>input_sequence_77647
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-------------------------------------------------------------ATGGGGTTCCCGTCAGTGT
GCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTCGTGCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGTTCTGC
CTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCCGACGACCACCCGGCCTACGCGCCGCCGCCGGACCTCTGGGCCTT
GGCGGAGGCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGTCCGGGCCAGCGCCCGCGCCGGCGGCCATCAAGGCGCGCC
TCCCCGCCGTCCGGTACGCCGACCTCAAGAGCCGCCGCTGCGCCGCCGGGGCCGCGGCGGCGTCGACCTGCTGCGCCGTG
TGCCTGGGCGCGCTCGAGGCGCGGCACCGCGTCCGCGAGCTTGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATAGA
CAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCGCCGACGCCGACGCTGGCAAGC
TGCCCTCTTTTTCCTTCTGA------------------------------------------------------------
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>chr7A_1_TraesCS7A01G300000
CAATAAGTTTTGGGGAACCAGCACAACCCTCTAGGGGTGGCTTATCTCATTATATATAATGGTTATGTTACAATATGTAC
AATATACGTACATAGATACAGAAGCTATACATAGTCTAACAGCAACCATCGGCGACAGAGGCTGCTATGAGGAGATGACG
AAAAGGGGCAGTGACGGTTGCTGCGCGCTGCGGAGTGGTGCTACCGCCGTGGCCGGAGACGTGCGGCTAGCATTGAGCGT
GTGTGCGTGGGAGAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTATCTGATGGTTGTGTTTCCTCCAATCGGAACGCCTAC----------GCGGGCTGACCAGCGCTCAGCGCTGA
AAAAAA-GGCCTAGCTCACATGATTTGTACAGGTTACTCAAAAAAAAAGATGATTTTTTTAAAAGAAGATTTGTGCATGA
TCATCCTTTGGCAGGTGTCATCGACCCATATATGTAACAAAGCCACTCCCACACGCACGTGTTCTCGAGCTAACTACGGG
TTGCACTGCGCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGATT
GCACGCACGCAGCAGTAGCACCCGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGCAGCCC
GTCTATTCTCGCTTGACATGAAATGTTTTCTTTTGTAGTACGCGTAGCCTCCCTCTTCTCA----------CCTCCAAAC
ATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCACCCCCACCGTCCCA
CCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCGTCAGTGT
GCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTCGTGCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGTTCTGC
CTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCCGACGACCACCCGGCCTACGCGCCGCCGCCGGACCTCTGGGCCTT
GGCGGAGGCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGTCCGGGCCAGCGCCCGCGCCGGCGGCCATCAAGGCGCGCC
TCCCCGCCGTCCGGTACGCCGACCTCAAGAGCCGCCGCTGCGCCGCCGGGGCCGCGGCGGCGTCGACCTGCTGCGCCGTG
TGCCTGGGCGCGCTCGAGGCGCGGCACCGCGTCCGCGAGCTTGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATAGA
CAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCGCCGACGCCGACGCTGGCAAGC
TGCCCTCTTTTTCCTTCTGACCTCACGCTCCAAGGAGCAACCCTGCTGCCGCTGCAGCCTCGCCGCCAGAGATAGGTCAG
TCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCATCCGCCCATCTGTCCACAGATCCATGCTTTCATGAGAGAAATCA
GAAGGGGGTGAGAGAGA----------------------GAGACAGAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGTAC
GTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTGTGAGGAGGACAGGGATGGCTACCTGCATTGGATCTGGT
GAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTTCTCTCTCTCTTTTTCAGCTCCTCTTCAACCTTACCCAC
TTCACTTTTTTAATCTTCTTTTTTGTAATTTCCTTCCTCTTCTCCTTTTCTTTTCTCCTTTTCTATTAAATTATTTTGTG
AGGGAAATTAAGAGAGAGACATCAAGAAAGAGAGATGTACATAGCTGCCTCCACTTGACAATATCGAAGAATGAATAAGA
ATTGTCTCACATCACTCAACTTATCTTATTCTTTATCATGAGCT-TTTTTTCCGTATAACAAAGTTATATACGCGGATTG
TATTGTAAAACATGCTATGTAGATTGTATGTAGTGTAGGTGGTGGATGGACCACAATTGGACTTTTCCCAATAGTAGATA
TGTTGCCATCATGTTTGGTGTTTAGAGGGCAAGCCTCACGTCAGTGTAGATGGGATTAGGATAAGAATTGCTTAAAGCAA
CGTGCATAGTGCTTAATTAATTGCCACTGCGTGCTAGTACTAGCCACTTCCCTCAAATACTTGCCTGACACTAGTAATGG
TGCACACA-------GCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTGTTTCTTTGTTAGACAACTAACT
AATCATC-------------------------------------------------------------------------
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--------TACATAGGTCAATAACATCTTTCGCCGCAAATACATATTTAAGACGTCAAAATATACAAATGACTGCTATAA
GAGATGTTGGA
>chr7B_408
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-------ATCTGATGGTTGTGCTTCCTCCAATCGGACGCCTACGCGGCAACTGGGCCGGCTGACCGGCGCATAGCACTGG
AAAAAAAGGCCCAGCTCAGATGACTTGTGCATGTTACTCAAAAAAAA-------------AAAAGATGATTTGTGCATGA
TCATCTTTTGGCAGGTGTCATCGGCCCATATATGTAACAAAGCCATACCCACACGCACGTCTTCTCGAGCTAACTACGGG
TTGCACTGCCCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGGGA
GCACGCACGCAGCAGTAGCACCCGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGTAGCCC
GTCTATTCTCGCTTGACATG-----TTTTCCTTTGTAGTACGCGTAGCCTCCCTCCCCCCTCTGGCCCTCTCCTCCAAAC
ATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCATCCCCACCGTCCCA
CCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCCTCAGTGT
GCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTGGTTCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGCTCTGC
CTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCTGACGACCACCCGGCCTACGCGCCGCCGCCAGACCTCTGGGCCGT
GGCGGAGTCGGCGGCGCCCTCGTCCTCTTTATCCCTGGCGACCGGGCCGGCGCCCGCGCCGGCGGCCATCAAGGCGCGCC
TCCCCGCCGTCCGGTACGCCGATCTCAGGAGCCGCCGCTGCGCCGCTGGGGCCGCGGCGGCGTCGACGTGCTGCGCCGTG
TGCCTGGGCGCGCTCGAGGCACGGCACCGCGTCCGGGAGCTCGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATAGA
CAAGTGGGTCGACAAGGGTCAGGCCACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCACAGACGCCGACGCCGGCAAGC
TGCCCACTTTTTCCTTCTGACCTCACGCTCCAAGGAGCGACCCTTCTGCCGCTGCAGTCTCGCCGCCAGAGATAGGTCAG
TCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCACCCGCCCATCTCTCCACGGATCCATGCTTTCACGAGAGAAGTCA
AAAGGGGATGAGAGAGAA--------------------AGAGACATAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGTAC
GTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTATGAGGAGGACAGGGATGGCTACCTGCATTGGATCTGGT
GAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTT--CTCTCTCTTTTTCAGCTCCTCTTCAACCTCACCCAC
TTCACTTTTTTAATCTTCTTCTTTGTAATTTCCTTCCCCTTCTCTTTTTCTTTTCTCCTTTTCTATTAACTTATTTTGTG
AGGGCAACTAAGAGAGAGATATCAAGAAAGAGAGATGTACATAGGTGCCTCCACTTGACAATATCGAAGAATGAATAAGA
ATTGTCTCACATTACTCAACTTATCTTATTCTTTGATGTGTGCTATTTTTTTCGTATAACAAAGTTATATACGTGAATTG
TATTGTAAAAGAGGTTATGTTGATTGTATGTGGTGTAGGTGGTGGATGGACCTCAATTGGGCTTTTCCCAATAGTAGATA
TGTTACCATCATGTTTGGTGTTTAGAGGGTAAGCCTCACGTCAGTGTAGAGGGGATTAGGATAAGCATTGCTTAAAGCAA
CATGTACAATGCTTAATTAATCGCCACTGCGTGCTACTA---GCCACTTCCCTCAAATACTTGCCTGACACTAGTAATGG
TGCACGCG-------GCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTGTTTGTTTGTCAGACAAATAACT
AATCATT-------------------------------------------------------------------------
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--------TACATATGTCAATAACATCTTTCGCCGCAAATACATATTCAAGATGTCAAAATATACAAATGACTGCTATAA
GAGATGCTGGA
>chr7D_584
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----------------------------------TAACAAAGCCACACCCACACGCACGTCTTCTCGAGCTAACTGCGGG
TTGCACTGCGCTTAATCAGGCAACACGTATGGCTAAAGACAAGTGAGACCGCGAGAGTGCTGATATTTCCGGCGGCGAGA
GCACGCA---------------CGTTGTCAGCGTCACGGGCAGACAAGGTCTATAAATCTTCCAACCGTGCACGTAGCCC
GTCTATTCTCGCTTGACATG-----TTTTCTTTTGTAGTACGCGTAGCCTCCCCCCCTCT------CCTCCCCTCCAAAC
ATAGCCTGCCCACAAAACGCATCCATCCCTCTCGCTTATATATAGACCCCACCTCTCCTCCCCTCACCCCCACCGTCCCA
CCTCCCTCTCTCTCGCTCCTGCCGTGCTTTCTCTCTCTAACTACAAGCGTGCCCGCCGGCCATGGGGTTCCCCTCAGTGT
GCTACTGCGTCATCCTGCCGCAGCCGCTCATCCTGGTGCTGCAGCTGCTCGACTTCCTCCGCCACGCGGTCCTGCTCTGC
CTCTCCTCGCTCGGCCTCGCGGCGCCGCCGGCGGCCGACGACCACCCGGCCTACGCGCCGCCGCCGGACCTCTGGGCCGT
GGCGGAGGCAGCGGCTCCCTCGTCCTCTTTATCCCTGGCATCCGGGCCGGCGCCCGCGCCGGCGGCCATCAAGGCGCGCC
TCCCCGCCGTCCGGTATGCTGACCTCAAGAGCCGGCGCTGCGCCGCCGGGGCCGCGGCGGCGTCGACCTGCTGCGCCGTG
TGCCTGGGCGCGCTCGAGGCGCGGCACCGCGTCCGCGAGCTCGGCAACTGCGCGCACGCCTTCCACAAGGCCTGCATAGA
CAAGTGGGTCGACAAGGGTCAGGCTACTTGCCCCCTCTGCCGCGCGCTCCTCCTCCCCACCGACGCCGACGCCGGCAAGC
TGCCCTCTTTTTCCTTCTGACCTCACGCTCCAAGGAGCGACCCTTCTGCCGCTGCGGCCTCGCCGCCAGAGATAGGTCAG
TCCGTATAGCTAGCTAGCTAGGCCCTTCTCCATCCATCCGCCCATCTCTCCACGGATCCATGCTTTCACGAGAGAAATCA
AAAGGGGATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGCGAGAAGAAGAGGTGTGCGTGCGTGTGTGTAC
GTTTGTGTGGTGGAGTATTATTGGTAGGTGAGGCACTAATTATGAGGAGGACAGGGATGGCTACCTGCATTGGATCTGGT
GAATGAGCACTATGCATAGCACTTGCAGATCCATATGCTCTT--CTCTCTCTTTTTCAGCTCCTCTTCAACCTCACCCAC
TTCACTTTTTTAATCTTCTTTTTTGTAATTTCCTTCCCCTTCTCCTTTTCTTTTCTCCTTTTCTATTAACTTATTTTATG
AGGGGAATTAAGAGAGAGAGATCAAGAAAGAGAGATGTACATAGCTGCCTCCACTTGACAATATCGAAGAATGAATAAGA
ATTGTCTGACATCACTCAACTTATCTTATTCTTTGCCGTGCGCT-TTTTTTTCGTATATCAAAGTTATATACGTGGATTG
TATTGTAAAAGAGGTTATGTAGATTGTATGTAGTGTAGGTGGTGGATGGACCTCAATTGGGCTTTTCCCAATAGTAGATA
TGTTACCATCATGTTTGGTGTTTAGAGGGTAAGCCTCACGTCAATGTAGA-GGGGTTAGGATAAGCATTGCTTAAAGCAA
CGTGCACAGTGCTTAATTAATCGACACTACGTGCTACTA---GCCACTTCCCTCAAATACTTACCAGACACTAGTAATGG
TGCACGCAGCACGCTGCACGCACAATGCGCGATAGGATTGAAAAGGTACTATATTTTCTTTGTTTGTCAGACAACTAAAC
TAATCATCTACTCCCTCCGTTCCCAAATGTACTTTCTATAGATTTCAACAGGTGACTACATACGGAGCAAAATTAATAAA
TCTACACACTAAAATATGTCTACATGCATCCGTATATTGTATTCTATTTGAAATGTCTACAAAGACTTATATTTAGGAAC
GGAGGGAGTACATATGTCAATAACATCTTTCGCCGCAAATACATATTCAAGATGTCAAAATATACAAATGACTGCTATAA
GAGATGCTGGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--------------S--------------SSS-SSSS------------S--------S----SS---S---S
-----------S------S----S----S--S---------------SSSSSSSSSSSSS------S-------------
-----S-----------------S----------------------S-------------S-------------------
------------------------------------------------------------------------------SS
--------------------------------------------------------------------------S-----
--------------------SSSSS------------------------------SS-S-S-------------------
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------------------------------------------------------------------------S-------
----------------------------------S---------------------------------------S-----
------------------------------------------------------------------------------S-
------------------------------------------------S-------------------------------
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-----------------------------------------S--------------------------------------
----------------------------------------------------------S-------------S-------
--------------------------------------S-----S-----------------------------------
-----------------------------------------------S-----S--------------S-----------
S------S------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------------------------------SS-----------------------------S------
-------------------------------------S-------------------------------S----------
----S--------------S------------------------------------------------------------
----------------------------------SS-S--S----------S---------------------S------
----------S-S-S-------------------------------------S-------S-------------------
----S------------------------S--------------------S--------------S--------------
------S--------------S--------------S--SSS--------------------------------------
-----S-------------------------------------------------------S-----S------------
------S-------------------------------------------------------------------------
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--------------S--------------------------------S----S---------------------------
------S----
>forward_152
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----------------------------------------------------CGACAGAGGCTGCTATGAGG--------
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>reverse_1681
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GAAGGGGGTGAGAGAGAGAGA-----------------------------------------------------------
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