>input_sequence_77590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGGCGTCTAGAG
GTGAGAGCCAGACGGAGCGCTGCACCAGGCTCGCAGCCCAGCACTACAGCGAAAATCATGTAT----TCTGCATTACTTA
CTCCATCTCCTTCTTCTTCTTCTTCTTCTTTGCTCCCATCTTAGGTTACGTACTGATGATCAATCTTGGCTGAATGATTA
CGCTACGTAGGGTGTTGATCTCACGGATCTGGACCCGGTGGACAGCCACGCCTTCTCCTGCCGGTGGGTGGACGCCGGCG
ACAACCGGCTCTGCTTCCATGTCAACTTCAGGGCCGTCGCGGGGTCCCACGGGACACGACTCTTCTTCGCCGAGGTCCTC
GGCGACGGCCCCCCAAAGTCGGTGCAGCACTGTGTCATGCTAGGAGGACCATCCAGTACGTAATCCTAGTTC-TTTCTCT
CTTTGCGCGCCCATACATATTGAGTATGCATATATATTGACACGCTTGGTTATTTGCAACTTTGCATGCAGCTTGGTCAA
CAAACAATTGCACCTTTTGCTCCGGTATCTGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>chr7D_1_TraesCS7D01G543600
AGTGGTGAGTGCAGCCTTTTGATTGAAAAATTACATTTCAAAGTTTTAAACAATTCTGAAAAATACGCATTCACATATGG
ATATATACTAAATGTGTGAAAGTTGTAATCAGAAAATACAATGACATGTGACATGCACAAGAATGCCAAATTGCGATGTA
CTTCTCACTACAAAAATCCCCCAACAATTTTCACTTTTTTGTGTAGCTCATGTGTCACTGTATTTTCGCATGAATATTTT
CACACATGTATTGAACATCTATACGTCAGTGTGTAATTGTTTCCAGAATTTTATAAAAAATTAGATGTGGTTCTTTAACA
TTTCGAAACAACCAAGCTCTATGGAGCTTGCGCACCAAACGACTTTCCTGTAGTTGTAGCAGCAGCAAGAAGAACAATAA
CAACAATTGCTACTACAACACCACCACCAACGAGAACAACATATAAAAAATAAAATAGTAGTAGTAGTAGTAGTAGTAGT
AGTAGTAATAATTCCTTCGATCCATATTACTTGTCTTAGATTTCTCTAGATACGGAAGGAGTAATAATAATTTGGGGGCA
AACTTATTCGTTGCGTCCTACAATAACAGTTTCACTGCATGGGTTGCTCTCAAACACACACGCGCGCGCGCACACACAGA
CACACACACACATGCATGTGGATCAATGCTGGGGGCATGACGGATCATGCTCTTGAGAGGTAGCAGCATGATCGCATGAG
CGCTGAAGCGTGGCTGACCGGCGGGCATCAGCGACGCATGC-TTGGACATGCATATTGCTTCTGTCTT-GACGGGCTAAC
ACATTAACATAGC-----TTGCATGATGATAGGTGAAAAAAAATTCACACAAATCGAATGCACCTCGGTCGATCATACAC
TCGTGATGATGGGTCAATTCACCTTCACCTCACCTGTATGGCCATATATACATACTTGTTGCACTGATCCATC-------
---TCGCATCACAAGCAACTGCACTAAACCACACCAGC----------TAGCTAGCTAGCTTAGGTAATGGCGTCTAGAG
GTGAGAGCCAGACGGAGCGCTGCACCAGGCTCGCAGCCCAGCACTACAGCGAAAATCATGTAT----TCTGCATTACTTA
CTCCATCTCCTTCTTCTTCTTCTTCTTCTTTGCTCCCATCTTAGGTTACGTACTGATGATCAATCTTGGCTGAATGATTA
CGCTACGTAGGGTGTTGATCTCACGGATCTGGACCCGGTGGACAGCCACGCCTTCTCCTGCCGGTGGGTGGACGCCGGCG
ACAACCGGCTCTGCTTCCATGTCAACTTCAGGGCCGTCGCGGGGTCCCACGGGACACGACTCTTCTTCGCCGAGGTCCTC
GGCGACGGCCCCCCAAAGTCGGTGCAGCACTGTGTCATGCTAGGAGGACCATCCAGTACGTAATCCTAGTTC-TTTCTCT
CTTTGCGCGCCCATACATATTGAGTATGCATATATATTGACACGCTTGGTTATTTGCAACTTTGCATGCAGCTTGGTCAA
CAAACAATTGCACCTTTTGCTCCGGTATCTGACACCCCAAAGCAAGCGGCACCTTTGACTTTGGCCGCGAGTGAATGAAG
CACCAACCAACTTCCACTCCGAATTTCGACTATCCATGCATGCACTCCAGAATAAATTACTAGTACTCATTAGTATTACC
TTGCCGGCTTAATAAGTACAATAAAAATAAATTTAGGGTAGAAAGAGTAGTAGGCCTGCCGGCTTATAGTCAAATAAAAT
AAATTTAGGGTAGCAGAAGTAGGCTTGTTGGCTTAATAAAACAGAATAAATTTAGTGTAGAAAGAGTAGCCGTCCTGGCT
TAATAAAATAAAATAAAAATAAGACTAGACTTAATGGCTGTCTTATATAGTAATAAAGTAGTAAATAATATGCCAGCTGC
CTTAATAAAAAGTAAGAGAAGAACCTCACTTATTTTATGTAAATAAATAAGAACTTGTGTCAAATAAGTAAAAAGTGAGG
TCGCGCACTCTCTCTT------TCTCTCTCACTCTCTCTCCTAGTTGAAATGCAGTGGAGATGGACGAATTACAAAATTT
GGTTGCTGATAAAAACAGATTGA-TTTTTTTTAAATGCCATCAAATGCATTCAACAAGGCATCATAGTCAAGCACTTTGA
ATTTTTGAATACCCCTTTCCCATCTAATTGCTCGAACATACCTTGAATTTTAAGATTTGGTTTACACTTAGGAAGTTCCA
TCTGCCGGTTTCAGTTAGAAAGACTCATCCAACCCGTGTGTCACATGATACCAAGGATTTAGTGCTCACCCTCTTCAACT
TAACATAGTGCTCTCAAAAAAATGTATTGACACCAGTCAATTTT--AAAAAAATTGACAACATCAATATTTTTTAAGCTT
CTTCCCACAACTCAATATACCGACACAAATGTTGAGCATTAATGACTTCTCACAAATATTATCCAAGCAAAACTCATGGA
TGGGTTGTACTACCATGTTAATCCTGTCAAGTAAGATGGTTTCTATGTTAATCTTTATTATTGGATGTAGCATCTCACTT
G
>chr7A_531
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TACGGAAGGAGTAATAATAATTTGGGGGGA
AACTTATTCCTTGCGTC---------------------------------------------------------------
---------------------------------------------------CTTGAGAGGTAGCAGCATGATTGCATGAG
CGCTGAAGCGTGGCTGACCGGCGGGCATGACCGATGCATGCTTTGGACATGCATATTGCTTCTGTCTTTGACGGGCTAAC
ACATCGAATGCACCTGCATTGCATGATGATAGGTGAAAGAAAAGTCACACAAATCGAACGCACCTCGATCCATCATACAC
TCGTGATGATCGGTCGA-------------------TATGGCCATATATACGTACTTGTTGCACTGATCCATCGGTCGCA
CTATCGCATCACAAGCAACAGCACTAAACCACACCACACCACAGCAGGTAGCTAGCTAGCTTAGGCAATGGCGTCTAGAG
GTGAGAACCAGACGGAGCGCTGCACCAGGCTCGCAGCCCAGCACTACAGCGAAAATCATGTATATATTCTGCATTAGTTA
CTCCATCACCTTCTTCTTCTTCTTCTTCTTTGCTCCCATCTTAGC-TACGTACTGATGATCAATCTTGGCTGAATGATTA
CGTTATATAGGATGTTGATCTCACGGATCTGGACCCGGTGGACAGCCACGCCTTCTCCTGCCGGTGGGTGGACGCCGGCG
ACAACCGGCTCTGCTTCCATGTCAACTTCAGGGCCGATGCGGGGCCCCACGGGACACAACTCTTCTTCGCCGAGGTCCTC
GGCGACGGCCCCCCAAAGTCGGTGCAGCACTGTGTCATGCTAGGAGGACAATCCAGTACGTAATCCTAGTTCCTTTCTCT
CTTTGCATGCCCATACATTTTGAGTATCCATATATATTGAGACACTTGGTTATTTGCAATTTTGGATGCAGCTTGGTCAA
CAAACAATTGCACGTTTTGCTCCGGTATCTGCCACCCTAAAGCAAGCGGCACCTTTGACTTTGGCCGCAAGTGAATGAAG
CACCCACCAACTTCCACTCCGAATTTCGACTATCCATGCATGCACTCCAGAATAAATTACTAGTAG--------------
-------------------AATAAAAATAAATTTAGGGTAGAAAGACTAGGCCTGCTGGCT-----TAGTAAAATAAAAT
AAATTTAGGGTAGAAAGAGTAGGCTTGTTGGCTCAATAAAACAGAATAAATTTAGGTTAGAAAGAGTAGCCTTCCTGGCT
TAATAAACTAAAACAAAAATAAGACTAGACTTGATGGCTGTCTTATA--GTAATAAAGTAGTAAATAATATGTCAGCTGC
CTTAATAAAAAATAAGAGCAGAGCCTCACTTATTTTATGTAAATAAATAAGAAGTTGTGTCAAATAAGTAAAAAGTGATG
TCCTGCACTCTCTTCCTCTTTCTCTCTCTCACTCTCTCTCTTAGTTGAAATGCAGTGGCGATGGACGAATTACAAAATT-
GGTTGCTGATAAAAACAGATTGATTTTTTTTTAAATGCCATCAAATGCATTCAACAAGGCATCGTAGTCAAGCACTTTGA
ATTTTTGAATACCCCTTTCCCATCT-ATTGCTCTAACATACCTTGAATTTTAAGATTTGGTTTACACTTAGGAAGTTCCA
TCTCCCAGTTTCAGTTAGAAAGACGCATCCAACCCGTGTGTCACGTGATACCAAGGATTTAGTGCTCATCCTCTTCAAGT
TAACATAGTGCTCTCAAAAATATGTATTGACACCAGTCAATTTTTAAAAAAAATTGACAACATCAATATTTTTTAAGCTT
CTTCCCACAACTCAGTATACCGACACAAATGTTGAGCATTAATGACTTCTCACAAATATTATCCAAGCAAAACTCATGGA
TGGGTTGTACTACCATGTTAATCCTGTCAAGTAAGATGGTTTCTATGTTAATCTTTATTATTGGATGTAGCATCTCACTT
G
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S-
---------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-------
----------------------------S-S---S---------------------------------------------
----SS-SSSSS--------------------------S----S--------------S--------S--S---------
----------S----S-SSSSSSSSSSSSSSSSSSS---------------S----------------------------
-------------------S----------------SS---------------------------S--------------
------S---------------------------------------------------------------------S---
-------S------------------------------------SS----------------------------------
--S--SS----S--------------------------------------------------------------------
------------------------------------SS------S------------S----------------------
-------------------------------------------------S------------------------------
------SS----------S--------S------------S--S---------------S----S---------------
-------------S-----------------S-----S------------------------------S-----------
----S------------------------------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS---------------------------S---SSSSS---S-SSSSSS----S---------
-------------S-SS----------------S---------------------SS--------------S--------
-------S-----S------------------S--------------SS-----------------------S-------
-----------S------S---S------------------------------S------------------------S-
--SS---------SSS------------------------S-----------------S--------------------S
---------------------------------------------------------------S----------------
-------------------------S-------S----------------------------------------------
---S--S-----------------S-------------------S-----------------------S---------S-
--------------------S-----------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_21
-GTGGTGAGTGCAGCCTTTTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_1338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GACTCTTCTTCGCCGAGGTC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>forward_370
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CGCACCAAACGACTTTCCTG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
>reverse_2265
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCATCCAACCCGTGTGTCAC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-
