>input_sequence_77631
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-------------------------------------------ATGGCGACTGCG-ATGGCCATGAGCTCCTTCGCCGGT
---GCGGCCGTCCTGCCGTGCGGCTCGGCAGGC---CGCTTCGGCGCCAGGTCTCTGCCGGCATTGGGCCGCCGCACCCT
CATTGTCAGGGCACAGACCGAGGGCCCGAGCACACCACCGCCAAACAAACCCAAGGCGAGCACCTCGATCTGGGACGCGA
TGGCGTTCAGCGGCCCTGCCCCGGAGCGCATCAACGGCCGCCTTGCCATGGTAGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGACGTGGCGACGGACTCCTCTCGCAGCTCGGCAGTGGCACCGGGCAGGCATGGTTCGCCTACACCGTGGCGGTGCT
GACCATGGCGTCGTTGGTGCCGTTGCTCCAGGGCGAGAGCGTCGAGAGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGACTCGTCGCTCTGGCGGCCACCGAGATCATCACGGGCGCACCCTTCATC
AATGTGTAG-----------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G217900
CGAGCCACCTTGTTTGTTTGTTTGTTTGTTTGTTTAGTTAGAGA-AGAGAGGGGATTTTGTTTTGGTGTC--TTTGTGCT
CTTCAACTGTTCTTTTTAACCGGAATAAGCCTCAAATCTAACTTTGCATTGTGGGCTGCTATGCTGAAGCGGCCGCGACC
TTATTACAG-----------------------------------------------------------------------
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-------------TAATTATCACTGAAACT-GAGCAGTTCAAATCGGCAGAGGCTCTATTTTTTTCTTTTATCTCCTGAC
GACGAAAGATAACCC-----------------------------------------------------------------
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---------------------------------------CGTCGGGGCCTCGGTGCTGGGCTGATCTGGGCGT-------
--------AAGAGCAGTGGATCGGTTTCAACAGTCACTCGTGTCATTCATTCCCAATCCCTGGGTTTCAGCATGCAGTGC
GTCTTGGACGATAATGGAGCCAGTAATTAAGTTTGGCCG-----------------------------------------
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----------------------------------------------------AAATGAATATGCAAGTCTTGATTTATTT
ATTATTTGAACACGGCAAGGTCTTAATTTT---TAAGGCATTAGATCAAGAAAC-------------------------G
TATGAATGAAGATATGGTACAATGCAAAGAAGAAAGTTTTACCGGTGCTTTCCTGCCTGCA-AGGTTCCGCTTCCGCGTA
TGCAC-----ACACGTGTTCCTCTAAGATCTTTCCATTAGCTCGCGCTAGAAACAAAGCCCGAATTTTCCACAGTGCTGC
GCTTCTGGTCCCTA-----GGTGCTGGAGTCCTCGGATGC-TTCGCAACTTGT----GTGTCTGTTCGGCGTTTCCTGAA
GCTCTCCGCAGTCCGCACGGTGG------CCTCCACGTCCGCGTGGTCGCTCGGTCGCTCCACGTAAAGGGT-AA----T
TCACGGCCGGGAGCAGCCCGCGACGTGGGCACCGCCGCGGCCACCGCG------------CGCAGCTCGTCACGGTTT--
--GGCCCTCGCGGAGCA--CGGCCTATAAA-CTGTGCCCACTCTCTCGGAACAATACATC-AGCAAACACTCAACGACAC
TACAACAATCAGAA---------CTG---------CAATCATCT----------TTGCCTGTTGCAGCATCTGTAGCTTT
TTTCTGTCCTTTCGTGCACCTTCCGCCCGTCCGCGGCTGAGTAATGGCGACTGCG-ATGGCCATGAGCTCCTTCGCCGGT
---GCGGCCGTCCTGCCGTGCGGCTCGGCAGGC---CGCTTCGGCGCCAGGTCTCTGCCGGCATTGGGCCGCCGCACCCT
CATTGTCAGGGCACAGACCGAGGGCCCGAGCACACCACCGCCAAACAAACCCAAGGCGAGCACCTCGATCTGGGACGCGA
TGGCGTTCAGCGGCCCTGCCCCGGAGCGCATCAACGGCCGCCTTGCCATGGTAGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGACGTGGCGACGGACTCCTCTCGCAGCTCGGCAGTGGCACCGGGCAGGCATGGTTCGCCTACACCGTGGCGGTGCT
GACCATGGCGTCGTTGGTGCCGTTGCTCCAGGGCGAGAGCGTCGAGAGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGACTCGTCGCTCTGGCGGCCACCGAGATCATCACGGGCGCACCCTTCATC
AATGTGTAGAATAAACTAGCTTTGT--TGTCGACCGGTTAACACAACG--TGTACTTAG-----CTAGTAGGACATGTAA
ATGATGAGAATTGATCATCCTCGT-ATTCTTTGCAGTATATATTA---ATTAAAGACGGTCCATTTTTTTCTCACTCGAA
ATCTTCTTTATTATTTCTATTACTCTGTATGTTGACATAAATTCATCTTTCTACAGTCGAATGTTCGAGGAATTTTTGAT
AAAGTTTAATCCGGAAGAAGAGTAGATTAAACATGATTAATAACAGTACTTCCTCCGATCCATATTACTCCACGAAGAAA
CAAGAGACTTGCGAGTAGGGATGAAAGCCAGGAATCGACGGCGTGGCAGACGTGCGCGGCGGCTCTGGCAGTGGCACACG
AGGAAAGGTCGATTAGCACGTGCTGGTCTGGGTTTAACCCTAGATAGAGCAGGGCCTCCCTAGTTGTCACAACGACTCTG
GCAATGCTTTCCTCTTGCTATGCGGCGGTGGCGGCAACGAGCTCGTGCTGGCCTGGGCAGTGGCGAAGCTAGCAGCGAGC
TACGTCTAGGGCTGAGCAAGCTTGAACTCGAAATTCTTCATAATTTTCAGTACTTTGTAGAAAGGGATTACAAAGAATCT
TAGTACTAGGCCTAGGGCTATAGCTCTAGTTGTCCTAGGCTTGTCTCCGCCACTGGGCCTGGGCTTAACCCAAGGTAGAG
CAAGGCCTCCCTCGTTGCCGCATCAACTCTAGCAATATTTTCCTCTTGCTGTTCGGCGGCAGCTGACGCGGCTTCGAGCT
TGCATTCCTACACGTGCCTCCGGCCCTTCTTCCTCTTGGTCGACTGCACGGCCCGCTGCTCGTCCGTCAACGACTTCTTC
TTGGTCGGCGCCACCGTCTTGTGGGCTGCATGGGCTTGCCTTTGGCGGAAGCAGGCCGGAGGCGGCGTTGAGGATCGGCA
CGTTGTTCATGGCGAGCAGTCGGGAGCGTGAGCAGGCGGGAGTTTTTTGGAAAAGAGGGGAA
>chr5D_1
CGAGCCACCTTGTTTGTTTGTTTATTTTTTTCTTTATTTTTTATGAGAGAGGGGGACTTCTTTCTTTGGTGTTTTGTGCT
CTTCAACTGTTCTTTTTAACCGGAATAAGGCTCTAACT----TTTGCATTGTGGGCTGCTATGCTAAAGCGGCCGTGACC
TTATACTAAAATAAAGGAAAAGTATATTGTTCGTCCCTTAACTCTTTCAAGAATATTGAGATGATTCCTCAATTTCAAAA
TCAGCAAAACCAAGTCCCTCAATTTTCAAAAACGGATAAGTTTAGTCCCTGCCTCGGTCAAACCAGGTTTAGCTCTGACG
TGGCATGGTGAAAGCGATATCGGACAATATAGGTAAGCATAGCCGGCAGCGCTGCAGCCAGGGACGAACCCCACGGGTGA
GGCATGCCTCGTGCTTTTCCTGGAGCGTAGGCACAGGCGCTGGCTGCACCTCCCCGACACTCCATCCAATTGGAGACGAC
GGCGATTTGTGGTATGACGACAACGGTTGTGCTCCAGCATGTGGTGAGATGGAGGTGAGTTGTGGCAATGCGACGACTTC
CAGAGCAGGCATAGCAATGGCGGCTGCGGGTGCATCTATGGCAGCAGGTAGTGCAGTGCAGGGATAGGCAGTTCGGCATA
GGAGCCTCAGCCTCGCGGAGCCCCCGAGGTGCAGAGGCCGCTGCCGCGCTGGCCTGCTTGGCCGCAGACGCACGAGCCAG
CGACCTCCGCAATAGCTGTGTGCTGTTGGTGGGCCTGTGTTCTGATCCTCGTATCCACCCACAAGCATGATCCCCGCCCC
CTTCACGTTCGTCCTCAGGTGGACAAATTCACTGTTTTGACCCTTTTTCTTAACTTAAGCATAATTTGACCCTATGTGCA
AAAGTATTTCGAATCTGGCACTTTTTTTATCGTCATTGTCTTTGGCGGTAGGCTAGCACATCCTACCGCCAAGGCCTTTG
ACGATAGGACTTACTTACACCGTCATGCCCGTTCAGTGTGAAAAAGACCCTACGACCATGGTCTTTGGCGGTAGGGACAT
GCATATAAGTATAATAAGGGCACGCATGCAATAAAAGATTCATTTTTTGCGAAAAAGACTCTATCGCCATAGCCTATGGC
GGCAGGGTAACACATCCTACCGCCATATACTATGGCGATGGTAGGGTCTTTTTTGCAAAAATCAAAGATGACGATGCATG
TAAGTTCTACCGCCAAAGACCTTGGTGGTAGGATGTGTTAGCTTACCGTCAAAAACAATAACGTTAGGAAAATGGTCAGA
TCCGAAAAACTTTTGCACGTATGGTCAGATCATGCTAAACTAACGACAAAATAGTGAATTTGGCCTCCTCAAGTTGCTAC
CTGGAGCATGTACCATACACGGCCTCGTCTACATGTCCCGTTTGACGCGTGGTGTCCACTGAGGCAGCCGCCATGCAGGG
TCACGAGGAGCAGGCACTGCATGCTGCCTTGACGGAGAGCTAGATACGACGACTCGACGAGGTGTGCGAGGCTGGCGGCG
GCGATATATGTAGAGGACGCAGGCAAACTGTTCGCGGGCTAGGCTCCCGGGGAGCTGTTGTGCGTTGAGGCGCGCAGGAC
AGCCCACAACGGGGGTTCCGTTGACGGTGGCAAGGTGAACGTGCAGACTTTGCTGGTCAATTTTTTTTAGGGAAACTTTG
CTCGTCAATTGATTGTTGAAATTTCCGCACTATAGATAGATGAGAGAGACAAGACTGGTCAAAACTTGTTTTAATCAAAA
TCGTGTCCCAAACCGGTATGAGGGACTAAACACATCCGATTTTAAAAGTTGAGGGGCTAAAAATATCCAGTTTAAAAAAT
TAAGGAACTAAAGATTATCGGTTTTAAAGTTTAGGAATCATTTCTATATTTTTAAAAGAGTCGAGGGACGGAAAATATAC
TTTTCCCTTGAAATAATTATCACTTAAACTAGAGCAGCTCAAAGCGTTAAAG------TTTTCTTTTATTATCTGTCGAC
GACGAAAGATAAGAGCATCTCTAGCCGCGCCTTCAGGGAGGCCTCCCCAGGCGATTTTTTCGCGCCGGCGCCGAAAAACG
GCCCACTCGTGCCCCAGGAGCCCGATTTTCGCCGGCCTGGGCCGAAATCAGCACCGGCGGACCCAGGCCGAACCCGGCGC
GCTGGGGGCGCCGGGGCAAGCGGTTTTGGCGCTTGGGGGCGTCGGGGCCTCGGTGCTGGGCTGATCTGCACTCTGGATAG
CTTGCGCCAAGAGCAATGGATCGGTTTCAATAGTCGCCCGTGG---TCATTCCAAATCCCTG--------------CTGC
GTCTTGGACGACAATGGGGCCAGGAATTGAGTTTAGCCAAAAAGAATAGGGCGGTACTCTGCGCCTTGGGCCGGTGCGCT
GCTGAGCGTTGGATGCGTACGCGTGAATGGATGAGATTGTTGCGACCAAGTCATCTTCTTCCTCCCGCACGCACGTGTAA
AGACAGGGAAAAAAGGATCTCGTCGTCGCAGCTCGCCGGCGCCGCTCGTGCTCGCCCTTGGCCGCCACATCGCAGCTCGC
CGCCGCCTCTCACCGTCGCAGCTCGCCGGGGGCACTTGCCATATGCAGCTCCACCGGGTTGGTCGAAAGAAAGACGTCCC
TTGCTCCGCTGGGCCGGGCGTGTCTCCCTCCCTCTGGTTGCAGCATCGCCGGGTGAGGGTTCCAGCATTGTCGCAGCCCG
CCGTCGCAGCACCGCGCGCCATGCAGCTCCGTCGCCGCTGCTCGCCATTGTTAGCTAGCCGTTCTCGGTTTGAAGCTTTT
TTAGAAGCACGTTGTAGCTTTCCTCCACGCCGGTTGCAGCTTTTTGCCGCTGCGCGATGCTGACCTCCAGCTACCCCCGT
ATCCAGTTGAAGCTTTTTTCAAAGCTGGTTGTAGCTTTCCTGGTTGCCGGAAGTAGCATTTTTCAGCACTGGTTATAGCT
CTCACGTACATCCATCGAAGCCCCTGCTTCCTTTGATTCCAGCAAAATATGTTGTTGGTTCCAGCTCTGGATTTGCTGGT
TGTAGCAAAAACAAAAGCTGGTTCCAGCTCTGGCTTTGCCAGGACAAAAATCATTTGCTGGAAAAGCCATTGCTGGTCGC
TGCTTCCGCCAGTCGCCGTGGTAGCAAAAAATCTTGCCGGTAGAAGCTTCTGCCTTGTCGTTTGCAACAAAAGGAGGCGA
CCGCGAATGTCGACGTAGAAAACACTCCAGGCGATGCACCAAAACTAAGTGCCGGTTCCAGCTCTGGGTTTGTCGGTTGC
AGCAAAATCAGACGCCGGTTCCAGCATCACCTGTGTCGTGGGTGTGCCTCGCCGTCGCAGTTATGCAGCTCGTCTGCCGG
AGCTGGGGGATTGCTGGAGTTGGAGACGGTGCGCTAGGAGAATAGCCGGAGCTGCGGATAAGAGGTGCTCGTGCGTGTGG
GGAAATTGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGGGG
AAGGGGGGGTAAACGGCGCCTCGCCGGGGCCGCTCGTCGTCATAGCGGGTGGGGCGGGAGAGAAAACAGGAGCGCGTGGT
AGCGGCCGACCGGCCGAAGCTTCGGCCAGCGCACCGTCCCTAAACGTTTACCAAAAGAATATGCAAGTCTTAATATATCT
TTT---TGAACACAGTAAGGTCTTAATCTT---TAAGGCGTTAAATCAAGAAAGTACGCATGATTCCCTCAAATAAAAAG
TATGCATGATGGGATGGCACAATACGAAGAAGAAAG-TTTACCTGAGCTTTCCTGCCTGCAAAGGCTCCGCTTCCGCGTA
TGTAC-----ACACGTGTTTCTCTAAGATCTTTCCATTAGCTCGCGCTAGAAACAAAGCCCGAATTTCCCACGGTGCTGC
GCTTCTGGTCCGTA-----GGTGCTGGAGT--------GC-TTCGCAACTTGG----CAGCCTGTTTGGCGTTTCCTGAA
GCTCTCCTCAGTCCGCACGCTGG------CCTCCACGTCCGCGTGGTCGCTCGGTCGCTCCACGTAGAGGGT-AA----T
TCACGGCCGGGAGCAGCTCGCGACGTGGGCACCGCCGCGGCCACCGCG------------CGCAGCTCGTCACGGGTT--
--GGCTCTCACGCAGCA--CGGACTATAAA-TTGTGCCCGCTCTCCCGGAACAATACATC-AGCAAACACTCAGCGACAC
AACAACAATCAGAA---------CTGTACTACTAGCAACCATCT----------TTGCCTGTTGCAGCATCTGTAGCTTT
TTTCTGTTCTTTCGCGCACCTT----CCGTCCGCGGCTGATTAATGGCGACCATG-ATGGCCATGAGCTCCTTCGCCGGT
---GCCGCCGTCCTGCCGCGCGGCTCGGCCGGC---CGCTTTGGGGCCCGGTCTCTGCCAACGCTGGGCCGACGCGCCCT
TGTCGTCAGGGCACAGACCGAGGGCCCGAGCGCACCACCGTCAAACAAACCCAAGGCGAGCACCTCGATCTGGGACGCGC
TGGCATTCAGCGGCCCTGCCCCGGAGCGCATCAACGGGCGGCTGGCCATGGTGGGCTTCGTGACGGCACTTGCGGTGGAG
GCAGGGCGTGGCGACGGGCTCCTCTCGCAGCTCGGCAATGGCACCGGGCAGGCGTGGTTCGTCTACACCGTGGCGGTGCT
GTCCGTGGCGTCGCTGGTGCCGTTGCTCCAGGGCGAGAGCGCTGAGGGTAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGACTCGTCGCGCTCGCCGCCACCGAGATCATCACTGGCGCGCCCTTTATC
AACGTGTA----AA-CTAGCTTTGTTGTCTCGACCGGATAGCCCAATC--TGTACTTAGCTATAGTAGTAGGACATGTAA
ATGATGAGAGTTGATCAACCTTGT-ATTCTTTGTACTACTATT-A---ATTAAAGAC-----------------------
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>chr5A_274
CTG-----------------------------------------------------------------------------
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--TGCGTCAAGAGCAATGGATCGGTTTCAACAGTCACCCGTGTCATTCATTCCCAATCCCTGGGTTTCAGCATTCACTGC
GTCTTGGACGATAATGGAGCCAGGAATTGAGTTTATCCG-----------------------------------------
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----------------------------------------------------AAATGAATACGCAAGTCTTATTATATCT
TTC---TGAACACGGTAAGGTCTTAATTTTTTGTAAGGCATTAGATCAAGAAAC-------------------------G
TATGCATTAGATC----------------AAGAAAG-TTTACCGGTGCTTTCCTGCCTGCAAAGGCTCCGCTTCCGCGTA
TGCACACACAACACGTGTTTCTCTAAGATGTTTCCATTAGCTCGCGCTAGAAACAAAGCCCGAATTTAACACGGTGCTGC
GCTTCTGGTCCGTACCGTAGGTGCTGGAGTCCGCGGATGCTTCCCAACTTTTCTAGAGTATCTGTTTGGCGTTTCATGAT
GAAGC---------------------------CCTTGTCCGCACGTCCGCTACCTCGCTCCACGTAGATGGTAACC----
-CACGGCCGGGAGCAGCTCGCGACGTGGGCACCGCCGCGGCCACCGCG------------CGCAGCTCGTCACGGGTT--
--GGCTCTCGCGGAGCACACGGCCTATAAA-CTGTGCCCCCTCTCTCGGAACAATACATCAAGCAAACACTCAGCGACAC
AACAACAATCAGAA--------ACTGTACTA---GCAATCATCTAGCCGATTCCTTGCCTGCTGCAGCATCTGTAGCTT-
------------------CCTT----CAGTCCGCGGCTGATTAATGGCGACCATG-ATGGCCATGAGCTCATTCGCCGGT
---GCCGCCGTCCTGCCGCGCGGCTCGGCAGGC---CGCCTCGGCGCCAGGTCTCTACCAGCGCTGGGCCGGCGCGCCCT
CGTCGTCAGGGCCCAGACCGAGGGCCCCAGCGCACCACCGTCAAACAAACCCAAGGCGAGCACCTCGATCTGGGACGCGC
TCGCATTCAGCGGCCCTGCGCCGGAGCGCATCAACGGACGCCTTGCCATGGTAGGCTTCGTGACGGCGCTTGCAGTGGAG
GCAGGCCGCGGCGACGGGCTACTCTCGCAGCTCAGCAGCGGCACCGGGCAGGCGTGGTTCGCCTACTCTGTGGCGGTGCT
GTCTGTGGCGTCGCTGGTGCCGCTGCTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCACCATCATGAACGCAAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCTCTGGCGGCGACCGAGATCATCACTGGCGCACCCTTCATC
AACGTGTA----AAACTAGCTTTGT--TGTCGACCGGATAACACAACT--TATACATAG-----CTAGTAGGACATGTAA
ATGATGAGAACTGATCATCCTCTT-ATTCTTTGCAGTATATACTA---AT------------------------------
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>chr5D_534
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--------------------------------------------------------------AGGTTCCGCTTCCGCGTA
TGTACACACGACACGTGTTTGTCTAAGATCTTATCAGTAGCTCGCGCTAGAAACAAAGCCCGAATTCCGCACGGTGCTGC
GCTTCTGGTCCGTA-----GGTGCTGGAGTCCTCGGATGCTTTCGCAACTTGT----CAGTCTGTTTGGCGTTTCCTGAA
GCTCTCCGCAGTCCGCACGGTGG------CCTCCACGTCCGCGTGGTCGCTGGCTCGCTCCACGTAGAGTGTAAA----T
TCACCGCCGGGAGCAGCTCGCGACGTGGGCACCGCCGCGGCCAGCCGGCCACCGCGCACACGCAGCTCGTCACGGGTT--
--GGCTCGCGCGGAGCAC--GGCCTATAAAATTGTGCCCACTCCCTCTGAACAAAACATCAAGCAAACACTCAGCGACA-
-----------------------------TA---GCAATCATCT----------TTGCCTGTTACAGCATCTGTAGCTTT
TTTCTGTCCTTTCGT-CACTTT----CCGCCCGCGGCTGATCAATGGCGACTGTG-ATGGCCATGAGCTCCTTGGCCGGT
GCCGCCGCCGTCCTGCCGCGCGGCTCGGCAGGC---CGCCTCGGCGCCAAGTCTCTGCCAGCGCTGGGCCGGCGCGCCCT
CGTCGTCAGGGCCCAGACCGAGGGCCCCAGCGCACCACCGCCAAACAAATCCAAGACCAGCACCTCGATTTGGGACGCGC
TGGCGTTCAGCGGCCCTGCGCCGGAGCGCATCAACGGACGCCTTGCCATGGTTGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGCCGCGGCGACGGGCTCCTCTCCCAGCTCGGCAGTGGCACCGGGCAGGCGTGGTTCGCCTACTCTGTGGCGGTCCT
GTCCGTGGCGTCGCTGGTGCCACTGCTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGGTTGGACTCGTCGCTCTGGCGGCCACCGAGATCATCACGGGCGCACCCTTCATC
AATGTGTA----AAACTAGCTTTGT--TGTCAACCGGATAACACAATG--TGTAGTTAG-----CTAGTAGGACATGTAA
ATGATGAGAACTGATCATCCTCGT-ATTCTTTGTAGTAGTATT-ACTAATTAA---------------------------
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>chr5B_661
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---------------------------------------C-TTCGCAACTTGT----CTATCTCTTTGGCGTTTCCTGGA
GCCC-------TCCGCACGGTGG------CCTCCACGTCCGCGTAGTCGCTGCCTCGCTCCACGTAGAGGGT-AA----T
TCATGGCCGGGAGCAGTTCGCGACGTGGGCATCGCCGCGGCCACCGTG------------CCCACCTCGTCACGGGTT--
--GGCTCTCGAGGAGCAC--GGCCTATAAA-TTGTGCCCACTCTCTCGGAACAATACATCAT-CAAACACTCAGCGACAC
AACAACAATCAGAA---------CTGTACTA---GCCATCATCT----------TTGCCTGTTGCAGCATCTGTAGCTTT
TTTCTGTCCTTTCGTGCATCTT----CCGTCCGCGGCTGATCAATGGCGACTGTG-ATGGCCATGGGCTCCTTCGCCGGT
---GCCGCCGTCCTGCCGCGGGGCTCGGCTGGC---CGCTTCGGCGCCCGGTCTCTGCCAGCGCTGGGCCGACGCACCCT
CATCGTCAGGGCACAGA------------------------CAAACAAACCCAAGACGAGCACCTCAATCTGGAACGCGC
TGGCGTTCAGCGGCCCTGCGCCGGAGCGAATCAACGGGCGCCTTGCCATGGTAGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGGCGCGGCGACGGGCTCCTCTCGCAGCTCGGCAGTGGCACCGGGCAGGCGTGGTTCGCCTACTGTGTGGCGGTGCT
GTCCGTGGCGTCACTGGTGCCGTTGCTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCGCTCGCCGCCACCGAGATCATCACCGGCGCGCCTTTTATC
AACGTGTA----AA-CTAGCTTTGTTGTCTCGACCGGATAACACAACC--TGTAGCTAG---TACTAGTAGGACATGTAA
ATGATGAGAGCTGATCATCCTTGT-ATTCTTTGCAGTACTACT-A---ATTAAAGACTGTTCAT----------------
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>chr5D_661
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---------------------------------------C-TTCGAAACTTGT----CTATCTCATTGGCGTTTCCTGGA
GCCC-------TCCGCACGGTGG------TCTCCACGTCCGCGTAGTCGCTGCCTCGCTCCACGTAGAGGGT-AA----T
TCATGGCCGGGAGCAGTTCGCGACGTGGGCATCGCCGCGACCACCGCG------------CGCAGCTCGTCACGGGTT--
--GGCCCTCGCGGAGCAC--GGCCTATAAA-TTTTGCCCACTCTCTCGACACAATACATCAT-CAAACACTCAGCGACAC
AACAACAATCAGAA---------CTGTACTA---GCAACCATCT----------TTGCCTGTTGCAGCATCTGTAGCTTC
CTTCTG----------CGCCTT----CCATCCACGGCTGATTAATGGCTACTGTG-ATGGCCATGAGCTCCTTCGCCGGT
---GCCGCCGTCCTGCCGCGGGGCTCGGCCAGC---CGCTTCGGCGCCCGGTCTCTGCCAGCGCTGGGCCGACGCGCCCT
CGTCGTCAGGGCACAGACCGAGGGCCCGAGCGCACCACCGCCAAACAAACCCAAGGCGAGCACCTCCATCTGGGACGCGC
TGGCGTTCAGCGGCCCTGCGCCGGAGCGCATCAACGGACGGCTGGCCATGGTGGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGCCGTGGCGACGGGCTCCTCTCGCAGCTCGGCAGCGGCACCGGGCAGGCGTGGTTCGCCTACACCGTGGCGGTGCT
GTCCGTGGCTTCGCTGGTGCCGCTGCTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCGCTCGCCGCCACCGAGATCATCACCGGCGCTCCTTTTATC
AACGTGTA----AA-CTAGCTTTGTTGTCTCGACCGGATAACACAACC--TGTAGCTAG---TACTAGTAGGACATGTAA
ATGATGAGAGCTGATCATCCTTGT-ATTCTTTGCAGTACTACT-A---ATTAAAGACTGTTCAT----------------
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>chr5D_661
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---------------------------------------C-TTCGCAACTTGT----CTGTGTGTTTGGCGTTTCA--GA
GCCC-------TCCGCACGGTGG------CCTCCACGTCCGCGTAGCCGCTGCCTCGCTCCACGTAGAGGGT-AA----T
TCACGGCCGGGAGCAGCTCGCGACGTGGGCACTGCCGCGGCTACCGCG------------CGCGGCTCGTCACGGGTT--
--GGCTCTCGCGGAGCAC--GGCCTATAAA-TTGTGCCCGCTCTCTCGAAACAACACAACAA-CAACCAGA---------
----------------------ACTGTACTA---GCAATCATAT----------TTGCCAGTTGCAGCATCTGTAGCTTT
TTTCTTTCTATTCGTGCACCTT----CCGTCCCCGGCAGATTAATGGCGACTGTG-ATGGCCATGAGCTCCTTCGCCGGT
---GTGGCCGTCCTGCCGCGGGGCTCAGCTGGGCAGCGCTTCGGCGCCCGGTCTCTGCCGGCACTGGGCCGACGCGCACT
CGTCGTCAGGGCACAGGCCGAGGGCCCGAGCGCACCACCGCCAACCAAACCCAAGGCGAGCACCTCGATCTGGGACGCGA
TGGCGTTCAGTGGCCCTGCGCCGGAGCGCATCAACGGGCGGCTGGCGATGGTGGGCTTCGTGACGGCGCTCGCGGTGGAG
GCAGGCCGCGGCGACGGGCTCCTCTCACAGCTCGGCAGCGGCACCGGGCAGGCGTGGTTCGCCTACACCGTGGCGGTGCT
GTCCATGGCATCGCTGGTGCCTTTGCTCCAGGGCGACAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGACGATTCGCCATGCTCGGCCTGGTCGCTCTGGCGGCAACGGAGATCATCACTGGCTCGCCCTTCATC
AACGTGTA----AAACTAACTTTAT--TGTCGACCGGATAACACAACC--TGTACTG---------AGTAGGACATGTAA
ATGATGAGAACCGATCATCCTCGT-ATTCTTTGTAGTACTAATTA---A-------------------------------
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>chr7A_667
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----------------------------------------------AACTTCT----CTGTCTGTTTGGCCTTTCATGGA
GCGC-------TCCGCACGGTGGCCTCCACCTCCACGTCCGCGTACTCGCTGCCTCGCTCCACGTAGAGGGT-AA----T
TCACGGCCGGGAGCAGCTCGCGACGTGGGCACCGCCGCGGCCACCGCG------------CCCGGCTCGTCACGGGTTGG
CTGGCTCTCGCGGAGCAC--GGCCTATAAA-TCGTGCCCGCTCTCCCTGAACAATACATCAG-CAAACACTCGGCGACAC
AACAACAACAACAACAAGCAGCACTGCACTA---GCAATCATCT----------TTGCCTGTTGTAGCTTCTGTAGCTTT
TTTCT--CCTTTCGTGCACCTT----CCGTCCGCGGCTGATCCATGGCGACTGTG-ATGGCCATGAGCTCCTTCGCCGGC
---GCGGCCGTCGTGCCGCGCGGCCCGGCCGGC---CGCCTCGGCGCCAGGTCTCTGCCAGCGCCGGGCCGCCGCGCCCT
CGTCGTCAGGGCACAGAGCGAGGGCCCGAGCGCACCACCGCCGAACAAACCCAAGG------------------------
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>chr5B_708
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-----------TCCGCAGGTTGG------CCTCCACGTCCGCGTACTCGCTGCCTCGCTCCACGTCGAGGCT-ATTCATT
TCACGGCCGGGAGCTGCTCGTGACGTGGGCACCGCCGCGGCCACCGCG------------GCCACCTCGTCACGGGGT--
--GGCCCACGCGGAGCAC--GGCCTATAAA-TTGTGCCCACTCTCTCGGAACAATACACCAG-CAAACACTCCGCGACAC
AC-----------ACGAACAGCAAG----TA---GCAATCATCTAGCCGATTCTTCCCTTCT------------------
CTCCTT----------CGTCCA----CCTTTCGTGTCTGATTAATGGCAACCATGAGTGACCATGAGCTCCTTCGCCGGT
---GCGGCCGTCCTGCCGCGCGGCTCGGCTGGA---CGCTTCAGCGCCCAGTCTCTGTCAGCGCTGGGCCGACGCGCTCT
CGTCGTCAGGGCACAGACCGAGGGCCCCAGCGCACCACCGCCAAACAAACCCAAGGTGAGCACCTCGATCTGGGACGCGC
TGGCGTTCGCCGGCCCCGCGCCGGAGCGCATCAACGGGCGGCTGGCCATGGTGGGTTTTGTGACTGCGCTCGCCGTGGAA
GCAGGCCGTGGCGACGGGCTCCTCTCGCAGCTCGGCAGCGGCACCGGGCAGGCGTGGTTCGCCTACTCCGTGGCGGTGCT
GTCCGTGGCGTAGCTGGTGCCGCTGCTCCAGGGCGAGAGCACCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGCCTCGTCGCGCTCGCCGCCACCGAGATCATCACTGGCGCGCCCTTCATC
AACGTGTAGAATAAACTAGCTTTGT--TCTCAACCGGATAACACCACG--TGTACTTAGCTAGT----------------
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>chr5A_748
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---------------------------------------------------------CTCCACGTAGAGGAT-ATTCATT
TCACGGCCGGGAGCTGCTCGCGACGTGGGCACCGTCGCGGCCACCACG------------GCCACCTCGTCAGGGGTT--
--GGCTCGCGGGGAGCGT--GGCCTATAAA-TTGTGCCCACGCACTCAAAACATTACACCAG-CAAACACTCGGCGACAC
AC-----------ACAAACAGCAAG----TA---GCAATCATCTAGCCGATTCTTCCCTTCT------------------
CTCCTT----------CGTCCA----CCTTCCGCGGCTGATTAATGGCAACCATG-GTGACCATGAGTTCCTTCGCCGGT
---GCGGCCGTCCTGCCGCGCGGCTCGGTTGGT---CGCTTCGGCGCCCTGTCTCTGCCAGCGCTGGGCCGATGCGCCCT
CGTCGTCAGGGCACAGACCGAGGGCCCCAGCGCACCACCGCCAAACAAACCCAAAGCGAACACCTCGATATGGGGCGCGC
TGGCATTCAGTGGCCCTGCGCCGGAGCGCATCAACGGGCGCCTTGCCATGGTAGGCTTCGTGACGGCGCTTGCGGTGGAG
GCAGGGCGCGGCGACGGGCTCCTCTCGCAGCTCGGCAGTGGCACCGGGCAGGCGTGGTTCGCCTACTCCGTGGCAGTGCT
AACCGTGGCGTCGCTGGTGCCACTACTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGG
AGCTCTGGAACGGCCGCTTCGCCATGCTCGGACTCGTCGCACTCGCGGCCACCGAGATCATCACCGGCGCGCCTTTTATC
AACGTGTA----AA-CTAGCTTTGTTGTCTCGACCGGATAACACAACATATGTAGCTAG---TACTAGTAGGACATGTAA
ATGATGAGAGCTGGTCATCTTTCAAATTCTTTGTAGTGCTTAT-ACTAATTAAAGA------------------------
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>SNPs
-----------------------S---S---S----S--SSSSS----------SSS--S---SSS--SS----------
-----------------------------S---S--SSSSSS-----------------------S---------S----
----SSS-S-----------------------------------------------------------------------
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------------------------S------------S-----S--SS-S--SSSSSS----S--S-S------SSS---
------------SSS-----------------------------------------------------------------
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--------------------------------------------------------------------SS-SS-------
---------------S---------------------S-----------------------------------S--S---
-----------------------S----S-----S---------------------------------------------
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-----------------------------------------------------------------------S--S---S-
S--SSS---------S----------------------------------------------------------------
----S----S-SS----S-----S-S----------S-------------------------------------------
-------------------S-----------------------------------------------S----S-------
-----------S------------------------------------------------------S-------------
------------------------------------------------------------------S-------------
-----------------S---------------------------------------------------------S----
-------------------------------------------------------------------------S------
S-------------------------------------------------------------------------------
----------------------SSSS--------------S------------S--------------------------
------------------S--------------------------------------------S----------------
---S---------------------------S------------------------------------------------
-------------------------------------S------------------------------------------
-----S-----------S-----------------------------------S--------------------------
-------------S---------------------------S----S---------------------------------
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-------------------------------------S------------------------------------------
---------------------------------------------------------S--S---SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1975
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-----------------------------------AGTTCAAATCGGCAGAGGCT-------------------------
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>reverse_5827
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------------------------------------------------------------------AACCCAAGGTAGAG
CAAGGC--------------------------------------------------------------------------
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