTCTGCTATCAGCGGATGACAAAAAGGGGGCAATTACGGGTGCTCCATGCTGCGGAGGGGTG
CTGCCGCCATGACCGGAGACGTGCGGCTAGCATTGAGCGCGTGTGCGTGGGAGAGAGAGTTGACTTTTGCAGAGGAGGGC
AGATTCAAATTTGATGGTTGTGCTTCCTCCAATCGGA-CGCCTACGCGGCAACTGGGCTGGGTGACCGGCGCTTAGGCT-
--AAGAAAAGGCCTAGCTCAGATGATTTGTGCAGGTTACTC-AAAAAAA--------------GAAAGATGATTTGTGCA
TGATCATCCTTTGGCAAGTGTCATCGGCCCATGTATGTAAGAGCATCTCCACTCGCCCCCCAACAGGCCCCCACGGTGCC
TTTTTAGCGCCGGCAGCGAAAAATCGGCCCAATCGCGTCCCCAGATCGTCGTTTATCACCGATTTGGGCCGAAATAACAA
TCGGCGAACCGAAGCCGAACCCAGCGCACCGGGGGGCGCCTAGGGGCACCGCCTGAAGCGAAAAGGTGCGCGGACCCGCC
ATGTCGGCGACACACCGGTATGTTCCCGCCGCCCCCCTTCCCTCCATTTCCCTAGTGCTTCCCCCTTCTCCCCCGCCGCT
CCCGCCATTCTCCTCATCAGATCCGGCCTCCATGCCACCAAAGAAGTATGCGCTCCCTCGCCTAGCCACCGATACCAGCC
AGCCAAAGCAGAGGAAACCGAGGGCGCCAATGGCAAGGCCACCAGGCTTGTCGAACGCCCAGTGGAAGGCGGACATTGAG
CGCCGGGAGGCGGACACGGCCGATTGGCGGAACAGGCTCATCACGAAGAGGGCCAAGGACGCGGCGGCGGCGGCGGAGCA
GGGAGAGGCGTCTCACGCGGTAACGATGAACCTTCTGCCTCAACAGATCGGCCACTGCCCACAAGCAGGGCGGGGGAGCC
AGCAGAGCACCGCGTCAGATCGGGCGACCAACGGGAGAAATTAGAAGCGGGCGTCCAACGCCAGACCGGGCGAGCCTCGC
GTCAAGTGGACGTCCAAGGAAGACGAGTGCCTCACCGACGCATGGAAGAACATCAGTATCGACCCGATGACCGGCTCGAA
TCAGAACGCCGACATGCACCGGAGAAGGATCAAGACGGCGTTCGACGAGCGCAAGTTGGTCGACCCCGACTTCGCCAACA
TCCACATGGATCACGACGAGAAGGCCATGGCGAACCATTGGGTGACCATCCAGGCAGCCTGCAACAAGTGGCATGGGATC
CTAGAGGAGGTCGCGGTTCGCCCGGAAAGCGGCGCCAACGTCGAGGGTCACGTATGGACAGTCGTCTTAGTTCTTTCGTT
GTGTGCTTCGCCGACACTTGTTCTTCGGCTATCCAGATGGTTCGGATGTTCAACATGTTTCGCCAGGACAACAGTGACCA
AGAGTTCAAGTTCCTTCACGCATTCTCCAGGATCGAGTCGTGCGAGAAGTGGAGGGAGTGCCGGCTCGCTCTCGCCAAGG
CCAAGGAGACCTACAAGCCGGACGCGCCTGCCCAGGCGGCGGCAGAAGGGCGCCCTACTGGCAACAAAAGAGCTAAGGCG
GCGAGGGGCGCGACACCCGCTGCCGAACGGCTACAATTGATCGAGCAGTGCATCGCTGACGCCAAGAACAACGCCGCCAA
GAGGGAGGATAAATCCGAAGCGAGGTGGTCGGCGTTAGTTGATGACGAAGCAGGACGTCAAGCTCGACCTTCTCAGGACC
AACGTCGCCGCGAAGAAGAGGAATACCGACCTGGCGTTATTCATGGCGGCAGATATGTCGACGATGGACGAGCAGGTGAA
GGCATGGTACCTAGCGGAGCGTAGCCTCGTCTTGAACCAGATGCCGGGACCGACGGCGACCACCGCCTCTACGCACGCCG
ACGCCGACGCCCAGCCCGAGCAATGAAGCTATGCCAACGCCGATGCCCAGCTCGAGCAATGAAGTTGTGCCGACGCCAAC
GCACAACCCGAGCACTGAAGCTGCGCCGACGCCGAGCCCGAGTACTAAAGCTGCGCTGACGCCGACGCCGACGCCGCCCT
CGGCCAGTCCCACGGCAGAGGAGCCTGCCGTTTGATGCGTTCCATGTCTATGATTCCTTCCTTTTGATAGCCAGACTTTT
GGGTATGTTCGATCGCCTGCCTGTGGCATGATGATCGCCGAATTTGTGGCGTTTTTTGGCAGCTGGAAAGACAAGTTCAA
TTTTTTGACATCTTGGGGCCGAAACCTAGAAGCACGACTGGAAATTCGATCGCTCCTAAGGCCAAAAAACCGCAGGTGCA
AACGCCAAAAGACATTCGCCAGATGTGCTAGTGCTCTAACAAAGCCACACCCACACGCACGTCTTCTCGAGCTAACTGCG
GGTTGCACTGCGCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGA
GAGCACGCA---------------CGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGTAGC
CCGTCTATTCTCGCTTGAC-----ATGTTTTCTTTTGTAGTACGCGTAGCCTCCCCCCCTCT------CCTCCCCTCCAA
ACATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCACCCCCACCGTCC
CACCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCCTCAGT
GTGCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTGGTGCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGCTCT
GCCTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCCGACGACCACCCGGCCTACGCGCCGCCGCCGGACCTCTGGGCC
GTGGCGGAGGCAGCGGCTCCCTCGTCCTCTTTATCCCTGGCATCCGGGCCGGCGCCCGCGCCGGCGGCCATCAAGGCGCG
CCTCCCCGCCGTCCGGTATGCTGACCTCAAGAGCCGGCGCTGCGCCGCCGGGGCCGCGGCGGCGTCGACCTGCTGCGCCG
TGTGCCTGGGCGCGCTCGAGGCGCGGCACCGCGTCCGCGAGCTCGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATA
GACAAGTGGGTCGACAAGGGTCAGGCTACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCACCGACGCCGACGCCGGCAA
GCTGCCCTCTTTTTCCTTCTGACCTCACGCTCCAAGGAGCGACCCTTCTGCCGCTGCGGCCTCGCCGCCAGAGATAGGTC
AGTCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCATCCGCCCATCTCTCCACGGATCCATGCTTTCACGAGAGAAAT
CAAAAGGGGATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGT
ACGTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTATGAGGAGGACAGGGATGGCTACCTGCATTGGATCTG
GTGAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTT--CTCTCTCTTTTTCAGCTCCTCTTCAACCTCACCC
ACTTCACTTTTTTAATCTTCTTTTTTGTAATTTCCTTCCCCTTCTCCTTTTCTTTTCTCCTTTTCTATTAACTTATTTTA
TGAGGGGAATTAAGAGAGAGAGATCAAGAAAGAGAGATGTACATAGCTGCCTCCACTTGACAATATCGAAGAATGAATAA
GAATTGTCTGACATCACTCAACTTATCTTATTCTTTGCCGTGCGCT-TTTTTTTCGTATATCAAAGTTATATACGTGGAT
TGTATTGTAAAAGAGGTTATGTAGATTGTATGTAGTGTAGGTGGTGGATGGACCTCAATTGGGCTTTTCCCAATAGTAGA
TATGTTACCATCATGTTTGGTGTTTAGAGGGTAAGCCTCACGTCAATGTAGA-GGGGTTAGGATAAGCATTGCTTAAAGC
AACGTGCACAGTGCTTAATTAATCGACACTACGTGCTACTA---GCCACTTCCCTCAAATACTTACCAGACACTAGTAAT
GGTGCACGCAGCACGCTGCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTCTTTGTTTGTCAGACAACTAA
ACTAATCATCTACTCCCTCCGTTCCCAAATGTACTTTCTATAGATTTCAACAGGTGACTACATACGGAGCAAAATTAATA
AATCTACACACTAAAATATGTCTACATGCATCCGTATATTGTATTCTATTTGAAATGTCTACAAAGACTTATATTTAGGA
ACGGAGGGAGTACATATGTCAATAACATCTTTCGCCGCAAATACATATTCAAGATGTCAAAATATACAAATGACTGCTAT
AAGAGATGCTGGAGT
>chr7A_405
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--------ATCTGATGGTTGTGTTTCCTCCAATCGGAACGCCTACGCGG-----------GCTGACCAGCGCTCAGCGCT
-GAAAAAAAGGCCTAGCTCACATGATTTGTACAGGTTACTC-AAAAAAAAAGATGATTTTTTTAAAAGAAGATTTGTGCA
TGATCATCCTTTGGCAGGTGTCATCGACCCATATATG-------------------------------------------
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------------------------------------TAACAAAGCCACTCCCACACGCACGTGTTCTCGAGCTAACTACG
GGTTGCACTGCGCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGA
TTGCACGCACGCAGCAGTAGCACCCGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGCAGC
CCGTCTATTCTCGCTTGACATGAAATGTTTTCTTTTGTAGTACGCGTAGCCTCCCTCTTCTCA----------CCTCCAA
ACATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCACCCCCACCGTCC
CACCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCGTCAGT
GTGCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTCGTGCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGTTCT
GCCTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCCGACGACCACCCGGCCTACGCGCCGCCGCCGGACCTCTGGGCC
TTGGCGGAGGCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGTCCGGGCCAGCGCCCGCGCCGGCGGCCATCAAGGCGCG
CCTCCCCGCCGTCCGGTACGCCGACCTCAAGAGCCGCCGCTGCGCCGCCGGGGCCGCGGCGGCGTCGACCTGCTGCGCCG
TGTGCCTGGGCGCGCTCGAGGCGCGGCACCGCGTCCGCGAGCTTGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATA
GACAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCGCCGACGCCGACGCTGGCAA
GCTGCCCTCTTTTTCCTTCTGACCTCACGCTCCAAGGAGCAACCCTGCTGCCGCTGCAGCCTCGCCGCCAGAGATAGGTC
AGTCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCATCCGCCCATCTGTCCACAGATCCATGCTTTCATGAGAGAAAT
CAGAAGGGGGTGAGAGAGAGA----------------------GACAGAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGT
ACGTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTGTGAGGAGGACAGGGATGGCTACCTGCATTGGATCTG
GTGAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTTCTCTCTCTCTTTTTCAGCTCCTCTTCAACCTTACCC
ACTTCACTTTTTTAATCTTCTTTTTTGTAATTTCCTTCCTCTTCTCCTTTTCTTTTCTCCTTTTCTATTAAATTATTTTG
TGAGGGAAATTAAGAGAGAGACATCAAGAAAGAGAGATGTACATAGCTGCCTCCACTTGACAATATCGAAGAATGAATAA
GAATTGTCTCACATCACTCAACTTATCTTATTCTTTATCATGAGCT-TTTTTTCCGTATAACAAAGTTATATACGCGGAT
TGTATTGTAAAACATGCTATGTAGATTGTATGTAGTGTAGGTGGTGGATGGACCACAATTGGACTTTTCCCAATAGTAGA
TATGTTGCCATCATGTTTGGTGTTTAGAGGGCAAGCCTCACGTCAGTGTAGATGGGATTAGGATAAGAATTGCTTAAAGC
AACGTGCATAGTGCTTAATTAATTGCCACTGCGTGCTAGTACTAGCCACTTCCCTCAAATACTTGCCTGACACTAGTAAT
GGTGCACACA-------GCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTGTTTCTTTGTTAGACAACTAA
CTAATCATC-----------------------------------------------------------------------
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----------TACATAGGTCAATAACATCTTTCGCCGCAAATACATATTTAAGACGTCAAAATATACAAATGACTGCTAT
AAGAGATGTTGGAGT
>SNPs
--------------------S---S--S------S-------------------------S-------S-----------
-S-S------S------------S-----------S---------S---S----S----------------SS-------
-------S-SS---S-------------------S-------S----------------------------S---S----
-----------S----S--S---------S--------------------S-S----------SSS--S-----------
--------S--S-------S-----------S--------S----S---S--------------------S-S-----SS
SS--------------------------------------------------------S-------------S----S--
S------------S-----------S-------S-------S--------------------------------------
--------S-----------------------------------------------------------------------
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-----------------------------------------------S--------------------------------
-----------S-------------------------------------------------------------------S
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--------------------------------S-----------------------------SSSSSS----S-------
--------------------------------------------------------------------S-----------
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---------------------------------------S----------------------------------------
-------------------------------------S-----------------------------S------------
---------S--------------------------------S-------------------------------------
------------------------S----S------------------S--------------------S----------
----------------------S--------------S------------------------------------------
--------------------------------------------------------------S-----------------
-------S---------------------------------------------------S--------------------
--------------------------------------S---------------------------------------S-
-------------------S---------------------------S--------------------------------
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----------------------S-----------------------S---------------------------------
------S--S-----------S------------------------S---------------------------------
--------------S----------------------SS---S---S------------------------------S--
----------------------S----------S----------------------------------------------
----------------------------------------------------S---------------------------
---S--S---S---------------------------------------------------------------------
---------S------------------------------------------------------------------S---
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>forward_506
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------AAAGGCCCAGCTCAGATGAC------------------------------------------------------
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>reverse_4194
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---------------------------------GGTGTAGGTGGTGGATGGAC---------------------------
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