>input_sequence_77603
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----------------------------------------ATGGCGACCACGTCGACCACCCCGTTCCACCGTCTCCTCG
CCCCGGCCCGGTCGAACCCCGCTGCGCGCCTCTCCCTCTACACCCGCGGCCCTCCCACGCTCTCCTTCTCCCGCTCCATC
TCCGTCCGCCGACGTCTCGCTGCCGCATCCAAGGACACCGCCAGCGACAAGGGGCAAGAACAAGAATCGTCCACGGTAGC
GGGCGGAGCCGCGGAGCCCGCAGAGGAGGAAACACCTCCGGGTGAAAAGACCTCAGATGAAGTGGCGACGGAGCTTAAGG
AGGTGATGCGTGCGCGTAAGGAGGCGGAGGTCGCCGCAGGCGGCGGTGGGTGGTGGGCCGGGGTGGCGCAGGAGATGACG
GAGATCGAGTGGCCGGCGCCGGGGAAGGTTCTGGGCACCACGGGGGTCGTCCTCGGGATCATCGCGGGATCCACGGTCGC
CCTGCTCTCCGTGAACGCGATCCTCGCCGAGCTCTCCGACCGTGTCTTCGTTGGCCGGGGCCTTCAGGATTTCTTCTAA-
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>chr2A_1_TraesCS2A01G272500
ATAATCCATGGATGAATTACCTAAAACATCAGGGGGTTTTCTAAAAATGTAAAATAACGGTTCGGGTGTGACTTAAATCC
GAACGGCAGGTTAATTTTAAGAAAAGACAGAGACTTTTATGTAAAATAGGAAAATAACGATTCGTTTCAACTTAAAACAG
GATCGCGGGTTGAATTCTCTGAAATAGAGAGGCTTTTCCGAAAAATGCCATGATGGATGAAAGAAATCCAATTTGCTTTA
TTATTAGGTAAAGATAGGCCTGATCCTTTCGCCTAATATTGAGCGAGAAGGGAGCCAATAACGACCAATTTGAAAGGGAA
CAACTAGTACAACTTATCCTGACAAAAATAGTCTTCGCCTGCAAAAGGCTCTGGTGATGACACCGTCTTAGGCTCCATGG
TGACCTCCGCCTTGTCGTCCTACTGGTCTTGGTCTCGTTGCATCGATATGGAAACATTTGCTTGATGCCTCGGTACTTCG
GGCCTGCGCTTGCTCACTTGGCACCAAAGAGGAAGCAAGGACGCTACATGCGTTGGCGCCCGCCTGGTCTCGATCGTCAT
GGCTCACGTCACGAGGACCTCGCGAGATTTGCCTTGTCTTGAATACCTCGTCGATGAAGATGGGCCGTACAGACCTGCTA
GCTCAGTCACGCCGTGGGCCGCAAGCAGGCAAGTCAAGGGACCTCCGTTCACGGAATGCCGATAATGTCCACTTTCAATT
TTTTCCTTTTTGATGAACTGATGACAAATACACAAAATTATAGTTTTTTTTTAAAAAAAATACAAAGATTCATATTGGAA
TTTCTAAATTTGAGGAAAGGAGTCGAGTTTCACGGCGTTGGCTTCTGTTGCCCCTGGACTGCGCCCAAACGTCCGATTTA
TATCAGACGGTTCCTATGGGCGCGTGGCTCGGCAGGGGATTCGATCCATTCCCTTTGTGTCTTATCTCCGGCGCAGAGAA
GCCTCCAGCTCCGGCCGCTGAGCCAACCAAAACGGAAGCCATGGCGACCACGTCGACCACCCCGTTCCACCGTCTCCTCG
CCCCGGCCCGGTCGAACCCCGCTGCGCGCCTCTCCCTCTACACCCGCGGCCCTCCCACGCTCTCCTTCTCCCGCTCCATC
TCCGTCCGCCGACGTCTCGCTGCCGCATCCAAGGACACCGCCAGCGACAAGGGGCAAGAACAAGAATCGTCCACGGTAGC
GGGCGGAGCCGCGGAGCCCGCAGAGGAGGAAACACCTCCGGGTGAAAAGACCTCAGATGAAGTGGCGACGGAGCTTAAGG
AGGTGATGCGTGCGCGTAAGGAGGCGGAGGTCGCCGCAGGCGGCGGTGGGTGGTGGGCCGGGGTGGCGCAGGAGATGACG
GAGATCGAGTGGCCGGCGCCGGGGAAGGTTCTGGGCACCACGGGGGTCGTCCTCGGGATCATCGCGGGATCCACGGTCGC
CCTGCTCTCCGTGAACGCGATCCTCGCCGAGCTCTCCGACCGTGTCTTCGTTGGCCGGGGCCTTCAGGATTTCTTCTAAG
GGTGAAGTGGCATCAATTTGTCTCCGTTTATATTTCGAGAATTCAGATAGGCGTATTGCAAGGTTCATAGATTGAAAATG
GCTGTGTTGCTGCAAGAGAAATATGATATGCTGTTCCGCAGACAATTGCATTGTGCTAACCTGTGCGTGCGATTCAGTCT
TCGGGAAAGAGTTTTGGCTGGCATTTCTGTGCT-AACTACTCTTACTCCGAGAAGAGAAACCTAGCTGAGTTTCTACTTA
TGTCAGTAGCACAAAGTAAAGCTGGTTAATTTATACTTGATAAAACTGATAAACTTACTTGCACTTGGCAATATTTTCTA
TTTAGTGTAGTGATTTGCTAAAGCTACATTTCTCATCCACAAAACA-TTTAGCTTAAGTTGTAACCACGACTAGGGAACA
CCCTA---------------------------------------------------------------------------
-----------------ATCTATCTTGTGAACCCAAGTGTATGGCCATTCTTATCTACAACCTCATTCCCGAGCAGTGAC
ATTCACAGGCAGATGATGCAATTCTTCATGACATACATGTATATTGGGTATTGATTTTCGGTGTTGGTTCCAGATCATTC
ATATTCCTTGGGTTGTCAGAATATATGGTTTTGAAGATAGAATCGCCTCTCCCGACCATGGCTGATATGTATGGCTTGGT
ATGGATTGGT-CCTGCTCTTTTTCTATGATCATGACATACATGTATATTGGGTATTACATTTGGGTGTTATTCCTGTGTG
TTTTGGTACGGTATAGGTTCAGCTATTGGTCGTGACATGGACAAATTATTTTTCATCGATATGCAAACTGTTGAGTATAT
TGTGTACGTGTATATGTGTGTGTAGGGCCCACCTCCTGTATTCCTTGTATAGTTGAGGTTGTGGCCCACCTCTGTACTTA
TATATACGTGCCTGGTGCACCGATCAATACATTGCGATTGCATAGCCCATAACCTATCTCTCTACATGGTATCTATCGCA
GCAAGGTCCTAACCCTAGCCGCCGCCGCCGCCGCACCTCCGCGCCGTCGCCGCC
>chr2D_708
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-------------------------------------------------------------------TCCACTTTCAATC
TTCTCCTTTTTGATGAACTGATGATAAATACACAAAATTATAGTTTTTTTT-------AATATAAAGATTCATATTGGAA
TTTCTAAATTTGAGGAAAGGAGTCGAGTTTCACGGCGCTGGCTTCTGTTGCCCCTGGACTGCGCCCAAACGTCCGATTTA
TATCAGACGGTTCCTATGGGCGCGTGGCTCGGCAGGGGATTCGATCCATTCCCTTTGTGTCTTATCTCCGGCGCAAAGAA
GCCTCCAGCTCCGGCCGCTGAGCCAACCAAAACGGAAGCCATGGCGACCACGTCGACCACCCCGTTCCACCGTCTCCTCG
CCCCGGCCCGGTCGAACCCCGCCGCGCGCCTCTCCCTCTACACCCGCGGCCCTCCCACGCTCTCCTTCTCCCGCTCCATC
TCCGTCCGCCGACGTCTTGCTGCCGCATCCAAGGACACCGCCAGCGACAAGGGGCAAGAACAAGAATCGTCCACGGCAGC
GGGCGGAGCCGCGGAGCCGGCAGAGGAGGAAACACCTCCTGGTGAAAAGTCCTCAGATGAAGTGGCGACGGAGCTTAAGG
AGGTGATGCGTGCGCGTAAGGAGGCGGAGGTCGCCGCAGGCGGCGGTGGGTGGTGGGCCGGGGTGGCGCAGGAGATGACG
GAGATCGAGTGGCCGGCGCCGGGGAAGGTTCTGGGCACCACGGGGGTCGTCCTCGGGATCATCGCGGGATCCACGGTCGC
GCTGCTCTCCGTGAACGCGTTCCTCGCCGAGCTCTCCGACCGTGTCTTCGCTGGCCGGGGTCTTCAGGATTTCTTCTAAG
GGTGAAGCGGCATCAATTTGTCTCCGTTTATATTTCGAGAATTCAGATAGGCGTATTGCAAGGTTGATAGATTGAAAATG
GCTGTGTTGCTGCAAGAGAAATATGATATGCTGTTCCGCAGACAATTGCATTGTGCTAACCTGTGCGTGCGATTCGGTCT
TCGGGAAAGAGTTTTGGCTGGCATTTCTGTGTT-AACTACTCTTACTCCGAGAAGAGAAACCTAGCTGAGTTTC----TA
TGTGGGTAACACAAAGTAAAGCTGGTTAATTTACTCGGA--AAAACTGATAAACTTACTTGCACTTGGCAATACTTTCTA
TTTAGTGTAGTGATTTGCTAAAGCTACATTTCTCATCCACAAAACA-TTTAGCTTAAGTTGTAACCTC----AGGGAACA
CCCTA---------------------------------------------------------------------------
-----------------ATCTATCTTGTGAACCCAAGTGTATGGCCATTCTTATCTACAACCTCATTCCCGAGCAGTGAC
ATTCACAGGCAGATGATGCAATTCTTCATGACATACATGTATATTGGGTATTGAATTTCGGTGTTGGTTCCAGATCATTC
ATATTCCTTGGGTTGTCAGCATATATGGTTTGGAAGATAGGATCGCCTCTCCCGACCATGGTTTATCTGCATGGCTTGGT
ATGGATTGCTCCCTGCTCTTTTTCTATGATCATGACATACATGTATATTGGGTATTAGATTTGGGTGTTATTCCTGTATG
TTTTGGTATGTTATAGGTTCAGCTATTGGTCGTGACATGGACAAATTATTTGTCATCGATATGCAA--------------
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>chr2B_710
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---------------------------------------------------------------------CACTTTCAATC
TTCTCCTTTTTGATGAATTGATGATAAATACACGAAATTATAGCTTTTTTTTAAGAAAAATACAAAGATTCATATTGAAA
TTTCTAAATTTGAGGAAAGGGGTCGAGTTCCACGGCGTTGGCTTCTGTTGCCCCTGGACTGCGCCGAAACGTCCGATTTA
TATCAGACGATTCGTAGGAGCGCGTGGCTCGGCAGGGGATTCGATCCATTCCCTTTGTGTCTTATCTCCGGCGCAAAGAA
GCCTCCAGCTCCGGCCGCTGAGCCAACCAAAACGGAAGCCATGGCGACCACGTCGACCACCCCGTTCCACCGTCTCCTCG
CCCCGGCCCGGTCGAACCCCGCCGCGCGCCTCTCCCTCTACACCCGCGGCCCTCCCATGCTCTCTTTCTCCCGCTCCATC
TCCGTCCGCCGACGTCTCGCTGCCGCATCCAAGGACACCGCCAGCGACAAGGGGCAAGAACAAGAATCGTCCACGGCAGC
GGGCGGAGCCGCGGAGCCCGCAGAGGAGGAAACACCTCCGGGTGAAAAAACCTCAGATGAAGTGGCGACGGAGCTTAAGG
AGGTGATGCGTGCGCGTAAGGAGGCGGAGGTCGCCAGGGGCGGCGGTGGGTGGTGGGCCGGGGTGGCGCAGGAGATGACG
GAGATCGAGTGGCCGGCGCCGGGGAAGGTTCTGGGCACCACGGGGGTCGTCCTCGGGATCATCGCGGGATCCACGGTCGC
GCTGCTCTCCGTGAACGCGATCCTCGCCGAGCTCTCCGACCGTGTCTTCGCTGGCCGGGGCCTTCAGGATTTCTTCTAAG
GGTGAAGTGGCATCAATTTGTCTCCGTTTATATTTCGAGAATTCAGATAGGCGTATTGCAAGGTTGATAGATTGAAAATG
GCTGTGTTGCTGCAAGAGAAATATGATACGCTGTTCCGCAGACAATTGCATTGTGCTAACATGTGCGTGCGATTCGGTCT
TCGGGAAAGAGTTTTGGCTGGCATTTCTGTGTTAAACTACTCTTACTCCGAGAAGAGAAACCTAGCTGAGTTT----TTA
TGTCGGTAGCACAAACAG-AGCTGGTTAATT--TACTTGATAAATCTGATAAACTTACTTGCACTTGGCAGTACTTTCTA
TTTAGTGTAGAGATTTGCTAAAGCTACGTTTCTCATCCGCACAACATTTTAGCTTAAGTTGTAACCTCGACAAGGAAACA
TCCTATATATCGTACTATTATGAAATGACAGAACAGTCTTAACAGTTAGTTCCAGCTAAACCTCTTGTCTGAAGGCGACA
TTTAATCTTGTGGGCTGATCTATCTTGTGAACCCAAGTGTATGGTCATTCTTATCTACAACCTCATTCCCGAGCAGTAAT
ATTCACAGGCAGATGATGCAATTCTTCATGACATACATGTATATTGGGTATTGAATTTCGGTGTTGGTTCCAGATCATTC
ATATTCTTTGGGTTGTCAGAATATATGGTTTTGAAGATACAATCGCCTCTCCCGACCATGGCTGATCTGTATGGCTTGGT
ATGGATTGCT-CCTGCTCTTTTTCTATGATCATGACATACATGTATATTGGGTATTAGATTTGGGTGTTGTTCCTGTATG
TTTTGGTATGGTATAGGTTCAGCTATTGGTCGTG----------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S
--S---------------------S-----------------------------S-------------------------
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----------------------S---------------------------------------------------------
----------------------------------------------------------------------------S---
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S-------------------------------------------------S-----------------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------------------------------S----
-------------------------------S------------------------------------------SSS---
----S--------------------------------------------------------------------S------
------------------------------------------------------------------S----S--------
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------------------------------------------------------------------S-------------
--------S------------------------------------------------S-------------------S--
--------S------------------------------------------S--------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_562
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--------------------------------------------------------------CCTGGTCTCGATCGTCAT
GG------------------------------------------------------------------------------
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>reverse_2555
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--------------------------------------------------------------------------ATCGCA
GCAAGGTCCTAACC----------------------------------------
